HEADER HYDROLASE 21-AUG-08 3E9E TITLE STRUCTURE OF FULL-LENGTH H11A MUTANT FORM OF TIGAR FROM DANIO RERIO COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZGC:56074; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: LEOPARD DANIO,ZEBRA DANIO,ZEBRA FISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: ZGC:56074; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS HISTIDINE PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.LI,G.JOGL REVDAT 4 20-OCT-21 3E9E 1 REMARK SEQADV REVDAT 3 25-OCT-17 3E9E 1 REMARK REVDAT 2 13-JUL-11 3E9E 1 VERSN REVDAT 1 16-DEC-08 3E9E 0 JRNL AUTH H.LI,G.JOGL JRNL TITL TIGAR (TP53 INDUCED GLYCOLYSIS AND APOPTOSIS REGULATOR) IS A JRNL TITL 2 FRUCTOSE-2,6- AND FRUCTOSE-1,6-BISPHOSPHATASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 42534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2151 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2887 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3743 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 330 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.28000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : 0.42000 REMARK 3 B12 (A**2) : -0.14000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.188 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3820 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5155 ; 1.248 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 476 ; 6.532 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 184 ;38.865 ;23.478 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 663 ;13.359 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;20.426 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 576 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2896 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2378 ; 0.742 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3817 ; 1.360 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1442 ; 2.087 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1338 ; 3.395 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 149 REMARK 3 RESIDUE RANGE : A 160 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): 91.7189 25.8821 -0.2847 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.0282 REMARK 3 T33: 0.0787 T12: -0.0377 REMARK 3 T13: -0.0458 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.2020 L22: 1.3920 REMARK 3 L33: 1.1141 L12: 0.4060 REMARK 3 L13: 0.5889 L23: 0.0596 REMARK 3 S TENSOR REMARK 3 S11: -0.1192 S12: -0.0092 S13: 0.0582 REMARK 3 S21: -0.1114 S22: -0.0517 S23: -0.0442 REMARK 3 S31: -0.1936 S32: -0.0225 S33: 0.1709 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 148 REMARK 3 RESIDUE RANGE : B 160 B 250 REMARK 3 ORIGIN FOR THE GROUP (A): 66.6451 8.5857 25.9225 REMARK 3 T TENSOR REMARK 3 T11: 0.0159 T22: 0.1254 REMARK 3 T33: 0.0623 T12: 0.0207 REMARK 3 T13: -0.0102 T23: -0.0576 REMARK 3 L TENSOR REMARK 3 L11: 2.1959 L22: 0.5285 REMARK 3 L33: 0.7250 L12: 0.2186 REMARK 3 L13: 0.2016 L23: 0.2192 REMARK 3 S TENSOR REMARK 3 S11: -0.1048 S12: -0.1301 S13: -0.0856 REMARK 3 S21: -0.0019 S22: 0.0284 S23: -0.0255 REMARK 3 S31: -0.0868 S32: -0.1173 S33: 0.0764 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3E9E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000049040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42544 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: COMO REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3% PEG 8000, 100 MM CALCIUM ACETATE, REMARK 280 100MM IMIDAZOLE, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.91667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.95833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.93750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 25.97917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 129.89583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 