HEADER VIRAL PROTEIN 18-JUL-08 3DUZ TITLE CRYSTAL STRUCTURE OF THE POSTFUSION FORM OF BACULOVIRUS TITLE 2 FUSION PROTEIN GP64 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR ENVELOPE GLYCOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-499; COMPND 5 SYNONYM: GP67; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AUTOGRAPHA CALIFORNICA NUCLEAR SOURCE 3 POLYHEDROSIS VIRUS; SOURCE 4 ORGANISM_TAXID: 46015; SOURCE 5 GENE: GP67, P67; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BACPAK6 KEYWDS FUSION PROTEIN, COILED-COIL, FUSION PEPTIDE, TRIMER, VIRAL, KEYWDS 2 GLYCOPROTEIN, LIPOPROTEIN, MEMBRANE, PALMITATE, KEYWDS 3 PHOSPHOPROTEIN, TRANSMEMBRANE, VIRION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.KADLEC,S.LOUREIRO,N.G.A.ABRESCIA,I.M.JONES,D.I.STUART REVDAT 3 24-FEB-09 3DUZ 1 VERSN REVDAT 2 04-NOV-08 3DUZ 1 JRNL REVDAT 1 16-SEP-08 3DUZ 0 JRNL AUTH J.KADLEC,S.LOUREIRO,N.G.ABRESCIA,D.I.STUART, JRNL AUTH 2 I.M.JONES JRNL TITL THE POSTFUSION STRUCTURE OF BACULOVIRUS GP64 JRNL TITL 2 SUPPORTS A UNIFIED VIEW OF VIRAL FUSION MACHINES. JRNL REF NAT.STRUCT.MOL.BIOL. V. 15 1024 2008 JRNL REFN ISSN 1545-9993 JRNL PMID 18776902 JRNL DOI 10.1038/NSMB.1484 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 12936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 657 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 982 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 42 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3360 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.00000 REMARK 3 B22 (A**2) : 2.00000 REMARK 3 B33 (A**2) : -3.00000 REMARK 3 B12 (A**2) : 1.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.416 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.290 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.969 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.902 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.846 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3430 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4638 ; 1.087 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 415 ; 6.618 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 175 ;38.975 ;25.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 625 ;17.142 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;22.621 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 506 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2587 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1242 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2286 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 91 ; 0.103 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.067 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 160 ; 0.234 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.222 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2116 ; 0.422 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3362 ; 0.774 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1470 ; 0.724 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1276 ; 1.274 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 3DUZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-08. REMARK 100 THE RCSB ID CODE IS RCSB048521. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0039, 0.8856, 1.0714, 1.0711 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13594 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 6000, 100 MM CITRIC ACID, REMARK 280 200 MM POTASSIUM SODIUM TARTRATE, PH 5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 43.73500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.25041 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 143.86333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 43.73500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.25041 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 143.86333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 43.73500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.25041 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 143.86333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 43.73500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.25041 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 143.86333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 43.73500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.25041 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 143.86333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 43.73500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.25041 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 143.86333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.50083 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 287.72667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 50.50083 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 287.72667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 50.50083 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 287.72667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 50.50083 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 287.72667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 50.50083 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 287.72667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 50.50083 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 287.72667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -532.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -43.73500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 75.75124 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -87.47000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 21 REMARK 465 VAL A 272 REMARK 465 GLU A 273 REMARK 465 HIS A 274 REMARK 465 ARG A 275 REMARK 465 VAL A 276 REMARK 465 LYS A 277 REMARK 465 LYS A 278 REMARK 465 ARG A 279 REMARK 465 PRO A 280 REMARK 465 PRO A 281 REMARK 465 THR A 282 REMARK 465 TRP A 283 REMARK 465 ARG A 284 REMARK 465 HIS A 285 REMARK 465 ASN A 286 REMARK 465 VAL A 287 REMARK 465 VAL A 394 REMARK 465 ALA A 395 REMARK 465 ASN A 396 REMARK 465 THR A 397 REMARK 465 ASP A 398 REMARK 465 VAL A 461 REMARK 465 GLY A 462 REMARK 465 THR A 463 REMARK 465 SER A 464 REMARK 465 LEU A 465 REMARK 465 SER A 466 REMARK 465 ASP A 467 REMARK 465 ILE A 468 REMARK 465 THR A 469 REMARK 465 SER A 470 REMARK 465 MET A 471 REMARK 465 ALA A 472 REMARK 465 GLU A 473 REMARK 465 GLY A 474 REMARK 465 GLU A 475 REMARK 465 LEU A 476 REMARK 465 ALA A 477 REMARK 465 ALA A 478 REMARK 465 LYS A 479 