HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-SEP-08 3EDP TITLE THE CRYSTAL STRUCTURE OF THE PROTEIN LIN2111 (FUNCTIONALLY UNKNOWN) TITLE 2 FROM LISTERIA INNOCUA CLIP11262 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIN2111 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; SOURCE 3 ORGANISM_TAXID: 1642; SOURCE 4 STRAIN: CLIP11262; SOURCE 5 GENE: LIN2111; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS APC88337, LIN2111, LISTERIA INNOCUA CLIP11262, STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, DNA-BINDING, TRANSCRIPTION, TRANSCRIPTION KEYWDS 4 REGULATION, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,M.GU,L.JAUREQUI,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 20-NOV-24 3EDP 1 REMARK LINK REVDAT 3 13-JUL-11 3EDP 1 VERSN REVDAT 2 24-FEB-09 3EDP 1 VERSN REVDAT 1 16-SEP-08 3EDP 0 JRNL AUTH K.TAN,M.GU,L.JAUREQUI,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF THE PROTEIN LIN2111 (FUNCTIONALLY JRNL TITL 2 UNKNOWN) FROM LISTERIA INNOCUA CLIP11262 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 75991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 3838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3766 - 6.2699 0.98 2640 171 0.2181 0.2253 REMARK 3 2 6.2699 - 4.9790 1.00 2693 153 0.1782 0.1844 REMARK 3 3 4.9790 - 4.3503 0.99 2689 151 0.1460 0.2453 REMARK 3 4 4.3503 - 3.9528 0.99 2657 160 0.1496 0.1767 REMARK 3 5 3.9528 - 3.6696 0.99 2650 159 0.1654 0.2005 REMARK 3 6 3.6696 - 3.4534 0.99 2693 144 0.1749 0.2338 REMARK 3 7 3.4534 - 3.2805 1.00 2709 160 0.1943 0.2733 REMARK 3 8 3.2805 - 3.1377 1.00 2748 111 0.2021 0.2211 REMARK 3 9 3.1377 - 3.0170 1.00 2689 128 0.2050 0.2446 REMARK 3 10 3.0170 - 2.9129 1.00 2748 109 0.2110 0.2982 REMARK 3 11 2.9129 - 2.8218 1.00 2710 143 0.1991 0.2638 REMARK 3 12 2.8218 - 2.7412 1.00 2685 156 0.2004 0.2519 REMARK 3 13 2.7412 - 2.6690 1.00 2689 175 0.1959 0.2312 REMARK 3 14 2.6690 - 2.6039 1.00 2716 118 0.1914 0.2114 REMARK 3 15 2.6039 - 2.5447 1.00 2686 164 0.2068 0.2538 REMARK 3 16 2.5447 - 2.4906 1.00 2736 121 0.2190 0.2811 REMARK 3 17 2.4906 - 2.4408 1.00 2734 129 0.2367 0.3372 REMARK 3 18 2.4408 - 2.3947 1.00 2603 155 0.2210 0.2735 REMARK 3 19 2.3947 - 2.3519 1.00 2783 120 0.2407 0.3198 REMARK 3 20 2.3519 - 2.3121 1.00 2703 145 0.2302 0.2872 REMARK 3 21 2.3121 - 2.2748 0.99 2635 150 0.2607 0.2675 REMARK 3 22 2.2748 - 2.2398 0.99 2717 151 0.2609 0.2944 REMARK 3 23 2.2398 - 2.2068 0.99 2720 129 0.2704 0.3406 REMARK 3 24 2.2068 - 2.1758 0.99 2677 164 0.2741 0.3272 REMARK 3 25 2.1758 - 2.1464 0.98 2651 110 0.2823 0.3072 REMARK 3 26 2.1464 - 2.1185 0.97 2600 150 0.2956 0.3469 REMARK 3 27 2.1185 - 2.0920 0.81 2192 112 0.3069 0.2956 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 66.92 