HEADER PLANT PROTEIN 19-AUG-08 3E85 TITLE CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR-10.2B FROM TITLE 2 YELLOW LUPINE IN COMPLEX WITH DIPHENYLUREA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PR10.2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLASS 10 PLANT PATHOGENESIS-RELATED PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LUPINUS LUTEUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN YELLOW LUPIN; SOURCE 4 ORGANISM_TAXID: 3873; SOURCE 5 GENE: PR10.2B, YPR10.2B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS PLANT HORMONES, CYTOKININ, DIPHENYLUREA, PLANT PR-10 PROTEIN, YELLOW KEYWDS 2 LUPINE, PATHOGENESIS-RELATED PROTEIN, PLANT DEFENSE, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.C.FERNANDES,G.BUJACZ,A.BUJACZ,M.M.SIKORSKI,M.JASKOLSKI REVDAT 5 30-AUG-23 3E85 1 REMARK REVDAT 4 23-FEB-22 3E85 1 JRNL REMARK LINK REVDAT 3 13-JUL-11 3E85 1 VERSN REVDAT 2 02-JUN-09 3E85 1 JRNL REVDAT 1 03-MAR-09 3E85 0 JRNL AUTH H.FERNANDES,A.BUJACZ,G.BUJACZ,F.JELEN,M.JASINSKI, JRNL AUTH 2 P.KACHLICKI,J.OTLEWSKI,M.M.SIKORSKI,M.JASKOLSKI JRNL TITL CYTOKININ-INDUCED STRUCTURAL ADAPTABILITY OF A LUPINUS JRNL TITL 2 LUTEUS PR-10 PROTEIN. JRNL REF FEBS J. V. 276 1596 2009 JRNL REFN ISSN 1742-464X JRNL PMID 19220853 JRNL DOI 10.1111/J.1742-4658.2009.06892.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.FERNANDES,O.PASTERNAK,G.BUJACZ,A.BUJACZ,M.M.SIKORSKI, REMARK 1 AUTH 2 M.JASKOLSKI REMARK 1 TITL LUPINUS LUTEUS PATHOGENESIS-RELATED PROTEIN AS A RESERVOIR REMARK 1 TITL 2 FOR CYTOKININ REMARK 1 REF J.MOL.BIOL. V. 378 1040 2008 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 18406424 REMARK 1 DOI 10.1016/J.JMB.2008.03.027 REMARK 1 REFERENCE 2 REMARK 1 AUTH O.PASTERNAK,J.BIESIADKA,R.DOLOT,L.HANDSCHUH,G.BUJACZ, REMARK 1 AUTH 2 M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL STRUCTURE OF A YELLOW LUPIN PATHOGENESIS-RELATED PR-10 REMARK 1 TITL 2 PROTEIN BELONGING TO A NOVEL SUBCLASS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 61 99 2005 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15608381 REMARK 1 DOI 10.1107/S0907444904028173 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.BIESIADKA,G.BUJACZ,M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURES OF TWO HOMOLOGOUS PATHOGENESIS-RELATED REMARK 1 TITL 2 PROTEINS FROM YELLOW LUPINE REMARK 1 REF J.MOL.BIOL. V. 319 1223 2002 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 12079359 REMARK 1 DOI 10.1016/S0022-2836(02)00385-6 REMARK 1 REFERENCE 4 REMARK 1 AUTH O.PASTERNAK,G.D.BUJACZ,Y.FUJIMOTO,Y.HASHIMOTO,F.JELEN, REMARK 1 AUTH 2 J.OTLEWSKI,M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURE OF VIGNA RADIATA CYTOKININ-SPECIFIC REMARK 1 TITL 2 BINDING PROTEIN IN COMPLEX WITH ZEATIN REMARK 1 REF PLANT CELL V. 18 2622 2006 REMARK 1 REFN ISSN 1040-4651 REMARK 1 PMID 16998071 REMARK 1 DOI 10.1105/TPC.105.037119 REMARK 1 REFERENCE 5 REMARK 1 AUTH M.GAJHEDE,P.OSMARK,F.M.POULSEN,H.IPSEN,J.N.LARSEN, REMARK 1 AUTH 2 R.J.JOOST VAN NEERVEN,C.SCHOU,H.LOWENSTEIN,M.D.SPANGFORT REMARK 1 TITL X-RAY AND NMR STRUCTURE OF BET V 1, THE ORIGIN OF BIRCH REMARK 1 TITL 2 POLLEN ALLERGY REMARK 1 REF NAT.STRUCT.MOL.BIOL. V. 3 1040 1996 REMARK 1 REFN ISSN 1545-9993 REMARK 1 PMID 8946858 REMARK 1 REFERENCE 6 REMARK 1 AUTH Z.MARKOVI-HOUSLEY,M.DEGANO,D.LAMBA,E.VON ROEPENACK-LAHAYE, REMARK 1 AUTH 2 S.CLEMENS,M.SUSANI,F.FERREIRA,O.SCHEINER,H.BREITENEDER REMARK 