data_3E97 # _entry.id 3E97 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3E97 pdb_00003e97 10.2210/pdb3e97/pdb RCSB RCSB049033 ? ? WWPDB D_1000049033 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 390750 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3E97 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-08-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of transcriptional regulator of Crp/Fnr family (YP_604437.1) from DEINOCOCCUS GEOTHERMALIS DSM 11300 at 1.86 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3E97 _cell.length_a 68.000 _cell.length_b 68.000 _cell.length_c 111.450 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3E97 _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, Crp/Fnr family' 25900.938 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 188 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GVGRLDDLKRSPLFQNVPEDA(MSE)REALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIY APGVVGETAVLAHQERSASVRALTPVRTL(MSE)LHREHFELILRRHPRVLWNLAE(MSE)LARRVTFLNDELIAFGQNT EAALTHVFANLYRQRLAAGVPQPEVLPLGTQDI(MSE)ARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAALEALS FEGAETD ; _entity_poly.pdbx_seq_one_letter_code_can ;GVGRLDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGV VGETAVLAHQERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLY RQRLAAGVPQPEVLPLGTQDIMARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAALEALSFEGAETD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 390750 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 VAL n 1 3 GLY n 1 4 ARG n 1 5 LEU n 1 6 ASP n 1 7 ASP n 1 8 LEU n 1 9 LYS n 1 10 ARG n 1 11 SER n 1 12 PRO n 1 13 LEU n 1 14 PHE n 1 15 GLN n 1 16 ASN n 1 17 VAL n 1 18 PRO n 1 19 GLU n 1 20 ASP n 1 21 ALA n 1 22 MSE n 1 23 ARG n 1 24 GLU n 1 25 ALA n 1 26 LEU n 1 27 LYS n 1 28 VAL n 1 29 VAL n 1 30 THR n 1 31 GLU n 1 32 ARG n 1 33 ASN n 1 34 PHE n 1 35 GLN n 1 36 PRO n 1 37 ASP n 1 38 GLU n 1 39 LEU n 1 40 VAL n 1 41 VAL n 1 42 GLU n 1 43 GLN n 1 44 ASP n 1 45 ALA n 1 46 GLU n 1 47 GLY n 1 48 GLU n 1 49 ALA n 1 50 LEU n 1 51 HIS n 1 52 LEU n 1 53 VAL n 1 54 THR n 1 55 THR n 1 56 GLY n 1 57 VAL n 1 58 VAL n 1 59 ARG n 1 60 VAL n 1 61 SER n 1 62 ARG n 1 63 VAL n 1 64 SER n 1 65 LEU n 1 66 GLY n 1 67 GLY n 1 68 ARG n 1 69 GLU n 1 70 ARG n 1 71 VAL n 1 72 LEU n 1 73 GLY n 1 74 ASP n 1 75 ILE n 1 76 TYR n 1 77 ALA n 1 78 PRO n 1 79 GLY n 1 80 VAL n 1 81 VAL n 1 82 GLY n 1 83 GLU n 1 84 THR n 1 85 ALA n 1 86 VAL n 1 87 LEU n 1 88 ALA n 1 89 HIS n 1 90 GLN n 1 91 GLU n 1 92 ARG n 1 93 SER n 1 94 ALA n 1 95 SER n 1 96 VAL n 1 97 ARG n 1 98 ALA n 1 99 LEU n 1 100 THR n 1 101 PRO n 1 102 VAL n 1 103 ARG n 1 104 THR n 1 105 LEU n 1 106 MSE n 1 107 LEU n 1 108 HIS n 1 109 ARG n 1 110 GLU n 1 111 HIS n 1 112 PHE n 1 113 GLU n 1 114 LEU n 1 115 ILE n 1 116 LEU n 1 117 ARG n 1 118 ARG n 1 119 HIS n 1 120 PRO n 1 121 ARG n 1 122 VAL n 1 123 LEU n 1 124 TRP n 1 125 ASN n 1 126 LEU n 1 127 ALA n 1 128 GLU n 1 129 MSE n 1 130 LEU n 1 131 ALA n 1 132 ARG n 1 133 ARG n 1 134 VAL n 1 135 THR n 1 136 PHE n 1 137 LEU n 1 138 ASN n 1 139 ASP n 1 140 GLU n 1 141 LEU n 1 142 ILE n 1 143 ALA n 1 144 PHE n 1 145 GLY n 1 146 GLN n 1 147 ASN n 1 148 THR n 1 149 GLU n 1 150 ALA n 1 151 ALA n 1 152 LEU n 1 153 THR n 1 154 HIS n 1 155 VAL n 1 156 PHE n 1 157 ALA n 1 158 ASN n 1 159 LEU n 1 160 TYR n 1 161 ARG n 1 162 GLN n 1 163 ARG n 1 164 LEU n 1 165 ALA n 1 166 ALA n 1 167 GLY n 1 168 VAL n 1 169 PRO n 1 170 GLN n 1 171 PRO n 1 172 GLU n 1 173 VAL n 1 174 LEU n 1 175 PRO n 1 176 LEU n 1 177 GLY n 1 178 THR n 1 179 GLN n 1 180 ASP n 1 181 ILE n 1 182 MSE n 1 183 ALA n 1 184 ARG n 1 185 THR n 1 186 SER n 1 187 SER n 1 188 SER n 1 189 ARG n 1 190 GLU n 1 191 THR n 1 192 VAL n 1 193 SER n 1 194 ARG n 1 195 VAL n 1 196 LEU n 1 197 LYS n 1 198 ARG n 