HEADER TRANSFERASE 17-JUL-08 3DU8 TITLE CRYSTAL STRUCTURE OF GSK-3 BETA IN COMPLEX WITH NMS-869553A COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GSK-3 BETA; COMPND 5 EC: 2.7.11.26; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: GSK3B; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PBAC2 KEYWDS PROTEIN KINASE, ALTERNATIVE SPLICING, ATP-BINDING, NUCLEOTIDE- KEYWDS 2 BINDING, PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.T.BOSSI REVDAT 3 30-AUG-23 3DU8 1 REMARK SEQADV REVDAT 2 25-OCT-17 3DU8 1 REMARK REVDAT 1 03-MAR-09 3DU8 0 JRNL AUTH M.MENICHINCHERI,A.BARGIOTTI,J.BERTHELSEN,J.A.BERTRAND, JRNL AUTH 2 R.BOSSI,A.CIAVOLELLA,A.CIRLA,C.CRISTIANI,V.CROCI, JRNL AUTH 3 R.D'ALESSIO,M.FASOLINI,F.FIORENTINI,B.FORTE,A.ISACCHI, JRNL AUTH 4 K.MARTINA,A.MOLINARI,A.MONTAGNOLI,P.ORSINI,F.ORZI,E.PESENTI, JRNL AUTH 5 D.PEZZETTA,A.PILLAN,I.POGGESI,F.ROLETTO,A.SCOLARO,M.TATO, JRNL AUTH 6 M.TIBOLLA,B.VALSASINA,M.VARASI,D.VOLPI,C.SANTOCANALE, JRNL AUTH 7 E.VANOTTI JRNL TITL FIRST CDC7 KINASE INHIBITORS: PYRROLOPYRIDINONES AS POTENT JRNL TITL 2 AND ORALLY ACTIVE ANTITUMOR AGENTS. 2. LEAD DISCOVERY. JRNL REF J.MED.CHEM. V. 52 293 2009 JRNL REFN ISSN 0022-2623 JRNL PMID 19115845 JRNL DOI 10.1021/JM800977Q REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 58807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2973 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2029 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 45.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5390 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.22000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -2.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.204 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.006 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5568 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7579 ; 1.625 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 669 ; 6.831 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;33.551 ;22.893 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 923 ;16.036 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;20.421 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 854 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4223 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2362 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3775 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 247 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.219 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.576 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3491 ; 1.101 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5541 ; 1.872 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2356 ; 2.721 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2038 ; 4.221 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DU8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048494. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0090 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58862 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 47.