HEADER BIOSYNTHETIC PROTEIN 03-SEP-08 3EDN TITLE CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS PHENAZINE TITLE 2 BIOSYNTHESIS PROTEIN, PHZF FAMILY COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENAZINE BIOSYNTHESIS PROTEIN, PHZF FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX,ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 1392; SOURCE 5 STRAIN: AMES; SOURCE 6 GENE: BAS3216, BA_3469, GBAA3469; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DIAMINOPIMELATE EPIMERASE-LIKE FOLD, ALPHA AND BETA PROTEIN KEYWDS 2 CLASS, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS KEYWDS 3 OF INFECTIOUS DISEASES, CSGID, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ANDERSON,J.S.BRUNZELLE,O.ONOPRIYENKO,A.SAVCHENKO, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS AUTHOR 3 DISEASES (CSGID) REVDAT 2 24-FEB-09 3EDN 1 VERSN REVDAT 1 07-OCT-08 3EDN 0 JRNL AUTH S.M.ANDERSON,J.S.BRUNZELLE,O.ONOPRIYENKO, JRNL AUTH 2 A.SAVCHENKO,W.F.ANDERSON JRNL TITL CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS JRNL TITL 2 PHENAZINE BIOSYNTHESIS PROTEIN, PHZF FAMILY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 93368 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4709 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 269 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4856 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 84 REMARK 3 SOLVENT ATOMS : 885 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.451 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5043 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6871 ; 1.195 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 651 ; 6.015 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 234 ;35.465 ;25.043 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 889 ;12.574 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;18.864 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 759 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3812 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2521 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3425 ; 0.318 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 670 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 113 ; 0.205 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 54 ; 0.179 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3156 ; 1.094 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5015 ; 1.587 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2088 ; 1.242 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1834 ; 1.747 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 3EDN COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-08. REMARK 100 THE RCSB ID CODE IS RCSB049191. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-08; 07-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 105; NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 21-ID-G; 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856; 0.97625 REMARK 200 MONOCHROMATOR : C(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD; REMARK 200 MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93368 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 38.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.44500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M NH4SO4, 5% ISOPROPANOL, PH 7.0, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.04450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.08500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.81900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.08500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.04450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.81900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -175.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 181 70.80 -106.48 REMARK 500 HIS A 250 -54.06 71.03 REMARK 500 ASP A 265 79.52 -157.99 REMARK 500 ASN B 181 71.80 -111.74 REMARK 500 VAL B 244 -65.63 -103.99 REMARK 500 HIS B 250 -52.15 70.16 REMARK 500 HIS B 263 32.88 71.40 REMARK 500 ASP B 265 79.17 -159.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 309 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SIN A 308 O2 REMARK 620 2 SIN A 308 O3 98.7 REMARK 620 3 HOH A 310 O 86.7 173.6 REMARK 620 4 HOH B 619 O 174.4 86.2 88.5 REMARK 620 5 HOH B 620 O 92.4 82.6 93.8 91.0 REMARK 620 6 HOH A 311 O 81.1 94.0 90.1 95.9 172.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 300 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 306 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 307 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN A 308 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 309 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 300 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 301 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 304 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 305 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 306 DBREF 3EDN A 1 299 UNP Q81MV2 Q81MV2_BACAN 1 299 DBREF 3EDN B 1 299 UNP Q81MV2 Q81MV2_BACAN 1 299 SEQRES 1 A 299 MSE LYS THR ILE ASN VAL PHE HIS TYR ASP ALA PHE THR SEQRES 2 A 299 ASN LYS PRO ASN MSE GLY ASN PRO ALA GLY ILE VAL LEU SEQRES 3 A 299 ASP ALA ASP GLY LEU THR GLU GLU GLU MSE GLN ARG ILE SEQRES 4 A 299 ALA GLU LYS VAL GLY PHE ASN GLU THR SER PHE VAL LEU SEQRES 5 A 299 SER SER GLU VAL ALA ASP ILE ARG MSE ARG TYR PHE THR SEQRES 6 A 299 PRO GLY TYR GLU MSE ASP LEU CYS GLY HIS GLY THR VAL SEQRES 7 A 299 GLY THR ILE TYR ALA LEU ARG GLU ARG GLY LEU LEU GLU SEQRES 8 A 299 GLU LYS ALA SER LEU THR ILE GLU THR LYS ALA GLY ILE SEQRES 9 A 299 LEU PRO ILE GLN ILE GLY VAL ASN