1 199 LEU n 1 200 GLU n 1 201 ALA n 1 202 HIS n 1 203 ASN n 1 204 ILE n 1 205 LEU n 1 206 GLU n 1 207 VAL n 1 208 SER n 1 209 PRO n 1 210 ARG n 1 211 SER n 1 212 VAL n 1 213 THR n 1 214 LEU n 1 215 LEU n 1 216 ASP n 1 217 LEU n 1 218 ALA n 1 219 ALA n 1 220 LEU n 1 221 GLU n 1 222 ALA n 1 223 LEU n 1 224 SER n 1 225 PHE n 1 226 GLU n 1 227 GLY n 1 228 ALA n 1 229 GLU n 1 230 THR n 1 231 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YP_604437.1, Dgeo_0968' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Deinococcus geothermalis DSM 11300' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 319795 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1IZR6_DEIGD _struct_ref.pdbx_db_accession Q1IZR6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTP VRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAAGVPQPEVLPLGTQDI MARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAALEALSFEGAETD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3E97 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 231 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1IZR6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 210 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 230 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3E97 GLY A 1 ? UNP Q1IZR6 ? ? 'expression tag' 0 1 1 3E97 VAL A 2 ? UNP Q1IZR6 ? ? 'expression tag' 1 2 1 3E97 GLY A 3 ? UNP Q1IZR6 ? ? 'expression tag' 2 3 1 3E97 ARG A 4 ? UNP Q1IZR6 ? ? 'expression tag' 3 4 1 3E97 LEU A 5 ? UNP Q1IZR6 ? ? 'expression tag' 4 5 1 3E97 ASP A 6 ? UNP Q1IZR6 ? ? 'expression tag' 5 6 1 3E97 ASP A 7 ? UNP Q1IZR6 ? ? 'expression tag' 6 7 1 3E97 LEU A 8 ? UNP Q1IZR6 ? ? 'expression tag' 7 8 1 3E97 LYS A 9 ? UNP Q1IZR6 ? ? 'expression tag' 8 9 1 3E97 ARG A 10 ? UNP Q1IZR6 ? ? 'expression tag' 9 10 1 3E97 SER A 11 ? UNP Q1IZR6 ? ? 'expression tag' 10 11 1 3E97 PRO A 12 ? UNP Q1IZR6 ? ? 'expression tag' 11 12 1 3E97 LEU A 13 ? UNP Q1IZR6 ? ? 'expression tag' 12 13 1 3E97 PHE A 14 ? UNP Q1IZR6 ? ? 'expression tag' 13 14 1 3E97 GLN A 15 ? UNP Q1IZR6 ? ? 'expression tag' 14 15 1 3E97 ASN A 16 ? UNP Q1IZR6 ? ? 'expression tag' 15 16 1 3E97 VAL A 17 ? UNP Q1IZR6 ? ? 'expression tag' 16 17 1 3E97 PRO A 18 ? UNP Q1IZR6 ? ? 'expression tag' 17 18 1 3E97 GLU A 19 ? UNP Q1IZR6 ? ? 'expression tag' 18 19 1 3E97 ASP A 20 ? UNP Q1IZR6 ? ? 'expression tag' 19 20 1 3E97 ALA A 21 ? UNP Q1IZR6 ? ? 'expression tag' 20 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3E97 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;0.2000M KAcetate, 20.0000% PEG-3350, No Buffer pH 7.8, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-08-06 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97929 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97929 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3E97 _reflns.d_resolution_high 1.86 _reflns.d_resolution_low 29.399 _reflns.number_obs 22704 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.percent_possible_obs 99.800 _reflns.B_iso_Wilson_estimate 26.147 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.840 _reflns.pdbx_redundancy 11.45 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.86 1.93 16702 ? 4376 0.631 2.430 ? ? ? ? ? 99.60 ? 1 1.93 2.00 14624 ? 3835 0.417 3.6 ? ? ? ? ? 99.80 ? 2 2.00 2.09 18056 ? 4140 0.342 5.0 ? ? ? ? ? 99.60 ? 3 2.09 2.20 22685 ? 4211 0.267 7.5 ? ? ? ? ? 99.90 ? 4 2.20 2.34 26205 ? 4308 0.218 9.7 ? ? ? ? ? 99.80 ? 5 2.34 2.52 31082 ? 4188 0.184 12.9 ? ? ? ? ? 99.90 ? 6 2.52 2.78 33300 ? 4297 0.129 17.8 ? ? ? ? ? 100.00 ? 7 2.78 3.18 32181 ? 4163 0.076 26.5 ? ? ? ? ? 100.00 ? 8 3.18 4.00 32504 ? 4193 0.043 41.8 ? ? ? ? ? 100.00 ? 9 4.00 29.399 32687 ? 4229 0.034 50.5 ? ? ? ? ? 99.70 ? 