HEADER OXIDOREDUCTASE 15-AUG-08 3E6R TITLE CRYSTAL STRUCTURE OF APO-FERRITIN FROM PSEUDO-NITZSCHIA MULTISERIES COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRITIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 EC: 1.16.3.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDO-NITZSCHIA MULTISERIES; SOURCE 3 ORGANISM_TAXID: 37319; SOURCE 4 STRAIN: CLN 47; SOURCE 5 GENE: FTN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL 21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS FERRITIN, APOFERRITIN, IRON STORAGE, FERROXIDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.P.MURPHY,A.L.ARRIETA REVDAT 5 21-FEB-24 3E6R 1 REMARK SEQADV REVDAT 4 25-OCT-17 3E6R 1 REMARK REVDAT 3 02-MAR-10 3E6R 1 DBREF SEQADV REVDAT 2 24-FEB-09 3E6R 1 VERSN REVDAT 1 25-NOV-08 3E6R 0 JRNL AUTH A.MARCHETTI,M.S.PARKER,L.P.MOCCIA,E.O.LIN,A.L.ARRIETA, JRNL AUTH 2 F.RIBALET,M.E.MURPHY,M.T.MALDONADO,E.V.ARMBRUST JRNL TITL FERRITIN IS USED FOR IRON STORAGE IN BLOOM-FORMING MARINE JRNL TITL 2 PENNATE DIATOMS. JRNL REF NATURE V. 457 467 2009 JRNL REFN ISSN 0028-0836 JRNL PMID 19037243 JRNL DOI 10.1038/NATURE07539 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 51813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2628 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3670 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 190 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7515 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 716 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.341 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.257 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.159 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.606 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7682 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10458 ; 1.192 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 945 ; 5.109 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 405 ;41.292 ;25.630 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1245 ;14.688 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;15.818 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1167 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5961 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3745 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5489 ; 0.293 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 613 ; 0.183 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 138 ; 0.170 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 41 ; 0.137 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4889 ; 0.706 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7644 ; 1.233 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3195 ; 2.118 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2814 ; 3.630 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3E6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000048945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9761 REMARK 200 MONOCHROMATOR : SIDE SCATTERING I-BEAM BENT REMARK 200 SINGLE CRYSTAL; ASYMMETRIC CUT REMARK 200 4.9650 DEG. REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; SINGLE REMARK 200 CRYSTAL (SI111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING). REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52007 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.43600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M AMMONIUM SULFATE AND 0.1 M REMARK 280 AMMONIUM ACETATE PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.28600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.28600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.28600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.28600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.28600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.28600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.28600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.28600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 67050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 137820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -438.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 126.57200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 63.28600 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -63.28600 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 63.28600 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 63.28600 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 347 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 262 LIES ON A SPECIAL POSITION. REMARK 375 HOH F 286 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 LEU A 160 REMARK 465 GLY A 161 REMARK 465 PRO A 162 REMARK 465 CYS A 163 REMARK 465 LEU A 164 REMARK 465 PHE A 165 REMARK 465 ARG A 166 REMARK 465 SER A 167 REMARK 465 GLY B 0 REMARK 465 PHE B 159 REMARK 465 LEU B 160 REMARK 465 GLY B 161 REMARK 465 PRO B 162 REMARK 465 CYS B 163 REMARK 465 LEU B 164 REMARK 465 PHE B 165 REMARK 465 ARG B 166 REMARK 465 SER B 167 REMARK 465 GLY C 0 REMARK 465 PHE C 159 REMARK 465 LEU C 160 REMARK 465 GLY C 161 REMARK 465 PRO C 162 REMARK 465 CYS C 163 REMARK 465 LEU C 164 REMARK 465 PHE C 165 REMARK 465 ARG C 166 REMARK 465 SER C 167 REMARK 465 GLY D 0 REMARK 465 LEU D 160 REMARK 465 GLY D 161 REMARK 465 PRO D 162 REMARK 465 CYS D 163 REMARK 465 LEU D 164 REMARK 465 PHE D 165 REMARK 465 ARG D 166 REMARK 465 SER D 167 REMARK 465 GLY E 0 REMARK 465 PHE E 159 REMARK 465 LEU E 160 REMARK 465 GLY E 161 REMARK 465 PRO E 162 REMARK 465 CYS E 163 REMARK 465 LEU E 164 REMARK 465 PHE E 165 REMARK 465 ARG E 166 REMARK 465 SER E 167 REMARK 465 GLY F 0 REMARK 465 LEU F 160 REMARK 465 GLY F 161 REMARK 465 PRO F 162 REMARK 465 CYS F 163 REMARK 465 LEU F 164 REMARK 465 PHE F 165 REMARK 465 ARG F 166 REMARK 465 SER F 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU F 48 O HOH F 265 2.13 REMARK 500 OE2 GLU D 48 O HOH D 291 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 34 72.94 -108.77 REMARK 500 VAL A 157 -74.86 -62.94 REMARK 500 TRP B 34 69.41 -108.96 REMARK 500 ASP C 33 32.88 70.63 REMARK 500 TRP C 34 73.05 -108.38 REMARK 500 VAL C 157 -90.11 -84.47 REMARK 500 TRP D 34 73.19 -119.80 REMARK 500 TRP E 34 70.73 -109.26 REMARK 500 VAL E 157 53.18 -91.94 REMARK 500 TRP F 34 70.28 -101.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 168 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3E6S RELATED DB: PDB DBREF 3E6R A 1 167 UNP B6DMH6 B6DMH6_9STRA 63 229 DBREF 3E6R B 1 167 UNP B6DMH6 B6DMH6_9STRA 63 229 DBREF 3E6R C 1 167 UNP B6DMH6 B6DMH6_9STRA 63 229 DBREF 3E6R D 1 167 UNP B6DMH6 B6DMH6_9STRA 63 229 DBREF 3E6R E 1 167 UNP B6DMH6 B6DMH6_9STRA 63 229 DBREF 3E6R F 1 167 UNP B6DMH6 B6DMH6_9STRA 63 229 SEQADV 3E6R GLY A 0 UNP B6DMH6 EXPRESSION TAG SEQADV 3E6R GLY B 0 UNP B6DMH6 EXPRESSION TAG SEQADV 3E6R GLY C 0 UNP B6DMH6 EXPRESSION TAG SEQADV 3E6R GLY D 0 UNP B6DMH6 EXPRESSION TAG SEQADV 3E6R GLY E 0 UNP B6DMH6 EXPRESSION TAG SEQADV 3E6R GLY F 0 UNP