GLU ASN GLY GLU THR SEQRES 10 A 299 PHE ILE LYS MSE ARG GLN THR ALA PRO GLN PHE LYS ASP SEQRES 11 A 299 PHE ALA GLY SER LYS GLU GLU LEU ALA HIS SER ILE GLY SEQRES 12 A 299 LEU GLU VAL ASN ASP LEU ASP VAL SER LEU PRO ILE VAL SEQRES 13 A 299 TYR GLY SER THR GLY ASN TRP THR VAL ILE VAL PRO VAL SEQRES 14 A 299 LYS ASN LEU ASP VAL CYS GLU ARG MSE LYS PRO ASN ASN SEQRES 15 A 299 GLU VAL PHE PRO SER VAL LEU LYS GLU ILE PRO ASN ALA SEQRES 16 A 299 SER ILE HIS PRO ILE CYS LEU GLU THR TYR ASP GLU LYS SEQRES 17 A 299 VAL HIS MSE HIS GLY ARG HIS PHE SER SER ALA TYR ALA SEQRES 18 A 299 GLY THR ILE GLU ASP PRO VAL THR GLY THR ALA SER GLY SEQRES 19 A 299 VAL MSE GLY ALA TYR TYR ALA THR TYR VAL GLU LYS ASP SEQRES 20 A 299 PHE ASP HIS GLU MSE GLU LEU ILE VAL GLU GLN GLY GLN SEQRES 21 A 299 GLU ILE HIS LYS ASP GLY ARG VAL THR VAL TYR VAL THR SEQRES 22 A 299 LYS ASP VAL GLU SER GLU LYS LEU GLN ILE ASP ILE ALA SEQRES 23 A 299 GLY THR ALA VAL TYR VAL LYS GLU PHE GLU VAL LEU ILE SEQRES 1 B 299 MSE LYS THR ILE ASN VAL PHE HIS TYR ASP ALA PHE THR SEQRES 2 B 299 ASN LYS PRO ASN MSE GLY ASN PRO ALA GLY ILE VAL LEU SEQRES 3 B 299 ASP ALA ASP GLY LEU THR GLU GLU GLU MSE GLN ARG ILE SEQRES 4 B 299 ALA GLU LYS VAL GLY PHE ASN GLU THR SER PHE VAL LEU SEQRES 5 B 299 SER SER GLU VAL ALA ASP ILE ARG MSE ARG TYR PHE THR SEQRES 6 B 299 PRO GLY TYR GLU MSE ASP LEU CYS GLY HIS GLY THR VAL SEQRES 7 B 299 GLY THR ILE TYR ALA LEU ARG GLU ARG GLY LEU LEU GLU SEQRES 8 B 299 GLU LYS ALA SER LEU THR ILE GLU THR LYS ALA GLY ILE SEQRES 9 B 299 LEU PRO ILE GLN ILE GLY VAL ASN GLU ASN GLY GLU THR SEQRES 10 B 299 PHE ILE LYS MSE ARG GLN THR ALA PRO GLN PHE LYS ASP SEQRES 11 B 299 PHE ALA GLY SER LYS GLU GLU LEU ALA HIS SER ILE GLY SEQRES 12 B 299 LEU GLU VAL ASN ASP LEU ASP VAL SER LEU PRO ILE VAL SEQRES 13 B 299 TYR GLY SER THR GLY ASN TRP THR VAL ILE VAL PRO VAL SEQRES 14 B 299 LYS ASN LEU ASP VAL CYS GLU ARG MSE LYS PRO ASN ASN SEQRES 15 B 299 GLU VAL PHE PRO SER VAL LEU LYS GLU ILE PRO ASN ALA SEQRES 16 B 299 SER ILE HIS PRO ILE CYS LEU GLU THR TYR ASP GLU LYS SEQRES 17 B 299 VAL HIS MSE HIS GLY ARG HIS PHE SER SER ALA TYR ALA SEQRES 18 B 299 GLY THR ILE GLU ASP PRO VAL THR GLY THR ALA SER GLY SEQRES 19 B 299 VAL MSE GLY ALA TYR TYR ALA THR TYR VAL GLU LYS ASP SEQRES 20 B 299 PHE ASP HIS GLU MSE GLU LEU ILE VAL GLU GLN GLY GLN SEQRES 21 B 299 GLU ILE HIS LYS ASP GLY ARG VAL THR VAL TYR VAL THR SEQRES 22 B 299 LYS ASP VAL GLU SER GLU LYS LEU GLN ILE ASP ILE ALA SEQRES 23 B 299 GLY THR ALA VAL TYR VAL LYS GLU PHE GLU VAL LEU ILE MODRES 3EDN MSE A 1 MET SELENOMETHIONINE MODRES 3EDN MSE A 18 MET SELENOMETHIONINE MODRES 3EDN MSE A 36 MET SELENOMETHIONINE MODRES 3EDN MSE A 61 MET SELENOMETHIONINE MODRES 3EDN MSE A 70 MET SELENOMETHIONINE MODRES 3EDN MSE A 121 MET SELENOMETHIONINE MODRES 3EDN MSE A 178 MET SELENOMETHIONINE