data_3EDS # _entry.id 3EDS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3EDS RCSB RCSB049196 WWPDB D_1000049196 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2011-07-20 _pdbx_database_PDB_obs_spr.pdb_id 3SMD _pdbx_database_PDB_obs_spr.replace_pdb_id 3EDS _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-11181d _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3EDS _pdbx_database_status.recvd_initial_deposition_date 2008-09-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Palani, K.' 1 'Kumaran, D.' 2 'Burley, S.K.' 3 'Swaminathan, S.' 4 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 5 # _citation.id primary _citation.title 'Crystal structure of a Mut/NUDIX family protein from Bacillus thuringiensis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Palani, K.' 1 primary 'Kumaran, D.' 2 primary 'Burley, S.K.' 3 primary 'Swaminathan, S.' 4 # _cell.entry_id 3EDS _cell.length_a 64.000 _cell.length_b 64.000 _cell.length_c 59.010 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EDS _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MutT/NUDIX family protein' 17570.672 1 3.6.1.- ? ? ? 2 water nat water 18.015 115 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MSLSLYYKKIREQLGHELIF(BIU)PSVAAVIKNEQGEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGLKVQV KKQKGVFGGKEYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLALPYPDKIFLEGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLSLYYKKIREQLGHELIFIPSVAAVIKNEQGEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQK GVFGGKEYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLALPYPDKIFLEGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-11181d # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LEU n 1 4 SER n 1 5 LEU n 1 6 TYR n 1 7 TYR n 1 8 LYS n 1 9 LYS n 1 10 ILE n 1 11 ARG n 1 12 GLU n 1 13 GLN n 1 14 LEU n 1 15 GLY n 1 16 HIS n 1 17 GLU n 1 18 LEU n 1 19 ILE n 1 20 PHE n 1 21 BIU n 1 22 PRO n 1 23 SER n 1 24 VAL n 1 25 ALA n 1 26 ALA n 1 27 VAL n 1 28 ILE n 1 29 LYS n 1 30 ASN n 1 31 GLU n 1 32 GLN n 1 33 GLY n 1 34 GLU n 1 35 ILE n 1 36 LEU n 1 37 PHE n 1 38 GLN n 1 39 TYR n 1 40 PRO n 1 41 GLY n 1 42 GLY n 1 43 GLU n 1 44 TYR n 1 45 TRP n 1 46 SER n 1 47 LEU n 1 48 PRO n 1 49 ALA n 1 50 GLY n 1 51 ALA n 1 52 ILE n 1 53 GLU n 1 54 LEU n 1 55 GLY n 1 56 GLU n 1 57 THR n 1 58 PRO n 1 59 GLU n 1 60 GLU n 1 61 ALA n 1 62 VAL n 1 63 VAL n 1 64 ARG n 1 65 GLU n 1 66 VAL n 1 67 TRP n 1 68 GLU n 1 69 GLU n 1 70 THR n 1 71 GLY n 1 72 LEU n 1 73 LYS n 1 74 VAL n 1 75 GLN n 1 76 VAL n 1 77 LYS n 1 78 LYS n 1 79 GLN n 1 80 LYS n 1 81 GLY n 1 82 VAL n 1 83 PHE n 1 84 GLY n 1 85 GLY n 1 86 LYS n 1 87 GLU n 1 88 TYR n 1 89 ARG n 1 90 TYR n 1 91 THR n 1 92 TYR n 1 93 SER n 1 94 ASN n 1 95 GLY n 1 96 ASP n 1 97 GLU n 1 98 VAL n 1 99 GLU n 1 100 TYR n 1 101 ILE n 1 102 VAL n 1 103 VAL n 1 104 VAL n 1 105 PHE n 1 106 GLU n 1 107 CYS n 1 108 GLU n 1 109 VAL n 1 110 THR n 1 111 SER n 1 112 GLY n 1 113 GLU n 1 114 LEU n 1 115 ARG n 1 116 SER n 1 117 ILE n 1 118 ASP n 1 119 GLY n 1 120 GLU n 1 121 SER n 1 122 LEU n 1 123 LYS n 1 124 LEU n 1 125 GLN n 1 126 TYR n 1 127 PHE n 1 128 SER n 1 129 LEU n 1 130 SER