data_3EC2 # _entry.id 3EC2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3EC2 RCSB RCSB049135 WWPDB D_1000049135 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3ECC _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3EC2 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-08-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mott, M.L.' 1 'Erzberger, J.P.' 2 'Coons, M.M.' 3 'Berger, J.M.' 4 # _citation.id primary _citation.title 'Structural synergy and molecular crosstalk between bacterial helicase loaders and replication initiators.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 135 _citation.page_first 623 _citation.page_last 634 _citation.year 2008 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19013274 _citation.pdbx_database_id_DOI 10.1016/j.cell.2008.09.058 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Mott, M.L.' 1 primary 'Erzberger, J.P.' 2 primary 'Coons, M.M.' 3 primary 'Berger, J.M.' 4 # _cell.entry_id 3EC2 _cell.length_a 84.492 _cell.length_b 84.492 _cell.length_c 51.113 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EC2 _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA replication protein DnaC' 20812.529 1 ? ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 47 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;AKRYWNANLDTYHPKNVSQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIF RLKHL(MSE)DEGKDTKFLKTVLNSPVLVLDDLGSERLSDWQRELISYIITYRYNNLKSTIITTNYSLQREEESSVRISA DLASRLGENVVSKIYE(MSE)NELLVIK ; _entity_poly.pdbx_seq_one_letter_code_can ;AKRYWNANLDTYHPKNVSQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIF RLKHLMDEGKDTKFLKTVLNSPVLVLDDLGSERLSDWQRELISYIITYRYNNLKSTIITTNYSLQREEESSVRISADLAS RLGENVVSKIYEMNELLVIK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 ARG n 1 4 TYR n 1 5 TRP n 1 6 ASN n 1 7 ALA n 1 8 ASN n 1 9 LEU n 1 10 ASP n 1 11 THR n 1 12 TYR n 1 13 HIS n 1 14 PRO n 1 15 LYS n 1 16 ASN n 1 17 VAL n 1 18 SER n 1 19 GLN n 1 20 ASN n 1 21 ARG n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 THR n 1 26 ILE n 1 27 ARG n 1 28 VAL n 1 29 PHE n 1 30 VAL n 1 31 HIS n 1 32 ASN n 1 33 PHE n 1 34 ASN n 1 35 PRO n 1 36 GLU n 1 37 GLU n 1 38 GLY n 1 39 LYS n 1 40 GLY n 1 41 LEU n 1 42 THR n 1 43 PHE n 1 44 VAL n 1 45 GLY n 1 46 SER n 1 47 PRO n 1 48 GLY n 1 49 VAL n 1 50 GLY n 1 51 LYS n 1 52 THR n 1 53 HIS n 1 54 LEU n 1 55 ALA n 1 56 VAL n 1 57 ALA n 1 58 THR n 1 59 LEU n 1 60 LYS n 1 61 ALA n 1 62 ILE n 1 63 TYR n 1 64 GLU n 1 65 LYS n 1 66 LYS n 1 67 GLY n 1 68 ILE n 1 69 ARG n 1 70 GLY n 1 71 TYR n 1 72 PHE n 1 73 PHE n 1 74 ASP n 1 75 THR n 1 76 LYS n 1 77 ASP n 1 78 LEU n 1 79 ILE n 1 80 PHE n 1 81 ARG n 1 82 LEU n 1 83 LYS n 1 84 HIS n 1 85 LEU n 1 86 MSE n 1 87 ASP n 1 88 GLU n 1 89 GLY n 1 90 LYS n 1 