MODRES 3EDN MSE A 211 MET SELENOMETHIONINE MODRES 3EDN MSE A 236 MET SELENOMETHIONINE MODRES 3EDN MSE A 252 MET SELENOMETHIONINE MODRES 3EDN MSE B 1 MET SELENOMETHIONINE MODRES 3EDN MSE B 18 MET SELENOMETHIONINE MODRES 3EDN MSE B 36 MET SELENOMETHIONINE MODRES 3EDN MSE B 61 MET SELENOMETHIONINE MODRES 3EDN MSE B 70 MET SELENOMETHIONINE MODRES 3EDN MSE B 121 MET SELENOMETHIONINE MODRES 3EDN MSE B 178 MET SELENOMETHIONINE MODRES 3EDN MSE B 211 MET SELENOMETHIONINE MODRES 3EDN MSE B 236 MET SELENOMETHIONINE MODRES 3EDN MSE B 252 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 18 13 HET MSE A 36 8 HET MSE A 61 8 HET MSE A 70 8 HET MSE A 121 8 HET MSE A 178 8 HET MSE A 211 8 HET MSE A 236 8 HET MSE A 252 13 HET MSE B 1 16 HET MSE B 18 8 HET MSE B 36 8 HET MSE B 61 8 HET MSE B 70 8 HET MSE B 121 8 HET MSE B 178 8 HET MSE B 211 8 HET MSE B 236 8 HET MSE B 252 8 HET SO4 A 300 5 HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SIN A 308 8 HET MG A 309 1 HET SO4 B 300 5 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET SO4 B 306 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM SIN SUCCINIC ACID HETNAM MG MAGNESIUM ION FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 SO4 15(O4 S 2-) FORMUL 11 SIN C4 H6 O4 FORMUL 12 MG MG 2+ FORMUL 20 HOH *865(H2 O) HELIX 1 1 THR A 32 GLY A 44 1 13 HELIX 2 2 CYS A 73 ARG A 87 1 15 HELIX 3 3 SER A 134 ILE A 142 1 9 HELIX 4 4 GLU A 145 LEU A 149 5 5 HELIX 5 5 ASN A 171 MSE A 178 1 8 HELIX 6 6 ASN A 181 GLU A 183 5 3 HELIX 7 7 VAL A 184 LEU A 189 1 6 HELIX 8 8 THR A 229 VAL A 244 1 16 HELIX 9 9 GLN A 260 HIS A 263 5 4 HELIX 10 10 THR B 32 GLY B 44 1 13 HELIX 11 11 CYS B 73 ARG B 87 1 15 HELIX 12 12 SER B 134 ILE B 142 1 9 HELIX 13 13 GLU B 145 LEU B 149 5 5 HELIX 14 14 ASN B 171 MSE B 178 1 8 HELIX 15 15 ASN B 181 GLU B 183 5 3 HELIX 16 16 VAL B 184 LEU B 189 1 6 HELIX 17 17 THR B 229 VAL B 244 1 16 HELIX 18 18 GLN B 260 HIS B 263 5 4 SHEET 1 A13 GLU A 69 MSE A 70 0 SHEET 2 A13 ILE A 59 PHE A 64 -1 N TYR A 63 O MSE A 70 SHEET 3 A13 SER A 95 THR A 100 1 O GLU A 99 N ILE A 59 SHEET 4 A13 GLY A 103 VAL A 111 -1 O ILE A 107 N LEU A 96 SHEET 5 A13 THR A 117 ARG A 122 -1 O PHE A 118 N GLY A 110 SHEET 6 A13 GLN A 282 GLY A 287 -1 O ILE A 285 N MSE A 121 SHEET 7 A13 GLY A 266 THR A 273 -1 N TYR A 271 O ASP A 284 SHEET 8 A13 GLU A 251 GLN A 258 -1 N LEU A 254 O VAL A 270 SHEET 9 A13 MSE A 211 GLY A 213 1 N MSE A 211 O GLU A 257 SHEET 10 A13 SER A 196 CYS A 201 -1 N CYS A 201 O HIS A 212 SHEET 11 A13 TRP A 163 PRO A 168 1 N VAL A 165 O HIS A 198 SHEET 12 A13 VAL A 156 SER A 159 -1 N GLY A 158 O THR A 164 SHEET 13 A13 GLN A 127 ASP A 130 -1 N LYS A 129 O TYR A 157 SHEET 1 B 6 GLU A 69 MSE A 70 0 SHEET 2 B 6 ILE A 59 PHE A 64 -1 N TYR A 63 O MSE A 70 SHEET 3 B 6 THR A 48 LEU A 52 -1 N LEU A 52 O ARG A 60 SHEET 4 B 6 ASN A 20 VAL A 25 