1 TITL CRYSTAL STRUCTURE OF A HYPOALLERGENIC ISOFORM OF THE MAJOR REMARK 1 TITL 2 BIRCH POLLEN ALLERGEN BET V 1 AND ITS LIKELY BIOLOGICAL REMARK 1 TITL 3 FUNCTION AS A PLANT STEROID CARRIER REMARK 1 REF J.MOL.BIOL. V. 325 123 2003 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 12473456 REMARK 1 DOI 10.1016/S0022-2836(02)01197-X REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 8631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.100 REMARK 3 FREE R VALUE TEST SET COUNT : 860 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 601 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1155 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 134 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 37.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.66000 REMARK 3 B22 (A**2) : -1.34000 REMARK 3 B33 (A**2) : 3.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.249 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.931 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1257 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 833 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1692 ; 1.878 ; 2.026 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2049 ; 0.941 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 153 ; 6.214 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 48 ;34.895 ;26.458 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 210 ;16.875 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 5.890 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 186 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1398 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 251 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 277 ; 0.244 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 840 ; 0.211 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 620 ; 0.195 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 656 ; 0.096 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 89 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.192 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.157 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 43 ; 0.144 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.217 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 760 ; 1.044 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 319 ; 0.241 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1225 ; 1.850 ; 2.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 506 ; 4.229 ; 5.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 467 ; 6.456 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 86 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5917 10.2150 59.8226 REMARK 3 T TENSOR REMARK 3 T11: -0.0758 T22: -0.0807 REMARK 3 T33: -0.1661 T12: -0.0084 REMARK 3 T13: 0.0448 T23: 0.0452 REMARK 3 L TENSOR REMARK 3 L11: 3.1419 L22: 1.5463 REMARK 3 L33: 1.4733 L12: -0.2883 REMARK 3 L13: 0.4635 L23: 1.4187 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: 0.1037 S13: -0.1020 REMARK 3 S21: -0.1020 S22: 0.0707 S23: -0.2359 REMARK 3 S31: 0.0513 S32: 0.0884 S33: -0.0835 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 87 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3552 9.8221 64.2164 REMARK 3 T TENSOR REMARK 3 T11: -0.1356 T22: -0.1134 REMARK 3 T33: -0.2220 T12: 0.0205 REMARK 3 T13: 0.0549 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 3.6600 L22: 4.4178 REMARK 3 L33: 2.5481 L12: 1.6256 REMARK 3 L13: 1.4310 L23: 1.1194 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: 0.1313 S13: -0.3712 REMARK 3 S21: 0.0793 S22: 0.0404 S23: -0.0958 REMARK 3 S31: 0.1903 S32: 0.0119 S33: -0.0690 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 158 A 161 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6901 8.3633 64.5678 REMARK 3 T TENSOR REMARK 3 T11: 0.1759 T22: 0.5462 REMARK 3 T33: 0.1976 T12: -0.0687 REMARK 3 T13: 0.0701 T23: 0.0628 REMARK 3 L TENSOR REMARK 3 L11: 4.5224 L22: 14.5124 REMARK 3 L33: 14.6829 L12: 3.9097 REMARK 3 L13: 7.6412 L23: 2.1643 REMARK 3 S TENSOR REMARK 3 S11: 0.5927 S12: -0.9092 S13: -1.0674 REMARK 3 S21: 0.0618 S22: -0.5033 S23: -1.0883 REMARK 3 S31: 0.6686 S32: -0.1093 S33: -0.0894 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3E85 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000048995. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.81 REMARK 200 MONOCHROMATOR : SI [111], HORIZONTALLY FOCUSSING REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9529 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2QIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M SODIUM CITRATE, 0.1 M CITRATE REMARK 280 BUFFER, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.97800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.97800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 17.18100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.62800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 17.18100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.62800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.97800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 17.18100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.62800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.97800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 17.18100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 36.62800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 205 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ASP A 155 REMARK 465 TYR A 156 REMARK 465 ASN A 157 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 23 -67.72 -130.03 REMARK 500 LEU A 90 73.77 -118.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 162 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 31 O REMARK 620 2 VAL A 34 O 97.1 REMARK 620 3 ILE A 37 O 101.7 75.6 REMARK 620 4 HOH A 209 O 87.3 99.1 169.9 REMARK 620 5 HOH A 226 O 156.0 106.2 89.8 83.5 REMARK 620 6 HOH A 259 O 89.9 163.0 87.9 96.6 69.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 163 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 121 O REMARK 620 2 THR A 121 OG1 75.1 REMARK 620 3 GLY A 123 O 95.1 105.2 REMARK 620 4 HOH A 229 O 162.4 90.7 98.7 REMARK 620 5 HOH A 231 O 79.3 90.4 161.6 90.7 REMARK 620 6 HOH A 246 O 90.9 165.9 77.1 102.8 85.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BSU A 158 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BSU A 159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BSU A 160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BSU A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 163 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QIM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR-10.2B FROM REMARK 900 YELLOW LUPINE IN COMPLEX WITH CYTOKININ REMARK 900 RELATED ID: 1XDF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR-10.2A