10 # _refine.entry_id 3E97 _refine.ls_d_res_high 1.860 _refine.ls_d_res_low 29.399 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.870 _refine.ls_number_reflns_obs 22645 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. 1,2-ETHANEDIOL FROM THE CRYOPROTECANT HAS BEEN MODELED. ; _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.246 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1158 _refine.B_iso_mean 30.370 _refine.aniso_B[1][1] -0.770 _refine.aniso_B[2][2] -0.770 _refine.aniso_B[3][3] 1.550 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.pdbx_overall_ESU_R 0.149 _refine.pdbx_overall_ESU_R_Free 0.140 _refine.overall_SU_ML 0.094 _refine.overall_SU_B 3.037 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.B_iso_max 72.58 _refine.B_iso_min 12.68 _refine.occupancy_max 1.00 _refine.occupancy_min 0.15 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1762 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 1958 _refine_hist.d_res_high 1.860 _refine_hist.d_res_low 29.399 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1803 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1218 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2465 1.458 1.980 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2978 0.953 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 242 3.067 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 80 31.754 23.125 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 315 10.499 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20 11.770 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 304 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2011 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 356 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 378 0.214 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1295 0.201 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 854 0.167 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 979 0.083 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 134 0.141 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.176 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 26 0.292 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 10 0.119 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1239 2.034 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 454 0.458 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1856 2.960 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 687 4.467 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 598 6.283 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.860 _refine_ls_shell.d_res_low 1.908 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.760 _refine_ls_shell.number_reflns_R_work 1547 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.247 _refine_ls_shell.R_factor_R_free 0.272 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1639 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3E97 _struct.title ;Crystal structure of transcriptional regulator of Crp/Fnr family (YP_604437.1) from DEINOCOCCUS GEOTHERMALIS DSM 11300 at 1.86 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_604437.1, transcriptional regulator, Crp/Fnr family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, DNA-binding, Transcription, Transcription regulation, Cyclic nucleotide-binding domain, transcription regulator ; _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.entry_id 3E97 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;AUTHORS STATE THAT CRYSTAL PACKING ANALYSIS SUGGESTS A DIMER AS THE OLIGOMERIC FORM IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 4 ? ARG A 10 ? ARG A 3 ARG A 9 1 ? 7 HELX_P HELX_P2 2 SER A 11 ? GLN A 15 ? SER A 10 GLN A 14 5 ? 5 HELX_P HELX_P3 3 PRO A 18 ? VAL A 28 ? PRO A 17 VAL A 27 1 ? 11 HELX_P HELX_P4 4 HIS A 108 ? HIS A 119 ? HIS A 107 HIS A 118 1 ? 