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1Q3D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG 3350, 100 MM HEPES PH 8.0, REMARK 280 20 MM MGCL2, 10% V/V GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.29950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.02150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.90500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.02150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.29950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.90500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 ARG A 4 REMARK 465 PRO A 5 REMARK 465 ARG A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 ALA A 11 REMARK 465 GLU A 12 REMARK 465 SER A 13 REMARK 465 CYS A 14 REMARK 465 LYS A 15 REMARK 465 PRO A 16 REMARK 465 VAL A 17 REMARK 465 GLN A 18 REMARK 465 GLN A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 PHE A 23 REMARK 465 GLY A 24 REMARK 465 SER A 25 REMARK 465 MET A 26 REMARK 465 LYS A 27 REMARK 465 VAL A 28 REMARK 465 SER A 29 REMARK 465 ARG A 30 REMARK 465 ASP A 31 REMARK 465 LYS A 32 REMARK 465 ASP A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 120 REMARK 465 GLU A 121 REMARK 465 LYS A 122 REMARK 465 LYS A 123 REMARK 465 ASP A 124 REMARK 465 GLU A 125 REMARK 465 ASN A 287 REMARK 465 TYR A 288 REMARK 465 THR A 289 REMARK 465 GLU A 290 REMARK 465 PHE A 291 REMARK 465 LYS A 292 REMARK 465 ARG A 383 REMARK 465 ILE A 384 REMARK 465 GLN A 385 REMARK 465 ALA A 386 REMARK 465 ALA A 387 REMARK 465 ALA A 388 REMARK 465 SER A 389 REMARK 465 THR A 390 REMARK 465 PRO A 391 REMARK 465 THR A 392 REMARK 465 ASN A 393 REMARK 465 ALA A 394 REMARK 465 THR A 395 REMARK 465 ALA A 396 REMARK 465 ALA A 397 REMARK 465 SER A 398 REMARK 465 ASP A 399 REMARK 465 ALA A 400 REMARK 465 ASN A 401 REMARK 465 THR A 402 REMARK 465 GLY A 403 REMARK 465 ASP A 404 REMARK 465 ARG A 405 REMARK 465 GLY A 406 REMARK 465 GLN A 407 REMARK 465 THR A 408 REMARK 465 ASN A 409 REMARK 465 ASN A 410 REMARK 465 ALA A 411 REMARK 465 ALA A 412 REMARK 465 SER A 413 REMARK 465 ALA A 414 REMARK 465 SER A 415 REMARK 465 ALA A 416 REMARK 465 SER A 417 REMARK 465 ASN A 418 REMARK 465 SER A 419 REMARK 465 THR A 420 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 ARG B 4 REMARK 465 PRO B 5 REMARK 465 ARG B 6 REMARK 465 THR B 7 REMARK 465 THR B 8 REMARK 465 SER B 9 REMARK 465 PHE B 10 REMARK 465 ALA B 11 REMARK 465 GLU B 12 REMARK 465 SER B 13 REMARK 465 CYS B 14 REMARK 465 LYS B 15 REMARK 465 PRO B 16 REMARK 465 VAL B 17 REMARK 465 GLN B 18 REMARK 465 GLN B 19 REMARK 465 PRO B 20 REMARK 465 SER B 21 REMARK 465 ALA B 22 REMARK 465 PHE B 23 REMARK 465 GLY B 24 REMARK 465 SER B 25 REMARK 465 MET B 26 REMARK 465 LYS B 27 REMARK 465 VAL B 28 REMARK 465 SER B 29 REMARK 465 ARG B 30 REMARK 465 ASP B 31 REMARK 465 LYS B 32 REMARK 465 ASP B 33 REMARK 465 GLY B 34 REMARK 465 GLY B 120 REMARK 465 GLU B 121 REMARK 465 LYS B 122 REMARK 465 LYS B 123 REMARK 465 ASP B 124 REMARK 465 GLU B 125 REMARK 465 ASN B 287 REMARK 465 TYR B 288 REMARK 465 THR B 289 REMARK 465 GLU B 290 REMARK 465 PHE B 291 REMARK 465 LYS B 292 REMARK 465 ALA B 386 REMARK 465 ALA B 387 REMARK 465 ALA B 388 REMARK 465 SER B 389 REMARK 465 THR B 390 REMARK 465 PRO B 391 REMARK 465 THR B 392 REMARK 