91 ASP n 1 92 THR n 1 93 LYS n 1 94 PHE n 1 95 LEU n 1 96 LYS n 1 97 THR n 1 98 VAL n 1 99 LEU n 1 100 ASN n 1 101 SER n 1 102 PRO n 1 103 VAL n 1 104 LEU n 1 105 VAL n 1 106 LEU n 1 107 ASP n 1 108 ASP n 1 109 LEU n 1 110 GLY n 1 111 SER n 1 112 GLU n 1 113 ARG n 1 114 LEU n 1 115 SER n 1 116 ASP n 1 117 TRP n 1 118 GLN n 1 119 ARG n 1 120 GLU n 1 121 LEU n 1 122 ILE n 1 123 SER n 1 124 TYR n 1 125 ILE n 1 126 ILE n 1 127 THR n 1 128 TYR n 1 129 ARG n 1 130 TYR n 1 131 ASN n 1 132 ASN n 1 133 LEU n 1 134 LYS n 1 135 SER n 1 136 THR n 1 137 ILE n 1 138 ILE n 1 139 THR n 1 140 THR n 1 141 ASN n 1 142 TYR n 1 143 SER n 1 144 LEU n 1 145 GLN n 1 146 ARG n 1 147 GLU n 1 148 GLU n 1 149 GLU n 1 150 SER n 1 151 SER n 1 152 VAL n 1 153 ARG n 1 154 ILE n 1 155 SER n 1 156 ALA n 1 157 ASP n 1 158 LEU n 1 159 ALA n 1 160 SER n 1 161 ARG n 1 162 LEU n 1 163 GLY n 1 164 GLU n 1 165 ASN n 1 166 VAL n 1 167 VAL n 1 168 SER n 1 169 LYS n 1 170 ILE n 1 171 TYR n 1 172 GLU n 1 173 MSE n 1 174 ASN n 1 175 GLU n 1 176 LEU n 1 177 LEU n 1 178 VAL n 1 179 ILE n 1 180 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dnaC, aq_910' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 63363 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O67056_AQUAE _struct_ref.pdbx_db_accession O67056 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KRYWNANLDTYHPKNVSQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFR LKHLMDEGKDTKFLKTVLNSPVLVLDDLGSERLSDWQRELISYIITYRYNNLKSTIITTNYSLQREEESSVRISADLASR LGENVVSKIYEMNELLVIK ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3EC2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O67056 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 221 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 43 _struct_ref_seq.pdbx_auth_seq_align_end 221 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3EC2 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O67056 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 42 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3EC2 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '50mM Tris, 1% PEG 6K, 1mM TCEP, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-06-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9795 1.0 2 1.11587 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9795, 1.11587' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 # _reflns.entry_id 3EC2 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.25 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 5534 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 39.424 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3EC2 _refine.ls_wR_factor_R_work 0.221 _refine.ls_wR_factor_R_free 0.282 _refine.B_iso_mean 67.597 _refine.overall_SU_R_free 