12 HELX_P HELX_P5 5 HIS A 119 ? ASN A 147 ? HIS A 118 ASN A 146 1 ? 29 HELX_P HELX_P6 6 ASN A 147 ? GLY A 167 ? ASN A 146 GLY A 166 1 ? 21 HELX_P HELX_P7 7 GLY A 177 ? SER A 186 ? GLY A 176 SER A 185 1 ? 10 HELX_P HELX_P8 8 SER A 188 ? HIS A 202 ? SER A 187 HIS A 201 1 ? 15 HELX_P HELX_P9 9 ASP A 216 ? LEU A 223 ? ASP A 215 LEU A 222 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 21 C ? ? ? 1_555 A MSE 22 N ? ? A ALA 20 A MSE 21 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MSE 22 C ? ? ? 1_555 A ARG 23 N ? ? A MSE 21 A ARG 22 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A LEU 105 C ? ? ? 1_555 A MSE 106 N ? ? A LEU 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? A MSE 106 C ? ? ? 1_555 A LEU 107 N ? ? A MSE 105 A LEU 106 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A GLU 128 C ? ? ? 1_555 A MSE 129 N ? ? A GLU 127 A MSE 128 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? A MSE 129 C ? ? ? 1_555 A LEU 130 N ? ? A MSE 128 A LEU 129 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? A ILE 181 C ? ? ? 1_555 A MSE 182 N ? ? A ILE 180 A MSE 181 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? A MSE 182 C ? ? ? 1_555 A ALA 183 N ? ? A MSE 181 A ALA 182 1_555 ? ? ? ? ? ? ? 1.332 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 77 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 76 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 78 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 77 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.50 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 30 ? PHE A 34 ? THR A 29 PHE A 33 A 2 VAL A 102 ? LEU A 107 ? VAL A 101 LEU A 106 A 3 LEU A 50 ? VAL A 53 ? LEU A 49 VAL A 52 A 4 GLY A 79 ? VAL A 81 ? GLY A 78 VAL A 80 B 1 GLU A 69 ? TYR A 76 ? GLU A 68 TYR A 75 B 2 VAL A 57 ? VAL A 63 ? VAL A 56 VAL A 62 B 3 ALA A 94 ? ALA A 98 ? ALA A 93 ALA A 97 C 1 VAL A 173 ? LEU A 174 ? VAL A 172 LEU A 173 C 2 VAL A 212 ? LEU A 214 ? VAL A 211 LEU A 213 C 3 LEU A 205 ? VAL A 207 ? LEU A 204 VAL A 206 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 32 ? N ARG A 31 O THR A 104 ? O THR A 103 A 2 3 O LEU A 107 ? O LEU A 106 N LEU A 50 ? N LEU A 49 A 3 4 N HIS A 51 ? N HIS A 50 O VAL A 81 ? O VAL A 80 B 1 2 O GLY A 73 ? O GLY A 72 N VAL A 60 ? N VAL A 59 B 2 3 N SER A 61 ? N SER A 60 O SER A 95 ? O SER A 94 C 1 2 N LEU A 174 ? N LEU A 173 O VAL A 212 ? O VAL A 211 C 2 3 O THR A 213 ? O THR A 212 N GLU A 206 ? N GLU A 205 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 231 ? 6 'BINDING SITE FOR RESIDUE EDO A 231' AC2 Software A EDO 232 ? 4 'BINDING SITE FOR RESIDUE EDO A 232' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 TYR A 160 ? TYR A 159 . ? 1_555 ? 2 AC1 6 LEU A 214 ? LEU A 213 . ? 1_555 ? 3 AC1 6 LEU A 215 ? LEU A 214 . ? 1_555 ? 4 AC1 6 ASP A 216 ? ASP A 215 . ? 1_555 ? 5 AC1 6 LEU A 217 ? LEU A 216 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 406 . ? 1_555 ? 7 AC2 4 HIS A 202 ? HIS A 201 . ? 1_555 ? 8 AC2 4 ASP A 216 ? ASP A 215 . ? 1_555 ? 9 AC2 4 HOH D . ? HOH A 331 . ? 1_555 ? 10 AC2 4 HOH D . ? HOH A 416 . ? 1_555 ? # _atom_sites.entry_id 3E97 _atom_sites.fract_transf_matrix[1][1] 0.014706 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014706 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008973 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 VAL 2 1 1 VAL VAL A . n A 1 3 GLY 3 2 2 GLY GLY A . n A 1 4 ARG 4 3 3 ARG ARG A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 ASP 6 5 5 ASP ASP A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 ARG 10 9 9 ARG ARG A . n A 1 11 SER 11 10 10 SER SER A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 PHE 14 13 13 PHE PHE A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 ASN 16 15 15 ASN ASN A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 