FROM REMARK 900 YELLOW LUPINE REMARK 900 RELATED ID: 1ICX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1A FROM REMARK 900 YELLOW LUPINE REMARK 900 RELATED ID: 1IFV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1B FROM REMARK 900 YELLOW LUPINE REMARK 900 RELATED ID: 2FLH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOKININ-SPECIFIC BINDING PROTEIN FROM MUNG REMARK 900 BEAN IN COMPLEX WITH CYTOKININ REMARK 900 RELATED ID: 1BV1 RELATED DB: PDB REMARK 900 BIRCH POLLEN ALLERGEN BET V 1 DBREF 3E85 A 0 157 UNP Q9LLQ2 Q9LLQ2_LUPLU 1 158 SEQRES 1 A 158 MET GLY VAL PHE THR PHE GLN ASP GLU TYR THR SER THR SEQRES 2 A 158 ILE ALA PRO ALA LYS LEU TYR LYS ALA LEU VAL THR ASP SEQRES 3 A 158 ALA ASP ILE ILE ILE PRO LYS ALA VAL GLU THR ILE GLN SEQRES 4 A 158 SER VAL GLU ILE VAL GLU GLY ASN GLY GLY PRO GLY THR SEQRES 5 A 158 ILE LYS LYS LEU THR PHE ILE GLU GLY GLY GLU SER LYS SEQRES 6 A 158 TYR VAL LEU HIS LYS ILE GLU ALA ILE ASP GLU ALA ASN SEQRES 7 A 158 LEU GLY TYR ASN TYR SER ILE VAL GLY GLY VAL GLY LEU SEQRES 8 A 158 PRO ASP THR ILE GLU LYS ILE SER PHE GLU THR LYS LEU SEQRES 9 A 158 VAL GLU GLY ALA ASN GLY GLY SER ILE GLY LYS VAL THR SEQRES 10 A 158 ILE LYS ILE GLU THR LYS GLY ASP ALA GLN PRO ASN GLU SEQRES 11 A 158 GLU GLU GLY LYS ALA ALA LYS ALA ARG GLY ASP ALA PHE SEQRES 12 A 158 PHE LYS ALA ILE GLU SER TYR LEU SER ALA HIS PRO ASP SEQRES 13 A 158 TYR ASN HET BSU A 158 16 HET BSU A 159 16 HET BSU A 160 16 HET BSU A 161 16 HET NA A 162 1 HET NA A 163 1 HETNAM BSU 1,3-DIPHENYLUREA HETNAM NA SODIUM ION HETSYN BSU DIPHENYLCARBAMIDE FORMUL 2 BSU 4(C13 H12 N2 O) FORMUL 6 NA 2(NA 1+) FORMUL 8 HOH *134(H2 O) HELIX 1 1 ALA A 14 VAL A 23 1 10 HELIX 2 2 ASP A 25 VAL A 34 1 10 HELIX 3 3 ALA A 107 GLY A 109 5 3 HELIX 4 4 ASN A 128 HIS A 153 1 26 SHEET 1 A 7 PHE A 3 SER A 11 0 SHEET 2 A 7 SER A 111 THR A 121 -1 O GLY A 113 N TYR A 9 SHEET 3 A 7 ILE A 94 GLU A 105 -1 N LYS A 96 O GLU A 120 SHEET 4 A 7 GLY A 79 GLY A 87 -1 N TYR A 82 O PHE A 99 SHEET 5 A 7 GLU A 62 ASP A 74 -1 N ALA A 72 O ASN A 81 SHEET 6 A 7 ILE A 52 GLU A 59 -1 N PHE A 57 O LYS A 64 SHEET 7 A 7 ILE A 37 GLU A 44 -1 N GLU A 41 O LYS A 54 LINK O PRO A 31 NA NA A 162 1555 1555 2.23 LINK O VAL A 34 NA NA A 162 1555 1555 2.47 LINK O ILE A 37 NA NA A 162 1555 1555 2.35 LINK O THR A 121 NA NA A 163 1555 1555 2.88 LINK OG1 THR A 121 NA NA A 163 1555 1555 2.52 LINK O GLY A 123 NA NA A 163 1555 1555 2.49 LINK NA NA A 162 O HOH A 209 1555 1555 2.36 LINK NA NA A 162 O HOH A 226 1555 1555 2.74 LINK NA NA A 162 O HOH A 259 1555 1555 2.68 LINK NA NA A 163 O HOH A 229 1555 1555 2.08 LINK NA NA A 163 O HOH A 231 1555 1555 2.49 LINK NA NA A 163 O HOH A 246 1555 1555 2.56 SITE 1 AC1 6 LEU A 22 LEU A 55 HIS A 68 TYR A 80 SITE 2 AC1 6 PHE A 142 HOH A 211 SITE 1 AC2 5 THR A 36 ILE A 37 LEU A 55 PHE A 57 SITE 2 AC2 5 ARG A 138 SITE 1 AC3 9 TYR A 9 LEU A 22 PHE A 99 THR A 101 SITE 2 AC3 9 GLY A 139 PHE A 143 HOH A 197 HOH A 211 SITE 3 AC3 9 HOH A 279 SITE 1 AC4 8 PHE A 5 GLY A 89 ILE A 117 GLY A 132 SITE 2 AC4 8 ALA A 135 ARG A 138 HOH A 193 HOH A 295 SITE 1 AC5 5 PRO A 31 ILE A 37 HOH A 209 HOH A 226 SITE 2 AC5 5 HOH A 259 SITE 1 AC6 5 THR A 121 GLY A 123 HOH A 229 HOH A 231 SITE 2 AC6 5 HOH A 246 CRYST1 34.362 73.256 99.956 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029102 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013651 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010004 0.00000