HEADER TRANSCRIPTION/DNA 30-JUL-08 3DZU TITLE INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND TITLE 2 WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINOIC ACID RECEPTOR RXR-ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 11-462; COMPND 5 SYNONYM: RETINOID X RECEPTOR ALPHA, NUCLEAR RECEPTOR SUBFAMILY 2 COMPND 6 GROUP B MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 10 CHAIN: D; COMPND 11 FRAGMENT: UNP RESIDUES 102-505; COMPND 12 SYNONYM: PPAR-GAMMA, NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'- COMPND 16 D(*DCP*DAP*DAP*DAP*DCP*DTP*DAP*DGP*DGP*DTP*DCP*DAP*DAP*DAP*DGP*DGP*DT COMPND 17 P*DCP*DAP*DG)-3'); COMPND 18 CHAIN: C; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: DNA (5'- COMPND 22 D(*DCP*DTP*DGP*DAP*DCP*DCP*DTP*DTP*DTP*DGP*DAP*DCP*DCP*DTP*DAP*DGP*DT COMPND 23 P*DTP*DTP*DG)-3'); COMPND 24 CHAIN: F; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 5; COMPND 27 MOLECULE: NCOA2 PEPTIDE; COMPND 28 CHAIN: G, E; COMPND 29 ENGINEERED: YES; COMPND 30 OTHER_DETAILS: LXXLL MOTIF PEPTIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RXRA, NR2B1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-46 EK/LIC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: PPARG, NR1C3; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET-46 EK/LIC; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 OTHER_DETAILS: SYNTHETIC DNA; SOURCE 24 MOL_ID: 4; SOURCE 25 SYNTHETIC: YES; SOURCE 26 OTHER_DETAILS: SYNTHETIC DNA; SOURCE 27 MOL_ID: 5; SOURCE 28 SYNTHETIC: YES; SOURCE 29 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMANS KEYWDS DNA-BINDING, HOST-VIRUS INTERACTION, METAL-BINDING, NUCLEUS, KEYWDS 2 RECEPTOR, TRANSCRIPTION, TRANSCRIPTION REGULATION, ZINC-FINGER, KEYWDS 3 ACTIVATOR, DIABETES MELLITUS, DISEASE MUTATION, OBESITY, KEYWDS 4 PHOSPHOPROTEIN, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.CHANDRA,P.HUANG,Y.HAMURO,S.RAGHURAM,Y.WANG,T.P.BURRIS,F.RASTINEJAD REVDAT 9 21-FEB-24 3DZU 1 REMARK SEQADV REVDAT 8 25-OCT-17 3DZU 1 REMARK REVDAT 7 16-NOV-16 3DZU 1 FORMUL HET HETATM HETNAM REVDAT 6 16-MAY-12 3DZU 1 JRNL VERSN REVDAT 5 01-JUN-11 3DZU 1 REMARK REVDAT 4 28-JUL-10 3DZU 1 JRNL REVDAT 3 21-JUL-10 3DZU 1 JRNL REVDAT 2 24-FEB-09 3DZU 1 VERSN REVDAT 1 28-OCT-08 3DZU 0 JRNL AUTH V.CHANDRA,P.HUANG,Y.HAMURO,S.RAGHURAM,Y.WANG,T.P.BURRIS, JRNL AUTH 2 F.RASTINEJAD JRNL TITL STRUCTURE OF THE INTACT PPAR-GAMMA-RXR- NUCLEAR RECEPTOR JRNL TITL 2 COMPLEX ON DNA. JRNL REF NATURE V. 456 350 2008 JRNL REFN ISSN 0028-0836 JRNL PMID 19043829 JRNL DOI 10.1038/NATURE07413 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 16543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 853 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2080 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 130 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5337 REMARK 3 NUCLEIC ACID ATOMS : 814 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.55000 REMARK 3 B22 (A**2) : -9.33000 REMARK 3 B33 (A**2) : 6.78000 REMARK 3 B12 (A**2) : -11.45000 REMARK 3 B13 (A**2) : -2.55000 REMARK 3 B23 (A**2) : -3.61000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.30 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.960 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 65.02 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : REA.PAR REMARK 3 PARAMETER FILE 5 : PLB.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000048696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16546 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.11500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15-18% PEG 3350, 25MM MGCL2, 100MM REMARK 280 NH4CL, 5MM DTT AND 0.1M MES, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, C, F, G, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -4 REMARK 465 ALA A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 VAL A 4 REMARK 465 ASP A 5 REMARK 465 ASP A 6 REMARK 465 ASP A 7 REMARK 465 ASP A 8 REMARK 465 LYS A 9 REMARK 465 MET A 10 REMARK 465 PHE A 11 REMARK 465 SER A 12 REMARK 465 THR A 13 REMARK 465 GLN A 14 REMARK 465 VAL A 15 REMARK 465 ASN A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 THR A 20 REMARK 465 SER A 21 REMARK 465 PRO A 22 REMARK 465 THR A 23 REMARK 465 GLY A 24 REMARK 465 ARG A 25 REMARK 465 GLY A 26 REMARK 465 SER A 27 REMARK 465 MET A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 PRO A 31 REMARK 465 SER A 32 REMARK 465 LEU A 33 REMARK 465 HIS A 34 REMARK 465 PRO A 35 REMARK 465 SER A 36 REMARK 465 LEU A 37 REMARK 465 GLY A 38 REMARK 465 PRO A 39 REMARK 465 GLY A 40 REMARK 465 ILE A 41 REMARK 465 GLY A 42 REMARK 465 SER A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 45 REMARK 465 GLN A 46 REMARK 465 LEU A 47 REMARK 465 HIS A 48 REMARK 465 SER A 49 REMARK 465 PRO A 50 REMARK 465 ILE A 51 REMARK 465 SER A 52 REMARK 465 THR A 53 REMARK 465 LEU A 54 REMARK 465 SER A 55 REMARK 465 SER A 56 REMARK 465 PRO A 57 REMARK 465 ILE A 58 REMARK 465 ASN A 59 REMARK 465 GLY A 60 REMARK 465 MET A 61 REMARK 465 GLY A 62 REMARK 465 PRO A 63 REMARK 465 PRO A 64 REMARK 465 PHE A 65 REMARK 465 SER A 66 REMARK 465 VAL A 67 REMARK 465 ILE A 68 REMARK 465 SER A 69 REMARK 465 SER A 70 REMARK 465 PRO A 71 REMARK 465 MET A 72 REMARK 465 GLY A 73 REMARK 465 PRO A 74 REMARK 465 HIS A 75 REMARK 465 SER A 76 REMARK 465 MET A 77 REMARK 465 SER A 78 REMARK 465 VAL A 79 REMARK 465 PRO A 80 REMARK 465 THR A 81 REMARK 465 THR A 82 REMARK 465 PRO A 83 REMARK 465 THR A 84 REMARK 465 LEU A 85 REMARK 465 GLY A 86 REMARK 465 PHE A 87 REMARK 465 SER A 88 REMARK 465 THR A 89 REMARK 465 GLY A 90 REMARK 465 SER A 91 REMARK 465 PRO A 92 REMARK 465 GLN A 93 REMARK 465 LEU A 94 REMARK 465 SER A 95 REMARK 465 SER A 96 REMARK 465 PRO A 97 REMARK 465 MET A 98 REMARK 465 ASN A 99 REMARK 465 PRO A 100 REMARK 465 VAL A 101 REMARK 465 SER A 102 REMARK 465 SER A 103 REMARK 465 SER A 104 REMARK 465 GLU A 105 REMARK 465 ASP A 106 REMARK 465 ILE A 107 REMARK 465 LYS A 108 REMARK 465 PRO A 109 REMARK 465 PRO A 110 REMARK 465 LEU A 111 REMARK 465 GLY A 112 REMARK 465 LEU A 113 REMARK 465 ASN A 114 REMARK 465 GLY A 115 REMARK 465 VAL A 116 REMARK 465 LEU A 117 REMARK 465 LYS A 118 REMARK 465 VAL A 119 REMARK 465 PRO A 120 REMARK 465 ALA A 121 REMARK 465 HIS A 122 REMARK 465 PRO A 123 REMARK 465 SER A 124 REMARK 465 GLY A 125 REMARK 465 ASN A 126 REMARK 465 MET A 127 REMARK 465 ALA A 128 REMARK 465 SER A 129 REMARK 465 PHE A 130 REMARK 465 THR A 131 REMARK 465 GLY A 212 REMARK 465 LYS A 213 REMARK 465 ASP A 214 REMARK 465 ARG A 215 REMARK 465 ASN A 216 REMARK 465 GLU A 217 REMARK 465 ASN A 218 REMARK 465 GLU A 219 REMARK 465 VAL A 220 REMARK 465 GLU A 221 REMARK 465 SER A 222 REMARK 465 THR A 223 REMARK 465 SER A 224 REMARK 465 SER A 225 REMARK 465 VAL A 242 REMARK 465 GLU A 243 REMARK 465 PRO A 244 REMARK 465 LYS A 245 REMARK 465 THR A 246 REMARK 465 GLU A 247 REMARK 465 THR A 248 REMARK 465 TYR A 249 REMARK 465 VAL A 250 REMARK 465 GLU A 251 REMARK 465 ALA A 252 REMARK 465 ASN A 253 REMARK 465 MET A 254 REMARK 465 GLY A 255 REMARK 465 LEU A 256 REMARK 465 ASN A 257 REMARK 465 PRO A 258 REMARK 465 SER A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 ASN A 262 REMARK 465 GLU A 456 REMARK 465 ALA A 457 REMARK 465 PRO A 458 REMARK 465 HIS A 459 REMARK 465 GLN A 460 REMARK 465 MET A 461 REMARK 465 THR A 462 REMARK 465 MET D 59 REMARK 465 ALA D 60 REMARK 465 HIS D 61 REMARK 465 HIS D 62 REMARK 465 HIS D 63 REMARK 465 HIS D 64 REMARK 465 HIS D 65 REMARK 465 HIS D 66 REMARK 465 VAL D 67 REMARK 465 ASP D 68 REMARK 465 ASP D 69 REMARK 465 ASP D 70 REMARK 465 ASP D 71 REMARK 465 LYS D 72 REMARK 465 MET D 73 REMARK 465 TYR D 74 REMARK 465 GLN D 75 REMARK 465 SER D 76 REMARK 465 ALA D 77 REMARK 465 ILE D 78 REMARK 465 LYS D 79 REMARK 465 VAL D 80 REMARK 465 GLU D 81 REMARK 465 PRO D 82 REMARK 465 ALA D 83 REMARK 465 SER D 84 REMARK 465 PRO D 85 REMARK 465 PRO D 86 REMARK 465 TYR D 87 REMARK 465 TYR D 88 REMARK 465 SER D 89 REMARK 465 GLU D 90 REMARK 465 LYS D 91 REMARK 465 THR D 92 REMARK 465 GLN D 93 REMARK 465 LEU D 94 REMARK 465 TYR D 95 REMARK 465 ASN D 96 REMARK 465 LYS D 97 REMARK 465 PRO D 98 REMARK 465 HIS D 99 REMARK 465 GLU D 100 REMARK 465 GLU D 101 REMARK 465 PRO D 102 REMARK 465 SER D 103 REMARK 465 ASN D 104 REMARK 465 SER D 105 REMARK 465 LEU D 106 REMARK 465 MET D 107 REMARK 465 LYS D 265 REMARK 465 HIS D 266 REMARK 465 ILE D 267 REMARK 465 THR D 268 REMARK 465 PRO D 269 REMARK 465 LEU D 270 REMARK 465 GLN D 271 REMARK 465 GLU D 272 REMARK 465 GLN D 273 REMARK 465 SER D 274 REMARK 465 LYS D 275 REMARK 465 GLU G 685 REMARK 465 LYS G 686 REMARK 465 HIS G 687 REMARK 465 SER G 697 REMARK 465 GLU E 685 REMARK 465 LYS E 686 REMARK 465 HIS E 687 REMARK 465 ASP E 696 REMARK 465 SER E 697 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC F4006 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC F4013 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 140 176.57 -53.25 REMARK 500 ASP A 173 -157.55 -84.43 REMARK 500 ASN A 174 55.03 -101.23 REMARK 500 LYS A 175 55.18 33.75 REMARK 500 LYS A 201 109.94 -57.64 REMARK 500 GLN A 210 -142.71 -155.80 REMARK 500 PRO A 231 97.76 -51.71 REMARK 500 ILE A 268 -70.70 -51.56 REMARK 500 HIS A 288 -34.16 73.17 REMARK 500 VAL A 320 164.90 -47.06 REMARK 500 LYS A 321 -67.26 -92.54 REMARK 500 ALA A 327 -22.32 93.20 REMARK 500 VAL A 332 75.36 -153.78 REMARK 500 ARG A 334 -82.44 -44.96 REMARK 500 ASN A 335 -32.06 -32.80 REMARK 500 VAL A 342 19.72 -142.76 REMARK 500 LEU A 353 -67.10 -127.83 REMARK 500 ASP A 359 11.49 -57.83 REMARK 500 GLN A 361 71.92 47.36 REMARK 500 ASN A 385 92.35 -173.43 REMARK 500 HIS A 406 -79.89 -86.03 REMARK 500 PRO A 412 -77.96 -48.10 REMARK 500 LEU A 420 8.22 -65.86 REMARK 500 LYS A 440 -79.75 -66.30 REMARK 500 THR A 445 161.21 55.16 REMARK 500 VAL D 113 -69.41 -90.28 REMARK 500 TYR D 123 54.03 38.85 REMARK 500 VAL D 125 149.06 -173.28 REMARK 500 LYS D 132 -74.00 -62.47 REMARK 500 THR D 138 -71.22 -55.72 REMARK 500 LEU D 141 2.15 -153.12 REMARK 500 LYS D 142 68.91 38.09 REMARK 500 ARG D 147 -172.16 -64.74 REMARK 500 CYS D 148 129.32 -176.62 REMARK 500 ILE D 180 103.46 -57.06 REMARK 500 PRO D 186 -86.03 -58.65 REMARK 500 ALA D 188 15.16 -66.54 REMARK 500 LEU D 193 47.13 -72.09 REMARK 500 ALA D 195 -54.72 67.64 REMARK 500 GLU D 196 86.52 -159.23 REMARK 500 ILE D 197 19.18 -63.79 REMARK 500 SER D 199 -45.88 -137.89 REMARK 500 ASP D 200 -19.63 -44.77 REMARK 500 ASN D 205 161.26 171.41 REMARK 500 SER D 208 30.70 -74.82 REMARK 500 THR D 229 -170.57 -68.45 REMARK 500 LYS D 240 41.71 -73.49 REMARK 500 THR D 241 -147.37 -112.08 REMARK 500 THR D 242 -14.59 -146.84 REMARK 500 LYS D 263 104.77 -31.99 REMARK 500 REMARK 500 THIS ENTRY HAS 74 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC C3005 0.07 SIDE CHAIN REMARK 500 DA C3014 0.08 SIDE CHAIN REMARK 500 DG C3015 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A7221 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 135 SG REMARK 620 2 CYS A 138 SG 90.7 REMARK 620 3 CYS A 152 SG 146.4 117.7 REMARK 620 4 CYS A 155 SG 93.7 89.4 103.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A7222 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 171 SG REMARK 620 2 CYS A 177 SG 102.9 REMARK 620 3 CYS A 187 SG 118.3 115.0 REMARK 620 4 CYS A 190 SG 110.9 99.3 108.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D7121 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 111 SG REMARK 620 2 CYS D 114 SG 126.6 REMARK 620 3 CYS D 128 SG 128.1 85.9 REMARK 620 4 CYS D 131 SG 117.8 101.2 87.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D7122 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 148 SG REMARK 620 2 CYS D 152 SG 101.2 REMARK 620 3 CYS D 162 SG 105.6 116.3 REMARK 620 4 CYS D 165 SG 107.2 107.4 117.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 7121 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 7122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 7221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 7222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9CR A 7223 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLB D 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DZY RELATED DB: PDB REMARK 900 INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND REMARK 900 WITH ROSIGLITAZONE, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE REMARK 900 RELATED ID: 3E00 RELATED DB: PDB REMARK 900 INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND REMARK 900 WITH GW9662, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE RESIDUE NUMBERING IN CHAIN D CORRESPONDS TO ISOFORM-1, UNP REMARK 999 ENTRY P37231 DBREF 3DZU A 11 462 UNP P19793 RXRA_HUMAN 11 462 DBREF 3DZU D 74 477 UNP P37231 PPARG_HUMAN 102 505 DBREF 3DZU G 685 697 UNP Q15596 NCOA2_HUMAN 685 697 DBREF 3DZU E 685 697 UNP Q15596 NCOA2_HUMAN 685 697 DBREF 3DZU C 3001 3020 PDB 3DZU 3DZU 3001 3020 DBREF 3DZU F 4001 4020 PDB 3DZU 3DZU 4001 4020 SEQADV 3DZU MET A -4 UNP P19793 EXPRESSION TAG SEQADV 3DZU ALA A -3 UNP P19793 EXPRESSION TAG SEQADV 3DZU HIS A -2 UNP P19793 EXPRESSION TAG SEQADV 3DZU HIS A -1 UNP P19793 EXPRESSION TAG SEQADV 3DZU HIS A 0 UNP P19793 EXPRESSION TAG SEQADV 3DZU HIS A 1 UNP P19793 EXPRESSION TAG SEQADV 3DZU HIS A 2 UNP P19793 EXPRESSION TAG SEQADV 3DZU HIS A 3 UNP P19793 EXPRESSION TAG SEQADV 3DZU VAL A 4 UNP P19793 EXPRESSION TAG SEQADV 3DZU ASP A 5 UNP P19793 EXPRESSION TAG SEQADV 3DZU ASP A 6 UNP P19793 EXPRESSION TAG SEQADV 3DZU ASP A 7 UNP P19793 EXPRESSION TAG SEQADV 3DZU ASP A 8 UNP P19793 EXPRESSION TAG SEQADV 3DZU LYS A 9 UNP P19793 EXPRESSION TAG SEQADV 3DZU MET A 10 UNP P19793 EXPRESSION TAG SEQADV 3DZU MET D 59 UNP P37231 EXPRESSION TAG SEQADV 3DZU ALA D 60 UNP P37231 EXPRESSION TAG SEQADV 3DZU HIS D 61 UNP P37231 EXPRESSION TAG SEQADV 3DZU HIS D 62 UNP P37231 EXPRESSION TAG SEQADV 3DZU HIS D 63 UNP P37231 EXPRESSION TAG SEQADV 3DZU HIS D 64 UNP P37231 EXPRESSION TAG SEQADV 3DZU HIS D 65 UNP P37231 EXPRESSION TAG SEQADV 3DZU HIS D 66 UNP P37231 EXPRESSION TAG SEQADV 3DZU VAL D 67 UNP P37231 EXPRESSION TAG SEQADV 3DZU ASP D 68 UNP P37231 EXPRESSION TAG SEQADV 3DZU ASP D 69 UNP P37231 EXPRESSION TAG SEQADV 3DZU ASP D 70 UNP P37231 EXPRESSION TAG SEQADV 3DZU ASP D 71 UNP P37231 EXPRESSION TAG SEQADV 3DZU LYS D 72 UNP P37231 EXPRESSION TAG SEQADV 3DZU MET D 73 UNP P37231 EXPRESSION TAG SEQRES 1 A 467 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 A 467 LYS MET PHE SER THR GLN VAL ASN SER SER LEU THR SER SEQRES 3 A 467 PRO THR GLY ARG GLY SER MET ALA ALA PRO SER LEU HIS SEQRES 4 A 467 PRO SER LEU GLY PRO GLY ILE GLY SER PRO GLY GLN LEU SEQRES 5 A 467 HIS SER PRO ILE SER THR LEU SER SER PRO ILE ASN GLY SEQRES 6 A 467 MET GLY PRO PRO PHE SER VAL ILE SER SER PRO MET GLY SEQRES 7 A 467 PRO HIS SER MET SER VAL PRO THR THR PRO THR LEU GLY SEQRES 8 A 467 PHE SER THR GLY SER PRO GLN LEU SER SER PRO MET ASN SEQRES 9 A 467 PRO VAL SER SER SER GLU ASP ILE LYS PRO PRO LEU GLY SEQRES 10 A 467 LEU ASN GLY VAL LEU LYS VAL PRO ALA HIS PRO SER GLY SEQRES 11 A 467 ASN MET ALA SER PHE THR LYS HIS ILE CYS ALA ILE CYS SEQRES 12 A 467 GLY ASP ARG SER SER GLY LYS HIS TYR GLY VAL TYR SER SEQRES 13 A 467 CYS GLU GLY CYS LYS GLY PHE PHE LYS ARG THR VAL ARG SEQRES 14 A 467 LYS ASP LEU THR TYR THR CYS ARG ASP ASN LYS ASP CYS SEQRES 15 A 467 LEU ILE ASP LYS ARG GLN ARG ASN ARG CYS GLN TYR CYS SEQRES 16 A 467 ARG TYR GLN LYS CYS LEU ALA MET GLY MET LYS ARG GLU SEQRES 17 A 467 ALA VAL GLN GLU GLU ARG GLN ARG GLY LYS ASP ARG ASN SEQRES 18 A 467 GLU ASN GLU VAL GLU SER THR SER SER ALA ASN GLU ASP SEQRES 19 A 467 MET PRO VAL GLU ARG ILE LEU GLU ALA GLU LEU ALA VAL SEQRES 20 A 467 GLU PRO LYS THR GLU THR TYR VAL GLU ALA ASN MET GLY SEQRES 21 A 467 LEU ASN PRO SER SER PRO ASN ASP PRO VAL THR ASN ILE SEQRES 22 A 467 CYS GLN ALA ALA ASP LYS GLN LEU PHE THR LEU VAL GLU SEQRES 23 A 467 TRP ALA LYS ARG ILE PRO HIS PHE SER GLU LEU PRO LEU SEQRES 24 A 467 ASP ASP GLN VAL ILE LEU LEU ARG ALA GLY TRP ASN GLU SEQRES 25 A 467 LEU LEU ILE ALA SER PHE SER HIS ARG SER ILE ALA VAL SEQRES 26 A 467 LYS ASP GLY ILE LEU LEU ALA THR GLY LEU HIS VAL HIS SEQRES 27 A 467 ARG ASN SER ALA HIS SER ALA GLY VAL GLY ALA ILE PHE SEQRES 28 A 467 ASP ARG VAL LEU THR GLU LEU VAL SER LYS MET ARG ASP SEQRES 29 A 467 MET GLN MET ASP LYS THR GLU LEU GLY CYS LEU ARG ALA SEQRES 30 A 467 ILE VAL LEU PHE ASN PRO ASP SER LYS GLY LEU SER ASN SEQRES 31 A 467 PRO ALA GLU VAL GLU ALA LEU ARG GLU LYS VAL TYR ALA SEQRES 32 A 467 SER LEU GLU ALA TYR CYS LYS HIS LYS TYR PRO GLU GLN SEQRES 33 A 467 PRO GLY ARG PHE ALA LYS LEU LEU LEU ARG LEU PRO ALA SEQRES 34 A 467 LEU ARG SER ILE GLY LEU LYS CYS LEU GLU HIS LEU PHE SEQRES 35 A 467 PHE PHE LYS LEU ILE GLY ASP THR PRO ILE ASP THR PHE SEQRES 36 A 467 LEU MET GLU MET LEU GLU ALA PRO HIS GLN MET THR SEQRES 1 D 419 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 D 419 LYS MET TYR GLN SER ALA ILE LYS VAL GLU PRO ALA SER SEQRES 3 D 419 PRO PRO TYR TYR SER GLU LYS THR GLN LEU TYR ASN LYS SEQRES 4 D 419 PRO HIS GLU GLU PRO SER ASN SER LEU MET ALA ILE GLU SEQRES 5 D 419 CYS ARG VAL CYS GLY ASP LYS ALA SER GLY PHE HIS TYR SEQRES 6 D 419 GLY VAL HIS ALA CYS GLU GLY CYS LYS GLY PHE PHE ARG SEQRES 7 D 419 ARG THR ILE ARG LEU LYS LEU ILE TYR ASP ARG CYS ASP SEQRES 8 D 419 LEU ASN CYS ARG ILE HIS LYS LYS SER ARG ASN LYS CYS SEQRES 9 D 419 GLN TYR CYS ARG PHE GLN LYS CYS LEU ALA VAL GLY MET SEQRES 10 D 419 SER HIS ASN ALA ILE ARG PHE GLY ARG MET PRO GLN ALA SEQRES 11 D 419 GLU LYS GLU LYS LEU LEU ALA GLU ILE SER SER ASP ILE SEQRES 12 D 419 ASP GLN LEU ASN PRO GLU SER ALA ASP LEU ARG ALA LEU SEQRES 13 D 419 ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SER PHE PRO SEQRES 14 D 419 LEU THR LYS ALA LYS ALA ARG ALA ILE LEU THR GLY LYS SEQRES 15 D 419 THR THR ASP LYS SER PRO PHE VAL ILE TYR ASP MET ASN SEQRES 16 D 419 SER LEU MET MET GLY GLU ASP LYS ILE LYS PHE LYS HIS SEQRES 17 D 419 ILE THR PRO LEU GLN GLU GLN SER LYS GLU VAL ALA ILE SEQRES 18 D 419 ARG ILE PHE GLN GLY CYS GLN PHE ARG SER VAL GLU ALA SEQRES 19 D 419 VAL GLN GLU ILE THR GLU TYR ALA LYS SER ILE PRO GLY SEQRES 20 D 419 PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL THR LEU LEU SEQRES 21 D 419 LYS TYR GLY VAL HIS GLU ILE ILE TYR THR MET LEU ALA SEQRES 22 D 419 SER LEU MET ASN LYS ASP GLY VAL LEU ILE SER GLU GLY SEQRES 23 D 419 GLN GLY PHE MET THR ARG GLU PHE LEU LYS SER LEU ARG SEQRES 24 D 419 LYS PRO PHE GLY ASP PHE MET GLU PRO LYS PHE GLU PHE SEQRES 25 D 419 ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SER ASP SEQRES 26 D 419 LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SER GLY ASP SEQRES 27 D 419 ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU ASP ILE SEQRES 28 D 419 GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN LEU LYS SEQRES 29 D 419 LEU ASN HIS PRO GLU SER SER GLN LEU PHE ALA LYS LEU SEQRES 30 D 419 LEU GLN LYS MET THR ASP LEU ARG GLN ILE VAL THR GLU SEQRES 31 D 419 HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS THR GLU THR SEQRES 32 D 419 ASP MET SER LEU HIS PRO LEU LEU GLN GLU ILE TYR LYS SEQRES 33 D 419 ASP LEU TYR SEQRES 1 C 20 DC DA DA DA DC DT DA DG DG DT DC DA DA SEQRES 2 C 20 DA DG DG DT DC DA DG SEQRES 1 F 20 DC DT DG DA DC DC DT DT DT DG DA DC DC SEQRES 2 F 20 DT DA DG DT DT DT DG SEQRES 1 G 13 GLU LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SEQRES 1 E 13 GLU LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER HET ZN A7221 1 HET ZN A7222 1 HET 9CR A7223 22 HET ZN D7121 1 HET ZN D7122 1 HET PLB D 701 27 HETNAM ZN ZINC ION HETNAM 9CR (9CIS)-RETINOIC ACID HETNAM PLB 2-[(2,4-DICHLOROBENZOYL)AMINO]-5-(PYRIMIDIN-2-YLOXY) HETNAM 2 PLB BENZOIC ACID HETSYN PLB 5-(2-PYRIMIDINYLOXY)-2-BENZOYLAMINOBENZOIC ACID FORMUL 7 ZN 4(ZN 2+) FORMUL 9 9CR C20 H28 O2 FORMUL 12 PLB C18 H11 CL2 N3 O4 HELIX 1 1 CYS A 152 ASP A 166 1 15 HELIX 2 2 CYS A 187 MET A 198 1 12 HELIX 3 3 LYS A 201 VAL A 205 5 5 HELIX 4 4 PRO A 231 GLU A 239 1 9 HELIX 5 5 ASP A 263 ARG A 285 1 23 HELIX 6 6 PRO A 293 SER A 317 1 25 HELIX 7 7 HIS A 333 ALA A 340 1 8 HELIX 8 8 VAL A 342 LEU A 353 1 12 HELIX 9 9 LEU A 353 ASP A 359 1 7 HELIX 10 10 ASP A 363 PHE A 376 1 14 HELIX 11 11 ASN A 385 TYR A 408 1 24 HELIX 12 12 GLY A 413 LEU A 420 1 8 HELIX 13 13 ARG A 421 GLY A 443 1 23 HELIX 14 14 ASP A 448 LEU A 455 1 8 HELIX 15 15 CYS D 128 ARG D 140 1 13 HELIX 16 16 CYS D 162 GLY D 174 1 13 HELIX 17 17 GLU D 196 ILE D 201 1 6 HELIX 18 18 ASP D 210 PHE D 226 1 17 HELIX 19 19 THR D 229 GLY D 239 1 11 HELIX 20 20 MET D 252 MET D 257 1 6 HELIX 21 21 VAL D 277 SER D 302 1 26 HELIX 22 22 ASP D 310 ALA D 331 1 22 HELIX 23 23 ARG D 350 LYS D 354 1 5 HELIX 24 24 PHE D 363 ALA D 376 1 14 HELIX 25 25 ASP D 380 LEU D 393 1 14 HELIX 26 26 VAL D 403 HIS D 425 1 23 HELIX 27 27 GLN D 430 THR D 459 1 30 HELIX 28 28 HIS D 466 LYS D 474 1 9 HELIX 29 29 LYS G 688 LEU G 694 1 7 HELIX 30 30 LEU E 690 GLN E 695 1 6 SHEET 1 A 2 HIS A 133 ILE A 134 0 SHEET 2 A 2 ARG A 141 SER A 142 -1 O SER A 142 N HIS A 133 SHEET 1 B 2 LYS A 145 HIS A 146 0 SHEET 2 B 2 VAL A 149 TYR A 150 -1 O VAL A 149 N HIS A 146 SHEET 1 C 2 PHE D 121 HIS D 122 0 SHEET 2 C 2 VAL D 125 HIS D 126 -1 O VAL D 125 N HIS D 122 SHEET 1 D 4 PHE D 247 ILE D 249 0 SHEET 2 D 4 GLY D 346 THR D 349 1 O PHE D 347 N ILE D 249 SHEET 3 D 4 GLY D 338 ILE D 341 -1 N ILE D 341 O GLY D 346 SHEET 4 D 4 MET D 334 ASN D 335 -1 N ASN D 335 O GLY D 338 LINK SG CYS A 135 ZN ZN A7221 1555 1555 2.39 LINK SG CYS A 138 ZN ZN A7221 1555 1555 2.32 LINK SG CYS A 152 ZN ZN A7221 1555 1555 2.37 LINK SG CYS A 155 ZN ZN A7221 1555 1555 2.58 LINK SG CYS A 171 ZN ZN A7222 1555 1555 2.24 LINK SG CYS A 177 ZN ZN A7222 1555 1555 2.65 LINK SG CYS A 187 ZN ZN A7222 1555 1555 2.45 LINK SG CYS A 190 ZN ZN A7222 1555 1555 2.40 LINK SG CYS D 111 ZN ZN D7121 1555 1555 2.38 LINK SG CYS D 114 ZN ZN D7121 1555 1555 2.29 LINK SG CYS D 128 ZN ZN D7121 1555 1555 2.43 LINK SG CYS D 131 ZN ZN D7121 1555 1555 2.37 LINK SG CYS D 148 ZN ZN D7122 1555 1555 2.53 LINK SG CYS D 152 ZN ZN D7122 1555 1555 2.45 LINK SG CYS D 162 ZN ZN D7122 1555 1555 2.45 LINK SG CYS D 165 ZN ZN D7122 1555 1555 2.40 CISPEP 1 ASN D 205 PRO D 206 0 0.04 SITE 1 AC1 4 CYS D 111 CYS D 114 CYS D 128 CYS D 131 SITE 1 AC2 5 CYS D 148 LEU D 150 CYS D 152 CYS D 162 SITE 2 AC2 5 CYS D 165 SITE 1 AC3 4 CYS A 135 CYS A 138 CYS A 152 CYS A 155 SITE 1 AC4 4 CYS A 171 CYS A 177 CYS A 187 CYS A 190 SITE 1 AC5 11 ILE A 268 ALA A 271 ALA A 272 GLN A 275 SITE 2 AC5 11 ASN A 306 ILE A 310 PHE A 313 ARG A 316 SITE 3 AC5 11 LEU A 326 CYS A 432 HIS A 435 SITE 1 AC6 9 ARG D 280 ILE D 281 GLY D 284 CYS D 285 SITE 2 AC6 9 ARG D 288 LEU D 333 LEU D 340 ILE D 341 SITE 3 AC6 9 SER D 342 CRYST1 64.186 66.907 78.464 70.95 82.56 62.88 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015580 -0.007979 0.000402 0.00000 SCALE2 0.000000 0.016792 -0.005338 0.00000 SCALE3 0.000000 0.000000 0.013487 0.00000