0.408 _refine.pdbx_method_to_determine_struct ? _refine.overall_FOM_work_R_set 0.761 _refine.B_iso_max 111.26 _refine.B_iso_min 21.88 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.ls_d_res_high 2.7 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 5534 _refine.ls_number_reflns_obs 5534 _refine.ls_number_reflns_R_free 265 _refine.ls_percent_reflns_obs 100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.233 _refine.ls_R_factor_R_free 0.278 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1434 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 1509 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.985 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 3EC2 _struct.title 'Crystal structure of the DnaC helicase loader' _struct.pdbx_descriptor 'DNA replication protein DnaC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EC2 _struct_keywords.pdbx_keywords REPLICATION _struct_keywords.text 'helicase loader, replication initiation factor, ATP-binding, Nucleotide-binding, REPLICATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 16 ? ASN A 32 ? ASN A 57 ASN A 73 1 ? 17 HELX_P HELX_P2 2 ASN A 34 ? GLY A 38 ? ASN A 75 GLY A 79 5 ? 5 HELX_P HELX_P3 3 GLY A 50 ? LYS A 66 ? GLY A 91 LYS A 107 1 ? 17 HELX_P HELX_P4 4 THR A 75 ? GLY A 89 ? THR A 116 GLY A 130 1 ? 15 HELX_P HELX_P5 5 THR A 92 ? ASN A 100 ? THR A 133 ASN A 141 1 ? 9 HELX_P HELX_P6 6 SER A 115 ? ASN A 132 ? SER A 156 ASN A 173 1 ? 18 HELX_P HELX_P7 7 SER A 150 ? GLY A 163 ? SER A 191 GLY A 204 1 ? 14 HELX_P HELX_P8 8 GLY A 163 ? MSE A 173 ? GLY A 204 MSE A 214 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 85 C ? ? ? 1_555 A MSE 86 N ? ? A LEU 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 86 C ? ? ? 1_555 A ASP 87 N ? ? A MSE 127 A ASP 128 1_555 ? ? ? ? ? ? ? 1.314 ? covale3 covale ? ? A GLU 172 C ? ? ? 1_555 A MSE 173 N ? ? A GLU 213 A MSE 214 1_555 ? ? ? ? ? ? ? 1.313 ? covale4 covale ? ? A MSE 173 C ? ? ? 1_555 A ASN 174 N ? ? A MSE 214 A ASN 215 1_555 ? ? ? ? ? ? ? 1.316 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 72 ? ASP A 74 ? PHE A 113 ASP A 115 A 2 VAL A 103 ? ASP A 107 ? VAL A 144 ASP A 148 A 3 SER A 135 ? THR A 139 ? SER A 176 THR A 180 A 4 GLY A 40 ? PHE A 43 ? GLY A 81 PHE A 84 A 5 ASN A 174 ? LEU A 177 ? ASN A 215 LEU A 218 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 73 ? N PHE A 114 O ASP A 107 ? O ASP A 148 A 2 3 N LEU A 104 ? N LEU A 145 O ILE A 137 ? O ILE A 178 A 3 4 O ILE A 138 ? O ILE A 179 N PHE A 43 ? N PHE A 84 A 4 5 N THR A 42 ? N THR A 83 O LEU A 177 ? O LEU A 218 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE ADP A 222' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MG A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 HOH D . ? HOH A 7 . ? 