151 REMARK 465 SER A 152 REMARK 465 SER A 153 REMARK 465 VAL A 154 REMARK 465 PRO A 155 REMARK 465 SER A 156 REMARK 465 GLU A 157 REMARK 465 ALA A 158 REMARK 465 ASP A 159 REMARK 465 GLU A 251 REMARK 465 GLU A 252 REMARK 465 VAL A 253 REMARK 465 LYS A 254 REMARK 465 ASN A 255 REMARK 465 SER A 256 REMARK 465 ASP A 257 REMARK 465 LEU A 258 REMARK 465 GLU A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 MET B 1 REMARK 465 ALA B 150 REMARK 465 LEU B 151 REMARK 465 SER B 152 REMARK 465 SER B 153 REMARK 465 VAL B 154 REMARK 465 PRO B 155 REMARK 465 SER B 156 REMARK 465 GLU B 157 REMARK 465 ALA B 158 REMARK 465 ASP B 159 REMARK 465 GLU B 251 REMARK 465 GLU B 252 REMARK 465 VAL B 253 REMARK 465 LYS B 254 REMARK 465 ASN B 255 REMARK 465 SER B 256 REMARK 465 ASP B 257 REMARK 465 LEU B 258 REMARK 465 GLU B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLN B 160 O HOH B 507 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 11 152.87 -44.46 REMARK 500 SER A 182 -147.58 -145.97 REMARK 500 ALA A 204 84.66 18.05 REMARK 500 THR A 218 18.69 58.61 REMARK 500 GLU A 231 83.25 46.11 REMARK 500 SER A 232 -22.06 75.05 REMARK 500 VAL A 242 -58.22 -121.09 REMARK 500 SER B 182 -145.42 -152.95 REMARK 500 ALA B 204 61.92 29.54 REMARK 500 GLU B 231 82.97 -167.09 REMARK 500 SER B 232 -6.43 72.39 REMARK 500 LYS B 247 33.16 -142.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 1 LEU A 2 139.71 REMARK 500 PRO B 203 ALA B 204 148.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 266 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 266 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DCY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE A TP53-INDUCED GLYCOLYSIS AND APOPTOSIS REGULATOR REMARK 900 PROTEIN FROM HOMO SAPIENS. REMARK 900 RELATED ID: 3E9C RELATED DB: PDB REMARK 900 STRUCTURE OF A TRYPTIC CORE FRAGMENT OF TIGAR FROM DANIO RERIO REMARK 900 RELATED ID: 3E9D RELATED DB: PDB REMARK 900 STRUCTURE OF FULL-LENGTH TIGAR FROM DANIO RERIO DBREF 3E9E A 1 257 UNP Q7ZVE3 Q7ZVE3_DANRE 1 257 DBREF 3E9E B 1 257 UNP Q7ZVE3 Q7ZVE3_DANRE 1 257 SEQADV 3E9E ALA A 11 UNP Q7ZVE3 HIS 11 ENGINEERED MUTATION SEQADV 3E9E LEU A 258 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E GLU A 259 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS A 260 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS A 261 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS A 262 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS A 263 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS A 264 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS A 265 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E ALA B 11 UNP Q7ZVE3 HIS 11 ENGINEERED MUTATION SEQADV 3E9E LEU B 258 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E GLU B 259 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS B 260 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS B 261 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS B 262 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS B 263 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS B 264 UNP Q7ZVE3 EXPRESSION TAG SEQADV 3E9E HIS B 265 UNP Q7ZVE3 EXPRESSION TAG SEQRES 1 A 265 MET LEU THR PHE ALA LEU THR ILE VAL ARG ALA GLY GLU SEQRES 2 A 265 THR GLN TYR ASN ARG ASP LYS LEU LEU GLN GLY GLN GLY SEQRES 3 A 265 ILE ASP THR PRO LEU SER ASP THR GLY HIS GLN GLN ALA SEQRES 4 A 265 ALA ALA ALA GLY ARG TYR LEU LYS ASP LEU HIS PHE THR SEQRES 5 A 265 ASN VAL PHE VAL SER ASN LEU GLN ARG ALA ILE GLN THR SEQRES 6 A 265 ALA GLU ILE ILE LEU GLY ASN ASN LEU HIS SER SER ALA SEQRES 7 A 265 THR GLU MET ILE LEU ASP PRO LEU LEU ARG GLU ARG GLY SEQRES 8 A 265 PHE GLY VAL ALA GLU GLY ARG PRO LYS GLU HIS LEU LYS SEQRES 9 A 265 ASN MET ALA ASN ALA ALA GLY GLN SER CYS ARG ASP TYR SEQRES 10 A 265 THR PRO PRO GLY GLY GLU THR LEU GLU GLN VAL LYS THR SEQRES 11 A 265 ARG PHE LYS MET