GLU 19 18 18 GLU GLU A . n A 1 20 ASP 20 19 19 ASP ASP A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 MSE 22 21 21 MSE MSE A . n A 1 23 ARG 23 22 22 ARG ARG A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 PHE 34 33 33 PHE PHE A . n A 1 35 GLN 35 34 34 GLN GLN A . n A 1 36 PRO 36 35 35 PRO PRO A . n A 1 37 ASP 37 36 36 ASP ASP A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 GLU 42 41 41 GLU GLU A . n A 1 43 GLN 43 42 42 GLN GLN A . n A 1 44 ASP 44 43 43 ASP ASP A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 GLU 46 45 45 GLU GLU A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 ALA 49 48 48 ALA ALA A . n A 1 50 LEU 50 49 49 LEU LEU A . n A 1 51 HIS 51 50 50 HIS HIS A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 THR 54 53 53 THR THR A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 VAL 57 56 56 VAL VAL A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 ARG 59 58 58 ARG ARG A . n A 1 60 VAL 60 59 59 VAL VAL A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 ARG 62 61 61 ARG ARG A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 GLY 66 65 ? ? ? A . n A 1 67 GLY 67 66 ? ? ? A . n A 1 68 ARG 68 67 67 ARG ARG A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 ILE 75 74 74 ILE ILE A . n A 1 76 TYR 76 75 75 TYR TYR A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 PRO 78 77 77 PRO PRO A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 VAL 80 79 79 VAL VAL A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 GLU 83 82 82 GLU GLU A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 HIS 89 88 88 HIS HIS A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 ARG 92 91 91 ARG ARG A . n A 1 93 SER 93 92 92 SER SER A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 VAL 96 95 95 VAL VAL A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 THR 100 99 99 THR THR A . n A 1 101 PRO 101 100 100 PRO PRO A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 THR 104 103 103 THR THR A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 MSE 106 105 105 MSE MSE A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 HIS 108 107 107 HIS HIS A . n A 1 109 ARG 109 108 108 ARG ARG A . n A 1 110 GLU 110 109 109 GLU GLU A . n A 1 111 HIS 111 110 110 HIS HIS A . n A 1 112 PHE 112 111 111 PHE PHE A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 ILE 115 114 114 ILE ILE A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 ARG 117 116 116 ARG ARG A . n A 1 118 ARG 118 117 117 ARG ARG A . n A 1 119 HIS 119 118 118 HIS HIS A . n A 1 120 PRO 120 119 119 PRO PRO A . n A 1 121 ARG 121 120 120 ARG ARG A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 TRP 124 123 123 TRP TRP A . n A 1 125 ASN 125 124 124 ASN ASN A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 GLU 128 127 127 GLU GLU A . n A 1 129 MSE 129 128 128 MSE MSE A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 ARG 133 132 132 ARG ARG A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 THR 135 134 134 THR THR A . n A 1 136 PHE 136 135 135 PHE PHE A . n A 1 137 LEU 137 136 136 LEU LEU A . n A 1 138 ASN 138 137 137 ASN ASN A . n A 1 139 ASP 139 138 138 ASP ASP A . n A 1 140 GLU 140 139 139 GLU GLU A . n A 1 141 LEU 141 140 140 LEU LEU A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 PHE 144 143 143 PHE PHE A . n A 1 145 GLY 145 144 144 GLY GLY A . n A 1 146 GLN 146 145 145 GLN GLN A . n A 1 147 ASN 147 146 146 ASN ASN A . n A 1 148 THR 148 147 147 THR THR A . n A 1 149 GLU 149 148 148 GLU GLU A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 ALA 151 150 150 ALA ALA A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 HIS 154 153 153 HIS HIS A . n A 1 155 VAL 155 154 154 VAL VAL A . n A 1 156 PHE 156 155 155 PHE PHE A . n A 1 157 ALA 157 156 156 ALA ALA A . n A 1 158 ASN 158 157 