n 1 131 GLU n 1 132 LYS n 1 133 PRO n 1 134 PRO n 1 135 LEU n 1 136 ALA n 1 137 LEU n 1 138 PRO n 1 139 TYR n 1 140 PRO n 1 141 ASP n 1 142 LYS n 1 143 ILE n 1 144 PHE n 1 145 LEU n 1 146 GLU n 1 147 GLY n 1 148 HIS n 1 149 HIS n 1 150 HIS n 1 151 HIS n 1 152 HIS n 1 153 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BALH_2480 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus thuringiensis str. Al Hakam' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 412694 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'BC-pSGX3 (BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0REX4_BACAH _struct_ref.pdbx_db_accession A0REX4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLYYKKIREQLGHELIFIPSVAAVIKNEQGEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVF GGKEYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLALPYPDKIFL ; _struct_ref.pdbx_align_begin 53 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3EDS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 145 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0REX4 _struct_ref_seq.db_align_beg 53 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 194 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 53 _struct_ref_seq.pdbx_auth_seq_align_end 194 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BIU 'L-peptide linking' n 5-bromo-L-isoleucine ? 'C6 H12 Br N O2' 210.069 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3EDS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1M HEPES-Na, 10% isopropanal, 20% PEG4000 , pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2008-08-17 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(III)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9205 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9205 # _reflns.entry_id 3EDS _reflns.observed_criterion_sigma_I 0.00 _reflns.observed_criterion_sigma_F 0.00 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.76 _reflns.number_obs 14215 _reflns.number_all 14215 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.0 _reflns.B_iso_Wilson_estimate 28.0 _reflns.pdbx_redundancy 21.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.76 _reflns_shell.d_res_low 1.82 _reflns_shell.percent_possible_all 94.9 _reflns_shell.Rmerge_I_obs 0.447 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4 _reflns_shell.pdbx_redundancy 18.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1324 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3EDS _refine.ls_number_reflns_obs 13825 _refine.ls_number_reflns_all 14215 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 123240.09 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.40 _refine.ls_d_res_high 1.76 _refine.ls_percent_reflns_obs 97.1 _refine.ls_R_factor_obs 0.243 _refine.ls_R_factor_all 0.261 _refine.ls_R_factor_R_work 0.243 _refine.ls_R_factor_R_free 0.275 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 696 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 23.5 _refine.aniso_B[1][1] 2.84 _refine.aniso_B[2][2] 2.84 _refine.aniso_B[3][3] -5.69 _refine.aniso_B[1][2] 0.27 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.346531 _refine.solvent_model_param_bsol 23.3607 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3EDS _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.07 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1085 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 1200 _refine_hist.d_res_high 1.76 _refine_hist.d_res_low 40.