1_555 ? 2 AC1 16 TYR A 4 ? TYR A 45 . ? 1_555 ? 3 AC1 16 THR A 11 ? THR A 52 . ? 1_555 ? 4 AC1 16 TYR A 12 ? TYR A 53 . ? 1_555 ? 5 AC1 16 HIS A 13 ? HIS A 54 . ? 1_555 ? 6 AC1 16 GLN A 19 ? GLN A 60 . ? 1_555 ? 7 AC1 16 GLY A 48 ? GLY A 89 . ? 1_555 ? 8 AC1 16 VAL A 49 ? VAL A 90 . ? 1_555 ? 9 AC1 16 GLY A 50 ? GLY A 91 . ? 1_555 ? 10 AC1 16 LYS A 51 ? LYS A 92 . ? 1_555 ? 11 AC1 16 THR A 52 ? THR A 93 . ? 1_555 ? 12 AC1 16 HIS A 53 ? HIS A 94 . ? 1_555 ? 13 AC1 16 TYR A 130 ? TYR A 171 . ? 5_554 ? 14 AC1 16 GLU A 172 ? GLU A 213 . ? 5_554 ? 15 AC1 16 HOH D . ? HOH A 229 . ? 1_555 ? 16 AC1 16 MG C . ? MG A 300 . ? 1_555 ? 17 AC2 3 THR A 52 ? THR A 93 . ? 1_555 ? 18 AC2 3 ASP A 107 ? ASP A 148 . ? 1_555 ? 19 AC2 3 ADP B . ? ADP A 222 . ? 1_555 ? # _atom_sites.entry_id 3EC2 _atom_sites.fract_transf_matrix[1][1] 0.011835 _atom_sites.fract_transf_matrix[1][2] 0.006833 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013666 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019564 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 42 42 ALA ALA A . n A 1 2 LYS 2 43 43 LYS LYS A . n A 1 3 ARG 3 44 44 ARG ARG A . n A 1 4 TYR 4 45 45 TYR TYR A . n A 1 5 TRP 5 46 46 TRP TRP A . n A 1 6 ASN 6 47 47 ASN ASN A . n A 1 7 ALA 7 48 48 ALA ALA A . n A 1 8 ASN 8 49 49 ASN ASN A . n A 1 9 LEU 9 50 50 LEU LEU A . n A 1 10 ASP 10 51 51 ASP ASP A . n A 1 11 THR 11 52 52 THR THR A . n A 1 12 TYR 12 53 53 TYR TYR A . n A 1 13 HIS 13 54 54 HIS HIS A . n A 1 14 PRO 14 55 55 PRO PRO A . n A 1 15 LYS 15 56 56 LYS LYS A . n A 1 16 ASN 16 57 57 ASN ASN A . n A 1 17 VAL 17 58 58 VAL VAL A . n A 1 18 SER 18 59 59 SER SER A . n A 1 19 GLN 19 60 60 GLN GLN A . n A 1 20 ASN 20 61 61 ASN ASN A . n A 1 21 ARG 21 62 62 ARG ARG A . n A 1 22 ALA 22 63 63 ALA ALA A . n A 1 23 LEU 23 64 64 LEU LEU A . n A 1 24 LEU 24 65 65 LEU LEU A . n A 1 25 THR 25 66 66 THR THR A . n A 1 26 ILE 26 67 67 ILE ILE A . n A 1 27 ARG 27 68 68 ARG ARG A . n A 1 28 VAL 28 69 69 VAL VAL A . n A 1 29 PHE 29 70 70 PHE PHE A . n A 1 30 VAL 30 71 71 VAL VAL A . n A 1 31 HIS 31 72 72 HIS HIS A . n A 1 32 ASN 32 73 73 ASN ASN A . n A 1 33 PHE 33 74 74 PHE PHE A . n A 1 34 ASN 34 75 75 ASN ASN A . n A 1 35 PRO 35 76 76 PRO PRO A . n A 1 36 GLU 36 77 77 GLU GLU A . n A 1 37 GLU 37 78 78 GLU GLU A . n A 1 38 GLY 38 79 79 GLY GLY A . n A 1 39 LYS 39 80 80 LYS LYS A . n A 1 40 GLY 40 81 81 GLY GLY A . n A 1 41 LEU 41 82 82 LEU LEU A . n A 1 42 THR 42 83 83 THR THR A . n A 1 43 PHE 43 84 84 PHE PHE A . n A 1 44 VAL 44 85 85 VAL VAL A . n A 1 45 GLY 45 86 86 GLY GLY A . n A 1 46 SER 46 87 87 SER SER A . n A 1 47 PRO 47 88 88 PRO PRO A . n A 1 48 GLY 48 89 89 GLY GLY A . n A 1 49 VAL 49 90 90 VAL VAL A . n A 1 50 GLY 50 91 91 GLY