157 ASN ASN A . n A 1 159 LEU 159 158 158 LEU LEU A . n A 1 160 TYR 160 159 159 TYR TYR A . n A 1 161 ARG 161 160 160 ARG ARG A . n A 1 162 GLN 162 161 161 GLN GLN A . n A 1 163 ARG 163 162 162 ARG ARG A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 ALA 165 164 164 ALA ALA A . n A 1 166 ALA 166 165 165 ALA ALA A . n A 1 167 GLY 167 166 166 GLY GLY A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 PRO 169 168 168 PRO PRO A . n A 1 170 GLN 170 169 169 GLN GLN A . n A 1 171 PRO 171 170 170 PRO PRO A . n A 1 172 GLU 172 171 171 GLU GLU A . n A 1 173 VAL 173 172 172 VAL VAL A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 PRO 175 174 174 PRO PRO A . n A 1 176 LEU 176 175 175 LEU LEU A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 THR 178 177 177 THR THR A . n A 1 179 GLN 179 178 178 GLN GLN A . n A 1 180 ASP 180 179 179 ASP ASP A . n A 1 181 ILE 181 180 180 ILE ILE A . n A 1 182 MSE 182 181 181 MSE MSE A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 ARG 184 183 183 ARG ARG A . n A 1 185 THR 185 184 184 THR THR A . n A 1 186 SER 186 185 185 SER SER A . n A 1 187 SER 187 186 186 SER SER A . n A 1 188 SER 188 187 187 SER SER A . n A 1 189 ARG 189 188 188 ARG ARG A . n A 1 190 GLU 190 189 189 GLU GLU A . n A 1 191 THR 191 190 190 THR THR A . n A 1 192 VAL 192 191 191 VAL VAL A . n A 1 193 SER 193 192 192 SER SER A . n A 1 194 ARG 194 193 193 ARG ARG A . n A 1 195 VAL 195 194 194 VAL VAL A . n A 1 196 LEU 196 195 195 LEU LEU A . n A 1 197 LYS 197 196 196 LYS LYS A . n A 1 198 ARG 198 197 197 ARG ARG A . n A 1 199 LEU 199 198 198 LEU LEU A . n A 1 200 GLU 200 199 199 GLU GLU A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 HIS 202 201 201 HIS HIS A . n A 1 203 ASN 203 202 202 ASN ASN A . n A 1 204 ILE 204 203 203 ILE ILE A . n A 1 205 LEU 205 204 204 LEU LEU A . n A 1 206 GLU 206 205 205 GLU GLU A . n A 1 207 VAL 207 206 206 VAL VAL A . n A 1 208 SER 208 207 207 SER SER A . n A 1 209 PRO 209 208 208 PRO PRO A . n A 1 210 ARG 210 209 209 ARG ARG A . n A 1 211 SER 211 210 210 SER SER A . n A 1 212 VAL 212 211 211 VAL VAL A . n A 1 213 THR 213 212 212 THR THR A . n A 1 214 LEU 214 213 213 LEU LEU A . n A 1 215 LEU 215 214 214 LEU LEU A . n A 1 216 ASP 216 215 215 ASP ASP A . n A 1 217 LEU 217 216 216 LEU LEU A . n A 1 218 ALA 218 217 217 ALA ALA A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 LEU 220 219 219 LEU LEU A . n A 1 221 GLU 221 220 220 GLU GLU A . n A 1 222 ALA 222 221 221 ALA ALA A . n A 1 223 LEU 223 222 222 LEU LEU A . n A 1 224 SER 224 223 223 SER SER A . n A 1 225 PHE 225 224 ? ? ? A . n A 1 226 GLU 226 225 ? ? ? A . n A 1 227 GLY 227 226 ? ? ? A . n A 1 228 ALA 228 227 ? ? ? A . n A 1 229 GLU 229 228 ? ? ? A . n A 1 230 THR 230 229 ? ? ? A . n A 1 231 ASP 231 230 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 231 1 EDO EDO A . C 2 EDO 1 232 2 EDO EDO A . D 3 HOH 1 233 3 HOH HOH A . D 3 HOH 2 234 4 HOH HOH A . D 3 HOH 3 235 5 HOH HOH A . D 3 HOH 4 236 6 HOH HOH A . D 3 HOH 5 237 7 HOH HOH A . D 3 HOH 6 238 8 HOH HOH A . D 3 HOH 7 239 9 HOH HOH A . D 3 HOH 8 240 10 HOH HOH A . D 3 HOH 9 241 11 HOH HOH A . D 3 HOH 10 242 12 HOH HOH A . D 3 HOH 11 243 13 HOH HOH A . D 3 HOH 12 244 14 HOH HOH A . D 3 HOH 13 245 15 HOH HOH A . D 3 HOH 14 246 16 HOH HOH A . D 3 HOH 15 247 17 HOH HOH A . D 3 HOH 16 248 18 HOH HOH A . D 3 HOH 17 249 19 HOH HOH A . D 3 HOH 18 250 20 HOH HOH A . D 3 HOH 19 251 21 HOH HOH A . D 3 HOH 20 252 22 HOH HOH A . D 3 HOH 21 253 23 HOH HOH A . D 3 HOH 22 254 24 HOH HOH A . D 3 HOH 23 255 25 HOH HOH A . D 3 HOH 24 256 26 HOH HOH A . D 3 HOH 25 257 27 HOH HOH A . D 3 HOH 26 258 28 HOH HOH A . D 3 HOH 27 259 29 HOH HOH A . D 3 HOH 28 260 30 HOH HOH A . D 3 HOH 29 261 31 HOH HOH A . D 3 HOH 30 262 32 HOH HOH A . D 3 HOH 31 263 33 HOH HOH A . D 3 HOH 