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.52 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.76 _refine_ls_shell.d_res_low 1.87 _refine_ls_shell.number_reflns_R_work 2001 _refine_ls_shell.R_factor_R_work 0.280 _refine_ls_shell.percent_reflns_obs 91.0 _refine_ls_shell.R_factor_R_free 0.294 _refine_ls_shell.R_factor_R_free_error 0.029 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein2.param protein2.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 carbohydrate.param carbohydrate.top 'X-RAY DIFFRACTION' # _struct.entry_id 3EDS _struct.title 'Crystal structure of a Mut/NUDIX family protein from Bacillus thuringiensis' _struct.pdbx_descriptor 'MutT/NUDIX family protein (E.C.3.6.1.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EDS _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Mut/NUDIX protein, Protein Structure Initiative II(PSI II), NYSGXRC, 11181d, Structural Genomics, New York SGX Research Center for Structural Genomics, Hydrolase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? GLY A 15 ? SER A 53 GLY A 64 1 ? 12 HELX_P HELX_P2 2 THR A 57 ? GLY A 71 ? THR A 106 GLY A 120 1 ? 15 HELX_P HELX_P3 3 GLY A 85 ? GLU A 87 ? GLY A 134 GLU A 136 5 ? 3 HELX_P HELX_P4 4 SER A 128 ? LYS A 132 ? SER A 177 LYS A 181 5 ? 5 HELX_P HELX_P5 5 PRO A 140 ? PHE A 144 ? PRO A 189 PHE A 193 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PHE 20 C ? ? ? 1_555 A BIU 21 N ? ? A PHE 69 A BIU 70 1_555 ? ? ? ? ? ? ? 1.293 ? covale2 covale ? ? A BIU 21 C ? ? ? 1_555 A PRO 22 N ? ? A BIU 70 A PRO 71 1_555 ? ? ? ? ? ? ? 1.369 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 49 ? ALA A 51 ? ALA A 98 ALA A 100 A 2 ILE A 19 ? ILE A 28 ? ILE A 68 ILE A 77 A 3 GLU A 97 ? GLY A 112 ? GLU A 146 GLY A 161 A 4 LEU A 72 ? PHE A 83 ? LEU A 121 PHE A 132 B 1 ALA A 49 ? ALA A 51 ? ALA A 98 ALA A 100 B 2 ILE A 19 ? ILE A 28 ? ILE A 68 ILE A 77 B 3 GLU A 97 ? GLY A 112 ? GLU A 146 GLY A 161 B 4 ARG A 89 ? THR A 91 ? ARG A 138 THR A 140 C 1 ILE A 35 ? GLN A 38 ? ILE A 84 GLN A 87 C 2 LEU A 124 ? PHE A 127 ? LEU A 173 PHE A 176 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 50 ? O GLY A 99 N VAL A 24 ? N VAL A 73 A 2 3 N SER A 23 ? N SER A 72 O ILE A 101 ? O ILE A 150 A 3 4 O VAL A 104 ? O VAL A 153 N LYS A 80 ? N LYS A 129 B 1 2 O GLY A 50 ? O GLY A 99 N VAL A 24 ? N VAL A 73 B 2 3 N SER A 23 ? N SER A 72 O ILE A 101 ? O ILE A 150 B 3 4 O VAL A 98 ? O VAL A 147 N TYR A 90 ? N TYR A 139 C 1 2 N ILE A 35 ? N ILE A 84 O PHE A 127 ? O PHE A 176 # _database_PDB_matrix.entry_id 3EDS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3EDS _atom_sites.fract_transf_matrix[1][1] 0.015625 _atom_sites.fract_transf_matrix[1][2] 0.009021 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018042 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016946 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 