data_3DZ5 # _entry.id 3DZ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DZ5 pdb_00003dz5 10.2210/pdb3dz5/pdb RCSB RCSB048671 ? ? WWPDB D_1000048671 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1JEN . unspecified PDB 1I72 . unspecified PDB 1I7B . unspecified PDB 1I7C . unspecified PDB 1I7M . unspecified PDB 1I79 . unspecified PDB 3DZ2 . unspecified PDB 3DZ3 . unspecified PDB 3DZ4 . unspecified PDB 3DZ6 . unspecified PDB 3DZ7 . unspecified # _pdbx_database_status.entry_id 3DZ5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-07-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bale, S.' 1 'McCloskey, D.E.' 2 'Pegg, A.E.' 3 'Secrist III, J.A.' 4 'Guida, W.C.' 5 'Ealick, S.E.' 6 # _citation.id primary _citation.title ;New Insights into the Design of Inhibitors of Human S-Adenosylmethionine Decarboxylase: Studies of Adenine C8 Substitution in Structural Analogues of S-Adenosylmethionine ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 52 _citation.page_first 1388 _citation.page_last 1407 _citation.year 2009 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19209891 _citation.pdbx_database_id_DOI 10.1021/jm801126a # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McCloskey, D.E.' 1 ? primary 'Bale, S.' 2 ? primary 'Secrist III, J.A.' 3 ? primary 'Tiwari, A.' 4 ? primary 'Moss III, T.H.' 5 ? primary 'Valiyaveettil, J.' 6 ? primary 'Brooks, W.H.' 7 ? primary 'Guida, W.C.' 8 ? primary 'Pegg, A.E.' 9 ? primary 'Ealick, S.E.' 10 ? # _cell.length_a 96.778 _cell.length_b 44.458 _cell.length_c 70.554 _cell.angle_alpha 90.000 _cell.angle_beta 104.170 _cell.angle_gamma 90.000 _cell.entry_id 3DZ5 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3DZ5 _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'S-adenosylmethionine decarboxylase beta chain' 7694.577 1 4.1.1.50 ? ? ? 2 polymer man 'S-adenosylmethionine decarboxylase alpha chain' 30685.988 1 4.1.1.50 ? ? ? 3 non-polymer syn 1,4-DIAMINOBUTANE 88.151 1 ? ? ? ? 4 non-polymer syn "5'-{[2-(aminooxy)ethyl](methyl)amino}-5'-deoxy-8-methyladenosine" 353.377 1 ? ? ? ? 5 water nat water 18.015 73 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'AdoMetDC, SamDC, S-adenosylmethionine decarboxylase beta chain' 2 'AdoMetDC, SamDC, S-adenosylmethionine decarboxylase alpha chain' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSE MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSE B ? 2 'polypeptide(L)' no yes ;(PYR)SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFPN GAAYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMF NPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQKIE GFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS ; ;XSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFPNGAAY CMGRMNSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCG YSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQKIEGFKR LDCQSAMFNDYNFVFTSFAKKQQQQQS ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ALA n 1 4 ALA n 1 5 HIS n 1 6 PHE n 1 7 PHE n 1 8 GLU n 1 9 GLY n 1 10 THR n 1 11 GLU n 1 12 LYS n 1 13 LEU n 1 14 LEU n 1 15 GLU n 1 16 VAL n 1 17 TRP n 1 18 PHE n 1 19 SER n 1 20 ARG n 1 21 GLN n 1 22 GLN n 1 23 PRO n 1 24 ASP n 1 25 ALA n 1 26 ASN n 1 27 GLN n 1 28 GLY n 1 29 SER n 1 30 GLY n 1 31 ASP n 1 32 LEU n 1 33 ARG n 1 34 THR n 1 35 ILE n 1 36 PRO n 1 37 ARG n 1 38 SER n 1 39 GLU n 1 40 TRP n 1 41 ASP n 1 42 ILE n 1 43 LEU n 1 44 LEU n 1 45 LYS n 1 46 ASP n 1 47 VAL n 1 48 GLN n 1 49 CYS n 1 50 SER n 1 51 ILE n 1 52 ILE n 1 53 SER n 1 54 VAL n 1 55 THR n 1 56 LYS n 1 57 THR n 1 58 ASP n 1 59 LYS n 1 60 GLN n 1 61 GLU n 1 62 ALA n 1 63 TYR n 1 64 VAL n 1 65 LEU n 1 66 SER n 1 67 GLU n 2 1 PYR n 2 2 SER n 2 3 MET n 2 4 PHE n 2 5 VAL n 2 6 SER n 2 7 LYS n 2 8 ARG n 2 9 ARG n 2 10 PHE n 2 11 ILE n 2 12 LEU n 2 13 LYS n 2 14 THR n 2 15 CYS n 2 16 GLY n 2 17 THR n 2 18 THR n 2 19 LEU n 2 20 LEU n 2 21 LEU n 2 22 LYS n 2 23 ALA n 2 24 LEU n 2 25 VAL n 2 26 PRO n 2 27 LEU n 2 28 LEU n 2 29 LYS n 2 30 LEU n 2 31 ALA n 2 32 ARG n 2 33 ASP n 2 34 TYR n 2 35 SER n 2 36 GLY n 2 37 PHE n 2 38 ASP n 2 39 SER n 2 40 ILE n 2 41 GLN n 2 42 SER n 2 43 PHE n 2 44 PHE n 2 45 TYR n 2 46 SER n 2 47 ARG n 2 48 LYS n 2 49 ASN n 2 50 PHE n 2 51 MET n 2 52 LYS n 2 53 PRO n 2 54 SER n 2 55 HIS n 2 56 GLN n 2 57 GLY n 2 58 TYR n 2 59 PRO n 2 60 HIS n 2 61 ARG n 2 62 ASN n 2 63 PHE n 2 64 GLN n 2 65 GLU n 2 66 GLU n 2 67 ILE n 2 68 GLU n 2 69 PHE n 2 70 LEU n 2 71 ASN n 2 72 ALA n 2 73 ILE n 2 74 PHE n 2 75 PRO n 2 76 ASN n 2 77 GLY n 2 78 ALA n 2 79 ALA n 2 80 TYR n 2 81 CYS n 2 82 MET n 2 83 GLY n 2 84 ARG n 2 85 MET n 2 86 ASN n 2 87 SER n 2 88 ASP n 2 89 CYS n 2 90 TRP n 2 91 TYR n 2 92 LEU n 2 93 TYR n 2 94 THR n 2 95 LEU n 2 96 ASP n 2 97 PHE n 2 98 PRO n 2 99 GLU n 2 100 SER n 2 101 ARG n 2 102 VAL n 2 103 ILE n 2 104 SER n 2 105 GLN n 2 106 PRO n 2 107 ASP n 2 108 GLN n 2 109 THR n 2 110 LEU n 2 111 GLU n 2 112 ILE n 2 113 LEU n 2 114 MET n 2 115 SER n 2 116 GLU n 2 117 LEU n 2 118 ASP n 2 119 PRO n 2 120 ALA n 2 121 VAL n 2 122 MET n 2 123 ASP n 2 124 GLN n 2 125 PHE n 2 126 TYR n 2 127 MET n 2 128 LYS n 2 129 ASP n 2 130 GLY n 2 131 VAL n 2 132 THR n 2 133 ALA n 2 134 LYS n 2 135 ASP n 2 136 VAL