GLY A . n A 1 51 LYS 51 92 92 LYS LYS A . n A 1 52 THR 52 93 93 THR THR A . n A 1 53 HIS 53 94 94 HIS HIS A . n A 1 54 LEU 54 95 95 LEU LEU A . n A 1 55 ALA 55 96 96 ALA ALA A . n A 1 56 VAL 56 97 97 VAL VAL A . n A 1 57 ALA 57 98 98 ALA ALA A . n A 1 58 THR 58 99 99 THR THR A . n A 1 59 LEU 59 100 100 LEU LEU A . n A 1 60 LYS 60 101 101 LYS LYS A . n A 1 61 ALA 61 102 102 ALA ALA A . n A 1 62 ILE 62 103 103 ILE ILE A . n A 1 63 TYR 63 104 104 TYR TYR A . n A 1 64 GLU 64 105 105 GLU GLU A . n A 1 65 LYS 65 106 106 LYS LYS A . n A 1 66 LYS 66 107 107 LYS LYS A . n A 1 67 GLY 67 108 108 GLY GLY A . n A 1 68 ILE 68 109 109 ILE ILE A . n A 1 69 ARG 69 110 110 ARG ARG A . n A 1 70 GLY 70 111 111 GLY GLY A . n A 1 71 TYR 71 112 112 TYR TYR A . n A 1 72 PHE 72 113 113 PHE PHE A . n A 1 73 PHE 73 114 114 PHE PHE A . n A 1 74 ASP 74 115 115 ASP ASP A . n A 1 75 THR 75 116 116 THR THR A . n A 1 76 LYS 76 117 117 LYS LYS A . n A 1 77 ASP 77 118 118 ASP ASP A . n A 1 78 LEU 78 119 119 LEU LEU A . n A 1 79 ILE 79 120 120 ILE ILE A . n A 1 80 PHE 80 121 121 PHE PHE A . n A 1 81 ARG 81 122 122 ARG ARG A . n A 1 82 LEU 82 123 123 LEU LEU A . n A 1 83 LYS 83 124 124 LYS LYS A . n A 1 84 HIS 84 125 125 HIS HIS A . n A 1 85 LEU 85 126 126 LEU LEU A . n A 1 86 MSE 86 127 127 MSE MSE A . n A 1 87 ASP 87 128 128 ASP ASP A . n A 1 88 GLU 88 129 129 GLU GLU A . n A 1 89 GLY 89 130 130 GLY GLY A . n A 1 90 LYS 90 131 131 LYS LYS A . n A 1 91 ASP 91 132 132 ASP ASP A . n A 1 92 THR 92 133 133 THR THR A . n A 1 93 LYS 93 134 134 LYS LYS A . n A 1 94 PHE 94 135 135 PHE PHE A . n A 1 95 LEU 95 136 136 LEU LEU A . n A 1 96 LYS 96 137 137 LYS LYS A . n A 1 97 THR 97 138 138 THR THR A . n A 1 98 VAL 98 139 139 VAL VAL A . n A 1 99 LEU 99 140 140 LEU LEU A . n A 1 100 ASN 100 141 141 ASN ASN A . n A 1 101 SER 101 142 142 SER SER A . n A 1 102 PRO 102 143 143 PRO PRO A . n A 1 103 VAL 103 144 144 VAL VAL A . n A 1 104 LEU 104 145 145 LEU LEU A . n A 1 105 VAL 105 146 146 VAL VAL A . n A 1 106 LEU 106 147 147 LEU LEU A . n A 1 107 ASP 107 148 148 ASP ASP A . n A 1 108 ASP 108 149 149 ASP ASP A . n A 1 109 LEU 109 150 150 LEU LEU A . n A 1 110 GLY 110 151 151 GLY GLY A . n A 1 111 SER 111 152 152 SER SER A . n A 1 112 GLU 112 153 153 GLU GLU A . n A 1 113 ARG 113 154 154 ARG ARG A . n A 1 114 LEU 114 155 155 LEU LEU A . n A 1 115 SER 115 156 156 SER SER A . n A 1 116 ASP 116 157 157 ASP ASP A . n A 1 117 TRP 117 158 158 TRP TRP A . n A 1 118 GLN 118 159 159 GLN GLN A . n A 1 119 ARG 119 160 160 ARG ARG A . n A 1 120 GLU 120 161 161 GLU GLU A . n A 1 121 LEU 121 162 162 LEU LEU A . n A 1 122 ILE 122 163 163 ILE ILE A . n A 1 123 SER 123 164 164 SER SER A . n A 1 124 TYR 124 165 165 TYR TYR A . n A 1 125 ILE 125 166 166 ILE