32 264 34 HOH HOH A . D 3 HOH 33 265 35 HOH HOH A . D 3 HOH 34 266 36 HOH HOH A . D 3 HOH 35 267 37 HOH HOH A . D 3 HOH 36 268 38 HOH HOH A . D 3 HOH 37 269 39 HOH HOH A . D 3 HOH 38 270 40 HOH HOH A . D 3 HOH 39 271 41 HOH HOH A . D 3 HOH 40 272 42 HOH HOH A . D 3 HOH 41 273 43 HOH HOH A . D 3 HOH 42 274 44 HOH HOH A . D 3 HOH 43 275 45 HOH HOH A . D 3 HOH 44 276 46 HOH HOH A . D 3 HOH 45 277 47 HOH HOH A . D 3 HOH 46 278 48 HOH HOH A . D 3 HOH 47 279 49 HOH HOH A . D 3 HOH 48 280 50 HOH HOH A . D 3 HOH 49 281 51 HOH HOH A . D 3 HOH 50 282 52 HOH HOH A . D 3 HOH 51 283 53 HOH HOH A . D 3 HOH 52 284 54 HOH HOH A . D 3 HOH 53 285 55 HOH HOH A . D 3 HOH 54 286 56 HOH HOH A . D 3 HOH 55 287 57 HOH HOH A . D 3 HOH 56 288 58 HOH HOH A . D 3 HOH 57 289 59 HOH HOH A . D 3 HOH 58 290 60 HOH HOH A . D 3 HOH 59 291 61 HOH HOH A . D 3 HOH 60 292 62 HOH HOH A . D 3 HOH 61 293 63 HOH HOH A . D 3 HOH 62 294 64 HOH HOH A . D 3 HOH 63 295 65 HOH HOH A . D 3 HOH 64 296 66 HOH HOH A . D 3 HOH 65 297 67 HOH HOH A . D 3 HOH 66 298 68 HOH HOH A . D 3 HOH 67 299 69 HOH HOH A . D 3 HOH 68 300 70 HOH HOH A . D 3 HOH 69 301 71 HOH HOH A . D 3 HOH 70 302 72 HOH HOH A . D 3 HOH 71 303 73 HOH HOH A . D 3 HOH 72 304 74 HOH HOH A . D 3 HOH 73 305 75 HOH HOH A . D 3 HOH 74 306 76 HOH HOH A . D 3 HOH 75 307 77 HOH HOH A . D 3 HOH 76 308 78 HOH HOH A . D 3 HOH 77 309 79 HOH HOH A . D 3 HOH 78 310 80 HOH HOH A . D 3 HOH 79 311 81 HOH HOH A . D 3 HOH 80 312 82 HOH HOH A . D 3 HOH 81 313 83 HOH HOH A . D 3 HOH 82 314 84 HOH HOH A . D 3 HOH 83 315 85 HOH HOH A . D 3 HOH 84 316 86 HOH HOH A . D 3 HOH 85 317 87 HOH HOH A . D 3 HOH 86 318 88 HOH HOH A . D 3 HOH 87 319 89 HOH HOH A . D 3 HOH 88 320 90 HOH HOH A . D 3 HOH 89 321 91 HOH HOH A . D 3 HOH 90 322 92 HOH HOH A . D 3 HOH 91 323 93 HOH HOH A . D 3 HOH 92 324 94 HOH HOH A . D 3 HOH 93 325 95 HOH HOH A . D 3 HOH 94 326 96 HOH HOH A . D 3 HOH 95 327 97 HOH HOH A . D 3 HOH 96 328 98 HOH HOH A . D 3 HOH 97 329 99 HOH HOH A . D 3 HOH 98 330 100 HOH HOH A . D 3 HOH 99 331 101 HOH HOH A . D 3 HOH 100 332 102 HOH HOH A . D 3 HOH 101 333 103 HOH HOH A . D 3 HOH 102 334 104 HOH HOH A . D 3 HOH 103 335 105 HOH HOH A . D 3 HOH 104 336 106 HOH HOH A . D 3 HOH 105 337 107 HOH HOH A . D 3 HOH 106 338 108 HOH HOH A . D 3 HOH 107 339 109 HOH HOH A . D 3 HOH 108 340 110 HOH HOH A . D 3 HOH 109 341 111 HOH HOH A . D 3 HOH 110 342 112 HOH HOH A . D 3 HOH 111 343 113 HOH HOH A . D 3 HOH 112 344 114 HOH HOH A . D 3 HOH 113 345 115 HOH HOH A . D 3 HOH 114 346 116 HOH HOH A . D 3 HOH 115 347 117 HOH HOH A . D 3 HOH 116 348 118 HOH HOH A . D 3 HOH 117 349 119 HOH HOH A . D 3 HOH 118 350 120 HOH HOH A . D 3 HOH 119 351 121 HOH HOH A . D 3 HOH 120 352 122 HOH HOH A . D 3 HOH 121 353 123 HOH HOH A . D 3 HOH 122 354 124 HOH HOH A . D 3 HOH 123 355 125 HOH HOH A . D 3 HOH 124 356 126 HOH HOH A . D 3 HOH 125 357 127 HOH HOH A . D 3 HOH 126 358 128 HOH HOH A . D 3 HOH 127 359 129 HOH HOH A . D 3 HOH 128 360 130 HOH HOH A . D 3 HOH 129 361 131 HOH HOH A . D 3 HOH 130 362 132 HOH HOH A . D 3 HOH 131 363 133 HOH HOH A . D 3 HOH 132 364 134 HOH HOH A . D 3 HOH 133 365 135 HOH HOH A . D 3 HOH 134 366 136 HOH HOH A . D 3 HOH 135 367 137 HOH HOH A . D 3 HOH 136 368 138 HOH HOH A . D 3 HOH 137 369 139 HOH HOH A . D 3 HOH 138 370 140 HOH HOH A . D 3 HOH 139 371 141 HOH HOH A . D 3 HOH 140 372 142 HOH HOH A . D 3 HOH 141 373 143 HOH HOH A . D 3 HOH 142 374 144 HOH HOH A . D 3 HOH 143 375 145 HOH HOH A . D 3 HOH 144 376 146 HOH HOH A . D 3 HOH 145 377 147 HOH HOH A . D 3 HOH 146 378 148 HOH HOH A . D 3 HOH 147 379 149 HOH HOH A . D 3 HOH 148 380 150 HOH HOH A . D 3 HOH 149 381 151 HOH HOH A . D 3 HOH 150 382 152 HOH HOH A . D 3 HOH 151 383 153 HOH HOH A . D 3 HOH 152 384 154 HOH HOH A . D 3 HOH 153 385 155 HOH HOH A . D 3 HOH 154 386 156 