1 N GLY A 23 O SER A 49 SHEET 5 B 6 LYS A 2 ALA A 11 -1 N PHE A 7 O ILE A 24 SHEET 6 B 6 ALA A 289 ILE A 299 -1 O LYS A 293 N HIS A 8 SHEET 1 C 2 HIS A 215 PHE A 216 0 SHEET 2 C 2 GLU A 225 ASP A 226 -1 O ASP A 226 N HIS A 215 SHEET 1 D13 GLU B 69 MSE B 70 0 SHEET 2 D13 ILE B 59 PHE B 64 -1 N TYR B 63 O MSE B 70 SHEET 3 D13 SER B 95 THR B 100 1 O GLU B 99 N ILE B 59 SHEET 4 D13 GLY B 103 VAL B 111 -1 O LEU B 105 N ILE B 98 SHEET 5 D13 THR B 117 ARG B 122 -1 O LYS B 120 N GLN B 108 SHEET 6 D13 LYS B 280 GLY B 287 -1 O ILE B 285 N MSE B 121 SHEET 7 D13 GLY B 266 ASP B 275 -1 N TYR B 271 O ASP B 284 SHEET 8 D13 GLU B 251 GLN B 258 -1 N LEU B 254 O VAL B 270 SHEET 9 D13 MSE B 211 GLY B 213 1 N MSE B 211 O GLU B 257 SHEET 10 D13 SER B 196 CYS B 201 -1 N CYS B 201 O HIS B 212 SHEET 11 D13 TRP B 163 PRO B 168 1 N VAL B 165 O HIS B 198 SHEET 12 D13 VAL B 156 SER B 159 -1 N GLY B 158 O THR B 164 SHEET 13 D13 GLN B 127 ASP B 130 -1 N LYS B 129 O TYR B 157 SHEET 1 E 6 GLU B 69 MSE B 70 0 SHEET 2 E 6 ILE B 59 PHE B 64 -1 N TYR B 63 O MSE B 70 SHEET 3 E 6 THR B 48 LEU B 52 -1 N LEU B 52 O ARG B 60 SHEET 4 E 6 ASN B 20 VAL B 25 1 N GLY B 23 O SER B 49 SHEET 5 E 6 LYS B 2 ALA B 11 -1 N PHE B 7 O ILE B 24 SHEET 6 E 6 ALA B 289 ILE B 299 -1 O VAL B 297 N ILE B 4 SHEET 1 F 2 HIS B 215 PHE B 216 0 SHEET 2 F 2 GLU B 225 ASP B 226 -1 O ASP B 226 N HIS B 215 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C ASN A 17 N MSE A 18 1555 1555 1.31 LINK C MSE A 18 N GLY A 19 1555 1555 1.33 LINK C GLU A 35 N MSE A 36 1555 1555 1.33 LINK C MSE A 36 N GLN A 37 1555 1555 1.33 LINK C ARG A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N ARG A 62 1555 1555 1.33 LINK C GLU A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N ASP A 71 1555 1555 1.33 LINK C LYS A 120 N MSE A 121 1555 1555 1.33 LINK C MSE A 121 N ARG A 122 1555 1555 1.33 LINK C ARG A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N LYS A 179 1555 1555 1.33 LINK C HIS A 210 N MSE A 211 1555 1555 1.33 LINK C MSE A 211 N HIS A 212 1555 1555 1.32 LINK C VAL A 235 N MSE A 236 1555 1555 1.33 LINK C MSE A 236 N GLY A 237 1555 1555 1.33 LINK C GLU A 251 N MSE A 252 1555 1555 1.33 LINK C MSE A 252 N GLU A 253 1555 1555 1.32 LINK C AMSE B 1 N LYS B 2 1555 1555 1.33 LINK C BMSE B 1 N LYS B 2 1555 1555 1.33 LINK C ASN B 17 N MSE B 18 1555 1555 1.33 LINK C MSE B 18 N GLY B 19 1555 1555 1.33 LINK C GLU B 35 N MSE B 36 1555 1555 1.32 LINK C MSE B 36 N GLN B 37 1555 1555 1.33 LINK C ARG B 60 N MSE B 61 1555 1555 1.33 LINK C MSE B 61 N ARG B 62 1555 1555 1.33 LINK C GLU B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N ASP B 71 1555 1555 1.33 LINK C LYS B 120 N MSE B 121 1555 1555 1.33 LINK C MSE B 121 N ARG B 122 1555 1555 1.33 LINK C ARG B 177 N MSE B 178 1555 1555 1.33 LINK C MSE B 178 N LYS B 179 1555 1555 1.33 LINK C HIS B 210 N