ILE A . n A 1 126 ILE 126 167 167 ILE ILE A . n A 1 127 THR 127 168 168 THR THR A . n A 1 128 TYR 128 169 169 TYR TYR A . n A 1 129 ARG 129 170 170 ARG ARG A . n A 1 130 TYR 130 171 171 TYR TYR A . n A 1 131 ASN 131 172 172 ASN ASN A . n A 1 132 ASN 132 173 173 ASN ASN A . n A 1 133 LEU 133 174 174 LEU LEU A . n A 1 134 LYS 134 175 175 LYS LYS A . n A 1 135 SER 135 176 176 SER SER A . n A 1 136 THR 136 177 177 THR THR A . n A 1 137 ILE 137 178 178 ILE ILE A . n A 1 138 ILE 138 179 179 ILE ILE A . n A 1 139 THR 139 180 180 THR THR A . n A 1 140 THR 140 181 181 THR THR A . n A 1 141 ASN 141 182 182 ASN ASN A . n A 1 142 TYR 142 183 183 TYR TYR A . n A 1 143 SER 143 184 184 SER SER A . n A 1 144 LEU 144 185 185 LEU LEU A . n A 1 145 GLN 145 186 186 GLN GLN A . n A 1 146 ARG 146 187 187 ARG ARG A . n A 1 147 GLU 147 188 ? ? ? A . n A 1 148 GLU 148 189 ? ? ? A . n A 1 149 GLU 149 190 ? ? ? A . n A 1 150 SER 150 191 191 SER SER A . n A 1 151 SER 151 192 192 SER SER A . n A 1 152 VAL 152 193 193 VAL VAL A . n A 1 153 ARG 153 194 194 ARG ARG A . n A 1 154 ILE 154 195 195 ILE ILE A . n A 1 155 SER 155 196 196 SER SER A . n A 1 156 ALA 156 197 197 ALA ALA A . n A 1 157 ASP 157 198 198 ASP ASP A . n A 1 158 LEU 158 199 199 LEU LEU A . n A 1 159 ALA 159 200 200 ALA ALA A . n A 1 160 SER 160 201 201 SER SER A . n A 1 161 ARG 161 202 202 ARG ARG A . n A 1 162 LEU 162 203 203 LEU LEU A . n A 1 163 GLY 163 204 204 GLY GLY A . n A 1 164 GLU 164 205 205 GLU GLU A . n A 1 165 ASN 165 206 206 ASN ASN A . n A 1 166 VAL 166 207 207 VAL VAL A . n A 1 167 VAL 167 208 208 VAL VAL A . n A 1 168 SER 168 209 209 SER SER A . n A 1 169 LYS 169 210 210 LYS LYS A . n A 1 170 ILE 170 211 211 ILE ILE A . n A 1 171 TYR 171 212 212 TYR TYR A . n A 1 172 GLU 172 213 213 GLU GLU A . n A 1 173 MSE 173 214 214 MSE MSE A . n A 1 174 ASN 174 215 215 ASN ASN A . n A 1 175 GLU 175 216 216 GLU GLU A . n A 1 176 LEU 176 217 217 LEU LEU A . n A 1 177 LEU 177 218 218 LEU LEU A . n A 1 178 VAL 178 219 219 VAL VAL A . n A 1 179 ILE 179 220 220 ILE ILE A . n A 1 180 LYS 180 221 221 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 222 222 ADP ADP A . C 3 MG 1 300 300 MG MG A . D 4 HOH 1 2 2 HOH WAT A . D 4 HOH 2 3 3 HOH WAT A . D 4 HOH 3 4 4 HOH WAT A . D 4 HOH 4 5 5 HOH WAT A . D 4 HOH 5 6 6 HOH WAT A . D 4 HOH 6 7 7 HOH WAT A . D 4 HOH 7 8 8 HOH WAT A . D 4 HOH 8 9 9 HOH WAT A . D 4 HOH 9 10 10 HOH WAT A . D 4 HOH 10 11 11 HOH WAT A . D 4 HOH 11 12 12 HOH WAT A . D 4 HOH 12 13 13 HOH WAT A . D 4 HOH 13 14 14 HOH WAT A . D 4 HOH 14 15 15 HOH WAT A . D 4 HOH 15 16 16 HOH WAT A . D 4 HOH 16 17 17 HOH WAT A . D 4 HOH 17 18 18 HOH WAT A . D 4 HOH 18 19 19 HOH WAT A . D 4 HOH 19 20 20 HOH WAT A . D 4 HOH 20 21 21 HOH WAT A . D 4 HOH 21 