465 ASN B 393 REMARK 465 ALA B 394 REMARK 465 THR B 395 REMARK 465 ALA B 396 REMARK 465 ALA B 397 REMARK 465 SER B 398 REMARK 465 ASP B 399 REMARK 465 ALA B 400 REMARK 465 ASN B 401 REMARK 465 THR B 402 REMARK 465 GLY B 403 REMARK 465 ASP B 404 REMARK 465 ARG B 405 REMARK 465 GLY B 406 REMARK 465 GLN B 407 REMARK 465 THR B 408 REMARK 465 ASN B 409 REMARK 465 ASN B 410 REMARK 465 ALA B 411 REMARK 465 ALA B 412 REMARK 465 SER B 413 REMARK 465 ALA B 414 REMARK 465 SER B 415 REMARK 465 ALA B 416 REMARK 465 SER B 417 REMARK 465 ASN B 418 REMARK 465 SER B 419 REMARK 465 THR B 420 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 50 O HOH A 648 4545 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 317 CB CYS B 317 SG -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 81.20 -65.50 REMARK 500 ASN A 64 17.02 -157.88 REMARK 500 ASP A 181 45.11 -147.04 REMARK 500 ASP A 200 81.45 60.76 REMARK 500 CYS A 218 142.06 82.17 REMARK 500 TYR A 221 -34.99 98.68 REMARK 500 PHE A 229 2.29 -66.43 REMARK 500 THR A 235 -162.75 -115.84 REMARK 500 SER A 237 -2.75 -57.38 REMARK 500 ASN A 285 -87.77 104.83 REMARK 500 GLN A 295 77.25 -118.87 REMARK 500 ASN A 370 68.51 -179.98 REMARK 500 ASP B 181 50.91 -146.95 REMARK 500 ALA B 194 18.18 58.29 REMARK 500 ASP B 200 78.27 64.69 REMARK 500 CYS B 218 139.39 83.98 REMARK 500 TYR B 221 -38.98 93.54 REMARK 500 PHE B 229 2.07 -63.18 REMARK 500 SER B 237 1.51 -65.47 REMARK 500 ASN B 285 -109.70 123.91 REMARK 500 ASN B 370 67.72 -170.31 REMARK 500 ARG B 383 56.81 -97.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 553 A 553 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 553 B 553 DBREF 3DU8 A 1 420 UNP P49841 GSK3B_HUMAN 1 420 DBREF 3DU8 B 1 420 UNP P49841 GSK3B_HUMAN 1 420 SEQADV 3DU8 GLY A -1 UNP P49841 EXPRESSION TAG SEQADV 3DU8 PRO A 0 UNP P49841 EXPRESSION TAG SEQADV 3DU8 GLY B -1 UNP P49841 EXPRESSION TAG SEQADV 3DU8 PRO B 0 UNP P49841 EXPRESSION TAG SEQRES 1 A 422 GLY PRO MET SER GLY ARG PRO ARG THR THR SER PHE ALA SEQRES 2 A 422 GLU SER CYS LYS PRO VAL GLN GLN PRO SER ALA PHE GLY SEQRES 3 A 422 SER MET LYS VAL SER ARG ASP LYS ASP GLY SER LYS VAL SEQRES 4 A 422 THR THR VAL VAL ALA THR PRO GLY GLN GLY PRO ASP ARG SEQRES 5 A 422 PRO GLN GLU VAL SER TYR THR ASP THR LYS VAL ILE GLY SEQRES 6 A 422 ASN GLY SER PHE GLY VAL VAL TYR GLN ALA LYS LEU CYS SEQRES 7 A 422 ASP SER GLY GLU LEU VAL ALA ILE LYS LYS VAL LEU GLN SEQRES 8 A 422 ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN ILE MET ARG SEQRES 9 A 422 LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU ARG TYR PHE SEQRES 10 A 422 PHE TYR SER SER GLY GLU LYS LYS ASP GLU VAL TYR LEU SEQRES 11 A 422 ASN LEU VAL LEU ASP TYR VAL PRO GLU THR VAL TYR ARG SEQRES 12 A 422 VAL ALA ARG HIS TYR SER ARG ALA LYS GLN THR LEU PRO SEQRES 13 A 422 VAL ILE TYR VAL LYS LEU TYR MET TYR GLN LEU PHE ARG SEQRES 14 A 422 SER LEU ALA TYR ILE HIS SER PHE GLY ILE CYS HIS ARG SEQRES 15 A 422 ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP PRO ASP THR SEQRES 16 A 422 ALA VAL LEU LYS LEU CYS ASP PHE GLY SER ALA LYS GLN SEQRES 17 A 422 LEU VAL ARG GLY GLU PRO ASN VAL SER TYR ILE CYS SER SEQRES 18 A 422 ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE GLY ALA THR SEQRES 19 A 422 ASP TYR THR SER SER ILE ASP VAL TRP SER ALA GLY CYS SEQRES 20 A 422 VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO ILE PHE PRO SEQRES 21 A 422 GLY ASP SER GLY VAL ASP GLN LEU VAL GLU ILE ILE LYS SEQRES 22 A 422 VAL LEU GLY THR PRO THR ARG GLU GLN ILE ARG GLU MET SEQRES 23 A 422 ASN PRO ASN TYR THR GLU PHE LYS PHE PRO GLN ILE LYS SEQRES 24 A 422 ALA HIS PRO TRP THR LYS VAL PHE ARG PRO ARG THR PRO SEQRES 25 A 422 PRO GLU ALA ILE ALA LEU CYS SER ARG LEU LEU GLU TYR SEQRES 26 A 422 THR PRO THR ALA ARG LEU THR PRO LEU GLU ALA CYS ALA SEQRES 27 A 422 HIS SER PHE PHE ASP GLU LEU ARG ASP PRO ASN VAL LYS SEQRES 28 A 422 LEU PRO ASN GLY ARG ASP THR PRO ALA LEU PHE ASN PHE SEQRES 29 A 422 THR THR GLN GLU LEU SER SER ASN PRO PRO LEU ALA THR SEQRES 30 A 422 ILE LEU ILE PRO PRO HIS ALA ARG ILE GLN ALA ALA ALA SEQRES 31 A 422 SER THR PRO THR ASN ALA THR ALA ALA SER ASP ALA ASN SEQRES 32 A 422 THR GLY ASP ARG GLY GLN THR ASN ASN ALA ALA SER ALA SEQRES 33 A 422 SER ALA SER ASN SER THR SEQRES 1 B 422 GLY PRO MET SER GLY ARG PRO ARG THR THR SER PHE ALA SEQRES 2 B 422 GLU SER CYS LYS PRO VAL GLN GLN PRO SER ALA PHE GLY SEQRES 3 B 422 SER MET LYS VAL SER ARG ASP LYS ASP GLY SER LYS VAL SEQRES 4 B 422 THR THR VAL VAL ALA THR PRO GLY GLN GLY PRO ASP ARG SEQRES 5 B 422 PRO GLN GLU VAL SER TYR THR ASP THR LYS VAL ILE GLY SEQRES 6 B 422 ASN GLY SER PHE GLY VAL VAL TYR GLN ALA LYS LEU CYS SEQRES 7 B 422 ASP SER GLY GLU LEU VAL ALA ILE LYS LYS VAL LEU GLN SEQRES 8 B 422 ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN ILE MET ARG SEQRES 9 B 422 LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU ARG TYR PHE SEQRES 10 B 422 PHE TYR SER SER GLY GLU LYS LYS ASP GLU VAL TYR LEU SEQRES 11 B 422 ASN LEU VAL LEU ASP TYR VAL PRO GLU THR VAL TYR ARG SEQRES 12 B 422 VAL ALA ARG HIS TYR SER ARG ALA LYS GLN THR LEU PRO SEQRES 13 B 422 VAL ILE TYR VAL LYS LEU TYR MET TYR GLN LEU PHE ARG SEQRES 14 B 422 SER LEU ALA TYR ILE HIS SER PHE GLY ILE CYS HIS ARG SEQRES 15 B 422 ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP PRO ASP THR SEQRES 16 B 422 ALA VAL LEU LYS LEU CYS ASP PHE GLY SER ALA LYS GLN SEQRES 17 B 422 LEU VAL ARG GLY GLU PRO ASN VAL SER TYR ILE CYS SER SEQRES 18 B 422 ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE GLY ALA THR SEQRES 19 B 422 ASP TYR THR SER SER ILE ASP VAL TRP SER ALA GLY CYS SEQRES 20 B 422 VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO ILE PHE PRO SEQRES 21 B 422 GLY ASP SER GLY VAL ASP GLN LEU VAL GLU ILE ILE LYS SEQRES 22 B 422 VAL LEU GLY THR PRO THR ARG GLU GLN ILE ARG GLU MET SEQRES 23 B 422 ASN PRO ASN TYR THR GLU PHE LYS PHE PRO GLN ILE LYS SEQRES 24 B 422 ALA HIS PRO TRP THR LYS VAL PHE ARG PRO ARG THR PRO SEQRES 25 B 422 PRO GLU ALA ILE ALA LEU CYS SER ARG LEU LEU GLU TYR SEQRES 26 B 422 THR PRO THR ALA ARG LEU THR PRO LEU GLU ALA CYS ALA SEQRES 27 B 422 HIS SER PHE PHE ASP GLU LEU ARG ASP PRO ASN VAL LYS SEQRES 28 B 422 LEU PRO ASN GLY ARG ASP THR PRO ALA LEU PHE ASN PHE SEQRES 29 B 422 THR THR GLN GLU LEU SER SER ASN PRO PRO LEU ALA THR SEQRES 30 B 422 ILE LEU ILE PRO PRO HIS ALA ARG ILE GLN ALA ALA ALA SEQRES 31 B 422 SER THR PRO THR ASN ALA THR ALA ALA SER ASP ALA ASN SEQRES 32 B 422 THR GLY ASP ARG GLY GLN THR ASN ASN ALA ALA SER ALA SEQRES 33 B 422 SER ALA SER ASN SER THR HET 553 A 553 20 HET 553 B 553 20 HETNAM 553 (7S)-2-(2-AMINOPYRIMIDIN-4-YL)-7-(2-FLUOROETHYL)-1,5,6, HETNAM 2 553 7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE FORMUL 3 553 2(C13 H14 F N5 O) FORMUL 5 HOH *214(H2 O) HELIX 1 1 ASN A 95 LYS A 103 1 9 HELIX 2 2 VAL A 139 ALA A 149 1 11 HELIX 3 3 PRO A 154 PHE A 175 1 22 HELIX 4 4 LYS A 183 GLN A 185 5 3 HELIX 5 5 ALA A 224 PHE A 229 1 6 HELIX 6 6 SER A 236 GLY A 253 1 18 HELIX 7 7 SER A 261 GLY A 274 1 14 HELIX 8 8 THR A 277 ASN A 285 1 9 HELIX 9 9 PRO A 300 PHE A 305 1 6 HELIX 10 10 PRO A 310 LEU A 321 1 12 HELIX 11 11 THR A 324 ARG A 328 5 5 HELIX 12 12 THR A 330 ALA A 336 1 7 HELIX 13 13 HIS A 337 ASP A 345 5 9 HELIX 14 14 THR A 363 SER A 368 1 6 HELIX 15 15 ASN A 370 PRO A 372 5 3 HELIX 16 16 LEU A 373 ILE A 378 1 6 HELIX 17 17 ASN B 95 ARG B 102 1 8 HELIX 18 18 VAL B 139 ALA B 149 1 11 HELIX 19 19 PRO B 154 PHE B 175 1 22 HELIX 20 20 LYS B 183 GLN B 185 5 3 HELIX 21 21 ALA B 224 PHE B 229 1 6 HELIX 22 22 SER B 236 GLY B 253 1 18 HELIX 23 23 SER B 261 GLY B 274 1 14 HELIX 24 24 THR B 277 ASN B 285 1 9 HELIX 25 25 PRO B 300 PHE B 305 1 6 HELIX 26 26 PRO B 310 LEU B 321 1 12 HELIX 27 27 THR B 324 ARG B 328 5 5 HELIX 28 28 THR B 330 ALA B 336 1 7 HELIX 29 29 HIS B 337 PHE B 339 5 3 HELIX 30 30 PHE B 340 ASP B 345 1 6 HELIX 31 31 THR B 363 SER B 368 1 6 HELIX 32 32 ASN B 370 PRO B 372 5 3 HELIX 33 33 LEU B 373 ILE B 378 1 6 HELIX 34 34 PRO B 379 ARG B 383 5 5 SHEET 1 A 7 VAL A 37 PRO A 44 0 SHEET 2 A 7 GLN A 52 GLY A 63 -1 O VAL A 54 N VAL A 40 SHEET 3 A 7 VAL A 69 LEU A 75 -1 O VAL A 70 N ILE A 62 SHEET 4 A 7 LEU A 81 LEU A 88 -1 O VAL A 82 N ALA A 73 SHEET 5 A 7 TYR A 127 ASP A 133 -1 O LEU A 132 N ALA A 83 SHEET 6 A 7 LEU A 112 SER A 118 -1 N SER A 118 O TYR A 127 SHEET 7 A 7 VAL A 37 PRO A 44 -1 N THR A 43 O PHE A 115 SHEET 1 B 3 GLU A 137 THR A 138 0 SHEET 2 B 3 LEU A 187 ASP A 190 -1 O LEU A 189 N GLU A 137 SHEET 3 B 3 VAL A 195 LEU A 198 -1 O VAL A 195 N ASP A 190 SHEET 1 C 2 ILE A 177 CYS A 178 0 SHEET 2 C 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 SHEET 1 D 7 THR B 38 PRO B 44 0 SHEET 2 D 7 GLN B 52 GLY B 63 -1 O GLN B 52 N ALA B 42 SHEET 3 D 7 VAL B 69 LEU B 75 -1 O VAL B 70 N ILE B 62 SHEET 4 D 7 LEU B 81 LEU B 88 -1 O LYS B 86 N VAL B 69 SHEET 5 D 7 TYR B 127 ASP B 133 -1 O LEU B 132 N ALA B 83 SHEET 6 D 7 LEU B 112 SER B 118 -1 N SER B 118 O TYR B 127 SHEET 7 D 7 THR B 38 PRO B 44 -1 N THR B 43 O PHE B 115 SHEET 1 E 3 GLU B 137 THR B 138 0 SHEET 2 E 3 LEU B 187 LEU B 189 -1 O LEU B 189 N GLU B 137 SHEET 3 E 3 LEU B 196 LEU B 198 -1 O LYS B 197 N LEU B 188 SHEET 1 F 2 ILE B 177 CYS B 178 0 SHEET 2 F 2 LYS B 205 GLN B 206 -1 O LYS B 205 N CYS B 178 SITE 1 AC1 8 PHE A 67 ALA A 83 LYS A 85 ASP A 133 SITE 2 AC1 8 TYR A 134 ASN A 186 LEU A 188 ASP A 200 SITE 1 AC2 7 ALA B 83 LYS B 85 ASP B 133 TYR B 134 SITE 2 AC2 7 ASN B 186 LEU B 188 ASP B 200 CRYST1 82.599 85.810 178.043 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012107 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005617 0.00000