50 ? ? ? A . n A 1 2 SER 2 51 ? ? ? A . n A 1 3 LEU 3 52 52 LEU LEU A . n A 1 4 SER 4 53 53 SER SER A . n A 1 5 LEU 5 54 54 LEU LEU A . n A 1 6 TYR 6 55 55 TYR TYR A . n A 1 7 TYR 7 56 56 TYR TYR A . n A 1 8 LYS 8 57 57 LYS LYS A . n A 1 9 LYS 9 58 58 LYS LYS A . n A 1 10 ILE 10 59 59 ILE ILE A . n A 1 11 ARG 11 60 60 ARG ARG A . n A 1 12 GLU 12 61 61 GLU GLU A . n A 1 13 GLN 13 62 62 GLN GLN A . n A 1 14 LEU 14 63 63 LEU LEU A . n A 1 15 GLY 15 64 64 GLY GLY A . n A 1 16 HIS 16 65 65 HIS HIS A . n A 1 17 GLU 17 66 66 GLU GLU A . n A 1 18 LEU 18 67 67 LEU LEU A . n A 1 19 ILE 19 68 68 ILE ILE A . n A 1 20 PHE 20 69 69 PHE PHE A . n A 1 21 BIU 21 70 70 BIU IBR A . n A 1 22 PRO 22 71 71 PRO PRO A . n A 1 23 SER 23 72 72 SER SER A . n A 1 24 VAL 24 73 73 VAL VAL A . n A 1 25 ALA 25 74 74 ALA ALA A . n A 1 26 ALA 26 75 75 ALA ALA A . n A 1 27 VAL 27 76 76 VAL VAL A . n A 1 28 ILE 28 77 77 ILE ILE A . n A 1 29 LYS 29 78 78 LYS LYS A . n A 1 30 ASN 30 79 79 ASN ASN A . n A 1 31 GLU 31 80 80 GLU GLU A . n A 1 32 GLN 32 81 81 GLN GLN A . n A 1 33 GLY 33 82 82 GLY GLY A . n A 1 34 GLU 34 83 83 GLU GLU A . n A 1 35 ILE 35 84 84 ILE ILE A . n A 1 36 LEU 36 85 85 LEU LEU A . n A 1 37 PHE 37 86 86 PHE PHE A . n A 1 38 GLN 38 87 87 GLN GLN A . n A 1 39 TYR 39 88 88 TYR TYR A . n A 1 40 PRO 40 89 89 PRO PRO A . n A 1 41 GLY 41 90 ? ? ? A . n A 1 42 GLY 42 91 ? ? ? A . n A 1 43 GLU 43 92 ? ? ? A . n A 1 44 TYR 44 93 93 TYR TYR A . n A 1 45 TRP 45 94 94 TRP TRP A . n A 1 46 SER 46 95 95 SER SER A . n A 1 47 LEU 47 96 96 LEU LEU A . n A 1 48 PRO 48 97 97 PRO PRO A . n A 1 49 ALA 49 98 98 ALA ALA A . n A 1 50 GLY 50 99 99 GLY GLY A . n A 1 51 ALA 51 100 100 ALA ALA A . n A 1 52 ILE 52 101 101 ILE ILE A . n A 1 53 GLU 53 102 102 GLU GLU A . n A 1 54 LEU 54 103 103 LEU LEU A . n A 1 55 GLY 55 104 104 GLY GLY A . n A 1 56 GLU 56 105 105 GLU GLU A . n A 1 57 THR 57 106 106 THR THR A . n A 1 58 PRO 58 107 107 PRO PRO A . n A 1 59 GLU 59 108 108 GLU GLU A . n A 1 60 GLU 60 109 109 GLU GLU A . n A 1 61 ALA 61 110 110 ALA ALA A . n A 1 62 VAL 62 111 111 VAL VAL A . n A 1 63 VAL 63 112 112 VAL VAL A . n A 1 64 ARG 64 113 113 ARG ARG A . n A 1 65 GLU 65 114 114 GLU GLU A . n A 1 66 VAL 66 115 115 VAL VAL A . n A 1 67 TRP 67 116 116 TRP TRP A . n A 1 68 GLU 68 117 117 GLU GLU A . n A 1 69 GLU 69 118 118 GLU GLU A . n A 1 70 THR 70 119 119 THR THR A . n A 1 71 GLY 71 120 120 GLY GLY A . n A 1 72 LEU 72 121 121 LEU LEU A . n A 1 73 LYS 73 122 122 LYS LYS A . n A 1 74 VAL 74 123 123 VAL VAL A . n A 1 75 GLN 75 124 124 GLN GLN A . n A 1 76 VAL 76 125 125 VAL VAL A . n A 1 77 LYS 77 126 126 LYS LYS A . n A 1 78 LYS 78 127 127 LYS LYS A . n A 1 79 GLN 79 128 128 GLN GLN A . n A 1 80 LYS 80 129 129 LYS LYS A . n A 1 81 GLY 81 130 130 GLY GLY A . n A 1 82 VAL 82 131 131 VAL VAL A . n A 1 83 PHE 83 132 132 PHE PHE A . n A 1 84 GLY 84 133 133 GLY GLY A . n A 1 85 GLY 85 134 134 GLY GLY A . n A 1 86 LYS 86 135 135 LYS LYS A . n A 1 87 GLU 87 136 136 GLU GLU A . n A 1 88 TYR 88 137 137 TYR TYR A . n A 1 89 ARG 89 138 138 ARG ARG A . n A 1 90 TYR 90 139 139 TYR TYR A . n A 1 91 THR 91 140 140 THR THR A . n A 1 92 