REMARK 465 LEU A 480 REMARK 465 THR A 481 REMARK 465 SER A 482 REMARK 465 PHE A 483 REMARK 465 MET A 484 REMARK 465 PHE A 485 REMARK 465 GLY A 486 REMARK 465 HIS A 487 REMARK 465 VAL A 488 REMARK 465 VAL A 489 REMARK 465 ASN A 490 REMARK 465 PHE A 491 REMARK 465 VAL A 492 REMARK 465 ILE A 493 REMARK 465 ILE A 494 REMARK 465 LEU A 495 REMARK 465 ILE A 496 REMARK 465 VAL A 497 REMARK 465 ILE A 498 REMARK 465 LEU A 499 REMARK 465 ASP A 500 REMARK 465 TYR A 501 REMARK 465 LYS A 502 REMARK 465 ASP A 503 REMARK 465 ASP A 504 REMARK 465 ASP A 505 REMARK 465 ASP A 506 REMARK 465 LYS A 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 288 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 109 50.32 38.43 REMARK 500 ASN A 150 38.51 -148.92 REMARK 500 ASN A 237 78.42 -119.68 REMARK 500 PRO A 238 7.83 -66.32 REMARK 500 PHE A 264 -113.74 48.69 REMARK 500 SER A 363 -162.77 -112.77 REMARK 500 TYR A 383 -73.62 -133.64 REMARK 500 SER A 386 78.95 -150.29 REMARK 500 ILE A 387 75.25 46.24 REMARK 500 TYR A 388 -85.68 -86.01 REMARK 500 ARG A 392 91.10 53.19 REMARK 500 GLN A 401 24.09 -77.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 1 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 3 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 5 DBREF 3DUZ A 21 499 UNP P17501 VP67_NPVAC 21 499 SEQADV 3DUZ ASP A 500 UNP P17501 EXPRESSION TAG SEQADV 3DUZ TYR A 501 UNP P17501 EXPRESSION TAG SEQADV 3DUZ LYS A 502 UNP P17501 EXPRESSION TAG SEQADV 3DUZ ASP A 503 UNP P17501 EXPRESSION TAG SEQADV 3DUZ ASP A 504 UNP P17501 EXPRESSION TAG SEQADV 3DUZ ASP A 505 UNP P17501 EXPRESSION TAG SEQADV 3DUZ ASP A 506 UNP P17501 EXPRESSION TAG SEQADV 3DUZ LYS A 507 UNP P17501 EXPRESSION TAG SEQRES 1 A 487 ALA GLU HIS CYS ASN ALA GLN MET LYS THR GLY PRO TYR SEQRES 2 A 487 LYS ILE LYS ASN LEU ASP ILE THR PRO PRO LYS GLU THR SEQRES 3 A 487 LEU GLN LYS ASP VAL GLU ILE THR ILE VAL GLU THR ASP SEQRES 4 A 487 TYR ASN GLU ASN VAL ILE ILE GLY TYR LYS GLY TYR TYR SEQRES 5 A 487 GLN ALA TYR ALA TYR ASN GLY GLY SER LEU ASP PRO ASN SEQRES 6 A 487 THR ARG VAL GLU GLU THR MET LYS THR LEU ASN VAL GLY SEQRES 7 A 487 LYS GLU ASP LEU LEU MET TRP SER ILE ARG GLN GLN CYS SEQRES 8 A 487 GLU VAL GLY GLU GLU LEU ILE ASP ARG TRP GLY SER ASP SEQRES 9 A 487 SER ASP ASP CYS PHE ARG ASP ASN GLU GLY ARG GLY GLN SEQRES 10 A 487 TRP VAL LYS GLY LYS GLU LEU VAL LYS ARG GLN ASN ASN SEQRES 11 A 487 ASN HIS PHE ALA HIS HIS THR CYS ASN LYS SER TRP ARG SEQRES 12 A 487 CYS GLY ILE SER THR SER LYS MET TYR SER ARG LEU GLU SEQRES 13 A 487 CYS GLN ASP ASP THR ASP GLU CYS GLN VAL TYR ILE LEU SEQRES 14 A 487 ASP ALA GLU GLY ASN PRO ILE ASN VAL THR VAL ASP THR SEQRES 15 A 487 VAL LEU HIS ARG ASP GLY VAL SER MET ILE LEU LYS GLN SEQRES 16 A 487 LYS SER THR PHE THR THR ARG GLN ILE LYS ALA ALA CYS SEQRES 17 A 487 LEU LEU ILE LYS ASP ASP LYS ASN ASN PRO GLU SER VAL SEQRES 18 A 487 THR ARG GLU HIS CYS LEU ILE ASP ASN ASP ILE TYR ASP SEQRES 19 A 487 LEU SER LYS ASN THR TRP ASN CYS LYS PHE ASN ARG CYS SEQRES 20 A 487 ILE LYS ARG LYS VAL GLU HIS ARG VAL LYS LYS ARG PRO SEQRES 21 A 487 PRO THR TRP ARG HIS ASN VAL ARG ALA LYS TYR THR GLU SEQRES 22 A 487 GLY ASP THR ALA THR LYS GLY ASP LEU MET HIS ILE GLN SEQRES 23 A 487 GLU GLU LEU MET TYR GLU ASN ASP LEU LEU LYS MET ASN SEQRES 24 A 487 ILE GLU LEU MET HIS ALA HIS ILE ASN LYS LEU ASN ASN SEQRES 25 A 487 MET LEU HIS ASP LEU ILE VAL SER VAL ALA LYS VAL ASP SEQRES 26 A 487 GLU ARG LEU ILE GLY ASN LEU MET ASN ASN SER VAL SER SEQRES 27 A 487 SER THR PHE LEU SER ASP ASP THR PHE LEU LEU MET PRO SEQRES 28 A 487 CYS THR ASN PRO PRO ALA HIS THR SER ASN CYS TYR ASN SEQRES 29 A 487 ASN SER ILE TYR LYS GLU GLY ARG TRP VAL ALA ASN THR SEQRES 30 A 487 ASP SER SER GLN CYS ILE ASP PHE SER ASN TYR LYS GLU SEQRES 31 A 487 LEU ALA ILE ASP ASP ASP VAL GLU PHE TRP ILE PRO THR SEQRES 32 A 487 ILE GLY ASN THR THR TYR HIS ASP SER TRP LYS ASP ALA SEQRES 33 A 487 SER GLY TRP SER PHE ILE ALA GLN GLN LYS SER ASN LEU SEQRES 34 A 487 ILE THR THR MET GLU ASN THR LYS PHE GLY GLY VAL GLY SEQRES 35 A 487 THR SER LEU SER ASP ILE THR SER MET ALA GLU GLY GLU SEQRES 36 A 487 LEU ALA ALA LYS LEU THR SER PHE MET PHE GLY HIS VAL SEQRES 37 A 487 VAL ASN PHE VAL ILE ILE LEU ILE VAL ILE LEU ASP TYR SEQRES 38 A 487 LYS ASP ASP ASP ASP LYS HET HG A 1 1 HET HG A 2 1 HET HG A 3 1 HET HG A 4 1 HET HG A 5 1 HETNAM HG MERCURY (II) ION FORMUL 2 HG 5(HG 2+) HELIX 1 1 ASN A 25 LYS A 29 5 5 HELIX 2 2 GLY A 98 GLN A 109 1 12 HELIX 3 3 SER A 123 SER A 125 5 3 HELIX 4 4 ASP A 126 ASP A 131 1 6 HELIX 5 5 THR A 298 LYS A 343 1 46 HELIX 6 6 ARG A 347 MET A 353 1 7 HELIX 7 7 SER A 432 ASP A 435 5 4 HELIX 8 8 ALA A 436 MET A 453 1 18 SHEET 1 A 6 ILE A 252 ASP A 254 0 SHEET 2 A 6 ARG A 243 LEU A 247 -1 N CYS A 246 O TYR A 253 SHEET 3 A 6 PHE A 219 ILE A 231 -1 N LEU A 229 O HIS A 245 SHEET 4 A 6 GLU A 45 THR A 58 -1 N THR A 46 O LEU A 230 SHEET 5 A 6 ARG A 266 ARG A 270 -1 O CYS A 267 N VAL A 56 SHEET 6 A 6 ASN A 261 LYS A 263 -1 N ASN A 261 O ILE A 268 SHEET 1 B 4 ARG A 87 LEU A 95 0 SHEET 2 B 4 ASN A 61 ASN A 78 -1 N GLN A 73 O THR A 91 SHEET 3 B 4 HIS A 155 CYS A 177 -1 O SER A 167 N ILE A 66 SHEET 4 B 4 CYS A 184 ILE A 188 -1 O TYR A 187 N ARG A 174 SHEET 1 C 5 LEU A 117 TRP A 121 0 SHEET 2 C 5 HIS A 155 CYS A 177 -1 O CYS A 158 N ARG A 120 SHEET 3 C 5 ASN A 61 ASN A 78 -1 N ILE A 66 O SER A 167 SHEET 4 C 5 VAL A 209 LEU A 213 -1 O SER A 210 N GLY A 67 SHEET 5 C 5 LEU A 204 ARG A 206 -1 N LEU A 204 O MET A 211 SHEET 1 D 2 CYS A 111 VAL A 113 0 SHEET 2 D 2 GLN A 137 VAL A 139 -1 O GLN A 137 N VAL A 113 SHEET 1 E 2 LYS A 146 GLN A 148 0 SHEET 2 E 2 THR A 456 PHE A 458 1 O LYS A 457 N LYS A 146 SHEET 1 F 2 VAL A 357 PHE A 361 0 SHEET 2 F 2 PHE A 367 PRO A 371 -1 O LEU A 368 N THR A 360 SSBOND 1 CYS A 111 CYS A 164 1555 1555 2.04 SSBOND 2 CYS A 128 CYS A 158 1555 1555 2.05 SSBOND 3 CYS A 177 CYS A 184 1555 1555 2.05 SSBOND 4 CYS A 228 CYS A 246 1555 1555 2.05 SSBOND 5 CYS A 262 CYS A 267 1555 1555 2.05 SSBOND 6 CYS A 382 CYS A 402 1555 1555 2.03 LINK ND1 HIS A 152 HG HG A 1 1555 1555 2.38 LINK NE2 HIS A 156 HG HG A 2 1555 1555 2.36 LINK ND1 HIS A 304 HG HG A 3 1555 1555 2.31 LINK NE2 HIS A 378 HG HG A 5 1555 1555 2.38 CISPEP 1 GLY A 31 PRO A 32 0 -6.69 SITE 1 AC1 2 TRP A 121 HIS A 152 SITE 1 AC2 2 HIS A 304 THR A 427 SITE 1 AC3 2 HIS A 378 LYS A 389 CRYST1 87.470 87.470 431.590 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011432 0.006601 0.000000 0.00000 SCALE2 0.000000 0.013201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002317 0.00000