HEADER TRANSFERASE 14-AUG-08 3E5Y TITLE CRYSTAL STRUCTURE OF TRMH FAMILY RNA METHYLTRANSFERASE FROM TITLE 2 BURKHOLDERIA PSEUDOMALLEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRMH FAMILY RNA METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RNA METHYLTRANSFERASE, TRMH FAMILY, GROUP 2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI 305; SOURCE 3 ORGANISM_TAXID: 425067; SOURCE 4 GENE: BURPS305_4843; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: AVA0421 KEYWDS SSGCID, PROTEIN KNOT, DECODE, RNA METHYLTRANSFERASE, KEYWDS 2 METHYLTRANSFERASE, TRANSFERASE, STRUCTURAL GENOMICS, SEATTLE KEYWDS 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 30-AUG-23 3E5Y 1 REMARK REVDAT 3 25-OCT-17 3E5Y 1 REMARK REVDAT 2 24-FEB-09 3E5Y 1 VERSN REVDAT 1 26-AUG-08 3E5Y 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF TRMH FAMILY RNA METHYLTRANSFERASE FROM JRNL TITL 2 BURKHOLDERIA PSEUDOMALLEI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 12162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 592 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 802 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2329 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.64000 REMARK 3 B22 (A**2) : -0.97000 REMARK 3 B33 (A**2) : 2.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.669 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.283 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.203 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.678 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2407 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1690 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3272 ; 1.724 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4025 ; 1.475 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 294 ;15.244 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;28.178 ;21.825 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 350 ;17.969 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.612 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 339 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2756 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 570 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1483 ; 0.846 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 593 ; 0.153 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2375 ; 1.574 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 924 ; 2.315 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 897 ; 3.743 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3E5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000048916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12194 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.65200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1J85 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PACT SPARSE MATRIX SCREEN G10 AND H10; REMARK 280 20% PEG 3350, 0.2 M SODIUM/POTASSIUM PHOSPHATE, 0.1 M BISTRIS REMARK 280 PROPANE, PH 7.5 OR 8.5; 27.6 MG/ML PROTEIN; CRYSTAL ID 109613H10, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.36200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.44100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.26600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.44100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.36200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.26600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ASP B 41 REMARK 465 ALA B 42 REMARK 465 LYS B 43 REMARK 465 MET B 44 REMARK 465 ARG B 45 REMARK 465 ARG B 46 REMARK 465 ALA B 47 REMARK 465 GLY B 48 REMARK 465 LEU B 49 REMARK 465 ASP B 50 REMARK 465 TYR B 51 REMARK 465 HIS B 52 REMARK 465 GLU B 53 REMARK 465 TYR B 54 REMARK 465 ALA B 55 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 28 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 131 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 14 OE1 GLU A 104 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 152 CE2 PHE A 152 CD2 -0.121 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 33 -179.64 -60.99 REMARK 500 GLN A 56 55.96 -100.82 REMARK 500 ASP A 62 -178.29 -172.44 REMARK 500 ASN A 130 -98.89 -177.47 REMARK 500 ARG A 131 -178.58 -175.71 REMARK 500 ALA B 71 59.53 37.