HEADER TRANSFERASE 02-SEP-08 3ECT TITLE CRYSTAL STRUCTURE OF THE HEXAPEPTIDE-REPEAT CONTAINING- TITLE 2 ACETYLTRANSFERASE VCA0836 FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEXAPEPTIDE-REPEAT CONTAINING-ACETYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: VC_A0836; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ALPHA-BETA STRUCTURE, BETA-HELIX, TRANSFERASE, STRUCTURAL GENOMICS, KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,N.MALTSEVA,K.KWON,L.PAPAZISI,J.HASSEMAN,S.PETERSON, AUTHOR 2 W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 3 13-JUL-11 3ECT 1 VERSN REVDAT 2 24-FEB-09 3ECT 1 VERSN REVDAT 1 16-SEP-08 3ECT 0 JRNL AUTH Y.KIM,N.MALTSEVA,K.KWON,L.PAPAZISI,J.HASSEMAN,S.PETERSON, JRNL AUTH 2 W.F.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE HEXAPEPTIDE-REPEAT JRNL TITL 2 CONTAINING-ACETYLTRANSFERASE VCA0836 FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 6302 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 314 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 430 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1362 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 57.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.12000 REMARK 3 B22 (A**2) : 2.12000 REMARK 3 B33 (A**2) : -3.18000 REMARK 3 B12 (A**2) : 1.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.806 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.305 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.232 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.109 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1396 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1891 ; 1.620 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 175 ; 6.356 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;40.847 ;23.906 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 239 ;21.644 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;18.052 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 216 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1052 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 876 ; 0.708 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1415 ; 1.387 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 520 ; 2.143 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 476 ; 3.513 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 8.5982 -11.5431 47.4319 REMARK 3 T TENSOR REMARK 3 T11: 0.0939 T22: 0.0713 REMARK 3 T33: 0.2064 T12: 0.0240 REMARK 3 T13: 0.0684 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 3.1344 L22: 2.4741 REMARK 3 L33: 1.5367 L12: 0.0005 REMARK 3 L13: 1.1263 L23: -0.4022 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: 0.1889 S13: -0.1772 REMARK 3 S21: -0.3394 S22: 0.0395 S23: -0.2111 REMARK 3 S31: 0.0421 S32: 0.0026 S33: -0.0324 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ECT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-08. REMARK 100 THE RCSB ID CODE IS RCSB049161. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6617 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 31.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.75100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, DM, SHELXD, RESOLVE, COOT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02 M CALCIUM CHLORIDE, 0.1 M SODIUM REMARK 280 ACETATE, 30% MPD, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 36.65950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 21.16537 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 59.50500 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 36.65950 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 21.16537 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 59.50500 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 36.65950 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 21.16537 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 59.50500 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 36.65950 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 21.16537 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 59.50500 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 36.65950 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 21.16537 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 59.50500 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 36.65950 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 21.16537 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 59.50500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 42.33074 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 119.01000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 42.33074 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 119.01000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 42.33074 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 119.01000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 42.33074 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 