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.69190 REMARK 3 B22 (A**2) : 10.64690 REMARK 3 B33 (A**2) : -9.95500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.07060 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 4:87 REMARK 3 ORIGIN FOR THE GROUP (A): 47.0827 24.7363 -9.2201 REMARK 3 T TENSOR REMARK 3 T11: 0.2616 T22: 0.2711 REMARK 3 T33: 0.3048 T12: 0.0158 REMARK 3 T13: 0.0246 T23: 0.0571 REMARK 3 L TENSOR REMARK 3 L11: -0.0571 L22: 0.9430 REMARK 3 L33: 1.3344 L12: 1.2682 REMARK 3 L13: -0.6304 L23: -1.2516 REMARK 3 S TENSOR REMARK 3 S11: -0.0855 S12: -0.0818 S13: -0.0693 REMARK 3 S21: -0.0221 S22: -0.0731 S23: -0.3490 REMARK 3 S31: 0.1625 S32: -0.1037 S33: 0.1258 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 93:233 REMARK 3 ORIGIN FOR THE GROUP (A): 32.4611 18.8148 12.9904 REMARK 3 T TENSOR REMARK 3 T11: 0.2259 T22: 0.1836 REMARK 3 T33: 0.1620 T12: -0.0355 REMARK 3 T13: -0.0413 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.7970 L22: 0.8140 REMARK 3 L33: 1.7089 L12: 0.0756 REMARK 3 L13: -0.9362 L23: -0.1071 REMARK 3 S TENSOR REMARK 3 S11: -0.1627 S12: 0.3114 S13: 0.0312 REMARK 3 S21: -0.1813 S22: 0.0265 S23: -0.0555 REMARK 3 S31: -0.1771 S32: -0.1457 S33: 0.1216 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND RESID 5:86 REMARK 3 ORIGIN FOR THE GROUP (A): 40.9162 4.8704 58.4549 REMARK 3 T TENSOR REMARK 3 T11: 0.2844 T22: 0.3152 REMARK 3 T33: 0.2597 T12: 0.0091 REMARK 3 T13: -0.0428 T23: 0.0465 REMARK 3 L TENSOR REMARK 3 L11: 0.5240 L22: 0.7198 REMARK 3 L33: 1.4302 L12: -1.3669 REMARK 3 L13: 0.7025 L23: -0.8633 REMARK 3 S TENSOR REMARK 3 S11: -0.0801 S12: -0.0454 S13: -0.0290 REMARK 3 S21: 0.0576 S22: 0.0339 S23: -0.2058 REMARK 3 S31: -0.1847 S32: -0.1571 S33: 0.0428 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 94:233 REMARK 3 ORIGIN FOR THE GROUP (A): 30.3941 11.5914 34.3594 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.2293 REMARK 3 T33: 0.1933 T12: 0.0234 REMARK 3 T13: 0.0288 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.0210 L22: 1.2789 REMARK 3 L33: 2.3736 L12: -0.0346 REMARK 3 L13: 0.2326 L23: 0.3147 REMARK 3 S TENSOR REMARK 3 S11: -0.2120 S12: -0.2342 S13: -0.0851 REMARK 3 S21: 0.2045 S22: 0.0371 S23: 0.0366 REMARK 3 S31: 0.0716 S32: -0.2669 S33: 0.1534 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EDP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75991 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.092 REMARK 200 RESOLUTION RANGE LOW (A) : 43.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.82500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M TRI-SODIUM CITRATE 0.1M SODIUM REMARK 280 CACODYLATE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.31000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS EXPERIMENTALLY REMARK 300 UNKNOWN. THE CHAINS A AND B ARE PREDICTED TO FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 MSE A 28 REMARK 465 LEU A 29 REMARK 465 ASN A 88 REMARK 465 ASP A 89 REMARK 465 THR A 90 REMARK 465 ASN A 91 REMARK 465 GLU A 92 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 LYS B 4 REMARK 465 MSE B 28 REMARK 465 LEU B 29 REMARK 465 LYS B 87 REMARK 465 ASN B 88 REMARK 465 ASP B 89 REMARK 465 THR B 90 REMARK 465 ASN B 91 REMARK 465 GLU B 92 REMARK 465 ASN B 93 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 64 94.35 -19.89 REMARK 500 VAL A 66 -71.08 -31.36 REMARK 500 HIS A 133 43.39 -96.90 REMARK 500 ASN B 64 113.64 -33.93 REMARK 500 VAL B 66 -53.93 -142.72 REMARK 500 LYS B 95 -165.95 -115.96 REMARK 500 SER B 131 -166.57 -129.14 REMARK 500 HIS B 133 77.29 -112.55 REMARK 500 ASN B 196 -2.51 81.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 236 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 236 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 237 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC88337 RELATED DB: TARGETDB DBREF 3EDP A 1 233 UNP Q92A11 Q92A11_LISIN 1 233 DBREF 3EDP B 1 233 UNP Q92A11 Q92A11_LISIN 1 233 SEQADV 3EDP SER A -2 UNP Q92A11 EXPRESSION TAG SEQADV 3EDP ASN A -1 UNP Q92A11 EXPRESSION TAG SEQADV 3EDP ALA A 0 UNP Q92A11 EXPRESSION TAG SEQADV 3EDP SER B -2 UNP Q92A11 EXPRESSION TAG SEQADV 3EDP ASN B -1 UNP Q92A11 EXPRESSION TAG SEQADV 3EDP ALA B 0 UNP Q92A11 EXPRESSION TAG SEQRES 1 A 236 SER ASN ALA MSE ALA ALA LYS LYS PRO LEU PHE GLU VAL SEQRES 2 A 236 ILE ALA SER LYS ILE LYS ASP SER ILE ASN ARG ASP GLU SEQRES 3 A 236 TYR LYS THR GLY MSE LEU MSE PRO ASN GLU THR ALA LEU SEQRES 4 A 236 GLN GLU ILE TYR SER SER SER ARG THR THR ILE ARG ARG SEQRES 5 A 236 ALA VAL ASP LEU LEU VAL GLU GLU GLY LEU VAL VAL ARG SEQRES 6 A 236 LYS ASN GLY VAL GLY LEU TYR VAL GLN PRO LYS LEU THR SEQRES 7 A 236 ALA GLN ASN ILE LEU GLU MSE THR GLY VAL MSE LYS ASN SEQRES 8 A 236 ASP THR ASN GLU ASN LEU LYS LYS ASP ILE LYS ASP PHE SEQRES 9 A 236 TYR ILE ARG LYS ALA GLY LYS PHE TYR ALA GLU ILE PHE SEQRES 10 A 236 GLY MSE LYS GLU ASN GLU LEU VAL TYR SER ILE LYS PHE SEQRES 11 A 236 VAL GLN LYS SER GLU HIS GLY ALA THR LEU ASP ARG LEU SEQRES 12 A 236 ILE LEU PRO LEU GLY LEU TYR PRO ASP LEU GLN ALA LYS SEQRES 13 A 236 ASP PHE GLN ILE ILE ASN ILE ILE GLU LEU VAL ASN SER SEQRES 14 A 236 GLY LYS TYR LYS LEU PHE GLU LEU GLU GLN GLU LEU GLN SEQRES 15 A 236 LEU ILE LEU ALA GLY ASN GLU GLN ILE LYS ASN MSE HIS SEQRES 16 A 236 LEU ASN GLU ASN ASP PRO VAL PHE LYS LEU SER SER VAL SEQRES 17 A 236 PHE TYR ALA GLU ASN ASP MSE PRO ILE ALA ILE GLN TYR SEQRES 18 A 236 HIS TYR GLU ASP ALA GLU SER THR LYS TYR VAL VAL ASP SEQRES 19 A 236 PHE ASN SEQRES 1 B 236 SER ASN ALA MSE ALA ALA LYS LYS PRO LEU PHE GLU VAL SEQRES 2 B 236 ILE ALA SER LYS ILE LYS ASP SER ILE ASN ARG ASP GLU SEQRES 3 B 236 TYR LYS THR GLY MSE LEU MSE PRO ASN GLU THR ALA LEU SEQRES 4 B 236 GLN GLU ILE TYR SER SER SER ARG THR THR ILE ARG ARG SEQRES 5 B 236 ALA VAL ASP LEU LEU VAL GLU GLU GLY LEU VAL VAL ARG SEQRES 6 B 236 LYS ASN GLY VAL GLY LEU TYR VAL GLN PRO LYS LEU THR SEQRES 7 B 236 ALA GLN ASN ILE LEU GLU MSE THR GLY VAL MSE LYS ASN SEQRES 8 B 236 ASP THR ASN GLU ASN LEU LYS LYS ASP ILE LYS ASP PHE SEQRES 9 B 236 TYR ILE ARG LYS ALA GLY LYS PHE TYR ALA GLU ILE PHE SEQRES 10 B 236 GLY MSE LYS GLU ASN GLU LEU VAL TYR SER ILE LYS PHE SEQRES 11 B 236 VAL GLN LYS SER GLU HIS GLY ALA THR LEU ASP ARG LEU SEQRES 12 B 236 ILE LEU PRO LEU GLY LEU TYR PRO ASP LEU GLN ALA LYS SEQRES 13 B 236 ASP PHE GLN ILE ILE ASN ILE ILE GLU LEU VAL ASN SER SEQRES 14 B 236 GLY LYS TYR LYS LEU PHE GLU LEU GLU GLN GLU LEU GLN SEQRES 15 B 236 LEU ILE LEU ALA GLY ASN GLU GLN ILE LYS ASN MSE HIS SEQRES 16 B 236 LEU ASN GLU ASN ASP PRO VAL PHE LYS LEU SER SER VAL SEQRES 17 B 236 PHE TYR ALA GLU ASN ASP MSE PRO ILE ALA ILE GLN TYR SEQRES 18 B 236 HIS TYR GLU ASP ALA GLU SER THR LYS TYR VAL VAL ASP SEQRES 19 B 236 PHE ASN MODRES 3EDP MSE A 30 MET SELENOMETHIONINE MODRES 3EDP MSE A 82 MET SELENOMETHIONINE MODRES 3EDP MSE A 86 MET SELENOMETHIONINE MODRES 3EDP MSE A 116 MET SELENOMETHIONINE MODRES 3EDP MSE A 191 MET SELENOMETHIONINE MODRES 3EDP MSE A 212 MET SELENOMETHIONINE MODRES 3EDP MSE B 30 MET SELENOMETHIONINE MODRES 3EDP MSE B 82 MET SELENOMETHIONINE MODRES 3EDP MSE B 86 MET SELENOMETHIONINE MODRES 3EDP MSE B 116 MET SELENOMETHIONINE MODRES 3EDP MSE B 191 MET SELENOMETHIONINE MODRES 3EDP MSE B 212 MET SELENOMETHIONINE HET MSE A 30 8 HET MSE A 82 8 HET MSE A 86 8 HET MSE A 116 8 HET MSE A 191 8 HET MSE A 212 8 HET MSE B 30 8 HET MSE B 82 8 HET MSE B 86 8 HET MSE B 116 8 HET MSE B 191 8 HET MSE B 212 8 HET GOL A 234 6 HET GOL A 235 6 HET GOL A 236 6 HET GOL B 234 6 HET GOL B 235 6 HET GOL B 236 6 HET GOL B 237 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 GOL 7(C3 H8 O3) FORMUL 10 HOH *149(H2 O) HELIX 1 1 PRO A 6 ARG A 21 1 16 HELIX 2 2 ASN A 32 TYR A 40 1 9 HELIX 3 3 SER A 43 GLU A 57 1 15 HELIX 4 4 THR A 75 GLY A 84 1 10 HELIX 5 5 ALA A 106 GLY A 115 1 10 HELIX 6 6 GLY A 145 TYR A 147 5 3 HELIX 7 7 GLN A 151 PHE A 155 5 5 HELIX 8 8 ASN A 159 ASN A 165 1 7 HELIX 9 9 GLY A 184 HIS A 192 1 9 HELIX 10 10 PRO B 6 ARG B 21 1 16 HELIX 11 11 ASN B 32 TYR B 40 1 9 HELIX 12 12 SER B 43 GLU B 57 1 15 HELIX 13 13 THR B 75 GLY B 84 1 10 HELIX 14 14 ALA B 106 GLY B 115 1 10 HELIX 15 15 GLY B 145 TYR B 147 5 3 HELIX 16 16 GLN B 151 PHE B 155 5 5 HELIX 17 17 ASN B 159 ASN B 165 1 7 HELIX 18 18 GLY B 184 HIS B 192 1 9 SHEET 1 A 2 VAL A 60 LYS A 63 0 SHEET 2 A 2 GLY A 67 VAL A 70 -1 O TYR A 69 N VAL A 61 SHEET 1 B 6 LYS A 96 LYS A 105 0 SHEET 2 B 6 LEU A 121 SER A 131 -1 O SER A 124 N TYR A 102 SHEET 3 B 6 GLY A 134 PRO A 143 -1 O LEU A 142 N TYR A 123 SHEET 4 B 6 MSE A 212 ASP A 222 -1 O TYR A 218 N ARG A 139 SHEET 5 B 6 PRO A 198 ALA A 208 -1 N ALA A 208 O MSE A 212 SHEET 6 B 6 GLU A 173 LEU A 182 -1 N GLU A 173 O TYR A 207 SHEET 1 C 2 TYR A 228 PHE A 232 0 SHEET 2 C 2 TYR B 228 PHE B 232 -1 O VAL B 229 N ASP A 231 SHEET 1 D 2 VAL B 60 LYS B 63 0 SHEET 2 D 2 GLY B 67 VAL B 70 -1 O GLY B 67 N LYS B 63 SHEET 1 E 6 LYS B 96 LYS B 105 0 SHEET 2 E 6 LEU B 121 SER B 131 -1 O LYS B 126 N LYS B 99 SHEET 3 E 6 GLY B 134 PRO B 143 -1 O LEU B 142 N TYR B 123 SHEET 4 E 6 MSE B 212 ASP B 222 -1 O ILE B 216 N ILE B 141 SHEET 5 E 6 PRO B 198 ALA B 208 -1 N LEU B 202 O HIS B 219 SHEET 6 E 6 GLU B 173 LEU B 182 -1 N GLU B 175 O VAL B 205 LINK C MSE A 30 N PRO A 31 1555 1555 1.35 LINK C GLU A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N THR A 83 1555 1555 1.33 LINK C VAL A 85 N MSE A 86 1555 1555 1.33 LINK C MSE A 86 N LYS A 87 1555 1555 1.33 LINK C GLY A 115 N MSE A 116 1555 1555 1.33 LINK C MSE A 116 N LYS A 117 1555 1555 1.33 LINK C ASN A 190 N MSE A 191 1555 1555 1.33 LINK C MSE A 191 N HIS A 192 1555 1555 1.33 LINK C ASP A 211 N MSE A 212 1555 1555 1.33 LINK C MSE A 212 N PRO A 213 1555 1555 1.34 LINK C MSE B 30 N PRO B 31 1555 1555 1.35 LINK C GLU B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N THR B 83 1555 1555 1.33 LINK C VAL B 85 N MSE B 86 1555 1555 1.33 LINK C GLY B 115 N MSE B 116 1555 1555 1.34 LINK C MSE B 116 N LYS B 117 1555 1555 1.33 LINK C ASN B 190 N MSE B 191 1555 1555 1.33 LINK C MSE B 191 N HIS B 192 1555 1555 1.33 LINK C ASP B 211 N MSE B 212 1555 1555 1.33 LINK C MSE B 212 N PRO B 213 1555 1555 1.34 SITE 1 AC1 2 ARG A 104 TYR A 110 SITE 1 AC2 1 ASP A 100 SITE 1 AC3 1 THR A 45 SITE 1 AC4 2 TYR B 102 HOH B 283 SITE 1 AC5 2 ARG B 104 TYR B 110 SITE 1 AC6 5 SER B 43 THR B 45 THR B 46 ARG B 49 SITE 2 AC6 5 HOH B 260 SITE 1 AC7 2 GLY B 145 LYS B 168 CRYST1 50.345 66.620 100.751 90.00 95.03 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019863 0.000000 0.001748 0.00000 SCALE2 0.000000 0.015011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009964 0.00000 CONECT 196 197 CONECT 197 196 198 200 CONECT 198 197 199 204 CONECT 199 198 CONECT 200 197 201 CONECT 201 200 202 CONECT 202 201 203 CONECT 203 202 CONECT 204 198 CONECT 596 603 CONECT 603 596 604 CONECT 604 603 605 607 CONECT 605 604 606 611 CONECT 606 605 CONECT 607 604 608 CONECT 608 607 609 CONECT 609 608 610 CONECT 610 609 CONECT 611 605 CONECT 624 629 CONECT 629 624 630 CONECT 630 629 631 633 CONECT 631 630 632 637 CONECT 632 631 CONECT 633 630 634 CONECT 634 633 635 CONECT 635 634 636 CONECT 636 635 CONECT 637 631 CONECT 840 842 CONECT 842 840 843 CONECT 843 842 844 846 CONECT 844 843 845 850 CONECT 845 844 CONECT 846 843 847 CONECT 847 846 848 CONECT 848 847 849 CONECT 849 848 CONECT 850 844 CONECT 1458 1464 CONECT 1464 1458 1465 CONECT 1465 1464 1466 1468 CONECT 1466 1465 1467 1472 CONECT 1467 1466 CONECT 1468 1465 1469 CONECT 1469 1468 1470 CONECT 1470 1469 1471 CONECT 1471 1470 CONECT 1472 1466 CONECT 1631 1637 CONECT 1637 1631 1638 CONECT 1638 1637 1639 1641 CONECT 1639 1638 1640 1645 CONECT 1640 1639 CONECT 1641 1638 1642 CONECT 1642 1641 1643 CONECT 1643 1642 1644 CONECT 1644 1643 CONECT 1645 1639 CONECT 2010 2011 CONECT 2011 2010 2012 2014 CONECT 2012 2011 2013 2018 CONECT 2013 2012 CONECT 2014 2011 2015 CONECT 2015 2014 2016 CONECT 2016 2015 2017 CONECT 2017 2016 CONECT 2018 2012 CONECT 2410 2417 CONECT 2417 2410 2418 CONECT 2418 2417 2419 2421 CONECT 2419 2418 2420 2425 CONECT 2420 2419 CONECT 2421 2418 2422 CONECT 2422 2421 2423 CONECT 2423 2422 2424 CONECT 2424 2423 CONECT 2425 2419 CONECT 2438 2443 CONECT 2443 2438 2444 CONECT 2444 2443 2445 2447 CONECT 2445 2444 2446 CONECT 2446 2445 CONECT 2447 2444 2448 CONECT 2448 2447 2449 CONECT 2449 2448 2450 CONECT 2450 2449 CONECT 2637 2639 CONECT 2639 2637 2640 CONECT 2640 2639 2641 2643 CONECT 2641 2640 2642 2647 CONECT 2642 2641 CONECT 2643 2640 2644 CONECT 2644 2643 2645 CONECT 2645 2644 2646 CONECT 2646 2645 CONECT 2647 2641 CONECT 3243 3249 CONECT 3249 3243 3250 CONECT 3250 3249 3251 3253 CONECT 3251 3250 3252 3257 CONECT 3252 3251 CONECT 3253 3250 3254 CONECT 3254 3253 3255 CONECT 3255 3254 3256 CONECT 3256 3255 CONECT 3257 3251 CONECT 3416 3422 CONECT 3422 3416 3423 CONECT 3423 3422 3424 3426 CONECT 3424 3423 3425 3430 CONECT 3425 3424 CONECT 3426 3423 3427 CONECT 3427 3426 3428 CONECT 3428 3427 3429 CONECT 3429 3428 CONECT 3430 3424 CONECT 3609 3610 3611 CONECT 3610 3609 CONECT 3611 3609 3612 3613 CONECT 3612 3611 CONECT 3613 3611 3614 CONECT 3614 3613 CONECT 3615 3616 3617 CONECT 3616 3615 CONECT 3617 3615 3618 3619 CONECT 3618 3617 CONECT 3619 3617 3620 CONECT 3620 3619 CONECT 3621 3622 3623 CONECT 3622 3621 CONECT 3623 3621 3624 3625 CONECT 3624 3623 CONECT 3625 3623 3626 CONECT 3626 3625 CONECT 3627 3628 3629 CONECT 3628 3627 CONECT 3629 3627 3630 3631 CONECT 3630 3629 CONECT 3631 3629 3632 CONECT 3632 3631 CONECT 3633 3634 3635 CONECT 3634 3633 CONECT 3635 3633 3636 3637 CONECT 3636 3635 CONECT 3637 3635 3638 CONECT 3638 3637 CONECT 3639 3640 3641 CONECT 3640 3639 CONECT 3641 3639 3642 3643 CONECT 3642 3641 CONECT 3643 3641 3644 CONECT 3644 3643 CONECT 3645 3646 3647 CONECT 3646 3645 CONECT 3647 3645 3648 3649 CONECT 3648 3647 CONECT 3649 3647 3650 CONECT 3650 3649 MASTER 366 0 19 18 18 0 8 6 3785 2 159 38 END