MSE B 211 1555 1555 1.33 LINK C MSE B 211 N HIS B 212 1555 1555 1.33 LINK C VAL B 235 N MSE B 236 1555 1555 1.33 LINK C MSE B 236 N GLY B 237 1555 1555 1.33 LINK C GLU B 251 N MSE B 252 1555 1555 1.33 LINK C MSE B 252 N GLU B 253 1555 1555 1.33 LINK O2 SIN A 308 MG MG A 309 1555 1555 2.03 LINK O3 SIN A 308 MG MG A 309 1555 1555 2.05 LINK MG MG A 309 O HOH A 310 1555 1555 2.11 LINK MG MG A 309 O HOH B 619 1555 1555 2.01 LINK MG MG A 309 O HOH B 620 1555 1555 2.08 LINK MG MG A 309 O HOH A 311 1555 1555 2.05 SITE 1 AC1 12 PHE A 12 GLY A 74 HIS A 75 VAL A 228 SITE 2 AC1 12 THR A 229 GLY A 230 THR A 231 HOH A 366 SITE 3 AC1 12 HOH A 375 HOH A 404 HOH A 463 HOH A 487 SITE 1 AC2 10 PHE A 7 ARG A 87 GLU A 294 HOH A 365 SITE 2 AC2 10 HOH A 437 HOH A 639 HOH A 683 HOH A 688 SITE 3 AC2 10 GLU B 91 GLU B 92 SITE 1 AC3 6 ARG A 38 LYS A 42 LYS A 129 ASP A 130 SITE 2 AC3 6 HOH A 502 HOH A 616 SITE 1 AC4 9 ASN A 162 TRP A 163 ASN A 194 HOH A 344 SITE 2 AC4 9 HOH A 449 HOH A 461 HOH A 651 HOH A 678 SITE 3 AC4 9 HOH A 752 SITE 1 AC5 4 THR A 223 ILE A 224 GLU A 225 HOH A 711 SITE 1 AC6 5 ASP A 206 GLU A 207 LYS A 208 ARG A 267 SITE 2 AC6 5 HOH A 722 SITE 1 AC7 9 PHE A 248 ASP A 249 HOH A 350 HOH A 377 SITE 2 AC7 9 HOH A 402 HOH A 590 HOH A 672 GLU B 137 SITE 3 AC7 9 HIS B 140 SITE 1 AC8 6 ARG A 85 HOH A 472 HOH A 480 SER B 95 SITE 2 AC8 6 HOH B 704 HOH B 948 SITE 1 AC9 13 LEU A 31 MSE A 36 ARG A 60 ARG A 62 SITE 2 AC9 13 MG A 309 HOH A 310 HOH A 311 LEU B 31 SITE 3 AC9 13 MSE B 36 ARG B 60 ARG B 62 HOH B 619 SITE 4 AC9 13 HOH B 620 SITE 1 BC1 5 SIN A 308 HOH A 310 HOH A 311 HOH B 619 SITE 2 BC1 5 HOH B 620 SITE 1 BC2 11 GLY B 74 HIS B 75 VAL B 228 THR B 229 SITE 2 BC2 11 GLY B 230 THR B 231 HOH B 780 HOH B 787 SITE 3 BC2 11 HOH B 791 HOH B 822 HOH B 920 SITE 1 BC3 8 SER B 196 HIS B 215 SER B 217 SER B 218 SITE 2 BC3 8 ALA B 221 HOH B 747 HOH B 810 HOH B 868 SITE 1 BC4 8 GLU A 33 ARG A 62 LYS A 101 LYS A 246 SITE 2 BC4 8 GLU B 33 GLU B 34 HOH B 855 HOH B 911 SITE 1 BC5 5 LYS B 129 ASP B 130 HOH B 799 HOH B 882 SITE 2 BC5 5 HOH B 930 SITE 1 BC6 4 THR B 223 ILE B 224 GLU B 225 HOH B 979 SITE 1 BC7 6 HIS A 8 HOH A 352 HOH B 642 HOH B 732 SITE 2 BC7 6 HOH B 806 HOH B1013 SITE 1 BC8 4 HOH A 370 GLN B 108 LYS B 120 HOH B 862 CRYST1 60.089 65.638 150.170 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016642 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006659 0.00000 HETATM 1 N MSE A 1 -52.778 2.984 9.900 1.00 30.66 N HETATM 2 CA MSE A 1 -53.678 1.980 10.548 1.00 29.93 C HETATM 3 C MSE A 1 -53.650 0.656 9.803 1.00 28.24 C HETATM 4 O MSE A 1 -53.501 0.623 8.581 1.00 28.37 O HETATM 5 CB MSE A 1 -55.121 2.492 10.614 1.00 31.82 C HETATM 6 CG MSE A 1 -55.303 3.807 11.358 1.00 33.78 C HETATM 7 SE MSE A 1 -54.535 3.795 13.140 0.50 35.98 SE HETATM 8 CE MSE A 1 -55.737 2.502 13.958 1.00 35.53 C