n 2 137 THR n 2 138 ARG n 2 139 GLU n 2 140 SER n 2 141 GLY n 2 142 ILE n 2 143 ARG n 2 144 ASP n 2 145 LEU n 2 146 ILE n 2 147 PRO n 2 148 GLY n 2 149 SER n 2 150 VAL n 2 151 ILE n 2 152 ASP n 2 153 ALA n 2 154 THR n 2 155 MET n 2 156 PHE n 2 157 ASN n 2 158 PRO n 2 159 CYS n 2 160 GLY n 2 161 TYR n 2 162 SER n 2 163 MET n 2 164 ASN n 2 165 GLY n 2 166 MET n 2 167 LYS n 2 168 SER n 2 169 ASP n 2 170 GLY n 2 171 THR n 2 172 TYR n 2 173 TRP n 2 174 THR n 2 175 ILE n 2 176 HIS n 2 177 ILE n 2 178 THR n 2 179 PRO n 2 180 GLU n 2 181 PRO n 2 182 GLU n 2 183 PHE n 2 184 SER n 2 185 TYR n 2 186 VAL n 2 187 SER n 2 188 PHE n 2 189 GLU n 2 190 THR n 2 191 ASN n 2 192 LEU n 2 193 SER n 2 194 GLN n 2 195 THR n 2 196 SER n 2 197 TYR n 2 198 ASP n 2 199 ASP n 2 200 LEU n 2 201 ILE n 2 202 ARG n 2 203 LYS n 2 204 VAL n 2 205 VAL n 2 206 GLU n 2 207 VAL n 2 208 PHE n 2 209 LYS n 2 210 PRO n 2 211 GLY n 2 212 LYS n 2 213 PHE n 2 214 VAL n 2 215 THR n 2 216 THR n 2 217 LEU n 2 218 PHE n 2 219 VAL n 2 220 ASN n 2 221 GLN n 2 222 SER n 2 223 SER n 2 224 LYS n 2 225 CYS n 2 226 ARG n 2 227 THR n 2 228 VAL n 2 229 LEU n 2 230 ALA n 2 231 SER n 2 232 PRO n 2 233 GLN n 2 234 LYS n 2 235 ILE n 2 236 GLU n 2 237 GLY n 2 238 PHE n 2 239 LYS n 2 240 ARG n 2 241 LEU n 2 242 ASP n 2 243 CYS n 2 244 GLN n 2 245 SER n 2 246 ALA n 2 247 MET n 2 248 PHE n 2 249 ASN n 2 250 ASP n 2 251 TYR n 2 252 ASN n 2 253 PHE n 2 254 VAL n 2 255 PHE n 2 256 THR n 2 257 SER n 2 258 PHE n 2 259 ALA n 2 260 LYS n 2 261 LYS n 2 262 GLN n 2 263 GLN n 2 264 GLN n 2 265 GLN n 2 266 GLN n 2 267 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'AMD1, AMD' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? JM109 ? ? ? ? ? ? ? plasmid ? ? ? pQE30 ? ? 2 1 sample ? ? ? human ? 'AMD1, AMD' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? JM109 ? ? ? ? ? ? ? plasmid ? ? ? pQE30 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DCAM_HUMAN P17707 1 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSE 1 ? 2 UNP DCAM_HUMAN P17707 2 ;SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFPNGAAYC MGRMNSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGY SMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQKIEGFKRL DCQSAMFNDYNFVFTSFAKKQQQQQS ; 69 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DZ5 B 1 ? 67 ? P17707 1 ? 67 ? 1 67 2 2 3DZ5 A 2 ? 267 ? P17707 69 ? 334 ? 69 334 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 3DZ5 _struct_ref_seq_dif.mon_id PYR _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P17707 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details insertion _struct_ref_seq_dif.pdbx_auth_seq_num 68 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M8M non-polymer . "5'-{[2-(aminooxy)ethyl](methyl)amino}-5'-deoxy-8-methyladenosine" ? 'C14 H23 N7 O4' 353.377 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PUT non-polymer . 1,4-DIAMINOBUTANE PUTRESCINE 'C4 H12 N2' 88.151 PYR non-polymer . 'PYRUVIC ACID' ? 'C3 H4 O3' 88.062 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3DZ5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 35.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pdbx_details '16% PEG 8000, 100 mM Tris, 10 mM DTT, pH 8.0, vapor diffusion, hanging drop, temperature 295K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2005-11-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3DZ5 _reflns.d_resolution_high 2.430 _reflns.d_resolution_low 30.000 _reflns.number_obs 10051 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_chi_squared 1.165 _reflns.pdbx_redundancy 2.500 _reflns.percent_possible_obs 93.600 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 10403 _reflns.pdbx_Rsym_value 0.090 _reflns.pdbx_netI_over_sigmaI 10.9 _reflns.B_iso_Wilson_estimate 31.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.43 _reflns_shell.d_res_low 2.52 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.338 _reflns_shell.meanI_over_sigI_obs 2.9 _reflns_shell.pdbx_Rsym_value 0.338 _reflns_shell.pdbx_chi_squared 1.107 _reflns_shell.pdbx_redundancy 1.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 950 _reflns_shell.percent_possible_all 86.80 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3DZ5 _refine.ls_d_res_high 2.430 _refine.ls_d_res_low 18.780 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF 306309.000 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.ls_percent_reflns_obs 90.300 _refine.ls_number_reflns_obs 10051 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'BULK SOLVENT MODEL USED' _refine.ls_R_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.247 _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 527 _refine.ls_R_factor_R_free_error 0.011 _refine.B_iso_mean 31.596 _refine.solvent_model_param_bsol 27.513 _refine.solvent_model_param_ksol 0.400 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] -4.110 _refine.aniso_B[2][2] 9.480 _refine.aniso_B[3][3] -5.370 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 6.070 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.pdbx_method_to_determine_struct ? _refine.B_iso_max 68.27 _refine.B_iso_min 11.17 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 10403 _refine.ls_R_factor_all 0.199 _refine.ls_R_factor_obs 0.199 _refine.ls_redundancy_reflns_obs ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 1I7B.pdb _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3DZ5 _refine_analyze.Luzzati_coordinate_error_obs 0.260 _refine_analyze.Luzzati_sigma_a_obs 0.260 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.340 _refine_analyze.Luzzati_sigma_a_free 0.310 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2423 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 2527 _refine_hist.d_res_high 2.430 _refine_hist.d_res_low 18.780 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.011 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.400 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? 25.200 ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? 1.280 ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.340 1.500 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.300 2.000 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 1.830 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.660 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.430 _refine_ls_shell.d_res_low 2.580 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 79.600 _refine_ls_shell.number_reflns_R_work 1384 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.247 _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.percent_reflns_R_free 4.700 _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.R_factor_R_free_error 0.037 _refine_ls_shell.number_reflns_all 1453 _refine_ls_shell.number_reflns_obs 950 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein.param protein.top 'X-RAY DIFFRACTION' 2 pvl.param pvl.top 'X-RAY DIFFRACTION' 3 mao.param mao.top 'X-RAY DIFFRACTION' 4 water.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 3DZ5 _struct.title ;Human AdoMetDC with covalently bound 5'-[(2-aminooxyethyl)methylamino]-5'-deoxy-8-methyladenosine ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DZ5 _struct_keywords.text ;Complexes of AdoMetDC with 8-substituted ligands, Decarboxylase, Lyase, Pyruvate, S-adenosyl-L-methionine, Spermidine biosynthesis, Zymogen, LIGASE ; _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 31 ? ILE A 35 ? ASP B 31 ILE B 35 5 ? 5 HELX_P HELX_P2 2 PRO A 36 ? GLN A 48 ? PRO B 36 GLN B 48 1 ? 13 HELX_P HELX_P3 3 LEU B 19 ? LYS B 22 ? LEU A 86 LYS A 89 5 ? 4 HELX_P HELX_P4 4 ALA B 23 ? TYR B 34 ? ALA A 90 TYR A 101 1 ? 12 HELX_P HELX_P5 5 LYS B 52 ? GLN B 56 ? LYS A 119 GLN A 123 5 ? 5 HELX_P HELX_P6 6 ASN B 62 ? PHE B 74 ? ASN A 129 PHE A 141 1 ? 13 HELX_P HELX_P7 7 ASP B 118 ? GLN B 124 ? ASP A 185 GLN A 191 1 ? 7 HELX_P HELX_P8 8 THR B 132 ? GLY B 141 ? THR A 199 GLY A 208 1 ? 10 HELX_P HELX_P9 9 ILE B 142 ? ILE B 146 ? ILE A 209 ILE A 213 5 ? 5 HELX_P HELX_P10 10 TYR B 197 ? LYS B 209 ? TYR A 264 LYS A 276 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B PYR 1 C ? ? ? 1_555 B SER 2 N ? ? A PYR 68 A SER 69 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale2 covale one ? B PYR 1 CA ? ? ? 1_555 D M8M . N1 ? ? A PYR 68 A M8M 368 1_555 ? ? ? ? ? ? ? 1.493 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 58 B . ? TYR 125 A PRO 59 B ? PRO 126 A 1 0.15 2 ASN 157 B . ? ASN 224 A PRO 158 B ? PRO 225 A 1 -0.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 50 ? LYS A 56 ? SER B 50 LYS B 56 A 2 GLU A 61 ? SER A 66 ? GLU B 61 SER B 66 A 3 MET B 3 ? VAL B 5 ? MET A 70 VAL A 72 A 4 ARG B 9 ? THR B 14 ? ARG A 76 THR A 81 A 5 LYS A 12 ? TRP A 17 ? LYS B 12 TRP B 17 A 6 SER B 42 ? LYS B 48 ? SER A 109 LYS A 115 A 7 CYS B 89 ? LEU B 95 ? CYS A 156 LEU A 162 A 8 GLY B 77 ? GLY B 83 ? GLY A 144 GLY A 150 B 1 VAL B 150 ? MET B 155 ? VAL A 217 MET A 222 B 2 TYR B 161 ? MET B 166 ? TYR A 228 MET A 233 B 3 TYR B 172 ? THR B 178 ? TYR A 239 THR A 245 B 4 TYR B 185 ? THR B 190 ? TYR A 252 THR A 257 B 5 GLN B 108 ? SER B 115 ? GLN A 175 SER A 182 B 6 LYS B 212 ? ASN B 220 ? LYS A 279 ASN A 287 B 7 TYR B 251 ? LYS B 260 ? TYR A 318 LYS A 327 B 8 PHE B 238 ? PHE B 248 ? PHE A 305 PHE A 315 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 55 ? N THR B 55 O ALA A 62 ? O ALA B 62 A 2 3 N TYR A 63 ? N TYR B 63 O MET B 3 ? O MET A 70 A 3 4 N PHE B 4 ? N PHE A 71 O ILE B 11 ? O ILE A 78 A 4 5 O THR B 14 ? O THR A 81 N LYS A 12 ? N LYS B 12 A 5 6 N LEU A 13 ? N LEU B 13 O SER B 46 ? O SER A 113 A 6 7 N ARG B 47 ? N ARG A 114 O TYR B 91 ? O TYR A 158 A 7 8 O TRP B 90 ? O TRP A 157 N MET B 82 ? N MET A 149 B 1 2 N VAL B 150 ? N VAL A 217 O MET B 166 ? O MET A 233 B 2 3 N GLY B 165 ? N GLY A 232 O TRP B 173 ? O TRP A 240 B 3 4 N THR B 178 ? N THR A 245 O TYR B 185 ? O TYR A 252 B 4 5 O VAL B 186 ? O VAL A 253 N MET B 114 ? N MET A 181 B 5 6 N LEU B 113 ? N LEU A 180 O VAL B 214 ? O VAL A 281 B 6 7 N VAL B 219 ? N VAL A 286 O ASN B 252 ? O ASN A 319 B 7 8 O PHE B 255 ? O PHE A 322 N GLN B 244 ? N GLN A 311 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B PUT 350 ? 7 'BINDING SITE FOR RESIDUE PUT B 350' AC2 Software A M8M 368 ? 17 'BINDING SITE FOR RESIDUE M8M A 368' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PHE B 44 ? PHE A 111 . ? 1_555 ? 2 AC1 7 ASP B 107 ? ASP A 174 . ? 1_555 ? 3 AC1 7 THR B 109 ? THR A 176 . ? 1_555 ? 4 AC1 7 PHE B 218 ? PHE A 285 . ? 1_555 ? 5 AC1 7 HOH F . ? HOH A 370 . ? 1_555 ? 6 AC1 7 LEU A 13 ? LEU B 13 . ? 1_555 ? 7 AC1 7 GLU A 15 ? GLU B 15 . ? 1_555 ? 8 AC2 17 PYR B 1 ? PYR A 68 . ? 1_555 ? 9 AC2 17 SER B 2 ? SER A 69 . ? 1_555 ? 10 AC2 17 PHE B 156 ? PHE A 223 . ? 1_555 ? 11 AC2 17 ASN B 157 ? ASN A 224 . ? 1_555 ? 12 AC2 17 CYS B 159 ? CYS A 226 . ? 1_555 ? 13 AC2 17 GLY B 160 ? GLY A 227 . ? 1_555 ? 14 AC2 17 TYR B 161 ? TYR A 228 . ? 1_555 ? 15 AC2 17 SER B 162 ? SER A 229 . ? 1_555 ? 16 AC2 17 HIS B 176 ? HIS A 243 . ? 1_555 ? 17 AC2 17 ILE B 177 ? ILE A 244 . ? 1_555 ? 18 AC2 17 THR B 178 ? THR A 245 . ? 1_555 ? 19 AC2 17 PRO B 179 ? PRO A 246 . ? 1_555 ? 20 AC2 17 GLU B 180 ? GLU A 247 . ? 1_555 ? 21 AC2 17 PHE A 7 ? PHE B 7 . ? 1_555 ? 22 AC2 17 LEU A 65 ? LEU B 65 . ? 1_555 ? 23 AC2 17 SER A 66 ? SER B 66 . ? 1_555 ? 24 AC2 17 GLU A 67 ? GLU B 67 . ? 1_555 ? # _database_PDB_matrix.entry_id 3DZ5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3DZ5 _atom_sites.fract_transf_matrix[1][1] 0.010333 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002609 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022493 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014618 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? B . n A 1 2 GLU 2 2 ? ? ? B . n A 1 3 ALA 3 3 ? ? ? B . n A 1 4 ALA 4 4 4 ALA ALA B . n A 1 5 HIS 5 5 5 HIS HIS B . n A 1 6 PHE 6 6 6 PHE PHE B . n A 1 7 PHE 7 7 7 PHE PHE B . n A 1 8 GLU 8 8 8 GLU GLU B . n A 1 9 GLY 9 9 9 GLY GLY B . n A 1 10 THR 10 10 10 THR THR B . n A 1 11 GLU 11 11 11 GLU GLU B . n A 1 12 LYS 12 12 12 LYS LYS B . n A 1 13 LEU 13 13 13 LEU LEU B . n A 1 14 LEU 14 14 14 LEU LEU B . n A 1 15 GLU 15 15 15 GLU GLU B . n A 1 16 VAL 16 16 16 VAL VAL B . n A 1 17 TRP 17 17 17 TRP TRP B . n A 1 18 PHE 18 18 18 PHE PHE B . n A 1 19 SER 19 19 ? ? ? B . n A 1 20 ARG 20 20 ? ? ? B . n A 1 21 GLN 21 21 ? ? ? B . n A 1 22 GLN 22 22 ? ? ? B . n A 1 23 PRO 23 23 ? ? ? B . n A 1 24 ASP 24 24 ? ? ? B . n A 1 25 ALA 25 25 ? ? ? B . n A 1 26 ASN 26 26 ? ? ? B . n A 1 27 GLN 27 27 ? ? ? B . n A 1 28 GLY 28 28 28 GLY GLY B . n A 1 29 SER 29 29 29 SER SER B . n A 1 30 GLY 30 30 30 GLY GLY B . n A 1 31 ASP 31 31 31 ASP ASP B . n A 1 32 LEU 32 32 32 LEU LEU B . n A 1 33 ARG 33 33 33 ARG ARG B . n A 1 34 THR 34 34 34 THR THR B . n A 1 35 ILE 35 35 35 ILE ILE B . n A 1 36 PRO 36 36 36 PRO PRO B . n A 1 37 ARG 37 37 37 ARG ARG B . n A 1 38 SER 38 38 38 SER SER B . n A 1 39 GLU 39 39 39 GLU GLU B . n A 1 40 TRP 40 40 40 TRP TRP B . n A 1 41 ASP 41 41 41 ASP ASP B . n A 1 42 ILE 42 42 42 ILE ILE B . n A 1 43 LEU 43 43 43 LEU LEU B . n A 1 44 LEU 44 44 44 LEU LEU B . n A 1 45 LYS 45 45 45 LYS LYS B . n A 1 46 ASP 46 46 46 ASP ASP B . n A 1 47 VAL 47 47 47 VAL VAL B . n A 1 48 GLN 48 48 48 GLN GLN B . n A 1 49 CYS 49 49 49 CYS CYS B . n A 1 50 SER 50 50 50 SER SER B . n A 1 51 ILE 51 51 51 ILE ILE B . n A 1 52 ILE 52 52 52 ILE ILE B . n A 1 53 SER 53 53 53 SER SER B . n A 1 54 VAL 54 54 54 VAL VAL B . n A 1 55 THR 55 55 55 THR THR B . n A 1 56 LYS 56 56 56 LYS LYS B . n A 1 57 THR 57 57 57 THR THR B . n A 1 58 ASP 58 58 58 ASP ASP B . n A 1 59 LYS 59 59 59 LYS LYS B . n A 1 60 GLN 60 60 60 GLN GLN B . n A 1 61 GLU 61 61 61 GLU GLU B . n A 1 62 ALA 62 62 62 ALA ALA B . n A 1 63 TYR 63 63 63 TYR TYR B . n A 1 64 VAL 64 64 64 VAL VAL B . n A 1 65 LEU 65 65 65 LEU LEU B . n A 1 66 SER 66 66 66 SER SER B . n A 1 67 GLU 67 67 67 GLU GLU B . n B 2 1 PYR 1 68 68 PYR PYR A . n B 2 2 SER 2 69 69 SER SER A . n B 2 3 MET 3 70 70 MET MET A . n B 2 4 PHE 4 71 71 PHE PHE A . n B 2 5 VAL 5 72 72 VAL VAL A . n B 2 6 SER 6 73 73 SER SER A . n B 2 7 LYS 7 74 74 LYS LYS A . n B 2 8 ARG 8 75 75 ARG ARG A . n B 2 9 ARG 9 76 76 ARG ARG A . n B 2 10 PHE 10 77 77 PHE PHE A . n B 2 11 ILE 11 78 78 ILE ILE A . n B 2 12 LEU 12 79 79 LEU LEU A . n B 2 13 LYS 13 80 80 LYS LYS A . n B 2 14 THR 14 81 81 THR THR A . n B 2 15 CYS 15 82 82 CYS CYS A . n B 2 16 GLY 16 83 83 GLY GLY A . n B 2 17 THR 17 84 84 THR THR A . n B 2 18 THR 18 85 85 THR THR A . n B 2 19 LEU 19 86 86 LEU LEU A . n B 2 20 LEU 20 87 87 LEU LEU A . n B 2 21 LEU 21 88 88 LEU LEU A . n B 2 22 LYS 22 89 89 LYS LYS A . n B 2 23 ALA 23 90 90 ALA ALA A . n B 2 24 LEU 24 91 91 LEU LEU A . n B 2 25 VAL 25 92 92 VAL VAL A . n B 2 26 PRO 26 93 93 PRO PRO A . n B 2 27 LEU 27 94 94 LEU LEU A . n B 2 28 LEU 28 95 95 LEU LEU A . n B 2 29 LYS 29 96 96 LYS LYS A . n B 2 30 LEU 30 97 97 LEU LEU A . n B 2 31 ALA 31 98 98 ALA ALA A . n B 2 32 ARG 32 99 99 ARG ARG A . n B 2 33 ASP 33 100 100 ASP ASP A . n B 2 34 TYR 34 101 101 TYR TYR A . n B 2 35 SER 35 102 102 SER SER A . n B 2 36 GLY 36 103 103 GLY GLY A . n B 2 37 PHE 37 104 104 PHE PHE A . n B 2 38 ASP 38 105 105 ASP ASP A . n B 2 39 SER 39 106 106 SER SER A . n B 2 40 ILE 40 107 107 ILE ILE A . n B 2 41 GLN 41 108 108 GLN GLN A . n B 2 42 SER 42 109 109 SER SER A . n B 2 43 PHE 43 110 110 PHE PHE A . n B 2 44 PHE 44 111 111 PHE PHE A . n B 2 45 TYR 45 112 112 TYR TYR A . n B 2 46 SER 46 113 113 SER SER A . n B 2 47 ARG 47 114 114 ARG ARG A . n B 2 48 LYS 48 115 115 LYS LYS A . n B 2 49 ASN 49 116 116 ASN ASN A . n B 2 50 PHE 50 117 117 PHE PHE A . n B 2 51 MET 51 118 118 MET MET A . n B 2 52 LYS 52 119 119 LYS LYS A . n B 2 53 PRO 53 120 120 PRO PRO A . n B 2 54 SER 54 121 121 SER SER A . n B 2 55 HIS 55 122 122 HIS HIS A . n B 2 56 GLN 56 123 123 GLN GLN A . n B 2 57 GLY 57 124 124 GLY GLY A . n B 2 58 TYR 58 125 125 TYR TYR A . n B 2 59 PRO 59 126 126 PRO PRO A . n B 2 60 HIS 60 127 127 HIS HIS A . n B 2 61 ARG 61 128 128 ARG ARG A . n B 2 62 ASN 62 129 129 ASN ASN A . n B 2 63 PHE 63 130 130 PHE PHE A . n B 2 64 GLN 64 131 131 GLN GLN A . n B 2 65 GLU 65 132 132 GLU GLU A . n B 2 66 GLU 66 133 133 GLU GLU A . n B 2 67 ILE 67 134 134 ILE ILE A . n B 2 68 GLU 68 135 135 GLU GLU A . n B 2 69 PHE 69 136 136 PHE PHE A . n B 2 70 LEU 70 137 137 LEU LEU A . n B 2 71 ASN 71 138 138 ASN ASN A . n B 2 72 ALA 72 139 139 ALA ALA A . n B 2 73 ILE 73 140 140 ILE ILE A . n B 2 74 PHE 74 141 141 PHE PHE A . n B 2 75 PRO 75 142 142 PRO PRO A . n B 2 76 ASN 76 143 143 ASN ASN A . n B 2 77 GLY 77 144 144 GLY GLY A . n B 2 78 ALA 78 145 145 ALA ALA A . n B 2 79 ALA 79 146 146 ALA ALA A . n B 2 80 TYR 80 147 147 TYR TYR A . n B 2 81 CYS 81 148 148 CYS CYS A . n B 2 82 MET 82 149 149 MET MET A . n B 2 83 GLY 83 150 150 GLY GLY A . n B 2 84 ARG 84 151 151 ARG ARG A . n B 2 85 MET 85 152 152 MET MET A . n B 2 86 ASN 86 153 153 ASN ASN A . n B 2 87 SER 87 154 154 SER SER A . n B 2 88 ASP 88 155 155 ASP ASP A . n B 2 89 CYS 89 156 156 CYS CYS A . n B 2 90 TRP 90 157 157 TRP TRP A . n B 2 91 TYR 91 158 158 TYR TYR A . n B 2 92 LEU 92 159 159 LEU LEU A . n B 2 93 TYR 93 160 160 TYR TYR A . n B 2 94 THR 94 161 161 THR THR A . n B 2 95 LEU 95 162 162 LEU LEU A . n B 2 96 ASP 96 163 163 ASP ASP A . n B 2 97 PHE 97 164 ? ? ? A . n B 2 98 PRO 98 165 ? ? ? A . n B 2 99 GLU 99 166 ? ? ? A . n B 2 100 SER 100 167 ? ? ? A . n B 2 101 ARG 101 168 ? ? ? A . n B 2 102 VAL 102 169 ? ? ? A . n B 2 103 ILE 103 170 ? ? ? A . n B 2 104 SER 104 171 171 SER SER A . n B 2 105 GLN 105 172 172 GLN GLN A . n B 2 106 PRO 106 173 173 PRO PRO A . n B 2 107 ASP 107 174 174 ASP ASP A . n B 2 108 GLN 108 175 175 GLN GLN A . n B 2 109 THR 109 176 176 THR THR A . n B 2 110 LEU 110 177 177 LEU LEU A . n B 2 111 GLU 111 178 178 GLU GLU A . n B 2 112 ILE 112 179 179 ILE ILE A . n B 2 113 LEU 113 180 180 LEU LEU A . n B 2 114 MET 114 181 181 MET MET A . n B 2 115 SER 115 182 182 SER SER A . n B 2 116 GLU 116 183 183 GLU GLU A . n B 2 117 LEU 117 184 184 LEU LEU A . n B 2 118 ASP 118 185 185 ASP ASP A . n B 2 119 PRO 119 186 186 PRO PRO A . n B 2 120 ALA 120 187 187 ALA ALA A . n B 2 121 VAL 121 188 188 VAL VAL A . n B 2 122 MET 122 189 189 MET MET A . n B 2 123 ASP 123 190 190 ASP ASP A . n B 2 124 GLN 124 191 191 GLN GLN A . n B 2 125 PHE 125 192 192 PHE PHE A . n B 2 126 TYR 126 193 193 TYR TYR A . n B 2 127 MET 127 194 194 MET MET A . n B 2 128 LYS 128 195 195 LYS LYS A . n B 2 129 ASP 129 196 196 ASP ASP A . n B 2 130 GLY 130 197 197 GLY GLY A . n B 2 131 VAL 131 198 198 VAL VAL A . n B 2 132 THR 132 199 199 THR THR A . n B 2 133 ALA 133 200 200 ALA ALA A . n B 2 134 LYS 134 201 201 LYS LYS A . n B 2 135 ASP 135 202 202 ASP ASP A . n B 2 136 VAL 136 203 203 VAL VAL A . n B 2 137 THR 137 204 204 THR THR A . n B 2 138 ARG 138 205 205 ARG ARG A . n B 2 139 GLU 139 206 206 GLU GLU A . n B 2 140 SER 140 207 207 SER SER A . n B 2 141 GLY 141 208 208 GLY GLY A . n B 2 142 ILE 142 209 209 ILE ILE A . n B 2 143 ARG 143 210 210 ARG ARG A . n B 2 144 ASP 144 211 211 ASP ASP A . n B 2 145 LEU 145 212 212 LEU LEU A . n B 2 146 ILE 146 213 213 ILE ILE A . n B 2 147 PRO 147 214 214 PRO PRO A . n B 2 148 GLY 148 215 215 GLY GLY A . n B 2 149 SER 149 216 216 SER SER A . n B 2 150 VAL 150 217 217 VAL VAL A . n B 2 151 ILE 151 218 218 ILE ILE A . n B 2 152 ASP 152 219 219 ASP ASP A . n B 2 153 ALA 153 220 220 ALA ALA A . n B 2 154 THR 154 221 221 THR THR A . n B 2 155 MET 155 222 222 MET MET A . n B 2 156 PHE 156 223 223 PHE PHE A . n B 2 157 ASN 157 224 224 ASN ASN A . n B 2 158 PRO 158 225 225 PRO PRO A . n B 2 159 CYS 159 226 226 CYS CYS A . n B 2 160 GLY 160 227 227 GLY GLY A . n B 2 161 TYR 161 228 228 TYR TYR A . n B 2 162 SER 162 229 229 SER SER A . n B 2 163 MET 163 230 230 MET MET A . n B 2 164 ASN 164 231 231 ASN ASN A . n B 2 165 GLY 165 232 232 GLY GLY A . n B 2 166 MET 166 233 233 MET MET A . n B 2 167 LYS 167 234 234 LYS LYS A . n B 2 168 SER 168 235 235 SER SER A . n B 2 169 ASP 169 236 236 ASP ASP A . n B 2 170 GLY 170 237 237 GLY GLY A . n B 2 171 THR 171 238 238 THR THR A . n B 2 172 TYR 172 239 239 TYR TYR A . n B 2 173 TRP 173 240 240 TRP TRP A . n B 2 174 THR 174 241 241 THR THR A . n B 2 175 ILE 175 242 242 ILE ILE A . n B 2 176 HIS 176 243 243 HIS HIS A . n B 2 177 ILE 177 244 244 ILE ILE A . n B 2 178 THR 178 245 245 THR THR A . n B 2 179 PRO 179 246 246 PRO PRO A . n B 2 180 GLU 180 247 247 GLU GLU A . n B 2 181 PRO 181 248 248 PRO PRO A . n B 2 182 GLU 182 249 249 GLU GLU A . n B 2 183 PHE 183 250 250 PHE PHE A . n B 2 184 SER 184 251 251 SER SER A . n B 2 185 TYR 185 252 252 TYR TYR A . n B 2 186 VAL 186 253 253 VAL VAL A . n B 2 187 SER 187 254 254 SER SER A . n B 2 188 PHE 188 255 255 PHE PHE A . n B 2 189 GLU 189 256 256 GLU GLU A . n B 2 190 THR 190 257 257 THR THR A . n B 2 191 ASN 191 258 258 ASN ASN A . n B 2 192 LEU 192 259 259 LEU LEU A . n B 2 193 SER 193 260 260 SER SER A . n B 2 194 GLN 194 261 261 GLN GLN A . n B 2 195 THR 195 262 262 THR THR A . n B 2 196 SER 196 263 263 SER SER A . n B 2 197 TYR 197 264 264 TYR TYR A . n B 2 198 ASP 198 265 265 ASP ASP A . n B 2 199 ASP 199 266 266 ASP ASP A . n B 2 200 LEU 200 267 267 LEU LEU A . n B 2 201 ILE 201 268 268 ILE ILE A . n B 2 202 ARG 202 269 269 ARG ARG A . n B 2 203 LYS 203 270 270 LYS LYS A . n B 2 204 VAL 204 271 271 VAL VAL A . n B 2 205 VAL 205 272 272 VAL VAL A . n B 2 206 GLU 206 273 273 GLU GLU A . n B 2 207 VAL 207 274 274 VAL VAL A . n B 2 208 PHE 208 275 275 PHE PHE A . n B 2 209 LYS 209 276 276 LYS LYS A . n B 2 210 PRO 210 277 277 PRO PRO A . n B 2 211 GLY 211 278 278 GLY GLY A . n B 2 212 LYS 212 279 279 LYS LYS A . n B 2 213 PHE 213 280 280 PHE PHE A . n B 2 214 VAL 214 281 281 VAL VAL A . n B 2 215 THR 215 282 282 THR THR A . n B 2 216 THR 216 283 283 THR THR A . n B 2 217 LEU 217 284 284 LEU LEU A . n B 2 218 PHE 218 285 285 PHE PHE A . n B 2 219 VAL 219 286 286 VAL VAL A . n B 2 220 ASN 220 287 287 ASN ASN A . n B 2 221 GLN 221 288 288 GLN GLN A . n B 2 222 SER 222 289 289 SER SER A . n B 2 223 SER 223 290 290 SER SER A . n B 2 224 LYS 224 291 ? ? ? A . n B 2 225 CYS 225 292 ? ? ? A . n B 2 226 ARG 226 293 ? ? ? A . n B 2 227 THR 227 294 ? ? ? A . n B 2 228 VAL 228 295 ? ? ? A . n B 2 229 LEU 229 296 ? ? ? A . n B 2 230 ALA 230 297 ? ? ? A . n B 2 231 SER 231 298 ? ? ? A . n B 2 232 PRO 232 299 ? ? ? A . n B 2 233 GLN 233 300 300 GLN GLN A . n B 2 234 LYS 234 301 301 LYS LYS A . n B 2 235 ILE 235 302 302 ILE ILE A . n B 2 236 GLU 236 303 303 GLU GLU A . n B 2 237 GLY 237 304 304 GLY GLY A . n B 2 238 PHE 238 305 305 PHE PHE A . n B 2 239 LYS 239 306 306 LYS LYS A . n B 2 240 ARG 240 307 307 ARG ARG A . n B 2 241 LEU 241 308 308 LEU LEU A . n B 2 242 ASP 242 309 309 ASP ASP A . n B 2 243 CYS 243 310 310 CYS CYS A . n B 2 244 GLN 244 311 311 GLN GLN A . n B 2 245 SER 245 312 312 SER SER A . n B 2 246 ALA 246 313 313 ALA ALA A . n B 2 247 MET 247 314 314 MET MET A . n B 2 248 PHE 248 315 315 PHE PHE A . n B 2 249 ASN 249 316 316 ASN ASN A . n B 2 250 ASP 250 317 317 ASP ASP A . n B 2 251 TYR 251 318 318 TYR TYR A . n B 2 252 ASN 252 319 319 ASN ASN A . n B 2 253 PHE 253 320 320 PHE PHE A . n B 2 254 VAL 254 321 321 VAL VAL A . n B 2 255 PHE 255 322 322 PHE PHE A . n B 2 256 THR 256 323 323 THR THR A . n B 2 257 SER 257 324 324 SER SER A . n B 2 258 PHE 258 325 325 PHE PHE A . n B 2 259 ALA 259 326 326 ALA ALA A . n B 2 260 LYS 260 327 327 LYS LYS A . n B 2 261 LYS 261 328 328 LYS LYS A . n B 2 262 GLN 262 329 ? ? ? A . n B 2 263 GLN 263 330 ? ? ? A . n B 2 264 GLN 264 331 ? ? ? A . n B 2 265 GLN 265 332 ? ? ? A . n B 2 266 GLN 266 333 ? ? ? A . n B 2 267 SER 267 334 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PUT 1 350 350 PUT PUT B . D 4 M8M 1 368 368 M8M M8M A . E 5 HOH 1 351 4 HOH HOH B . E 5 HOH 2 352 13 HOH HOH B . E 5 HOH 3 353 14 HOH HOH B . E 5 HOH 4 354 15 HOH HOH B . E 5 HOH 5 355 19 HOH HOH B . E 5 HOH 6 356 27 HOH HOH B . E 5 HOH 7 357 32 HOH HOH B . E 5 HOH 8 358 34 HOH HOH B . E 5 HOH 9 359 39 HOH HOH B . E 5 HOH 10 360 52 HOH HOH B . E 5 HOH 11 361 61 HOH HOH B . E 5 HOH 12 362 62 HOH HOH B . E 5 HOH 13 363 69 HOH HOH B . F 5 HOH 1 369 1 HOH HOH A . F 5 HOH 2 370 2 HOH HOH A . F 5 HOH 3 371 3 HOH HOH A . F 5 HOH 4 372 5 HOH HOH A . F 5 HOH 5 373 6 HOH HOH A . F 5 HOH 6 374 7 HOH HOH A . F 5 HOH 7 375 8 HOH HOH A . F 5 HOH 8 376 9 HOH HOH A . F 5 HOH 9 377 10 HOH HOH A . F 5 HOH 10 378 11 HOH HOH A . F 5 HOH 11 379 12 HOH HOH A . F 5 HOH 12 380 16 HOH HOH A . F 5 HOH 13 381 17 HOH HOH A . F 5 HOH 14 382 18 HOH HOH A . F 5 HOH 15 383 20 HOH HOH A . F 5 HOH 16 384 21 HOH HOH A . F 5 HOH 17 385 22 HOH HOH A . F 5 HOH 18 386 23 HOH HOH A . F 5 HOH 19 387 24 HOH HOH A . F 5 HOH 20 388 25 HOH HOH A . F 5 HOH 21 389 26 HOH HOH A . F 5 HOH 22 390 28 HOH HOH A . F 5 HOH 23 391 29 HOH HOH A . F 5 HOH 24 392 30 HOH HOH A . F 5 HOH 25 393 31 HOH HOH A . F 5 HOH 26 394 33 HOH HOH A . F 5 HOH 27 395 35 HOH HOH A . F 5 HOH 28 396 36 HOH HOH A . F 5 HOH 29 397 37 HOH HOH A . F 5 HOH 30 398 38 HOH HOH A . F 5 HOH 31 399 40 HOH HOH A . F 5 HOH 32 400 41 HOH HOH A . F 5 HOH 33 401 42 HOH HOH A . F 5 HOH 34 402 43 HOH HOH A . F 5 HOH 35 403 44 HOH HOH A . F 5 HOH 36 404 45 HOH HOH A . F 5 HOH 37 405 46 HOH HOH A . F 5 HOH 38 406 47 HOH HOH A . F 5 HOH 39 407 48 HOH HOH A . F 5 HOH 40 408 49 HOH HOH A . F 5 HOH 41 409 50 HOH HOH A . F 5 HOH 42 410 51 HOH HOH A . F 5 HOH 43 411 53 HOH HOH A . F 5 HOH 44 412 54 HOH HOH A . F 5 HOH 45 413 55 HOH HOH A . F 5 HOH 46 414 56 HOH HOH A . F 5 HOH 47 415 57 HOH HOH A . F 5 HOH 48 416 58 HOH HOH A . F 5 HOH 49 417 59 HOH HOH A . F 5 HOH 50 418 60 HOH HOH A . F 5 HOH 51 419 63 HOH HOH A . F 5 HOH 52 420 64 HOH HOH A . F 5 HOH 53 421 65 HOH HOH A . F 5 HOH 54 422 66 HOH HOH A . F 5 HOH 55 423 67 HOH HOH A . F 5 HOH 56 424 68 HOH HOH A . F 5 HOH 57 425 70 HOH HOH A . F 5 HOH 58 426 71 HOH HOH A . F 5 HOH 59 427 72 HOH HOH A . F 5 HOH 60 428 73 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6240 ? 1 MORE -40 ? 