119.01000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 42.33074 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 119.01000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 42.33074 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 119.01000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 193 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 261 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 212 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 194 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 2 REMARK 465 MSE A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 13 REMARK 465 PHE A 15 REMARK 465 ASP A 16 REMARK 465 GLY A 17 REMARK 465 PRO A 186 REMARK 465 ALA A 187 REMARK 465 GLU A 188 REMARK 465 SER A 189 REMARK 465 MSE A 190 REMARK 465 ALA A 191 REMARK 465 GLU A 192 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 27 O HOH A 222 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 90 55.22 -106.98 REMARK 500 ARG A 181 152.50 178.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 204 DISTANCE = 6.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 193 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 147 O REMARK 620 2 ASP A 165 OD1 80.0 REMARK 620 3 ASP A 165 OD2 129.5 49.6 REMARK 620 4 HOH A 240 O 83.6 81.1 89.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 194 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 262 O REMARK 620 2 HOH A 206 O 124.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 194 DBREF 3ECT A 1 192 UNP Q9KLB0 Q9KLB0_VIBCH 1 192 SEQADV 3ECT SER A -2 UNP Q9KLB0 EXPRESSION TAG SEQADV 3ECT ASN A -1 UNP Q9KLB0 EXPRESSION TAG SEQADV 3ECT ALA A 0 UNP Q9KLB0 EXPRESSION TAG SEQRES 1 A 195 SER ASN ALA MSE LYS MSE SER GLU LEU GLU LYS MSE LEU SEQRES 2 A 195 LYS GLY GLU HIS PHE ASP GLY ALA SER ALA GLU ILE GLU SEQRES 3 A 195 ALA LEU ARG SER GLN ALA GLY ARG LEU LYS LEU GLU ILE SEQRES 4 A 195 ASN GLN SER LEU ASP GLU ALA GLU ARG TYR ALA LEU GLN SEQRES 5 A 195 ARG GLU LEU PHE GLY HIS LEU GLY HIS LYS SER CYS VAL SEQRES 6 A 195 GLN PRO PRO PHE HIS CYS GLU PHE GLY LYS THR ILE ARG SEQRES 7 A 195 ILE GLY ASP HIS THR PHE ILE ASN MSE ASN VAL VAL MSE SEQRES 8 A 195 LEU ASP GLY ALA PRO ILE THR ILE GLY ASP HIS VAL LEU SEQRES 9 A 195 ILE GLY PRO SER THR GLN PHE TYR THR ALA SER HIS SER SEQRES 10 A 195 LEU ASP TYR ARG ARG ARG GLN ALA TRP GLU THR ILE CYS SEQRES 11 A 195 LYS PRO ILE VAL ILE GLU ASP ASP VAL TRP ILE GLY GLY SEQRES 12 A 195 ASN VAL VAL ILE ASN GLN GLY VAL THR ILE GLY ALA ARG SEQRES 13 A 195 SER VAL VAL ALA ALA ASN SER VAL VAL ASN GLN ASP VAL SEQRES 14 A 195 PRO PRO ASP THR LEU VAL GLY GLY THR PRO ALA ARG ILE SEQRES 15 A 195 LEU ARG SER LEU LYS ASP PRO ALA GLU SER MSE ALA GLU MODRES 3ECT MSE A 9 MET SELENOMETHIONINE MODRES 3ECT MSE A 84 MET SELENOMETHIONINE MODRES 3ECT MSE A 88 MET SELENOMETHIONINE HET MSE A 9 8 HET MSE A 84 8 HET MSE A 88 8 HET CA A 193 1 HET CA A 194 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 CA 2(CA 2+) FORMUL 4 HOH *68(H2 O) HELIX 1 1 LEU A 6 LYS A 11 1 6 HELIX 2 2 SER A 19 SER A 39 1 21 HELIX 3 3 ASP A 41 PHE A 53 1 13 HELIX 4 4 ASP A 116 GLN A 121 5 6 SHEET 1 A 5 HIS A 55 LEU A 56 0 SHEET 2 A 5 ILE A 74 ILE A 76 1 O ILE A 76 N HIS A 55 SHEET 3 A 5 ILE A 94 ILE A 96 1 O ILE A 96 N ARG A 75 SHEET 4 A 5 ILE A 130 ILE A 132 1 O ILE A 132 N THR A 95 SHEET 5 A 5 THR A 149 ILE A 150 1 O ILE A 150 N VAL A 131 SHEET 1 B 7 CYS A 61 VAL A 62 0 SHEET 2 B 7 PHE A 81 ILE A 82 1 O ILE A 82 N CYS A 61 SHEET 3 B 7 LEU A 101 ILE A 102 1 O ILE A 102 N PHE A 81 SHEET 4 B 7 TRP A 137 ILE A 138 1 O ILE A 138 N LEU A 101 SHEET 5 B 7 VAL A 155 VAL A 156 1 O VAL A 156 N TRP A 137 SHEET 6 B 7 THR A 170 GLY A 173 1 O THR A 170 N VAL A 155 SHEET 7 B 7 ARG A 178 SER A 182 -1 O LEU A 180 N LEU A 171 SHEET 1 C 5 PHE A 66 CYS A 68 0 SHEET 2 C 5 VAL A 86 LEU A 89 1 O VAL A 86 N HIS A 67 SHEET 3 C 5 GLN A 107 TYR A 109 1 O PHE A 108 N LEU A 89 SHEET 4 C 5 VAL A 143 ILE A 144 1 O ILE A 144 N TYR A 109 SHEET 5 C 5 VAL A 161 VAL A 162 1 O VAL A 162 N VAL A 143 SHEET 1 D 2 ALA A 111 SER A 112 0 SHEET 2 D 2 ILE A 126 CYS A 127 -1 O ILE A 126 N SER A 112 LINK C LYS A 8 N MSE A 9 1555 1555 1.34 LINK C MSE A 9 N LEU A 10 1555 1555 1.35 LINK C ASN A 83 N MSE A 84 1555 1555 1.33 LINK C MSE A 84 N ASN A 85 1555 1555 1.34 LINK C VAL A 87 N MSE A 88 1555 1555 1.34 LINK C MSE A 88 N LEU A 89 1555 1555 1.33 LINK O GLY A 147 CA CA A 193 1555 1555 2.17 LINK OD1 ASP A 165 CA CA A 193 1555 1555 2.83 LINK OD2 ASP A 165 CA CA A 193 1555 1555 2.51 LINK CA CA A 193 O HOH A 240 1555 1555 2.38 LINK CA CA A 194 O HOH A 262 1555 1555 2.27 LINK CA CA A 194 O HOH A 206 1555 1555 2.37 CISPEP 1 PRO A 64 PRO A 65 0 -4.38 CISPEP 2 THR A 175 PRO A 176 0 -7.10 SITE 1 AC1 3 GLY A 147 ASP A 165 HOH A 240 SITE 1 AC2 4 ASN A 141 ASN A 159 HOH A 206 HOH A 262 CRYST1 73.319 73.319 178.515 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013639 0.007874 0.000000 0.00000 SCALE2 0.000000 0.015749 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005602 0.00000