TYR 92 141 141 TYR TYR A . n A 1 93 SER 93 142 142 SER SER A . n A 1 94 ASN 94 143 143 ASN ASN A . n A 1 95 GLY 95 144 144 GLY GLY A . n A 1 96 ASP 96 145 145 ASP ASP A . n A 1 97 GLU 97 146 146 GLU GLU A . n A 1 98 VAL 98 147 147 VAL VAL A . n A 1 99 GLU 99 148 148 GLU GLU A . n A 1 100 TYR 100 149 149 TYR TYR A . n A 1 101 ILE 101 150 150 ILE ILE A . n A 1 102 VAL 102 151 151 VAL VAL A . n A 1 103 VAL 103 152 152 VAL VAL A . n A 1 104 VAL 104 153 153 VAL VAL A . n A 1 105 PHE 105 154 154 PHE PHE A . n A 1 106 GLU 106 155 155 GLU GLU A . n A 1 107 CYS 107 156 156 CYS CYS A . n A 1 108 GLU 108 157 157 GLU GLU A . n A 1 109 VAL 109 158 158 VAL VAL A . n A 1 110 THR 110 159 159 THR THR A . n A 1 111 SER 111 160 160 SER SER A . n A 1 112 GLY 112 161 161 GLY GLY A . n A 1 113 GLU 113 162 162 GLU GLU A . n A 1 114 LEU 114 163 163 LEU LEU A . n A 1 115 ARG 115 164 164 ARG ARG A . n A 1 116 SER 116 165 ? ? ? A . n A 1 117 ILE 117 166 ? ? ? A . n A 1 118 ASP 118 167 ? ? ? A . n A 1 119 GLY 119 168 ? ? ? A . n A 1 120 GLU 120 169 ? ? ? A . n A 1 121 SER 121 170 ? ? ? A . n A 1 122 LEU 122 171 ? ? ? A . n A 1 123 LYS 123 172 172 LYS LYS A . n A 1 124 LEU 124 173 173 LEU LEU A . n A 1 125 GLN 125 174 174 GLN GLN A . n A 1 126 TYR 126 175 175 TYR TYR A . n A 1 127 PHE 127 176 176 PHE PHE A . n A 1 128 SER 128 177 177 SER SER A . n A 1 129 LEU 129 178 178 LEU LEU A . n A 1 130 SER 130 179 179 SER SER A . n A 1 131 GLU 131 180 180 GLU GLU A . n A 1 132 LYS 132 181 181 LYS LYS A . n A 1 133 PRO 133 182 182 PRO PRO A . n A 1 134 PRO 134 183 183 PRO PRO A . n A 1 135 LEU 135 184 184 LEU LEU A . n A 1 136 ALA 136 185 185 ALA ALA A . n A 1 137 LEU 137 186 186 LEU LEU A . n A 1 138 PRO 138 187 187 PRO PRO A . n A 1 139 TYR 139 188 188 TYR TYR A . n A 1 140 PRO 140 189 189 PRO PRO A . n A 1 141 ASP 141 190 190 ASP ASP A . n A 1 142 LYS 142 191 191 LYS LYS A . n A 1 143 ILE 143 192 192 ILE ILE A . n A 1 144 PHE 144 193 193 PHE PHE A . n A 1 145 LEU 145 194 194 LEU LEU A . n A 1 146 GLU 146 195 ? ? ? A . n A 1 147 GLY 147 196 ? ? ? A . n A 1 148 HIS 148 197 ? ? ? A . n A 1 149 HIS 149 198 ? ? ? A . n A 1 150 HIS 150 199 ? ? ? A . n A 1 151 HIS 151 200 ? ? ? A . n A 1 152 HIS 152 201 ? ? ? A . n A 1 153 HIS 153 202 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 203 1 HOH TIP A . B 2 HOH 2 204 2 HOH TIP A . B 2 HOH 3 205 3 HOH TIP A . B 2 HOH 4 206 4 HOH TIP A . B 2 HOH 5 207 5 HOH TIP A . B 2 HOH 6 208 6 HOH TIP A . B 2 HOH 7 209 7 HOH TIP A . B 2 HOH 8 210 8 HOH TIP A . B 2 HOH 9 211 9 HOH TIP A . B 2 HOH 10 212 10 HOH TIP A . B 2 HOH 11 213 11 HOH TIP A . B 2 HOH 12 214 12 HOH TIP A . B 2 HOH 13 215 13 HOH TIP A . B 2 HOH 14 216 14 HOH TIP A . B 2 HOH 15 217 15 HOH TIP A . B 2 HOH 16 218 16 HOH TIP A . B 2 HOH 17 219 17 HOH TIP A . B 2 HOH 18 220 18 HOH TIP A . B 2 HOH 19 221 19 HOH TIP A . B 2 HOH 20 222 20 HOH TIP A . B 2 HOH 21 223 21 HOH TIP A . B 2 HOH 22 224 22 HOH TIP A . B 2 HOH 23 225 23 HOH TIP A . B 2 HOH 24 226 24 HOH TIP A . B 2 HOH 25 227 25 HOH TIP A . B 2 HOH 26 228 26 HOH TIP A . B 2 HOH 27 229 27 HOH TIP A . B 2 HOH 28 230 28 HOH TIP A . B 2 HOH 29 231 29 HOH TIP A . B 2 HOH 30 232 30 HOH TIP