1 'SSA (A^2)' 13050 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Refinement description' 9 5 'Structure model' 'Atomic model' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_validate_polymer_linkage 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_validate_polymer_linkage 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_ref_seq_dif 10 4 'Structure model' struct_site 11 5 'Structure model' atom_site 12 5 'Structure model' chem_comp_atom 13 5 'Structure model' chem_comp_bond 14 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' 12 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 4 'Structure model' '_struct_ref_seq_dif.details' 14 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 17 5 'Structure model' '_atom_site.auth_atom_id' 18 5 'Structure model' '_atom_site.label_atom_id' 19 5 'Structure model' '_chem_comp_atom.atom_id' 20 5 'Structure model' '_chem_comp_bond.atom_id_1' 21 5 'Structure model' '_chem_comp_bond.atom_id_2' 22 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 CNS 1.2 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN B 48 ? ? 84.61 51.25 2 1 SER A 73 ? ? -109.35 -165.74 3 1 CYS A 82 ? ? -135.64 -142.06 4 1 LEU A 86 ? ? -102.11 67.24 5 1 PRO A 126 ? ? -98.83 32.24 6 1 SER A 154 ? ? -115.79 -140.49 7 1 PHE A 250 ? ? -145.34 44.75 8 1 LYS A 301 ? ? -107.64 -113.17 9 1 ILE A 302 ? ? 91.95 95.04 10 1 PHE A 315 ? ? -110.60 79.11 11 1 ASN A 316 ? ? 67.82 -114.23 12 1 LYS A 327 ? ? -28.13 126.37 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? A MET 1 2 1 Y 1 B GLU 2 ? A GLU 2 3 1 Y 1 B ALA 3 ? A ALA 3 4 1 Y 1 B SER 19 ? A SER 19 5 1 Y 1 B ARG 20 ? A ARG 20 6 1 Y 1 B GLN 21 ? A GLN 21 7 1 Y 1 B GLN 22 ? A GLN 22 8 1 Y 1 B PRO 23 ? A PRO 23 9 1 Y 1 B ASP 24 ? A ASP 24 10 1 Y 1 B ALA 25 ? A ALA 25 11 1 Y 1 B ASN 26 ? A ASN 26 12 1 Y 1 B GLN 27 ? A GLN 27 13 1 Y 1 A PHE 164 ? B PHE 97 14 1 Y 1 A PRO 165 ? B PRO 98 15 1 Y 1 A GLU 166 ? B GLU 99 16 1 Y 1 A SER 167 ? B SER 100 17 1 Y 1 A ARG 168 ? B ARG 101 18 1 Y 1 A VAL 169 ? B VAL 102 19 1 Y 1 A ILE 170 ? B ILE 103 20 1 Y 1 A LYS 291 ? B LYS 224 21 1 Y 1 A CYS 292 ? B CYS 225 22 1 Y 1 A ARG 293 ? B ARG 226 23 1 Y 1 A THR 294 ? B THR 227 24 1 Y 1 A VAL 295 ? B VAL 228 25 1 Y 1 A LEU 296 ? B LEU 229 26 1 Y 1 A ALA 297 ? B ALA 230 27 1 Y 1 A SER 298 ? B SER 231 28 1 Y 1 A PRO 299 ? B PRO 232 29 1 Y 1 A GLN 329 ? B GLN 262 30 1 Y 1 A GLN 330 ? B GLN 263 31 1 Y 1 A GLN 331 ? B GLN 264 32 1 Y 1 A GLN 332 ? B GLN 265 33 1 Y 1 A GLN 333 ? B GLN 266 34 1 Y 1 A SER 334 ? B SER 267 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 M8M N1 N N N 230 M8M O2 O N N 231 M8M C4 C N N 232 M8M C5 C N N 233 M8M N2 N N N 234 M8M C6 C N N 235 M8M "C5'" C N N 236 M8M "C4'" C N R 237 M8M "O4'" O N N 238 M8M "C1'" C N R 239 M8M N5 N Y N 240 M8M C11 C Y N 241 M8M N4 N Y N 242 M8M C10 C Y N 243 M8M N3 N Y N 244 M8M C9 C Y N 245 M8M N7 N N N 246 M8M C12 C Y N 247 M8M N6 N Y N 248 M8M C7 C Y N 249 M8M "C2'" C N R 250 M8M "O2'" O N N 251 M8M "C3'" C N S 252 M8M "O3'" O N N 253 M8M C8 C N N 254 M8M HN1 H N N 255 M8M HN1A H N N 256 M8M H4 H N N 257 M8M H4A H N N 258 M8M H5 H N N 259 M8M H5A H N N 260 M8M H6 H N N 261 M8M H6A H N N 262 M8M H6B H N N 263 M8M "H5'" H N N 264 M8M "H5'A" H N N 265 M8M "H4'" H N N 266 M8M "H1'" H N N 267 M8M H10 H N N 268 M8M HN7 H N N 269 M8M HN7A H N N 270 M8M "H2'" H N N 271 M8M "HO2'" H N N 272 M8M "H3'" H N N 273 M8M "HO3'" H N N 274 M8M H8 H N N 275 M8M H8A H N N 276 M8M H8B H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 PUT N2 N N N 338 PUT C4 C N N 339 PUT C3 C N N 340 PUT C2 C N N 341 PUT C1 C N N 342 PUT N1 N N N 343 PUT HN21 H N N 344 PUT HN22 H N N 345 PUT H41 H N N 346 PUT H42 H N N 347 PUT H31 H N N 348 PUT H32 H N N 349 PUT H21 H N N 350 PUT H22 H N N 351 PUT H11 H N N 352 PUT H12 H N N 353 PUT HN11 H N N 354 PUT HN12 H N N 355 PYR C C N N 356 PYR O O N N 357 PYR OXT O N N 358 PYR CA C N N 359 PYR O3 O N N 360 PYR CB C N N 361 PYR HXT H N N 362 PYR HB1 H N N 363 PYR HB2 H N N 364 PYR HB3 H N N 365 SER N N N N 366 SER CA C N S 367 SER C C N N 368 SER O O N N 369 SER CB C N N 370 SER OG O N N 371 SER OXT O N N 372 SER H H N N 373 SER H2 H N N 374 SER HA H N N 375 SER HB2 H N N 376 SER HB3 H N N 377 SER HG H N N 378 SER HXT H N N 379 THR N N N N 380 THR CA C N S 381 THR C C N N 382 THR O O N N 383 THR CB C N R 384 THR OG1 O N N 385 THR CG2 C N N 386 THR OXT O N N 387 THR H H N N 388 THR H2 H N N 389 THR HA H N N 390 THR HB H N N 391 THR HG1 H N N 392 THR HG21 H N N 393 THR HG22 H N N 394 THR HG23 H N N 395 THR HXT H N N 396 TRP N N N N 397 TRP CA C N S 398 TRP C C N N 399 TRP O O N N 400 TRP CB C N N 401 TRP CG C Y N 402 TRP CD1 C Y N 403 TRP CD2 C Y N 404 TRP NE1 N Y N 405 TRP CE2 C Y N 406 TRP CE3 C Y N 407 TRP CZ2 C Y N 408 TRP CZ3 C Y N 409 TRP CH2 C Y N 410 TRP OXT O N N 411 TRP H H N N 412 TRP H2 H N N 413 TRP HA H N N 414 TRP HB2 H N N 415 TRP HB3 H N N 416 TRP HD1 H N N 417 TRP HE1 H N N 418 TRP HE3 H N N 419 TRP HZ2 H N N 420 TRP HZ3 H N N 421 TRP HH2 H N N 422 TRP HXT H N N 423 TYR N N N N 424 TYR CA C N S 425 TYR C C N N 426 TYR O O N N 427 TYR CB C N N 428 TYR CG C Y N 429 TYR CD1 C Y N 430 TYR CD2 C Y N 431 TYR CE1 C Y N 432 TYR CE2 C Y N 433 TYR CZ C Y N 434 TYR OH O N N 435 TYR OXT O N N 436 TYR H H N N 437 TYR H2 H N N 438 TYR HA H N N 439 TYR HB2 H N N 440 TYR HB3 H N N 441 TYR HD1 H N N 442 TYR HD2 H N N 443 TYR HE1 H N N 444 TYR HE2 H N N 445 TYR HH H N N 446 TYR HXT H N N 447 VAL N N N N 448 VAL CA C N S 449 VAL C C N N 450 VAL O O N N 451 VAL CB C N N 452 VAL CG1 C N N 453 VAL CG2 C N N 454 VAL OXT O N N 455 VAL H H N N 456 VAL H2 H N N 457 VAL HA H N N 458 VAL HB H N N 459 VAL HG11 H N N 460 VAL HG12 H N N 461 VAL HG13 H N N 462 VAL HG21 H N N 463 VAL HG22 H N N 464 VAL HG23 H N N 465 VAL HXT H N N 466 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 M8M N1 O2 sing N N 218 M8M O2 C4 sing N N 219 M8M C4 C5 sing N N 220 M8M C5 N2 sing N N 221 M8M N2 C6 sing N N 222 M8M N2 "C5'" sing N N 223 M8M "C5'" "C4'" sing N N 224 M8M "C4'" "O4'" sing N N 225 M8M "C4'" "C3'" sing N N 226 M8M "O4'" "C1'" sing N N 227 M8M "C1'" N5 sing N N 228 M8M "C1'" "C2'" sing N N 229 M8M N5 C11 sing Y N 230 M8M N5 C7 sing Y N 231 M8M C11 N4 doub Y N 232 M8M C11 C12 sing Y N 233 M8M N4 C10 sing Y N 234 M8M C10 N3 doub Y N 235 M8M N3 C9 sing Y N 236 M8M C9 N7 sing N N 237 M8M C9 C12 doub Y N 238 M8M C12 N6 sing Y N 239 M8M N6 C7 doub Y N 240 M8M C7 C8 sing N N 241 M8M "C2'" "O2'" sing N N 242 M8M "C2'" "C3'" sing N N 243 M8M "C3'" "O3'" sing N N 244 M8M N1 HN1 sing N N 245 M8M N1 HN1A sing N N 246 M8M C4 H4 sing N N 247 M8M C4 H4A sing N N 248 M8M C5 H5 sing N N 249 M8M C5 H5A sing N N 250 M8M C6 H6 sing N N 251 M8M C6 H6A sing N N 252 M8M C6 H6B sing N N 253 M8M "C5'" "H5'" sing N N 254 M8M "C5'" "H5'A" sing N N 255 M8M "C4'" "H4'" sing N N 256 M8M "C1'" "H1'" sing N N 257 M8M C10 H10 sing N N 258 M8M N7 HN7 sing N N 259 M8M N7 HN7A sing N N 260 M8M "C2'" "H2'" sing N N 261 M8M "O2'" "HO2'" sing N N 262 M8M "C3'" "H3'" sing N N 263 M8M "O3'" "HO3'" sing N N 264 M8M C8 H8 sing N N 265 M8M C8 H8A sing N N 266 M8M C8 H8B sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 PUT N2 C4 sing N N 327 PUT N2 HN21 sing N N 328 PUT N2 HN22 sing N N 329 PUT C4 C3 sing N N 330 PUT C4 H41 sing N N 331 PUT C4 H42 sing N N 332 PUT C3 C2 sing N N 333 PUT C3 H31 sing N N 334 PUT C3 H32 sing N N 335 PUT C2 C1 sing N N 336 PUT C2 H21 sing N N 337 PUT C2 H22 sing N N 338 PUT C1 N1 sing N N 339 PUT C1 H11 sing N N 340 PUT C1 H12 sing N N 341 PUT N1 HN11 sing N N 342 PUT N1 HN12 sing N N 343 PYR C O doub N N 344 PYR C OXT sing N N 345 PYR C CA sing N N 346 PYR OXT HXT sing N N 347 PYR CA O3 doub N N 348 PYR CA CB sing N N 349 PYR CB HB1 sing N N 350 PYR CB HB2 sing N N 351 PYR CB HB3 sing N N 352 SER N CA sing N N 353 SER N H sing N N 354 SER N H2 sing N N 355 SER CA C sing N N 356 SER CA CB sing N N 357 SER CA HA sing N N 358 SER C O doub N N 359 SER C OXT sing N N 360 SER CB OG sing N N 361 SER CB HB2 sing N N 362 SER CB HB3 sing N N 363 SER OG HG sing N N 364 SER OXT HXT sing N N 365 THR N CA sing N N 366 THR N H sing N N 367 THR N H2 sing N N 368 THR CA C sing N N 369 THR CA CB sing N N 370 THR CA HA sing N N 371 THR C O doub N N 372 THR C OXT sing N N 373 THR CB OG1 sing N N 374 THR CB CG2 sing N N 375 THR CB HB sing N N 376 THR OG1 HG1 sing N N 377 THR CG2 HG21 sing N N 378 THR CG2 HG22 sing N N 379 THR CG2 HG23 sing N N 380 THR OXT HXT sing N N 381 TRP N CA sing N N 382 TRP N H sing N N 383 TRP N H2 sing N N 384 TRP CA C sing N N 385 TRP CA CB sing N N 386 TRP CA HA sing N N 387 TRP C O doub N N 388 TRP C OXT sing N N 389 TRP CB CG sing N N 390 TRP CB HB2 sing N N 391 TRP CB HB3 sing N N 392 TRP CG CD1 doub Y N 393 TRP CG CD2 sing Y N 394 TRP CD1 NE1 sing Y N 395 TRP CD1 HD1 sing N N 396 TRP CD2 CE2 doub Y N 397 TRP CD2 CE3 sing Y N 398 TRP NE1 CE2 sing Y N 399 TRP NE1 HE1 sing N N 400 TRP CE2 CZ2 sing Y N 401 TRP CE3 CZ3 doub Y N 402 TRP CE3 HE3 sing N N 403 TRP CZ2 CH2 doub Y N 404 TRP CZ2 HZ2 sing N N 405 TRP CZ3 CH2 sing Y N 406 TRP CZ3 HZ3 sing N N 407 TRP CH2 HH2 sing N N 408 TRP OXT HXT sing N N 409 TYR N CA sing N N 410 TYR N H sing N N 411 TYR N H2 sing N N 412 TYR CA C sing N N 413 TYR CA CB sing N N 414 TYR CA HA sing N N 415 TYR C O doub N N 416 TYR C OXT sing N N 417 TYR CB CG sing N N 418 TYR CB HB2 sing N N 419 TYR CB HB3 sing N N 420 TYR CG CD1 doub Y N 421 TYR CG CD2 sing Y N 422 TYR CD1 CE1 sing Y N 423 TYR CD1 HD1 sing N N 424 TYR CD2 CE2 doub Y N 425 TYR CD2 HD2 sing N N 426 TYR CE1 CZ doub Y N 427 TYR CE1 HE1 sing N N 428 TYR CE2 CZ sing Y N 429 TYR CE2 HE2 sing N N 430 TYR CZ OH sing N N 431 TYR OH HH sing N N 432 TYR OXT HXT sing N N 433 VAL N CA sing N N 434 VAL N H sing N N 435 VAL N H2 sing N N 436 VAL CA C sing N N 437 VAL CA CB sing N N 438 VAL CA HA sing N N 439 VAL C O doub N N 440 VAL C OXT sing N N 441 VAL CB CG1 sing N N 442 VAL CB CG2 sing N N 443 VAL CB HB sing N N 444 VAL CG1 HG11 sing N N 445 VAL CG1 HG12 sing N N 446 VAL CG1 HG13 sing N N 447 VAL CG2 HG21 sing N N 448 VAL CG2 HG22 sing N N 449 VAL CG2 HG23 sing N N 450 VAL OXT HXT sing N N 451 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,4-DIAMINOBUTANE PUT 4 "5'-{[2-(aminooxy)ethyl](methyl)amino}-5'-deoxy-8-methyladenosine" M8M 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1I7B _pdbx_initial_refinement_model.details 1I7B.pdb #