22 22 HOH WAT A . D 4 HOH 22 23 23 HOH WAT A . D 4 HOH 23 24 24 HOH WAT A . D 4 HOH 24 25 25 HOH WAT A . D 4 HOH 25 26 26 HOH WAT A . D 4 HOH 26 27 27 HOH WAT A . D 4 HOH 27 28 28 HOH WAT A . D 4 HOH 28 29 29 HOH WAT A . D 4 HOH 29 30 30 HOH WAT A . D 4 HOH 30 31 31 HOH WAT A . D 4 HOH 31 32 32 HOH WAT A . D 4 HOH 32 33 33 HOH WAT A . D 4 HOH 33 34 34 HOH WAT A . D 4 HOH 34 35 35 HOH WAT A . D 4 HOH 35 36 36 HOH WAT A . D 4 HOH 36 37 37 HOH WAT A . D 4 HOH 37 38 38 HOH WAT A . D 4 HOH 38 39 39 HOH WAT A . D 4 HOH 39 40 40 HOH WAT A . D 4 HOH 40 41 41 HOH WAT A . D 4 HOH 41 223 42 HOH WAT A . D 4 HOH 42 224 43 HOH WAT A . D 4 HOH 43 225 44 HOH WAT A . D 4 HOH 44 226 45 HOH WAT A . D 4 HOH 45 227 46 HOH WAT A . D 4 HOH 46 228 47 HOH WAT A . D 4 HOH 47 229 48 HOH WAT A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 86 A MSE 127 ? MET SELENOMETHIONINE 2 A MSE 173 A MSE 214 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-11-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ELVES . ? ? ? ? refinement ? ? ? 5 SOLVE . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A VAL 85 ? ? CD A LYS 92 ? ? 1.73 2 1 CD1 A LEU 126 ? ? OD2 A ASP 132 ? ? 1.74 3 1 CE1 A TYR 169 ? ? ND2 A ASN 173 ? ? 1.84 4 1 O A SER 192 ? ? O A HOH 17 ? ? 2.06 5 1 CD1 A LEU 126 ? ? CG A ASP 132 ? ? 2.16 6 1 CA A ALA 102 ? ? OE2 A GLU 105 ? ? 2.17 7 1 NE A ARG 160 ? ? O A ARG 202 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 126 ? ? CB A LEU 126 ? ? CG A LEU 126 ? ? 130.39 115.30 15.09 2.30 N 2 1 CB A ASP 132 ? ? CA A ASP 132 ? ? C A ASP 132 ? ? 91.17 110.40 -19.23 2.00 N 3 1 N A GLN 186 ? ? CA A GLN 186 ? ? C A GLN 186 ? ? 128.89 111.00 17.89 2.70 N 4 1 C A SER 192 ? ? N A VAL 193 ? ? CA A VAL 193 ? ? 103.87 121.70 -17.83 2.50 Y 5 1 CB A VAL 193 ? ? CA A VAL 193 ? ? C A VAL 193 ? ? 123.70 111.40 12.30 1.90 N 6 1 CB A VAL 219 ? ? CA A VAL 219 ? ? C A VAL 219 ? ? 99.41 111.40 -11.99 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 43 ? ? -144.20 55.93 2 1 ALA A 48 ? ? -53.20 107.84 3 1 LEU A 50 ? ? -46.84 -9.92 4 1 THR A 52 ? ? -51.03 0.34 5 1 PRO A 76 ? ? -38.00 -36.78 6 1 VAL A 85 ? ? -103.78 -158.11 7 1 SER A 87 ? ? -58.99 176.02 8 1 LEU A 150 ? ? -66.81 76.84 9 1 GLU A 153 ? ? 73.99 170.64 10 1 ASP A 157 ? ? 5.26 -52.42 11 1 SER A 184 ? ? -132.61 -38.56 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LEU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 185 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 186 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -126.27 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 188 ? A GLU 147 2 1 Y 1 A GLU 189 ? A GLU 148 3 1 Y 1 A GLU 190 ? A GLU 149 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 'MAGNESIUM ION' MG 4 water HOH #