B6DMH6 EXPRESSION TAG SEQRES 1 A 168 GLY SER GLU GLU LEU LEU ASP LEU PHE ASN ARG GLN VAL SEQRES 2 A 168 THR GLN GLU PHE THR ALA SER GLN VAL TYR LEU SER ALA SEQRES 3 A 168 SER ILE TRP PHE ASP GLN ASN ASP TRP GLU GLY MET ALA SEQRES 4 A 168 ALA TYR MET LEU ALA GLU SER ALA GLU GLU ARG GLU HIS SEQRES 5 A 168 GLY LEU GLY PHE VAL ASP PHE ALA ASN LYS ARG ASN ILE SEQRES 6 A 168 PRO ILE GLU LEU GLN ALA VAL PRO ALA PRO VAL SER CYS SEQRES 7 A 168 ALA GLU TRP SER SER PRO GLU ASP VAL TRP GLN SER ILE SEQRES 8 A 168 LEU GLU LEU GLU GLN ALA ASN THR ARG SER LEU LEU ASN SEQRES 9 A 168 LEU ALA GLU ALA ALA SER THR CYS HIS ASP PHE ALA VAL SEQRES 10 A 168 MET ALA PHE LEU ASN PRO PHE HIS LEU GLN GLN VAL ASN SEQRES 11 A 168 GLU GLU ASP LYS ILE GLY SER ILE LEU ALA LYS VAL THR SEQRES 12 A 168 ASP GLU ASN ARG THR PRO GLY LEU LEU ARG SER LEU ASP SEQRES 13 A 168 VAL VAL SER PHE LEU GLY PRO CYS LEU PHE ARG SER SEQRES 1 B 168 GLY SER GLU GLU LEU LEU ASP LEU PHE ASN ARG GLN VAL SEQRES 2 B 168 THR GLN GLU PHE THR ALA SER GLN VAL TYR LEU SER ALA SEQRES 3 B 168 SER ILE TRP PHE ASP GLN ASN ASP TRP GLU GLY MET ALA SEQRES 4 B 168 ALA TYR MET LEU ALA GLU SER ALA GLU GLU ARG GLU HIS SEQRES 5 B 168 GLY LEU GLY PHE VAL ASP PHE ALA ASN LYS ARG ASN ILE SEQRES 6 B 168 PRO ILE GLU LEU GLN ALA VAL PRO ALA PRO VAL SER CYS SEQRES 7 B 168 ALA GLU TRP SER SER PRO GLU ASP VAL TRP GLN SER ILE SEQRES 8 B 168 LEU GLU LEU GLU GLN ALA ASN THR ARG SER LEU LEU ASN SEQRES 9 B 168 LEU ALA GLU ALA ALA SER THR CYS HIS ASP PHE ALA VAL SEQRES 10 B 168 MET ALA PHE LEU ASN PRO PHE HIS LEU GLN GLN VAL ASN SEQRES 11 B 168 GLU GLU ASP LYS ILE GLY SER ILE LEU ALA LYS VAL THR SEQRES 12 B 168 ASP GLU ASN ARG THR PRO GLY LEU LEU ARG SER LEU ASP SEQRES 13 B 168 VAL VAL SER PHE LEU GLY PRO CYS LEU PHE ARG SER SEQRES 1 C 168 GLY SER GLU GLU LEU LEU ASP LEU PHE ASN ARG GLN VAL SEQRES 2 C 168 THR GLN GLU PHE THR ALA SER GLN VAL TYR LEU SER ALA SEQRES 3 C 168 SER ILE TRP PHE ASP GLN ASN ASP TRP GLU GLY MET ALA SEQRES 4 C 168 ALA TYR MET LEU ALA GLU SER ALA GLU GLU ARG GLU HIS SEQRES 5 C 168 GLY LEU GLY PHE VAL ASP PHE ALA ASN LYS ARG ASN ILE SEQRES 6 C 168 PRO ILE GLU LEU GLN ALA VAL PRO ALA PRO VAL SER CYS SEQRES 7 C 168 ALA GLU TRP SER SER PRO GLU ASP VAL TRP GLN SER ILE SEQRES 8 C 168 LEU GLU LEU GLU GLN ALA ASN THR ARG SER LEU LEU ASN SEQRES 9 C 168 LEU ALA GLU ALA ALA SER THR CYS HIS ASP PHE ALA VAL SEQRES 10 C 168 MET ALA PHE LEU ASN PRO PHE HIS LEU GLN GLN VAL ASN SEQRES 11 C 168 GLU GLU ASP LYS ILE GLY SER ILE LEU ALA LYS VAL THR SEQRES 12 C 168 ASP GLU ASN ARG THR PRO GLY LEU LEU ARG SER LEU ASP SEQRES 13 C 168 VAL VAL SER PHE LEU GLY PRO CYS LEU PHE ARG SER SEQRES 1 D 168 GLY SER GLU GLU LEU LEU ASP LEU PHE ASN ARG GLN VAL SEQRES 2 D 168 THR GLN GLU PHE THR ALA SER GLN VAL TYR LEU SER ALA SEQRES 3 D 168 SER ILE TRP PHE ASP GLN ASN ASP TRP GLU GLY MET ALA SEQRES 4 D 168 ALA TYR MET LEU ALA GLU SER ALA GLU GLU ARG GLU HIS SEQRES 5 D 168 GLY LEU GLY PHE VAL ASP PHE ALA ASN LYS ARG ASN ILE SEQRES 6 D 168 PRO ILE GLU LEU GLN ALA VAL PRO ALA PRO VAL SER CYS SEQRES 7 D 168 ALA GLU TRP SER SER PRO GLU ASP VAL TRP GLN SER ILE SEQRES 8 D 168 LEU GLU LEU GLU GLN ALA ASN THR ARG SER LEU LEU ASN SEQRES 9 D 168 LEU ALA GLU ALA ALA SER THR CYS HIS ASP PHE ALA VAL SEQRES 10 D 168 MET ALA PHE LEU ASN PRO PHE HIS LEU GLN GLN VAL ASN SEQRES 11 D 168 GLU GLU ASP LYS ILE GLY SER ILE LEU ALA LYS VAL THR SEQRES 12 D 168 ASP GLU ASN ARG THR PRO GLY LEU LEU ARG SER LEU ASP SEQRES 13 D 168 VAL VAL SER PHE LEU GLY PRO CYS LEU PHE ARG SER SEQRES 1 E 168 GLY SER GLU GLU LEU LEU ASP LEU PHE ASN ARG GLN VAL SEQRES 2 E 168 THR GLN GLU PHE THR ALA SER GLN VAL TYR LEU SER ALA SEQRES 3 E 168 SER ILE TRP PHE ASP GLN ASN ASP TRP GLU GLY MET ALA SEQRES 4 E 168 ALA TYR MET LEU ALA GLU SER ALA GLU GLU ARG GLU HIS SEQRES 5 E 168 GLY LEU GLY PHE VAL ASP PHE ALA ASN LYS ARG ASN ILE SEQRES 6 E 168 PRO ILE GLU LEU GLN ALA VAL PRO ALA PRO VAL SER CYS SEQRES 7 E 168 ALA GLU TRP SER SER PRO GLU ASP VAL TRP GLN SER ILE SEQRES 8 E 168 LEU GLU LEU GLU GLN ALA ASN THR ARG SER LEU LEU ASN SEQRES 9 E 168 LEU ALA GLU ALA ALA SER THR CYS HIS ASP PHE ALA VAL SEQRES 10 E 168 MET ALA PHE LEU ASN PRO PHE HIS LEU GLN GLN VAL ASN SEQRES 11 E 168 GLU GLU ASP LYS ILE GLY SER ILE LEU ALA LYS VAL THR SEQRES 12 E 168 ASP GLU ASN ARG THR PRO GLY LEU LEU ARG SER LEU ASP SEQRES 13 E 168 VAL VAL SER PHE LEU GLY PRO CYS LEU PHE ARG SER SEQRES 1 F 168 GLY SER GLU GLU LEU LEU ASP LEU PHE ASN ARG GLN VAL SEQRES 2 F 168 THR GLN GLU PHE THR ALA SER GLN VAL TYR LEU SER ALA SEQRES 3 F 168 SER ILE TRP PHE ASP GLN ASN ASP TRP GLU GLY MET ALA SEQRES 4 F 168 ALA TYR MET LEU ALA GLU SER ALA GLU GLU ARG GLU HIS SEQRES 5 F 168 GLY LEU GLY PHE VAL ASP PHE ALA ASN LYS ARG ASN ILE SEQRES 6 F 168 PRO ILE GLU LEU GLN ALA VAL PRO ALA PRO VAL SER CYS SEQRES 7 F 168 ALA GLU TRP SER SER PRO GLU ASP VAL TRP GLN SER ILE SEQRES 8 F 168 LEU GLU LEU GLU GLN ALA ASN THR ARG SER LEU LEU ASN SEQRES 9 F 168 LEU ALA GLU ALA ALA SER THR CYS HIS ASP PHE ALA VAL SEQRES 10 F 168 MET ALA PHE LEU ASN PRO PHE HIS LEU GLN GLN VAL ASN SEQRES 11 F 168 GLU GLU ASP LYS ILE GLY SER ILE LEU ALA LYS VAL THR SEQRES 12 F 168 ASP GLU ASN ARG THR PRO GLY LEU LEU ARG SER LEU ASP SEQRES 13 F 168 VAL VAL SER PHE LEU GLY PRO CYS LEU PHE ARG SER HET SO4 B 168 5 HET SO4 C 168 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 2(O4 S 2-) FORMUL 9 HOH *716(H2 O) HELIX 1 1 SER A 1 ASN A 32 1 32 HELIX 2 2 TRP A 34 ARG A 62 1 29 HELIX 3 3 VAL A 75 TRP A 80 5 6 HELIX 4 4 SER A 82 CYS A 111 1 30 HELIX 5 5 ASP A 113 ASN A 145 1 33 HELIX 6 6 GLY A 149 VAL A 157 1 9 HELIX 7 7 SER B 1 ASN B 32 1 32 HELIX 8 8 TRP B 34 ARG B 62 1 29 HELIX 9 9 VAL B 75 GLU B 79 5 5 HELIX 10 10 SER B 82 CYS B 111 1 30 HELIX 11 11 ASP B 113 ASN B 145 1 33 HELIX 12 12 GLY B 149 VAL B 156 1 8 HELIX 13 13 SER C 1 ASN C 32 1 32 HELIX 14 14 TRP C 34 ARG C 62 1 29 HELIX 15 15 VAL C 75 GLU C 79 5 5 HELIX 16 16 SER C 82 CYS C 111 1 30 HELIX 17 17 ASP C 113 ASN C 145 1 33 HELIX 18 18 GLY C 149 VAL C 157 1 9 HELIX 19 19 SER D 1 ASN D 32 1 32 HELIX 20 20 TRP D 34 ARG D 62 1 29 HELIX 21 21 VAL D 75 GLU D 79 5 5 HELIX 22 22 SER D 82 CYS D 111 1 30 HELIX 23 23 ASP D 113 ASN D 145 1 33 HELIX 24 24 GLY D 149 PHE D 159 1 11 HELIX 25 25 SER E 1 ASN E 32 1 32 HELIX 26 26 TRP E 34 ARG E 62 1 29 HELIX 27 27 VAL E 75 GLU E 79 5 5 HELIX 28 28 SER E 82 CYS E 111 1 30 HELIX 29 29 ASP E 113 ASN E 145 1 33 HELIX 30 30 GLY E 149 VAL E 157 1 9 HELIX 31 31 SER F 1 ASN F 32 1 32 HELIX 32 32 TRP F 34 ARG F 62 1 29 HELIX 33 33 VAL F 75 TRP F 80 5 6 HELIX 34 34 SER F 82 CYS F 111 1 30 HELIX 35 35 ASP F 113 ASN F 145 1 33 HELIX 36 36 GLY F 149 PHE F 159 1 11 SITE 1 AC1 6 ASN A 121 ASN B 121 HOH B 184 HOH B 284 SITE 2 AC1 6 ASN F 121 HOH F 188 SITE 1 AC2 6 ASN C 121 HOH C 237 HOH C 269 ASN D 121 SITE 2 AC2 6 HOH D 191 ASN E 121 CRYST1 126.572 126.572 170.700 90.00 90.00 90.00 P 4 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007901 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005858 0.00000