PHE LEU LYS SER LEU PHE GLN ARG MET SEQRES 12 A 265 PHE GLU GLU HIS GLY SER ALA LEU SER SER VAL PRO SER SEQRES 13 A 265 GLU ALA ASP GLN PRO VAL ILE ALA GLY LEU ALA ASP ASP SEQRES 14 A 265 GLY ALA GLN ASN VAL PRO VAL HIS ALA LEU MET VAL SER SEQRES 15 A 265 HIS GLY ALA PHE ILE ARG ILE SER VAL ARG HIS LEU VAL SEQRES 16 A 265 GLU ASP LEU GLN CYS CYS LEU PRO ALA GLY LEU LYS MET SEQRES 17 A 265 ASN GLN VAL PHE SER PRO CYS PRO ASN THR GLY ILE SER SEQRES 18 A 265 ARG PHE ILE PHE THR ILE HIS ARG GLU GLU SER VAL LEU SEQRES 19 A 265 ARG ALA THR ARG ILE GLN GLY VAL PHE ILE ASN ARG LYS SEQRES 20 A 265 ASP HIS LEU GLU GLU VAL LYS ASN SER ASP LEU GLU HIS SEQRES 21 A 265 HIS HIS HIS HIS HIS SEQRES 1 B 265 MET LEU THR PHE ALA LEU THR ILE VAL ARG ALA GLY GLU SEQRES 2 B 265 THR GLN TYR ASN ARG ASP LYS LEU LEU GLN GLY GLN GLY SEQRES 3 B 265 ILE ASP THR PRO LEU SER ASP THR GLY HIS GLN GLN ALA SEQRES 4 B 265 ALA ALA ALA GLY ARG TYR LEU LYS ASP LEU HIS PHE THR SEQRES 5 B 265 ASN VAL PHE VAL SER ASN LEU GLN ARG ALA ILE GLN THR SEQRES 6 B 265 ALA GLU ILE ILE LEU GLY ASN ASN LEU HIS SER SER ALA SEQRES 7 B 265 THR GLU MET ILE LEU ASP PRO LEU LEU ARG GLU ARG GLY SEQRES 8 B 265 PHE GLY VAL ALA GLU GLY ARG PRO LYS GLU HIS LEU LYS SEQRES 9 B 265 ASN MET ALA ASN ALA ALA GLY GLN SER CYS ARG ASP TYR SEQRES 10 B 265 THR PRO PRO GLY GLY GLU THR LEU GLU GLN VAL LYS THR SEQRES 11 B 265 ARG PHE LYS MET PHE LEU LYS SER LEU PHE GLN ARG MET SEQRES 12 B 265 PHE GLU GLU HIS GLY SER ALA LEU SER SER VAL PRO SER SEQRES 13 B 265 GLU ALA ASP GLN PRO VAL ILE ALA GLY LEU ALA ASP ASP SEQRES 14 B 265 GLY ALA GLN ASN VAL PRO VAL HIS ALA LEU MET VAL SER SEQRES 15 B 265 HIS GLY ALA PHE ILE ARG ILE SER VAL ARG HIS LEU VAL SEQRES 16 B 265 GLU ASP LEU GLN CYS CYS LEU PRO ALA GLY LEU LYS MET SEQRES 17 B 265 ASN GLN VAL PHE SER PRO CYS PRO ASN THR GLY ILE SER SEQRES 18 B 265 ARG PHE ILE PHE THR ILE HIS ARG GLU GLU SER VAL LEU SEQRES 19 B 265 ARG ALA THR ARG ILE GLN GLY VAL PHE ILE ASN ARG LYS SEQRES 20 B 265 ASP HIS LEU GLU GLU VAL LYS ASN SER ASP LEU GLU HIS SEQRES 21 B 265 HIS HIS HIS HIS HIS HET PO4 A 266 5 HET PO4 B 266 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *330(H2 O) HELIX 1 1 SER A 32 LEU A 46 1 15 HELIX 2 2 LEU A 59 ASN A 72 1 14 HELIX 3 3 PRO A 85 ARG A 88 5 4 HELIX 4 4 PHE A 92 GLU A 96 5 5 HELIX 5 5 PRO A 99 ALA A 110 1 12 HELIX 6 6 THR A 124 GLY A 148 1 25 HELIX 7 7 HIS A 183 ASP A 197 1 15 HELIX 8 8 LYS A 207 PHE A 212 1 6 HELIX 9 9 THR B 14 ASP B 19 1 6 HELIX 10 10 SER B 32 LEU B 46 1 15 HELIX 11 11 LEU B 59 ASN B 72 1 14 HELIX 12 12 PRO B 85 ARG B 88 5 4 HELIX 13 13 PHE B 92 GLU B 96 5 5 HELIX 14 14 PRO B 99 ALA B 110 1 12 HELIX 15 15 THR B 124 GLY B 148 1 25 HELIX 16 16 HIS B 183 ASP B 197 1 15 HELIX 17 17 LYS B 207 PHE B 212 1 6 SHEET 1 A 6 MET A 81 LEU A 83 0 SHEET 2 A 6 ASN A 53 VAL A 56 1 N VAL A 54 O ILE A 82 SHEET 3 A 6 HIS A 177 SER A 182 1 O LEU A 179 N PHE A 55 SHEET 4 A 6 THR A 3 ARG A 10 1 N ALA A 5 O ALA A 178 SHEET 5 A 6 ILE A 220 GLU A 230 -1 O PHE A 225 N PHE A 4 SHEET 6 A 6 VAL A 233 ARG A 246 -1 O VAL A 233 N GLU A 230 SHEET 1 B 6 MET B 81 LEU B 83 0 SHEET 2 B 6 ASN B 53 VAL B 56 1 N VAL B 54 O ILE B 82 SHEET 3 B 6 HIS B 177 SER B 182 1 O LEU B 179 N PHE B 55 SHEET 4 B 6 THR B 3 ARG B 10 1 N THR B 7 O MET B 180 SHEET 5 B 6 ILE B 220 ARG B 229 -1 O PHE B 223 N LEU B 6 SHEET 6 B 6 LEU B 234 ARG B 246 -1 O ARG B 246 N ILE B 220 SSBOND 1 CYS A 201 CYS B 201 1555 1555 2.08 SITE 1 AC1 8 ARG A 10 ARG A 61 GLU A 89 HIS A 183 SITE 2 AC1 8 GLY A 184 HOH A 304 HOH A 359 HOH A 393 SITE 1 AC2 9 ARG B 10 ASN B 17 GLN B 23 ARG B 61 SITE 2 AC2 9 GLU B 89 HIS B 183 GLY B 184 ASN B 217 SITE 3 AC2 9 HOH B 353 CRYST1 91.358 91.358 155.875 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010946 0.006320 0.000000 0.00000 SCALE2 0.000000 0.012639 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006415 0.00000