HOH HOH A . D 3 HOH 155 387 157 HOH HOH A . D 3 HOH 156 388 158 HOH HOH A . D 3 HOH 157 389 159 HOH HOH A . D 3 HOH 158 390 160 HOH HOH A . D 3 HOH 159 391 161 HOH HOH A . D 3 HOH 160 392 162 HOH HOH A . D 3 HOH 161 393 163 HOH HOH A . D 3 HOH 162 394 164 HOH HOH A . D 3 HOH 163 395 165 HOH HOH A . D 3 HOH 164 396 166 HOH HOH A . D 3 HOH 165 397 167 HOH HOH A . D 3 HOH 166 398 168 HOH HOH A . D 3 HOH 167 399 169 HOH HOH A . D 3 HOH 168 400 170 HOH HOH A . D 3 HOH 169 401 171 HOH HOH A . D 3 HOH 170 402 172 HOH HOH A . D 3 HOH 171 403 173 HOH HOH A . D 3 HOH 172 404 174 HOH HOH A . D 3 HOH 173 405 175 HOH HOH A . D 3 HOH 174 406 176 HOH HOH A . D 3 HOH 175 407 177 HOH HOH A . D 3 HOH 176 408 178 HOH HOH A . D 3 HOH 177 409 179 HOH HOH A . D 3 HOH 178 410 180 HOH HOH A . D 3 HOH 179 411 181 HOH HOH A . D 3 HOH 180 412 182 HOH HOH A . D 3 HOH 181 413 183 HOH HOH A . D 3 HOH 182 414 184 HOH HOH A . D 3 HOH 183 415 185 HOH HOH A . D 3 HOH 184 416 186 HOH HOH A . D 3 HOH 185 417 187 HOH HOH A . D 3 HOH 186 418 188 HOH HOH A . D 3 HOH 187 419 189 HOH HOH A . D 3 HOH 188 420 190 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 22 A MSE 21 ? MET SELENOMETHIONINE 2 A MSE 106 A MSE 105 ? MET SELENOMETHIONINE 3 A MSE 129 A MSE 128 ? MET SELENOMETHIONINE 4 A MSE 182 A MSE 181 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4120 ? 1 MORE -14 ? 1 'SSA (A^2)' 20620 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3E97 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 181 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 181 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.547 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.403 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 36 ? ? 79.09 -2.30 2 1 ALA A 44 ? ? -141.42 43.46 3 1 SER A 92 ? ? -67.45 77.84 4 1 GLN A 145 ? ? -77.54 -75.49 5 1 GLN A 169 ? ? 38.73 60.75 6 1 GLN A 169 ? ? 39.64 59.84 7 1 LEU A 222 ? ? -62.73 78.12 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 8 ? CD ? A LYS 9 CD 2 1 Y 1 A LYS 8 ? CE ? A LYS 9 CE 3 1 Y 1 A LYS 8 ? NZ ? A LYS 9 NZ 4 1 Y 1 A ARG 9 ? NE ? A ARG 10 NE 5 1 Y 1 A ARG 9 ? CZ ? A ARG 10 CZ 6 1 Y 1 A ARG 9 ? NH1 ? A ARG 10 NH1 7 1 Y 1 A ARG 9 ? NH2 ? A ARG 10 NH2 8 1 Y 1 A LYS 26 ? CD ? A LYS 27 CD 9 1 Y 1 A LYS 26 ? CE ? A LYS 27 CE 10 1 Y 1 A LYS 26 ? NZ ? A LYS 27 NZ 11 1 Y 1 A ARG 67 ? CZ ? A ARG 68 CZ 12 1 Y 1 A ARG 67 ? NH1 ? A ARG 68 NH1 13 1 Y 1 A ARG 67 ? NH2 ? A ARG 68 NH2 14 1 Y 1 A HIS 88 ? CG ? A HIS 89 CG 15 1 Y 1 A HIS 88 ? ND1 ? A HIS 89 ND1 16 1 Y 1 A HIS 88 ? CD2 ? A HIS 89 CD2 17 1 Y 1 A HIS 88 ? CE1 ? A HIS 89 CE1 18 1 Y 1 A HIS 88 ? NE2 ? A HIS 89 NE2 19 1 Y 1 A SER 92 ? CB ? A SER 93 CB 20 1 Y 1 A SER 92 ? OG ? A SER 93 OG 21 1 Y 1 A ARG 108 ? NE ? A ARG 109 NE 22 1 Y 1 A ARG 108 ? CZ ? A ARG 109 CZ 23 1 Y 1 A ARG 108 ? NH1 ? A ARG 109 NH1 24 1 Y 1 A ARG 108 ? NH2 ? A ARG 109 NH2 25 1 Y 1 A ARG 120 ? NE ? A ARG 121 NE 26 1 Y 1 A ARG 120 ? CZ ? A ARG 121 CZ 27 1 Y 1 A ARG 120 ? NH1 ? A ARG 121 NH1 28 1 Y 1 A ARG 120 ? NH2 ? A ARG 121 NH2 29 1 Y 1 A GLU 189 ? CD ? A GLU 190 CD 30 1 Y 1 A GLU 189 ? OE1 ? A GLU 190 OE1 31 1 Y 1 A GLU 189 ? OE2 ? A GLU 190 OE2 32 1 Y 1 A ARG 209 ? CD ? A ARG 210 CD 33 1 Y 1 A ARG 209 ? NE ? A ARG 210 NE 34 1 Y 1 A ARG 209 ? CZ ? A ARG 210 CZ 35 1 Y 1 A ARG 209 ? NH1 ? A ARG 210 NH1 36 1 Y 1 A ARG 209 ? NH2 ? A ARG 210 NH2 37 1 Y 1 A SER 223 ? CB ? A SER 224 CB 38 1 Y 1 A SER 223 ? OG ? A SER 224 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 65 ? A GLY 66 2 1 Y 1 A GLY 66 ? A GLY 67 3 1 Y 1 A PHE 224 ? A PHE 225 4 1 Y 1 A GLU 225 ? A GLU 226 5 1 Y 1 A GLY 226 ? A GLY 227 6 1 Y 1 A ALA 227 ? A ALA 228 7 1 Y 1 A GLU 228 ? A GLU 229 8 1 Y 1 A THR 229 ? A THR 230 9 1 Y 1 A ASP 230 ? A ASP 231 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #