data_3DX8 # _entry.id 3DX8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DX8 pdb_00003dx8 10.2210/pdb3dx8/pdb RCSB RCSB048602 ? ? WWPDB D_1000048602 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3DX6 unspecified . PDB 3DX7 unspecified . PDB 3DX9 unspecified . PDB 3DXA unspecified . # _pdbx_database_status.entry_id 3DX8 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-07-23 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Archbold, J.K.' 1 'Ely, L.K.' 2 'Rossjohn, J.' 3 # _citation.id primary _citation.title 'Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition.' _citation.journal_abbrev J.Exp.Med. _citation.journal_volume 206 _citation.page_first 209 _citation.page_last 219 _citation.year 2009 _citation.journal_id_ASTM JEMEAV _citation.country US _citation.journal_id_ISSN 0022-1007 _citation.journal_id_CSD 0774 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19139173 _citation.pdbx_database_id_DOI 10.1084/jem.20082136 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Archbold, J.K.' 1 ? primary 'Macdonald, W.A.' 2 ? primary 'Gras, S.' 3 ? primary 'Ely, L.K.' 4 ? primary 'Miles, J.J.' 5 ? primary 'Bell, M.J.' 6 ? primary 'Brennan, R.M.' 7 ? primary 'Beddoe, T.' 8 ? primary 'Wilce, M.C.' 9 ? primary 'Clements, C.S.' 10 ? primary 'Purcell, A.W.' 11 ? primary 'McCluskey, J.' 12 ? primary 'Burrows, S.R.' 13 ? primary 'Rossjohn, J.' 14 ? # _cell.length_a 50.776 _cell.length_b 82.351 _cell.length_c 110.138 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3DX8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3DX8 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HLA class I histocompatibility complex HLA-B*4405' 32028.348 1 ? ? ? ? 2 polymer man Beta-2-microglobulin 11748.160 1 ? ? ? ? 3 polymer syn 'EBV decapeptide epitope' 1282.421 1 ? ? 'residues 281-290' ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 223 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'HLA class I histocompatibility antigen, B-44 alpha chain ; MHC class I antigen B*44; Bw-44' 2 'Beta-2-microglobulin form pI 5.3' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYL EGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ; ;GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYL EGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ; A ? 2 'polypeptide(L)' no no ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRDM ; ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRDM ; B ? 3 'polypeptide(L)' no no EENLLDFVRF EENLLDFVRF C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 SER n 1 5 MET n 1 6 ARG n 1 7 TYR n 1 8 PHE n 1 9 TYR n 1 10 THR n 1 11 ALA n 1 12 MET n 1 13 SER n 1 14 ARG n 1 15 PRO n 1 16 GLY n 1 17 ARG n 1 18 GLY n 1 19 GLU n 1 20 PRO n 1 21 ARG n 1 22 PHE n 1 23 ILE n 1 24 THR n 1 25 VAL n 1 26 GLY n 1 27 TYR n 1 28 VAL n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 LEU n 1 33 PHE n 1 34 VAL n 1 35 ARG n 1 36 PHE n 1 37 ASP n 1 38 SER n 1 39 ASP n 1 40 ALA n 1 41 THR n 1 42 SER n 1 43 PRO n 1 44 ARG n 1 45 LYS n 1 46 GLU n 1 47 PRO n 1 48 ARG n 1 49 ALA n 1 50 PRO n 1 51 TRP n 1 52 ILE n 1 53 GLU n 1 54 GLN n 1 55 GLU n 1 56 GLY n 1 57 PRO n 1 58 GLU n 1 59 TYR n 1 60 TRP n 1 61 ASP n 1 62 ARG n 1 63 GLU n 1 64 THR n 1 65 GLN n 1 66 ILE n 1 67 SER n 1 68 LYS n 1 69 THR n 1 70 ASN n 1 71 THR n 1 72 GLN n 1 73 THR n 1 74 TYR n 1 75 ARG n 1 76 GLU n 1 77 ASN n 1 78 LEU n 1 79 ARG n 1 80 THR n 1 81 ALA n 1 82 LEU n 1 83 ARG n 1 84 TYR n 1 85 TYR n 1 86 ASN n 1 87 GLN n 1 88 SER n 1 89 GLU n 1 90 ALA n 1 91 GLY n 1 92 SER n 1 93 HIS n 1 94 ILE n 1 95 ILE n 1 96 GLN n 1 97 ARG n 1 98 MET n 1 99 TYR n 1 100 GLY n 1 101 CYS n 1 102 ASP n 1 103 VAL n 1 104 GLY n 1 105 PRO n 1 106 ASP n 1 107 GLY n 1 108 ARG n 1 109 LEU n 1 110 LEU n 1 111 ARG n 1 112 GLY n 1 113 TYR n 1 114 ASP n 1 115 GLN n 1 116 TYR n 1 117 ALA n 1 118 TYR n 1 119 ASP n 1 120 GLY n 1 121 LYS n 1 122 ASP n 1 123 TYR n 1 124 ILE n 1 125 ALA n 1 126 LEU n 1 127 ASN n 1 128 GLU n 1 129 ASP n 1 130 LEU n 1 131 SER n 1 132 SER n 1 133 TRP n 1 134 THR n 1 135 ALA n 1 136 ALA n 1 137 ASP n 1 138 THR n 1 139 ALA n 1 140 ALA n 1 141 GLN n 1 142 ILE n 1 143 THR n 1 144 GLN n 1 145 ARG n 1 146 LYS n 1 147 TRP n 1 148 GLU n 1 149 ALA n 1 150 ALA n 1 151 ARG n 1 152 VAL n 1 153 ALA n 1 154 GLU n 1 155 GLN n 1 156 ASP n 1 157 ARG n 1 158 ALA n 1 159 TYR n 1 160 LEU n 1 161 GLU n 1 162 GLY n 1 163 LEU n 1 164 CYS n 1 165 VAL n 1 166 GLU n 1 167 SER n 1 168 LEU n 1 169 ARG n 1 170 ARG n 1 171 TYR n 1 172 LEU n 1 173 GLU n 1 174 ASN n 1 175 GLY n 1 176 LYS n 1 177 GLU n 1 178 THR n 1 179 LEU n 1 180 GLN n 1 181 ARG n 1 182 ALA n 1 183 ASP n 1 184 PRO n 1 185 PRO n 1 186 LYS n 1 187 THR n 1 188 HIS n 1 189 VAL n 1 190 THR n 1 191 HIS n 1 192 HIS n 1 193 PRO n 1 194 ILE n 1 195 SER n 1 196 ASP n 1 197 HIS n 1 198 GLU n 1 199 VAL n 1 200 THR n 1 201 LEU n 1 202 ARG n 1 203 CYS n 1 204 TRP n 1 205 ALA n 1 206 LEU n 1 207 GLY n 1 208 PHE n 1 209 TYR n 1 210 PRO n 1 211 ALA n 1 212 GLU n 1 213 ILE n 1 214 THR n 1 215 LEU n 1 216 THR n 1 217 TRP n 1 218 GLN n 1 219 ARG n 1 220 ASP n 1 221 GLY n 1 222 GLU n 1 223 ASP n 1 224 GLN n 1 225 THR n 1 226 GLN n 1 227 ASP n 1 228 THR n 1 229 GLU n 1 230 LEU n 1 231 VAL n 1 232 GLU n 1 233 THR n 1 234 ARG n 1 235 PRO n 1 236 ALA n 1 237 GLY n 1 238 ASP n 1 239 ARG n 1 240 THR n 1 241 PHE n 1 242 GLN n 1 243 LYS n 1 244 TRP n 1 245 ALA n 1 246 ALA n 1 247 VAL n 1 248 VAL n 1 249 VAL n 1 250 PRO n 1 251 SER n 1 252 GLY n 1 253 GLU n 1 254 GLU n 1 255 GLN n 1 256 ARG n 1 257 TYR n 1 258 THR n 1 259 CYS n 1 260 HIS n 1 261 VAL n 1 262 GLN n 1 263 HIS n 1 264 GLU n 1 265 GLY n 1 266 LEU n 1 267 PRO n 1 268 LYS n 1 269 PRO n 1 270 LEU n 1 271 THR n 1 272 LEU n 1 273 ARG n 1 274 TRP n 1 275 GLU n 1 276 PRO n 2 1 ILE n 2 2 GLN n 2 3 ARG n 2 4 THR n 2 5 PRO n 2 6 LYS n 2 7 ILE n 2 8 GLN n 2 9 VAL n 2 10 TYR n 2 11 SER n 2 12 ARG n 2 13 HIS n 2 14 PRO n 2 15 ALA n 2 16 GLU n 2 17 ASN n 2 18 GLY n 2 19 LYS n 2 20 SER n 2 21 ASN n 2 22 PHE n 2 23 LEU n 2 24 ASN n 2 25 CYS n 2 26 TYR n 2 27 VAL n 2 28 SER n 2 29 GLY n 2 30 PHE n 2 31 HIS n 2 32 PRO n 2 33 SER n 2 34 ASP n 2 35 ILE n 2 36 GLU n 2 37 VAL n 2 38 ASP n 2 39 LEU n 2 40 LEU n 2 41 LYS n 2 42 ASN n 2 43 GLY n 2 44 GLU n 2 45 ARG n 2 46 ILE n 2 47 GLU n 2 48 LYS n 2 49 VAL n 2 50 GLU n 2 51 HIS n 2 52 SER n 2 53 ASP n 2 54 LEU n 2 55 SER n 2 56 PHE n 2 57 SER n 2 58 LYS n 2 59 ASP n 2 60 TRP n 2 61 SER n 2 62 PHE n 2 63 TYR n 2 64 LEU n 2 65 LEU n 2 66 TYR n 2 67 TYR n 2 68 THR n 2 69 GLU n 2 70 PHE n 2 71 THR n 2 72 PRO n 2 73 THR n 2 74 GLU n 2 75 LYS n 2 76 ASP n 2 77 GLU n 2 78 TYR n 2 79 ALA n 2 80 CYS n 2 81 ARG n 2 82 VAL n 2 83 ASN n 2 84 HIS n 2 85 VAL n 2 86 THR n 2 87 LEU n 2 88 SER n 2 89 GLN n 2 90 PRO n 2 91 LYS n 2 92 ILE n 2 93 VAL n 2 94 LYS n 2 95 TRP n 2 96 ASP n 2 97 ARG n 2 98 ASP n 2 99 MET n 3 1 GLU n 3 2 GLU n 3 3 ASN n 3 4 LEU n 3 5 LEU n 3 6 ASP n 3 7 PHE n 3 8 VAL n 3 9 ARG n 3 10 PHE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'HLA-B, HLAB' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pET26 ? ? 2 1 sample ? ? ? human ? 'B2M, CDABP0092, HDCMA22P' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pET26 ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'sequence occurs in Human herpesvirus 4, gene EBNA6, BERF3-BERF4' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 1 UNP 1B44_HUMAN P30481 25 ;GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYL EGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ; ? 2 2 UNP B2MG_HUMAN P61769 21 ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRDM ; ? 3 3 UNP EBNA6_EBV P03204 281 EENLLDFVRF ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DX8 A 1 ? 276 ? P30481 25 ? 300 ? 1 276 2 2 3DX8 B 1 ? 99 ? P61769 21 ? 119 ? 1 99 3 3 3DX8 C 1 ? 10 ? P03204 281 ? 290 ? 1 10 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3DX8 _struct_ref_seq_dif.mon_id TYR _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 116 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P30481 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 140 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 116 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3DX8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.56 _exptl_crystal.density_percent_sol 51.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'Citrate, Ammonium Acetate, PEG 4000, pH 5.6, vapor diffusion, hanging drop, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . _exptl_crystal_grow.temp_details ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-04-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID # _reflns.entry_id 3DX8 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.100 _reflns.d_resolution_low 65.940 _reflns.number_all 26691 _reflns.number_obs 26691 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_netI_over_sigmaI ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3DX8 _refine.ls_d_res_high 2.100 _refine.ls_d_res_low 65.940 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 95.940 _refine.ls_number_reflns_obs 26568 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.197 _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.255 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1344 _refine.B_iso_mean 29.388 _refine.aniso_B[1][1] -0.780 _refine.aniso_B[2][2] -1.190 _refine.aniso_B[3][3] 1.970 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.pdbx_overall_ESU_R 0.233 _refine.pdbx_overall_ESU_R_Free 0.205 _refine.overall_SU_ML 0.128 _refine.overall_SU_B 4.628 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 86.29 _refine.B_iso_min 3.86 _refine.occupancy_max 1.00 _refine.occupancy_min 0.30 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 26691 _refine.ls_R_factor_all 0.197 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3178 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 223 _refine_hist.number_atoms_total 3413 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 65.940 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3366 0.011 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 2372 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4580 1.435 1.942 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 5689 0.907 3.002 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 402 9.507 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 188 31.698 22.926 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 561 14.761 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 38 17.084 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 466 0.102 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 3803 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 753 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 527 0.188 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 2473 0.196 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1543 0.176 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1858 0.082 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 200 0.135 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 11 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 42 0.224 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 14 0.171 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2566 2.139 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 781 0.380 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3197 2.624 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1666 3.894 7.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1377 4.959 10.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.155 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 92.860 _refine_ls_shell.number_reflns_R_work 1792 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.R_factor_R_free 0.295 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1885 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DX8 _struct.title 'Crystal Structure of B*4405 presenting a 10mer EBV epitope' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DX8 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;MHC, Glycoprotein, Glycation, Host-virus interaction, Immune response, Membrane, MHC I, Transmembrane, Pyrrolidone carboxylic acid, Disease mutation, IMMUNE SYSTEM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 49 ? GLU A 53 ? ALA A 49 GLU A 53 5 ? 5 HELX_P HELX_P2 2 GLY A 56 ? TYR A 85 ? GLY A 56 TYR A 85 1 ? 30 HELX_P HELX_P3 3 ASP A 137 ? ALA A 150 ? ASP A 137 ALA A 150 1 ? 14 HELX_P HELX_P4 4 ARG A 151 ? GLY A 162 ? ARG A 151 GLY A 162 1 ? 12 HELX_P HELX_P5 5 GLY A 162 ? GLY A 175 ? GLY A 162 GLY A 175 1 ? 14 HELX_P HELX_P6 6 GLY A 175 ? GLN A 180 ? GLY A 175 GLN A 180 1 ? 6 HELX_P HELX_P7 7 GLU A 253 ? GLN A 255 ? GLU A 253 GLN A 255 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 101 SG ? ? ? 1_555 A CYS 164 SG ? ? A CYS 101 A CYS 164 1_555 ? ? ? ? ? ? ? 2.071 ? ? disulf2 disulf ? ? A CYS 203 SG ? ? ? 1_555 A CYS 259 SG ? ? A CYS 203 A CYS 259 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 25 B CYS 80 1_555 ? ? ? ? ? ? ? 2.061 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 209 A . ? TYR 209 A PRO 210 A ? PRO 210 A 1 -0.62 2 HIS 31 B . ? HIS 31 B PRO 32 B ? PRO 32 B 1 -1.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 46 ? PRO A 47 ? GLU A 46 PRO A 47 A 2 THR A 31 ? ASP A 37 ? THR A 31 ASP A 37 A 3 ARG A 21 ? VAL A 28 ? ARG A 21 VAL A 28 A 4 HIS A 3 ? MET A 12 ? HIS A 3 MET A 12 A 5 ILE A 94 ? VAL A 103 ? ILE A 94 VAL A 103 A 6 LEU A 109 ? TYR A 118 ? LEU A 109 TYR A 118 A 7 LYS A 121 ? LEU A 126 ? LYS A 121 LEU A 126 A 8 TRP A 133 ? ALA A 135 ? TRP A 133 ALA A 135 B 1 LYS A 186 ? PRO A 193 ? LYS A 186 PRO A 193 B 2 GLU A 198 ? PHE A 208 ? GLU A 198 PHE A 208 B 3 PHE A 241 ? PRO A 250 ? PHE A 241 PRO A 250 B 4 GLU A 229 ? LEU A 230 ? GLU A 229 LEU A 230 C 1 LYS A 186 ? PRO A 193 ? LYS A 186 PRO A 193 C 2 GLU A 198 ? PHE A 208 ? GLU A 198 PHE A 208 C 3 PHE A 241 ? PRO A 250 ? PHE A 241 PRO A 250 C 4 ARG A 234 ? PRO A 235 ? ARG A 234 PRO A 235 D 1 GLU A 222 ? ASP A 223 ? GLU A 222 ASP A 223 D 2 THR A 214 ? ARG A 219 ? THR A 214 ARG A 219 D 3 TYR A 257 ? GLN A 262 ? TYR A 257 GLN A 262 D 4 LEU A 270 ? LEU A 272 ? LEU A 270 LEU A 272 E 1 LYS B 6 ? SER B 11 ? LYS B 6 SER B 11 E 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 E 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 E 4 GLU B 50 ? HIS B 51 ? GLU B 50 HIS B 51 F 1 LYS B 6 ? SER B 11 ? LYS B 6 SER B 11 F 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 F 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 F 4 SER B 55 ? PHE B 56 ? SER B 55 PHE B 56 G 1 GLU B 44 ? ARG B 45 ? GLU B 44 ARG B 45 G 2 GLU B 36 ? LYS B 41 ? GLU B 36 LYS B 41 G 3 TYR B 78 ? ASN B 83 ? TYR B 78 ASN B 83 G 4 LYS B 91 ? LYS B 94 ? LYS B 91 LYS B 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 46 ? O GLU A 46 N ARG A 35 ? N ARG A 35 A 2 3 O PHE A 33 ? O PHE A 33 N GLY A 26 ? N GLY A 26 A 3 4 O VAL A 25 ? O VAL A 25 N PHE A 8 ? N PHE A 8 A 4 5 N HIS A 3 ? N HIS A 3 O VAL A 103 ? O VAL A 103 A 5 6 N ASP A 102 ? N ASP A 102 O LEU A 110 ? O LEU A 110 A 6 7 N ASP A 114 ? N ASP A 114 O LEU A 126 ? O LEU A 126 A 7 8 N ALA A 125 ? N ALA A 125 O THR A 134 ? O THR A 134 B 1 2 N HIS A 188 ? N HIS A 188 O TRP A 204 ? O TRP A 204 B 2 3 N CYS A 203 ? N CYS A 203 O ALA A 245 ? O ALA A 245 B 3 4 O ALA A 246 ? O ALA A 246 N GLU A 229 ? N GLU A 229 C 1 2 N HIS A 188 ? N HIS A 188 O TRP A 204 ? O TRP A 204 C 2 3 N CYS A 203 ? N CYS A 203 O ALA A 245 ? O ALA A 245 C 3 4 O GLN A 242 ? O GLN A 242 N ARG A 234 ? N ARG A 234 D 1 2 O GLU A 222 ? O GLU A 222 N ARG A 219 ? N ARG A 219 D 2 3 N THR A 216 ? N THR A 216 O HIS A 260 ? O HIS A 260 D 3 4 N CYS A 259 ? N CYS A 259 O LEU A 272 ? O LEU A 272 E 1 2 N LYS B 6 ? N LYS B 6 O SER B 28 ? O SER B 28 E 2 3 N PHE B 30 ? N PHE B 30 O PHE B 62 ? O PHE B 62 E 3 4 O TYR B 67 ? O TYR B 67 N GLU B 50 ? N GLU B 50 F 1 2 N LYS B 6 ? N LYS B 6 O SER B 28 ? O SER B 28 F 2 3 N PHE B 30 ? N PHE B 30 O PHE B 62 ? O PHE B 62 F 3 4 O TYR B 63 ? O TYR B 63 N SER B 55 ? N SER B 55 G 1 2 O GLU B 44 ? O GLU B 44 N LYS B 41 ? N LYS B 41 G 2 3 N LEU B 40 ? N LEU B 40 O ALA B 79 ? O ALA B 79 G 3 4 N VAL B 82 ? N VAL B 82 O LYS B 91 ? O LYS B 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 3731 ? 5 'BINDING SITE FOR RESIDUE GOL A 3731' AC2 Software B GOL 3732 ? 4 'BINDING SITE FOR RESIDUE GOL B 3732' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TRP A 133 ? TRP A 133 . ? 1_555 ? 2 AC1 5 ALA A 135 ? ALA A 135 . ? 1_555 ? 3 AC1 5 GLN A 141 ? GLN A 141 . ? 1_555 ? 4 AC1 5 GLN A 144 ? GLN A 144 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 4127 . ? 1_555 ? 6 AC2 4 THR B 86 ? THR B 86 . ? 1_555 ? 7 AC2 4 LEU B 87 ? LEU B 87 . ? 1_555 ? 8 AC2 4 SER B 88 ? SER B 88 . ? 1_555 ? 9 AC2 4 GLN B 89 ? GLN B 89 . ? 1_555 ? # _atom_sites.entry_id 3DX8 _atom_sites.fract_transf_matrix[1][1] 0.019694 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012143 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009080 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 TRP 147 147 147 TRP TRP A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 ARG 151 151 151 ARG ARG A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 CYS 164 164 164 CYS CYS A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 TYR 171 171 171 TYR TYR A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 PRO 185 185 185 PRO PRO A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 HIS 188 188 188 HIS HIS A . n A 1 189 VAL 189 189 189 VAL VAL A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 HIS 191 191 191 HIS HIS A . n A 1 192 HIS 192 192 192 HIS HIS A . n A 1 193 PRO 193 193 193 PRO PRO A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 GLU 198 198 198 GLU GLU A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 CYS 203 203 203 CYS CYS A . n A 1 204 TRP 204 204 204 TRP TRP A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 PRO 210 210 210 PRO PRO A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 THR 214 214 214 THR THR A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 TRP 217 217 217 TRP TRP A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 ARG 219 219 219 ARG ARG A . n A 1 220 ASP 220 220 220 ASP ASP A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 ASP 223 223 223 ASP ASP A . n A 1 224 GLN 224 224 224 GLN GLN A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 GLN 226 226 226 GLN GLN A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 VAL 231 231 231 VAL VAL A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 PRO 235 235 235 PRO PRO A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 ASP 238 238 238 ASP ASP A . n A 1 239 ARG 239 239 239 ARG ARG A . n A 1 240 THR 240 240 240 THR THR A . n A 1 241 PHE 241 241 241 PHE PHE A . n A 1 242 GLN 242 242 242 GLN GLN A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 TRP 244 244 244 TRP TRP A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 VAL 247 247 247 VAL VAL A . n A 1 248 VAL 248 248 248 VAL VAL A . n A 1 249 VAL 249 249 249 VAL VAL A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 GLN 255 255 255 GLN GLN A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 TYR 257 257 257 TYR TYR A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 CYS 259 259 259 CYS CYS A . n A 1 260 HIS 260 260 260 HIS HIS A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 HIS 263 263 263 HIS HIS A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 PRO 267 267 267 PRO PRO A . n A 1 268 LYS 268 268 268 LYS LYS A . n A 1 269 PRO 269 269 269 PRO PRO A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 THR 271 271 271 THR THR A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 ARG 273 273 273 ARG ARG A . n A 1 274 TRP 274 274 274 TRP TRP A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 PRO 276 276 276 PRO PRO A . n B 2 1 ILE 1 1 1 ILE ILE B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 ARG 3 3 3 ARG ARG B . n B 2 4 THR 4 4 4 THR THR B . n B 2 5 PRO 5 5 5 PRO PRO B . n B 2 6 LYS 6 6 6 LYS LYS B . n B 2 7 ILE 7 7 7 ILE ILE B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 VAL 9 9 9 VAL VAL B . n B 2 10 TYR 10 10 10 TYR TYR B . n B 2 11 SER 11 11 11 SER SER B . n B 2 12 ARG 12 12 12 ARG ARG B . n B 2 13 HIS 13 13 13 HIS HIS B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 ALA 15 15 15 ALA ALA B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 ASN 17 17 17 ASN ASN B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 LYS 19 19 19 LYS LYS B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 ASN 21 21 21 ASN ASN B . n B 2 22 PHE 22 22 22 PHE PHE B . n B 2 23 LEU 23 23 23 LEU LEU B . n B 2 24 ASN 24 24 24 ASN ASN B . n B 2 25 CYS 25 25 25 CYS CYS B . n B 2 26 TYR 26 26 26 TYR TYR B . n B 2 27 VAL 27 27 27 VAL VAL B . n B 2 28 SER 28 28 28 SER SER B . n B 2 29 GLY 29 29 29 GLY GLY B . n B 2 30 PHE 30 30 30 PHE PHE B . n B 2 31 HIS 31 31 31 HIS HIS B . n B 2 32 PRO 32 32 32 PRO PRO B . n B 2 33 SER 33 33 33 SER SER B . n B 2 34 ASP 34 34 34 ASP ASP B . n B 2 35 ILE 35 35 35 ILE ILE B . n B 2 36 GLU 36 36 36 GLU GLU B . n B 2 37 VAL 37 37 37 VAL VAL B . n B 2 38 ASP 38 38 38 ASP ASP B . n B 2 39 LEU 39 39 39 LEU LEU B . n B 2 40 LEU 40 40 40 LEU LEU B . n B 2 41 LYS 41 41 41 LYS LYS B . n B 2 42 ASN 42 42 42 ASN ASN B . n B 2 43 GLY 43 43 43 GLY GLY B . n B 2 44 GLU 44 44 44 GLU GLU B . n B 2 45 ARG 45 45 45 ARG ARG B . n B 2 46 ILE 46 46 46 ILE ILE B . n B 2 47 GLU 47 47 47 GLU GLU B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 VAL 49 49 49 VAL VAL B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 HIS 51 51 51 HIS HIS B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 LEU 54 54 54 LEU LEU B . n B 2 55 SER 55 55 55 SER SER B . n B 2 56 PHE 56 56 56 PHE PHE B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 LYS 58 58 58 LYS LYS B . n B 2 59 ASP 59 59 59 ASP ASP B . n B 2 60 TRP 60 60 60 TRP TRP B . n B 2 61 SER 61 61 61 SER SER B . n B 2 62 PHE 62 62 62 PHE PHE B . n B 2 63 TYR 63 63 63 TYR TYR B . n B 2 64 LEU 64 64 64 LEU LEU B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 TYR 66 66 66 TYR TYR B . n B 2 67 TYR 67 67 67 TYR TYR B . n B 2 68 THR 68 68 68 THR THR B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 PHE 70 70 70 PHE PHE B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 PRO 72 72 72 PRO PRO B . n B 2 73 THR 73 73 73 THR THR B . n B 2 74 GLU 74 74 74 GLU GLU B . n B 2 75 LYS 75 75 75 LYS LYS B . n B 2 76 ASP 76 76 76 ASP ASP B . n B 2 77 GLU 77 77 77 GLU GLU B . n B 2 78 TYR 78 78 78 TYR TYR B . n B 2 79 ALA 79 79 79 ALA ALA B . n B 2 80 CYS 80 80 80 CYS CYS B . n B 2 81 ARG 81 81 81 ARG ARG B . n B 2 82 VAL 82 82 82 VAL VAL B . n B 2 83 ASN 83 83 83 ASN ASN B . n B 2 84 HIS 84 84 84 HIS HIS B . n B 2 85 VAL 85 85 85 VAL VAL B . n B 2 86 THR 86 86 86 THR THR B . n B 2 87 LEU 87 87 87 LEU LEU B . n B 2 88 SER 88 88 88 SER SER B . n B 2 89 GLN 89 89 89 GLN GLN B . n B 2 90 PRO 90 90 90 PRO PRO B . n B 2 91 LYS 91 91 91 LYS LYS B . n B 2 92 ILE 92 92 92 ILE ILE B . n B 2 93 VAL 93 93 93 VAL VAL B . n B 2 94 LYS 94 94 94 LYS LYS B . n B 2 95 TRP 95 95 95 TRP TRP B . n B 2 96 ASP 96 96 96 ASP ASP B . n B 2 97 ARG 97 97 97 ARG ARG B . n B 2 98 ASP 98 98 98 ASP ASP B . n B 2 99 MET 99 99 99 MET MET B . n C 3 1 GLU 1 1 1 GLU GLU C . n C 3 2 GLU 2 2 2 GLU GLU C . n C 3 3 ASN 3 3 3 ASN ASN C . n C 3 4 LEU 4 4 4 LEU LEU C . n C 3 5 LEU 5 5 5 LEU LEU C . n C 3 6 ASP 6 6 6 ASP ASP C . n C 3 7 PHE 7 7 7 PHE PHE C . n C 3 8 VAL 8 8 8 VAL VAL C . n C 3 9 ARG 9 9 9 ARG ARG C . n C 3 10 PHE 10 10 10 PHE PHE C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL 1 3731 3731 GOL GOL A . E 4 GOL 1 3732 3732 GOL GOL B . F 5 HOH 1 4001 4001 HOH HOH A . F 5 HOH 2 4002 4002 HOH HOH A . F 5 HOH 3 4004 4004 HOH HOH A . F 5 HOH 4 4005 4005 HOH HOH A . F 5 HOH 5 4006 4006 HOH HOH A . F 5 HOH 6 4007 4007 HOH HOH A . F 5 HOH 7 4009 4009 HOH HOH A . F 5 HOH 8 4010 4010 HOH HOH A . F 5 HOH 9 4011 4011 HOH HOH A . F 5 HOH 10 4012 4012 HOH HOH A . F 5 HOH 11 4013 4013 HOH HOH A . F 5 HOH 12 4015 4015 HOH HOH A . F 5 HOH 13 4016 4016 HOH HOH A . F 5 HOH 14 4017 4017 HOH HOH A . F 5 HOH 15 4018 4018 HOH HOH A . F 5 HOH 16 4020 4020 HOH HOH A . F 5 HOH 17 4021 4021 HOH HOH A . F 5 HOH 18 4022 4022 HOH HOH A . F 5 HOH 19 4023 4023 HOH HOH A . F 5 HOH 20 4025 4025 HOH HOH A . F 5 HOH 21 4026 4026 HOH HOH A . F 5 HOH 22 4027 4027 HOH HOH A . F 5 HOH 23 4028 4028 HOH HOH A . F 5 HOH 24 4030 4030 HOH HOH A . F 5 HOH 25 4031 4031 HOH HOH A . F 5 HOH 26 4032 4032 HOH HOH A . F 5 HOH 27 4033 4033 HOH HOH A . F 5 HOH 28 4034 4034 HOH HOH A . F 5 HOH 29 4036 4036 HOH HOH A . F 5 HOH 30 4037 4037 HOH HOH A . F 5 HOH 31 4038 4038 HOH HOH A . F 5 HOH 32 4039 4039 HOH HOH A . F 5 HOH 33 4040 4040 HOH HOH A . F 5 HOH 34 4041 4041 HOH HOH A . F 5 HOH 35 4043 4043 HOH HOH A . F 5 HOH 36 4044 4044 HOH HOH A . F 5 HOH 37 4045 4045 HOH HOH A . F 5 HOH 38 4049 4049 HOH HOH A . F 5 HOH 39 4050 4050 HOH HOH A . F 5 HOH 40 4051 4051 HOH HOH A . F 5 HOH 41 4053 4053 HOH HOH A . F 5 HOH 42 4054 4054 HOH HOH A . F 5 HOH 43 4056 4056 HOH HOH A . F 5 HOH 44 4057 4057 HOH HOH A . F 5 HOH 45 4058 4058 HOH HOH A . F 5 HOH 46 4059 4059 HOH HOH A . F 5 HOH 47 4062 4062 HOH HOH A . F 5 HOH 48 4063 4063 HOH HOH A . F 5 HOH 49 4064 4064 HOH HOH A . F 5 HOH 50 4065 4065 HOH HOH A . F 5 HOH 51 4066 4066 HOH HOH A . F 5 HOH 52 4067 4067 HOH HOH A . F 5 HOH 53 4068 4068 HOH HOH A . F 5 HOH 54 4070 4070 HOH HOH A . F 5 HOH 55 4071 4071 HOH HOH A . F 5 HOH 56 4072 4072 HOH HOH A . F 5 HOH 57 4073 4073 HOH HOH A . F 5 HOH 58 4074 4074 HOH HOH A . F 5 HOH 59 4075 4075 HOH HOH A . F 5 HOH 60 4077 4077 HOH HOH A . F 5 HOH 61 4078 4078 HOH HOH A . F 5 HOH 62 4079 4079 HOH HOH A . F 5 HOH 63 4080 4080 HOH HOH A . F 5 HOH 64 4081 4081 HOH HOH A . F 5 HOH 65 4082 4082 HOH HOH A . F 5 HOH 66 4083 4083 HOH HOH A . F 5 HOH 67 4084 4084 HOH HOH A . F 5 HOH 68 4086 4086 HOH HOH A . F 5 HOH 69 4088 4088 HOH HOH A . F 5 HOH 70 4089 4089 HOH HOH A . F 5 HOH 71 4090 4090 HOH HOH A . F 5 HOH 72 4092 4092 HOH HOH A . F 5 HOH 73 4093 4093 HOH HOH A . F 5 HOH 74 4094 4094 HOH HOH A . F 5 HOH 75 4095 4095 HOH HOH A . F 5 HOH 76 4097 4097 HOH HOH A . F 5 HOH 77 4098 4098 HOH HOH A . F 5 HOH 78 4099 4099 HOH HOH A . F 5 HOH 79 4100 4100 HOH HOH A . F 5 HOH 80 4101 4101 HOH HOH A . F 5 HOH 81 4102 4102 HOH HOH A . F 5 HOH 82 4104 4104 HOH HOH A . F 5 HOH 83 4105 4105 HOH HOH A . F 5 HOH 84 4106 4106 HOH HOH A . F 5 HOH 85 4107 4107 HOH HOH A . F 5 HOH 86 4108 4108 HOH HOH A . F 5 HOH 87 4109 4109 HOH HOH A . F 5 HOH 88 4110 4110 HOH HOH A . F 5 HOH 89 4112 4112 HOH HOH A . F 5 HOH 90 4113 4113 HOH HOH A . F 5 HOH 91 4114 4114 HOH HOH A . F 5 HOH 92 4115 4115 HOH HOH A . F 5 HOH 93 4118 4118 HOH HOH A . F 5 HOH 94 4119 4119 HOH HOH A . F 5 HOH 95 4120 4120 HOH HOH A . F 5 HOH 96 4121 4121 HOH HOH A . F 5 HOH 97 4125 4125 HOH HOH A . F 5 HOH 98 4126 4126 HOH HOH A . F 5 HOH 99 4127 4127 HOH HOH A . F 5 HOH 100 4128 4128 HOH HOH A . F 5 HOH 101 4129 4129 HOH HOH A . F 5 HOH 102 4130 4130 HOH HOH A . F 5 HOH 103 4131 4131 HOH HOH A . F 5 HOH 104 4133 4133 HOH HOH A . F 5 HOH 105 4134 4134 HOH HOH A . F 5 HOH 106 4135 4135 HOH HOH A . F 5 HOH 107 4136 4136 HOH HOH A . F 5 HOH 108 4138 4138 HOH HOH A . F 5 HOH 109 4139 4139 HOH HOH A . F 5 HOH 110 4140 4140 HOH HOH A . F 5 HOH 111 4141 4141 HOH HOH A . F 5 HOH 112 4142 4142 HOH HOH A . F 5 HOH 113 4143 4143 HOH HOH A . F 5 HOH 114 4144 4144 HOH HOH A . F 5 HOH 115 4145 4145 HOH HOH A . F 5 HOH 116 4146 4146 HOH HOH A . F 5 HOH 117 4147 4147 HOH HOH A . F 5 HOH 118 4148 4148 HOH HOH A . F 5 HOH 119 4149 4149 HOH HOH A . F 5 HOH 120 4150 4150 HOH HOH A . F 5 HOH 121 4152 4152 HOH HOH A . F 5 HOH 122 4153 4153 HOH HOH A . F 5 HOH 123 4154 4154 HOH HOH A . F 5 HOH 124 4156 4156 HOH HOH A . F 5 HOH 125 4157 4157 HOH HOH A . F 5 HOH 126 4159 4159 HOH HOH A . F 5 HOH 127 4161 4161 HOH HOH A . F 5 HOH 128 4162 4162 HOH HOH A . F 5 HOH 129 4163 4163 HOH HOH A . F 5 HOH 130 4165 4165 HOH HOH A . F 5 HOH 131 4166 4166 HOH HOH A . F 5 HOH 132 4167 4167 HOH HOH A . F 5 HOH 133 4169 4169 HOH HOH A . F 5 HOH 134 4171 4171 HOH HOH A . F 5 HOH 135 4172 4172 HOH HOH A . F 5 HOH 136 4173 4173 HOH HOH A . F 5 HOH 137 4174 4174 HOH HOH A . F 5 HOH 138 4175 4175 HOH HOH A . F 5 HOH 139 4176 4176 HOH HOH A . F 5 HOH 140 4177 4177 HOH HOH A . F 5 HOH 141 4178 4178 HOH HOH A . F 5 HOH 142 4179 4179 HOH HOH A . F 5 HOH 143 4180 4180 HOH HOH A . F 5 HOH 144 4181 4181 HOH HOH A . F 5 HOH 145 4182 4182 HOH HOH A . F 5 HOH 146 4183 4183 HOH HOH A . F 5 HOH 147 4184 4184 HOH HOH A . F 5 HOH 148 4185 4185 HOH HOH A . F 5 HOH 149 4186 4186 HOH HOH A . F 5 HOH 150 4187 4187 HOH HOH A . F 5 HOH 151 4188 4188 HOH HOH A . F 5 HOH 152 4190 4190 HOH HOH A . F 5 HOH 153 4191 4191 HOH HOH A . F 5 HOH 154 4192 4192 HOH HOH A . F 5 HOH 155 4193 4193 HOH HOH A . F 5 HOH 156 4196 4196 HOH HOH A . F 5 HOH 157 4199 4199 HOH HOH A . F 5 HOH 158 4202 4202 HOH HOH A . F 5 HOH 159 4203 4203 HOH HOH A . F 5 HOH 160 4207 4207 HOH HOH A . F 5 HOH 161 4208 4208 HOH HOH A . F 5 HOH 162 4210 4210 HOH HOH A . F 5 HOH 163 4211 4211 HOH HOH A . F 5 HOH 164 4212 4212 HOH HOH A . F 5 HOH 165 4213 4213 HOH HOH A . F 5 HOH 166 4214 4214 HOH HOH A . F 5 HOH 167 4215 4215 HOH HOH A . F 5 HOH 168 4216 4216 HOH HOH A . F 5 HOH 169 4217 4217 HOH HOH A . F 5 HOH 170 4219 4219 HOH HOH A . F 5 HOH 171 4220 4220 HOH HOH A . F 5 HOH 172 4223 4223 HOH HOH A . F 5 HOH 173 4224 4224 HOH HOH A . G 5 HOH 1 4003 4003 HOH HOH B . G 5 HOH 2 4008 4008 HOH HOH B . G 5 HOH 3 4014 4014 HOH HOH B . G 5 HOH 4 4019 4019 HOH HOH B . G 5 HOH 5 4024 4024 HOH HOH B . G 5 HOH 6 4029 4029 HOH HOH B . G 5 HOH 7 4035 4035 HOH HOH B . G 5 HOH 8 4042 4042 HOH HOH B . G 5 HOH 9 4046 4046 HOH HOH B . G 5 HOH 10 4047 4047 HOH HOH B . G 5 HOH 11 4048 4048 HOH HOH B . G 5 HOH 12 4052 4052 HOH HOH B . G 5 HOH 13 4055 4055 HOH HOH B . G 5 HOH 14 4060 4060 HOH HOH B . G 5 HOH 15 4061 4061 HOH HOH B . G 5 HOH 16 4069 4069 HOH HOH B . G 5 HOH 17 4076 4076 HOH HOH B . G 5 HOH 18 4085 4085 HOH HOH B . G 5 HOH 19 4087 4087 HOH HOH B . G 5 HOH 20 4091 4091 HOH HOH B . G 5 HOH 21 4096 4096 HOH HOH B . G 5 HOH 22 4103 4103 HOH HOH B . G 5 HOH 23 4111 4111 HOH HOH B . G 5 HOH 24 4116 4116 HOH HOH B . G 5 HOH 25 4117 4117 HOH HOH B . G 5 HOH 26 4122 4122 HOH HOH B . G 5 HOH 27 4123 4123 HOH HOH B . G 5 HOH 28 4124 4124 HOH HOH B . G 5 HOH 29 4132 4132 HOH HOH B . G 5 HOH 30 4137 4137 HOH HOH B . G 5 HOH 31 4151 4151 HOH HOH B . G 5 HOH 32 4155 4155 HOH HOH B . G 5 HOH 33 4158 4158 HOH HOH B . G 5 HOH 34 4160 4160 HOH HOH B . G 5 HOH 35 4164 4164 HOH HOH B . G 5 HOH 36 4170 4170 HOH HOH B . G 5 HOH 37 4189 4189 HOH HOH B . G 5 HOH 38 4194 4194 HOH HOH B . G 5 HOH 39 4195 4195 HOH HOH B . G 5 HOH 40 4197 4197 HOH HOH B . G 5 HOH 41 4198 4198 HOH HOH B . G 5 HOH 42 4200 4200 HOH HOH B . G 5 HOH 43 4201 4201 HOH HOH B . G 5 HOH 44 4204 4204 HOH HOH B . G 5 HOH 45 4205 4205 HOH HOH B . G 5 HOH 46 4218 4218 HOH HOH B . G 5 HOH 47 4222 4222 HOH HOH B . H 5 HOH 1 4168 4168 HOH HOH C . H 5 HOH 2 4206 4206 HOH HOH C . H 5 HOH 3 4209 4209 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4770 ? 1 MORE -17 ? 1 'SSA (A^2)' 18930 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SCALA . ? other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 1 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 2 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 DENZO . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A LEU 266 ? ? N A PRO 267 ? ? CA A PRO 267 ? ? 141.71 119.30 22.41 1.50 Y 2 1 C A LEU 266 ? ? N A PRO 267 ? ? CD A PRO 267 ? ? 110.29 128.40 -18.11 2.10 Y 3 1 C A LYS 268 ? ? N A PRO 269 ? ? CA A PRO 269 ? ? 142.15 127.00 15.15 2.40 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 14 ? ? -156.34 70.17 2 1 ASP A 29 ? ? 50.15 -128.04 3 1 GLN A 224 ? ? -111.17 50.02 4 1 ARG A 239 ? ? 90.11 -19.71 5 1 PRO A 267 ? ? 39.36 -132.85 6 1 LYS A 268 ? ? -11.32 139.19 7 1 PRO A 269 ? ? 28.59 92.63 8 1 PRO B 32 ? ? -69.89 -174.12 9 1 TRP B 60 ? ? 80.97 -4.25 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU A 266 ? ? PRO A 267 ? ? 99.21 2 1 PRO A 267 ? ? LYS A 268 ? ? 74.77 3 1 LYS A 268 ? ? PRO A 269 ? ? 68.59 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 GLYCEROL GOL 5 water HOH #