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 33 PRO A 34 -44.52 REMARK 500 GLY B 129 ASN B 130 -86.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 33 -10.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUPSA.00072.A RELATED DB: TARGETDB DBREF 3E5Y A 1 156 UNP A4LJP7 A4LJP7_BURPS 24 179 DBREF 3E5Y B 1 156 UNP A4LJP7 A4LJP7_BURPS 24 179 SEQADV 3E5Y GLY A -3 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y PRO A -2 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y GLY A -1 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y SER A 0 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y GLY B -3 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y PRO B -2 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y GLY B -1 UNP A4LJP7 EXPRESSION TAG SEQADV 3E5Y SER B 0 UNP A4LJP7 EXPRESSION TAG SEQRES 1 A 160 GLY PRO GLY SER MET PHE ASN VAL VAL LEU VAL GLU PRO SEQRES 2 A 160 GLU ILE PRO PRO ASN THR GLY ASN VAL ILE ARG LEU CYS SEQRES 3 A 160 ALA ASN THR GLY ALA ARG LEU HIS LEU ILE GLU PRO LEU SEQRES 4 A 160 GLY PHE PRO LEU ASP ASP ALA LYS MET ARG ARG ALA GLY SEQRES 5 A 160 LEU ASP TYR HIS GLU TYR ALA GLN MET ARG VAL HIS ARG SEQRES 6 A 160 ASP TRP ASP ALA PHE VAL ALA ALA GLU ALA PRO ASP PRO SEQRES 7 A 160 ALA ARG MET PHE ALA PHE THR THR ARG GLY SER GLY ARG SEQRES 8 A 160 PHE HIS ASP ARG ALA PHE GLU PRO GLY ASP TRP PHE VAL SEQRES 9 A 160 PHE GLY ALA GLU THR ARG GLY LEU ALA PRO ALA LEU VAL SEQRES 10 A 160 ASP ARG PHE ALA PRO GLU GLN ARG VAL ARG LEU PRO MET SEQRES 11 A 160 ARG PRO GLY ASN ARG SER LEU ASN LEU SER ASN THR VAL SEQRES 12 A 160 ALA VAL VAL VAL PHE GLU ALA TRP ARG GLN ALA GLY PHE SEQRES 13 A 160 GLU GLY GLY ALA SEQRES 1 B 160 GLY PRO GLY SER MET PHE ASN VAL VAL LEU VAL GLU PRO SEQRES 2 B 160 GLU ILE PRO PRO ASN THR GLY ASN VAL ILE ARG LEU CYS SEQRES 3 B 160 ALA ASN THR GLY ALA ARG LEU HIS LEU ILE GLU PRO LEU SEQRES 4 B 160 GLY PHE PRO LEU ASP ASP ALA LYS MET ARG ARG ALA GLY SEQRES 5 B 160 LEU ASP TYR HIS GLU TYR ALA GLN MET ARG VAL HIS ARG SEQRES 6 B 160 ASP TRP ASP ALA PHE VAL ALA ALA GLU ALA PRO ASP PRO SEQRES 7 B 160 ALA ARG MET PHE ALA PHE THR THR ARG GLY SER GLY ARG SEQRES 8 B 160 PHE HIS ASP ARG ALA PHE GLU PRO GLY ASP TRP PHE VAL SEQRES 9 B 160 PHE GLY ALA GLU THR ARG GLY LEU ALA PRO ALA LEU VAL SEQRES 10 B 160 ASP ARG PHE ALA PRO GLU GLN ARG VAL ARG LEU PRO MET SEQRES 11 B 160 ARG PRO GLY ASN ARG SER LEU ASN LEU SER ASN THR VAL SEQRES 12 B 160 ALA VAL VAL VAL PHE GLU ALA TRP ARG GLN ALA GLY PHE SEQRES 13 B 160 GLU GLY GLY ALA FORMUL 3 HOH *162(H2 O) HELIX 1 1 ILE A 11 GLY A 26 1 16 HELIX 2 2 ASP A 40 ALA A 47 1 8 HELIX 3 3 ASP A 50 GLN A 56 1 7 HELIX 4 4 ASP A 62 ALA A 71 1 10 HELIX 5 5 ASP A 73 ALA A 75 5 3 HELIX 6 6 HIS A 89 ARG A 91 5 3 HELIX 7 7 ALA A 109 ASP A 114 1 6 HELIX 8 8 ARG A 115 PHE A 116 5 2 HELIX 9 9 ALA A 117 GLU A 119 5 3 HELIX 10 10 ASN A 134 ALA A 150 1 17 HELIX 11 11 ILE B 11 GLY B 26 1 16 HELIX 12 12 ASP B 62 ALA B 71 1 10 HELIX 13 13 ASP B 73 ALA B 75 5 3 HELIX 14 14 HIS B 89 ARG B 91 5 3 HELIX 15 15 ALA B 109 ASP B 114 1 6 HELIX 16 16 ARG B 115 PHE B 116 5 2 HELIX 17 17 ALA B 117 GLU B 119 5 3 HELIX 18 18 ASN B 134 ALA B 150 1 17 SHEET 1 A 7 ARG A 58 HIS A 60 0 SHEET 2 A 7 ARG A 28 ILE A 32 1 N LEU A 31 O HIS A 60 SHEET 3 A 7 ASN A 3 VAL A 7 1 N VAL A 4 O HIS A 30 SHEET 4 A 7 TRP A 98 GLY A 102 1 O PHE A 101 N VAL A 5 SHEET 5 A 7 MET A 77 PHE A 80 1 N PHE A 78 O VAL A 100 SHEET 6 A 7 ARG A 121 ARG A 123 1 O VAL A 122 N ALA A 79 SHEET 7 A 7 GLY A 86 ARG A 87 1 N GLY A 86 O ARG A 123 SHEET 1 B 7 MET B 57 HIS B 60 0 SHEET 2 B 7 ARG B 28 ILE B 32 1 N LEU B 31 O HIS B 60 SHEET 3 B 7 ASN B 3 VAL B 7 1 N LEU B 6 O ILE B 32 SHEET 4 B 7 TRP B 98 GLY B 102 1 O PHE B 101 N VAL B 5 SHEET 5 B 7 MET B 77 PHE B 80 1 N PHE B 78 O VAL B 100 SHEET 6 B 7 ARG B 121 ARG B 123 1 O VAL B 122 N ALA B 79 SHEET 7 B 7 GLY B 86 ARG B 87 1 N GLY B 86 O ARG B 121 CISPEP 1 GLY A 129 ASN A 130 0 4.13 CISPEP 2 GLU B 33 PRO B 34 0 0.17 CRYST1 46.724 80.532 80.882 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021402 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012417 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012364 0.00000