HEADER TRANSFERASE 14-AUG-08 3E5Y TITLE CRYSTAL STRUCTURE OF TRMH FAMILY RNA METHYLTRANSFERASE FROM TITLE 2 BURKHOLDERIA PSEUDOMALLEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRMH FAMILY RNA METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RNA METHYLTRANSFERASE, TRMH FAMILY, GROUP 2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI 305; SOURCE 3 ORGANISM_TAXID: 425067; SOURCE 4 GENE: BURPS305_4843; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: AVA0421 KEYWDS SSGCID, PROTEIN KNOT, DECODE, RNA METHYLTRANSFERASE, KEYWDS 2 METHYLTRANSFERASE, TRANSFERASE, STRUCTURAL GENOMICS, SEATTLE KEYWDS 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 30-AUG-23 3E5Y 1 REMARK REVDAT 3 25-OCT-17 3E5Y 1 REMARK REVDAT 2 24-FEB-09 3E5Y 1 VERSN REVDAT 1 26-AUG-08 3E5Y 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF TRMH FAMILY RNA METHYLTRANSFERASE FROM JRNL TITL 2 BURKHOLDERIA PSEUDOMALLEI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 12162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 592 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 802 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2329 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.64000 REMARK 3 B22 (A**2) : -0.97000 REMARK 3 B33 (A**2) : 2.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.669 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.283 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.203 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.678 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2407 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1690 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3272 ; 1.724 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4025 ; 1.475 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 294 ;15.244 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;28.178 ;21.825 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 350 ;17.969 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.612 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 339 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2756 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 570 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1483 ; 0.846 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 593 ; 0.153 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2375 ; 1.574 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 924 ; 2.315 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 897 ; 3.743 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3E5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000048916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12194 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.65200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1J85 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PACT SPARSE MATRIX SCREEN G10 AND H10; REMARK 280 20% PEG 3350, 0.2 M SODIUM/POTASSIUM PHOSPHATE, 0.1 M BISTRIS REMARK 280 PROPANE, PH 7.5 OR 8.5; 27.6 MG/ML PROTEIN; CRYSTAL ID 109613H10, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.36200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.44100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.26600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.44100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.36200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.26600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ASP B 41 REMARK 465 ALA B 42 REMARK 465 LYS B 43 REMARK 465 MET B 44 REMARK 465 ARG B 45 REMARK 465 ARG B 46 REMARK 465 ALA B 47 REMARK 465 GLY B 48 REMARK 465 LEU B 49 REMARK 465 ASP B 50 REMARK 465 TYR B 51 REMARK 465 HIS B 52 REMARK 465 GLU B 53 REMARK 465 TYR B 54 REMARK 465 ALA B 55 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 28 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 131 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 14 OE1 GLU A 104 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 152 CE2 PHE A 152 CD2 -0.121 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 33 -179.64 -60.99 REMARK 500 GLN A 56 55.96 -100.82 REMARK 500 ASP A 62 -178.29 -172.44 REMARK 500 ASN A 130 -98.89 -177.47 REMARK 500 ARG A 131 -178.58 -175.71 REMARK 500 ALA B 71 59.53 37.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 33 PRO A 34 -44.52 REMARK 500 GLY B 129 ASN B 130 -86.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 33 -10.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUPSA.00072.A RELATED DB: TARGETDB DBREF 3E5Y A 1 156 UNP A4LJP7 A4LJP7_BURPS 24 179 DBREF 3E5Y B 1 156 UNP A4LJP7 A4LJP7_BURPS 24 179 SEQADV 3E5Y GLY A -3 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y PRO A -2 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y GLY A -1 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y SER A 0 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y GLY B -3 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y PRO B -2 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y GLY B -1 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y SER B 0 UNP A4LJP7 EXPRESSION TAG SEQRES 1 A 160 GLY PRO GLY SER MET PHE ASN VAL VAL LEU VAL GLU PRO SEQRES 2 A 160 GLU ILE PRO PRO ASN THR GLY ASN VAL ILE ARG LEU CYS SEQRES 3 A 160 ALA ASN THR GLY ALA ARG LEU HIS LEU ILE GLU PRO LEU SEQRES 4 A 160 GLY PHE PRO LEU ASP ASP ALA LYS MET ARG ARG ALA GLY SEQRES 5 A 160 LEU ASP TYR HIS GLU TYR ALA GLN MET ARG VAL HIS ARG SEQRES 6 A 160 ASP TRP ASP ALA PHE VAL ALA ALA GLU ALA PRO ASP PRO SEQRES 7 A 160 ALA ARG MET PHE ALA PHE THR THR ARG GLY SER GLY ARG SEQRES 8 A 160 PHE HIS ASP ARG ALA PHE GLU PRO GLY ASP TRP PHE VAL SEQRES 9 A 160 PHE GLY ALA GLU THR ARG GLY LEU ALA PRO ALA LEU VAL SEQRES 10 A 160 ASP ARG PHE ALA PRO GLU GLN ARG VAL ARG LEU PRO MET SEQRES 11 A 160 ARG PRO GLY ASN ARG SER LEU ASN LEU SER ASN THR VAL SEQRES 12 A 160 ALA VAL VAL VAL PHE GLU ALA TRP ARG GLN ALA GLY PHE SEQRES 13 A 160 GLU GLY GLY ALA SEQRES 1 B 160 GLY PRO GLY SER MET PHE ASN VAL VAL LEU VAL GLU PRO SEQRES 2 B 160 GLU ILE PRO PRO ASN THR GLY ASN VAL ILE ARG LEU CYS SEQRES 3 B 160 ALA ASN THR GLY ALA ARG LEU HIS LEU ILE GLU PRO LEU SEQRES 4 B 160 GLY PHE PRO LEU ASP ASP ALA LYS MET ARG ARG ALA GLY SEQRES 5 B 160 LEU ASP TYR HIS GLU TYR ALA GLN MET ARG VAL HIS ARG SEQRES 6 B 160 ASP TRP ASP ALA PHE VAL ALA ALA GLU ALA PRO ASP PRO SEQRES 7 B 160 ALA ARG MET PHE ALA PHE THR THR ARG GLY SER GLY ARG SEQRES 8 B 160 PHE HIS ASP ARG ALA PHE GLU PRO GLY ASP TRP PHE VAL SEQRES 9 B 160 PHE GLY ALA GLU THR ARG GLY LEU ALA PRO ALA LEU VAL SEQRES 10 B 160 ASP ARG PHE ALA PRO GLU GLN ARG VAL ARG LEU PRO MET SEQRES 11 B 160 ARG PRO GLY ASN ARG SER LEU ASN LEU SER ASN THR VAL SEQRES 12 B 160 ALA VAL VAL VAL PHE GLU ALA TRP ARG GLN ALA GLY PHE SEQRES 13 B 160 GLU GLY GLY ALA FORMUL 3 HOH *162(H2 O) HELIX 1 1 ILE A 11 GLY A 26 1 16 HELIX 2 2 ASP A 40 ALA A 47 1 8 HELIX 3 3 ASP A 50 GLN A 56 1 7 HELIX 4 4 ASP A 62 ALA A 71 1 10 HELIX 5 5 ASP A 73 ALA A 75 5 3 HELIX 6 6 HIS A 89 ARG A 91 5 3 HELIX 7 7 ALA A 109 ASP A 114 1 6 HELIX 8 8 ARG A 115 PHE A 116 5 2 HELIX 9 9 ALA A 117 GLU A 119 5 3 HELIX 10 10 ASN A 134 ALA A 150 1 17 HELIX 11 11 ILE B 11 GLY B 26 1 16 HELIX 12 12 ASP B 62 ALA B 71 1 10 HELIX 13 13 ASP B 73 ALA B 75 5 3 HELIX 14 14 HIS B 89 ARG B 91 5 3 HELIX 15 15 ALA B 109 ASP B 114 1 6 HELIX 16 16 ARG B 115 PHE B 116 5 2 HELIX 17 17 ALA B 117 GLU B 119 5 3 HELIX 18 18 ASN B 134 ALA B 150 1 17 SHEET 1 A 7 ARG A 58 HIS A 60 0 SHEET 2 A 7 ARG A 28 ILE A 32 1 N LEU A 31 O HIS A 60 SHEET 3 A 7 ASN A 3 VAL A 7 1 N VAL A 4 O HIS A 30 SHEET 4 A 7 TRP A 98 GLY A 102 1 O PHE A 101 N VAL A 5 SHEET 5 A 7 MET A 77 PHE A 80 1 N PHE A 78 O VAL A 100 SHEET 6 A 7 ARG A 121 ARG A 123 1 O VAL A 122 N ALA A 79 SHEET 7 A 7 GLY A 86 ARG A 87 1 N GLY A 86 O ARG A 123 SHEET 1 B 7 MET B 57 HIS B 60 0 SHEET 2 B 7 ARG B 28 ILE B 32 1 N LEU B 31 O HIS B 60 SHEET 3 B 7 ASN B 3 VAL B 7 1 N LEU B 6 O ILE B 32 SHEET 4 B 7 TRP B 98 GLY B 102 1 O PHE B 101 N VAL B 5 SHEET 5 B 7 MET B 77 PHE B 80 1 N PHE B 78 O VAL B 100 SHEET 6 B 7 ARG B 121 ARG B 123 1 O VAL B 122 N ALA B 79 SHEET 7 B 7 GLY B 86 ARG B 87 1 N GLY B 86 O ARG B 121 CISPEP 1 GLY A 129 ASN A 130 0 4.13 CISPEP 2 GLU B 33 PRO B 34 0 0.17 CRYST1 46.724 80.532 80.882 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021402 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012417 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012364 0.00000 TER 1222 ALA A 156 TER 2331 ALA B 156 HETATM 2332 O HOH A 157 -17.875 -11.009 12.922 1.00 20.42 O HETATM 2333 O HOH A 158 -30.176 -10.417 -2.624 1.00 13.90 O HETATM 2334 O HOH A 159 -14.680 -9.389 16.014 1.00 13.69 O HETATM 2335 O HOH A 160 -18.684 -18.175 11.711 1.00 26.44 O HETATM 2336 O HOH A 161 -17.913 -15.563 12.890 1.00 13.70 O HETATM 2337 O HOH A 162 -17.412 -11.356 -11.046 1.00 34.51 O HETATM 2338 O HOH A 163 -25.816 -12.274 21.384 1.00 44.20 O HETATM 2339 O HOH A 164 -14.029 -23.481 -3.138 1.00 24.29 O HETATM 2340 O HOH A 165 -14.320 -13.618 7.227 1.00 19.55 O HETATM 2341 O HOH A 166 -12.213 -20.065 -5.348 1.00 29.56 O HETATM 2342 O HOH A 167 -21.838 -5.896 -12.150 1.00 44.55 O HETATM 2343 O HOH A 168 -33.115 -20.144 13.133 1.00 17.58 O HETATM 2344 O HOH A 169 -30.886 -16.959 0.430 1.00 13.33 O HETATM 2345 O HOH A 170 -15.514 -18.822 13.825 1.00 48.41 O HETATM 2346 O HOH A 171 -29.967 -10.444 -7.156 1.00 23.40 O HETATM 2347 O HOH A 172 -27.124 -7.356 -5.770 1.00 23.74 O HETATM 2348 O HOH A 173 -15.380 -0.652 9.209 1.00 29.77 O HETATM 2349 O HOH A 174 -28.331 -21.363 11.563 1.00 27.03 O HETATM 2350 O HOH A 175 -29.962 -6.814 -1.492 1.00 31.16 O HETATM 2351 O HOH A 176 -25.717 -19.064 12.741 1.00 26.43 O HETATM 2352 O HOH A 177 -9.830 -11.457 3.579 1.00 19.28 O HETATM 2353 O HOH A 178 -28.989 -21.012 16.090 1.00 41.92 O HETATM 2354 O HOH A 179 -24.564 -19.675 0.968 1.00 32.98 O HETATM 2355 O HOH A 180 -24.089 -17.511 -1.633 1.00 18.87 O HETATM 2356 O HOH A 181 -10.336 -17.567 6.011 1.00 38.63 O HETATM 2357 O HOH A 182 -13.320 -16.405 7.390 1.00 35.57 O HETATM 2358 O HOH A 183 -11.163 -10.174 9.768 1.00 34.60 O HETATM 2359 O HOH A 184 -16.482 -6.972 16.273 1.00 33.12 O HETATM 2360 O HOH A 185 -30.623 -4.766 3.633 1.00 32.62 O HETATM 2361 O HOH A 186 -32.404 -3.834 6.262 1.00 31.82 O HETATM 2362 O HOH A 187 -33.590 -13.287 14.233 1.00 28.19 O HETATM 2363 O HOH A 188 -33.471 -8.946 2.030 1.00 23.60 O HETATM 2364 O HOH A 189 -27.751 -12.832 -9.893 1.00 37.45 O HETATM 2365 O HOH A 190 -22.219 -14.880 -8.726 1.00 30.21 O HETATM 2366 O HOH A 191 -13.978 -16.986 -5.851 1.00 35.70 O HETATM 2367 O HOH A 192 -12.850 -23.328 5.789 1.00 28.49 O HETATM 2368 O HOH A 193 -12.727 -27.710 8.530 1.00 38.19 O HETATM 2369 O HOH A 194 -13.692 -25.773 2.575 1.00 30.01 O HETATM 2370 O HOH A 195 -20.881 -2.113 -7.621 1.00 22.50 O HETATM 2371 O HOH A 196 -30.357 -2.225 -4.089 1.00 44.22 O HETATM 2372 O HOH A 197 -29.329 -9.253 -4.873 1.00 17.56 O HETATM 2373 O HOH A 198 -27.830 -8.437 -8.423 1.00 40.22 O HETATM 2374 O HOH A 199 -8.285 -15.064 -7.540 1.00 24.18 O HETATM 2375 O HOH A 200 -7.561 -18.765 -6.100 1.00 27.37 O HETATM 2376 O HOH A 201 7.835 -6.985 -1.681 1.00 34.57 O HETATM 2377 O HOH A 202 -11.126 3.691 -9.871 1.00 24.06 O HETATM 2378 O HOH A 203 -25.727 6.259 5.169 1.00 30.37 O HETATM 2379 O HOH A 204 -34.468 -21.643 8.910 1.00 39.49 O HETATM 2380 O HOH A 205 -34.628 -20.529 11.278 1.00 25.83 O HETATM 2381 O HOH A 206 -14.328 -25.305 4.928 1.00 20.60 O HETATM 2382 O HOH A 207 -9.324 -1.735 -2.445 1.00 28.62 O HETATM 2383 O HOH A 208 -15.750 12.951 -0.056 1.00 20.73 O HETATM 2384 O HOH A 209 -15.190 -25.560 -1.948 1.00 32.78 O HETATM 2385 O HOH A 210 -33.673 -13.000 11.437 1.00 35.55 O HETATM 2386 O HOH A 211 -34.339 -11.102 -0.515 1.00 24.21 O HETATM 2387 O HOH A 212 -11.942 -20.288 5.854 1.00 31.30 O HETATM 2388 O HOH A 213 -7.426 -19.527 -1.397 1.00 27.93 O HETATM 2389 O HOH A 214 -8.989 -21.385 5.729 1.00 48.21 O HETATM 2390 O HOH A 215 -1.333 -17.318 9.856 1.00 44.05 O HETATM 2391 O HOH A 216 -10.274 -19.701 -6.757 1.00 20.61 O HETATM 2392 O HOH A 217 -6.691 -8.946 13.479 1.00 49.47 O HETATM 2393 O HOH A 218 -6.703 -6.135 14.667 1.00 33.06 O HETATM 2394 O HOH A 219 -28.320 11.177 14.631 1.00 36.40 O HETATM 2395 O HOH A 221 -32.053 -9.435 20.528 1.00 20.57 O HETATM 2396 O HOH A 222 -39.277 -13.881 8.920 1.00 29.75 O HETATM 2397 O HOH A 223 -15.683 2.417 -12.357 1.00 47.21 O HETATM 2398 O HOH A 224 -15.847 5.172 15.103 1.00 50.46 O HETATM 2399 O HOH A 225 -16.594 1.822 18.576 1.00 39.15 O HETATM 2400 O HOH A 226 -20.921 -1.734 19.391 1.00 45.04 O HETATM 2401 O HOH A 227 -19.224 -4.278 26.232 1.00 43.46 O HETATM 2402 O HOH A 228 -18.216 -8.731 26.865 1.00 42.48 O HETATM 2403 O HOH A 229 -24.663 -18.022 15.212 1.00 27.26 O HETATM 2404 O HOH A 230 -27.094 -16.698 20.430 1.00 50.74 O HETATM 2405 O HOH A 231 -29.900 -7.138 23.861 1.00 33.42 O HETATM 2406 O HOH A 232 -3.534 -17.122 -3.036 1.00 46.80 O HETATM 2407 O HOH A 233 -14.099 -7.783 -13.121 1.00 32.86 O HETATM 2408 O HOH A 234 -19.109 -4.088 -11.039 1.00 38.44 O HETATM 2409 O HOH A 235 -21.559 -1.558 -9.967 1.00 43.20 O HETATM 2410 O HOH A 236 -24.655 0.520 -9.830 1.00 34.82 O HETATM 2411 O HOH A 237 -23.522 4.087 -11.351 1.00 57.51 O HETATM 2412 O HOH A 238 -20.665 -9.765 26.701 1.00 43.55 O HETATM 2413 O HOH A 239 -36.361 -12.298 -1.781 1.00 29.40 O HETATM 2414 O HOH A 240 -27.545 7.853 -5.134 1.00 50.85 O HETATM 2415 O HOH A 241 -28.584 2.341 10.977 1.00 29.81 O HETATM 2416 O HOH A 242 -1.032 -15.854 5.219 1.00 30.00 O HETATM 2417 O HOH A 243 -5.090 -4.668 9.201 1.00 30.00 O HETATM 2418 O HOH B 157 -6.372 13.467 7.358 1.00 25.07 O HETATM 2419 O HOH B 158 -2.192 18.569 11.493 1.00 31.86 O HETATM 2420 O HOH B 159 -15.152 3.505 10.314 1.00 27.39 O HETATM 2421 O HOH B 160 -3.727 15.539 17.636 1.00 30.56 O HETATM 2422 O HOH B 161 -11.445 2.164 -2.399 1.00 29.25 O HETATM 2423 O HOH B 162 -8.294 19.436 7.317 1.00 38.28 O HETATM 2424 O HOH B 163 -2.872 16.047 13.061 1.00 35.46 O HETATM 2425 O HOH B 164 -5.573 16.767 -10.456 1.00 32.72 O HETATM 2426 O HOH B 165 -3.410 11.235 -11.286 1.00 36.50 O HETATM 2427 O HOH B 166 6.419 7.451 -5.403 1.00 32.91 O HETATM 2428 O HOH B 167 -1.001 3.152 21.088 1.00 41.15 O HETATM 2429 O HOH B 168 -13.029 19.580 -1.078 1.00 22.32 O HETATM 2430 O HOH B 169 10.046 17.201 0.816 1.00 25.91 O HETATM 2431 O HOH B 170 5.342 12.465 21.242 1.00 38.53 O HETATM 2432 O HOH B 171 -2.916 11.295 12.963 1.00 24.75 O HETATM 2433 O HOH B 172 -3.965 7.112 16.550 1.00 31.15 O HETATM 2434 O HOH B 173 2.798 17.413 -1.322 1.00 21.90 O HETATM 2435 O HOH B 174 1.212 8.669 -12.924 1.00 41.41 O HETATM 2436 O HOH B 175 7.448 21.670 11.838 1.00 23.70 O HETATM 2437 O HOH B 176 8.779 3.564 7.986 1.00 49.77 O HETATM 2438 O HOH B 177 5.157 19.818 12.794 1.00 23.89 O HETATM 2439 O HOH B 178 -8.278 20.088 -5.764 1.00 21.15 O HETATM 2440 O HOH B 179 1.482 -1.877 0.107 1.00 35.10 O HETATM 2441 O HOH B 180 1.222 1.552 -9.141 1.00 44.39 O HETATM 2442 O HOH B 181 -6.638 16.029 -6.047 1.00 22.71 O HETATM 2443 O HOH B 182 -10.256 8.876 9.750 1.00 32.62 O HETATM 2444 O HOH B 183 -13.073 12.826 16.303 1.00 42.00 O HETATM 2445 O HOH B 184 -10.612 11.478 3.345 1.00 18.59 O HETATM 2446 O HOH B 185 11.987 20.458 12.942 1.00 20.60 O HETATM 2447 O HOH B 186 12.429 21.027 6.495 1.00 41.96 O HETATM 2448 O HOH B 187 16.307 16.593 3.563 1.00 28.53 O HETATM 2449 O HOH B 188 9.417 10.479 -2.091 1.00 17.97 O HETATM 2450 O HOH B 189 9.817 10.794 -6.831 1.00 16.88 O HETATM 2451 O HOH B 190 -7.689 23.905 6.140 1.00 42.44 O HETATM 2452 O HOH B 191 -7.182 25.275 2.618 1.00 30.20 O HETATM 2453 O HOH B 192 9.478 2.663 -4.001 1.00 30.46 O HETATM 2454 O HOH B 193 -7.511 17.116 7.418 1.00 17.12 O HETATM 2455 O HOH B 194 -3.646 29.120 6.915 1.00 34.07 O HETATM 2456 O HOH B 195 0.045 28.875 6.557 1.00 39.37 O HETATM 2457 O HOH B 196 6.339 22.667 1.276 1.00 27.85 O HETATM 2458 O HOH B 197 -7.029 18.605 18.566 1.00 47.65 O HETATM 2459 O HOH B 198 -10.296 -0.055 -4.323 1.00 11.68 O HETATM 2460 O HOH B 199 8.273 9.003 -4.407 1.00 35.16 O HETATM 2461 O HOH B 200 1.461 14.815 -7.862 1.00 39.00 O HETATM 2462 O HOH B 201 2.495 19.925 -2.187 1.00 31.75 O HETATM 2463 O HOH B 202 -5.925 25.523 4.997 1.00 40.96 O HETATM 2464 O HOH B 203 -7.275 29.441 3.972 1.00 24.69 O HETATM 2465 O HOH B 204 -10.641 18.333 6.551 1.00 39.63 O HETATM 2466 O HOH B 205 -5.143 -4.952 -9.395 1.00 31.27 O HETATM 2467 O HOH B 206 -4.615 -13.211 0.285 1.00 35.83 O HETATM 2468 O HOH B 207 9.196 6.359 -0.670 1.00 27.50 O HETATM 2469 O HOH B 208 12.785 8.702 2.690 1.00 30.09 O HETATM 2470 O HOH B 209 -5.363 21.848 -9.813 1.00 35.81 O HETATM 2471 O HOH B 210 2.872 22.933 9.727 1.00 43.43 O HETATM 2472 O HOH B 211 12.791 14.153 14.546 1.00 31.07 O HETATM 2473 O HOH B 212 15.276 15.624 10.909 1.00 33.28 O HETATM 2474 O HOH B 213 18.079 13.044 10.659 1.00 61.97 O HETATM 2475 O HOH B 214 14.120 20.415 11.035 1.00 26.26 O HETATM 2476 O HOH B 215 11.684 11.935 17.957 1.00 35.20 O HETATM 2477 O HOH B 216 3.083 20.386 -6.354 1.00 38.43 O HETATM 2478 O HOH B 217 7.928 13.241 -9.348 1.00 31.90 O HETATM 2479 O HOH B 218 -0.235 17.841 -11.067 1.00 38.06 O HETATM 2480 O HOH B 219 -11.783 16.210 11.541 1.00 30.05 O HETATM 2481 O HOH B 220 -4.892 -2.234 -12.028 1.00 50.49 O HETATM 2482 O HOH B 221 9.845 21.465 5.805 1.00 26.66 O HETATM 2483 O HOH B 222 -15.238 21.509 -1.333 1.00 23.72 O HETATM 2484 O HOH B 223 3.567 19.433 0.273 1.00 24.40 O HETATM 2485 O HOH B 224 -15.423 14.719 10.893 1.00 47.64 O HETATM 2486 O HOH B 225 -0.857 14.971 19.543 1.00 53.03 O HETATM 2487 O HOH B 226 -15.270 20.068 6.387 1.00 26.49 O HETATM 2488 O HOH B 227 -6.266 9.707 16.017 1.00 13.91 O HETATM 2489 O HOH B 229 -11.311 2.758 20.863 1.00 30.23 O HETATM 2490 O HOH B 230 -3.744 -3.862 17.008 1.00 24.66 O HETATM 2491 O HOH B 231 -9.393 -0.270 -12.886 1.00 45.51 O HETATM 2492 O HOH B 232 -16.890 14.137 8.229 1.00 49.82 O HETATM 2493 O HOH B 233 3.407 -5.770 -0.454 1.00 39.52 O MASTER 360 0 0 18 14 0 0 6 2491 2 0 26 END