A . B 2 HOH 31 233 31 HOH TIP A . B 2 HOH 32 234 32 HOH TIP A . B 2 HOH 33 235 33 HOH TIP A . B 2 HOH 34 236 34 HOH TIP A . B 2 HOH 35 237 35 HOH TIP A . B 2 HOH 36 238 36 HOH TIP A . B 2 HOH 37 239 37 HOH TIP A . B 2 HOH 38 240 38 HOH TIP A . B 2 HOH 39 241 39 HOH TIP A . B 2 HOH 40 242 40 HOH TIP A . B 2 HOH 41 243 41 HOH TIP A . B 2 HOH 42 244 42 HOH TIP A . B 2 HOH 43 245 43 HOH TIP A . B 2 HOH 44 246 44 HOH TIP A . B 2 HOH 45 247 45 HOH TIP A . B 2 HOH 46 248 46 HOH TIP A . B 2 HOH 47 249 47 HOH TIP A . B 2 HOH 48 250 48 HOH TIP A . B 2 HOH 49 251 49 HOH TIP A . B 2 HOH 50 252 50 HOH TIP A . B 2 HOH 51 253 51 HOH TIP A . B 2 HOH 52 254 52 HOH TIP A . B 2 HOH 53 255 53 HOH TIP A . B 2 HOH 54 256 54 HOH TIP A . B 2 HOH 55 257 55 HOH TIP A . B 2 HOH 56 258 56 HOH TIP A . B 2 HOH 57 259 57 HOH TIP A . B 2 HOH 58 260 58 HOH TIP A . B 2 HOH 59 261 59 HOH TIP A . B 2 HOH 60 262 60 HOH TIP A . B 2 HOH 61 263 61 HOH TIP A . B 2 HOH 62 264 62 HOH TIP A . B 2 HOH 63 265 63 HOH TIP A . B 2 HOH 64 266 64 HOH TIP A . B 2 HOH 65 267 65 HOH TIP A . B 2 HOH 66 268 66 HOH TIP A . B 2 HOH 67 269 67 HOH TIP A . B 2 HOH 68 270 68 HOH TIP A . B 2 HOH 69 271 69 HOH TIP A . B 2 HOH 70 272 70 HOH TIP A . B 2 HOH 71 273 71 HOH TIP A . B 2 HOH 72 274 72 HOH TIP A . B 2 HOH 73 275 73 HOH TIP A . B 2 HOH 74 276 74 HOH TIP A . B 2 HOH 75 277 75 HOH TIP A . B 2 HOH 76 278 76 HOH TIP A . B 2 HOH 77 279 77 HOH TIP A . B 2 HOH 78 280 78 HOH TIP A . B 2 HOH 79 281 79 HOH TIP A . B 2 HOH 80 282 80 HOH TIP A . B 2 HOH 81 283 81 HOH TIP A . B 2 HOH 82 284 82 HOH TIP A . B 2 HOH 83 285 83 HOH TIP A . B 2 HOH 84 286 84 HOH TIP A . B 2 HOH 85 287 85 HOH TIP A . B 2 HOH 86 288 86 HOH TIP A . B 2 HOH 87 289 87 HOH TIP A . B 2 HOH 88 290 88 HOH TIP A . B 2 HOH 89 291 89 HOH TIP A . B 2 HOH 90 292 90 HOH TIP A . B 2 HOH 91 293 91 HOH TIP A . B 2 HOH 92 294 92 HOH TIP A . B 2 HOH 93 295 93 HOH TIP A . B 2 HOH 94 296 94 HOH TIP A . B 2 HOH 95 297 95 HOH TIP A . B 2 HOH 96 298 96 HOH TIP A . B 2 HOH 97 299 97 HOH TIP A . B 2 HOH 98 300 98 HOH TIP A . B 2 HOH 99 301 99 HOH TIP A . B 2 HOH 100 302 100 HOH TIP A . B 2 HOH 101 303 101 HOH TIP A . B 2 HOH 102 304 102 HOH TIP A . B 2 HOH 103 305 103 HOH TIP A . B 2 HOH 104 306 104 HOH TIP A . B 2 HOH 105 307 105 HOH TIP A . B 2 HOH 106 308 106 HOH TIP A . B 2 HOH 107 309 107 HOH TIP A . B 2 HOH 108 310 108 HOH TIP A . B 2 HOH 109 311 109 HOH TIP A . B 2 HOH 110 312 110 HOH TIP A . B 2 HOH 111 313 111 HOH TIP A . B 2 HOH 112 314 112 HOH TIP A . B 2 HOH 113 315 113 HOH TIP A . B 2 HOH 114 316 114 HOH TIP A . B 2 HOH 115 317 115 HOH TIP A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id BIU _pdbx_struct_mod_residue.label_seq_id 21 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id BIU _pdbx_struct_mod_residue.auth_seq_id 70 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ILE _pdbx_struct_mod_residue.details 5-BROMO-L-ISOLEUCINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B 2 1 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2060 ? 1 MORE -15 ? 1 'SSA (A^2)' 13970 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_764 -x+2,-x+y+1,-z-1/3 -0.5000000000 -0.8660254038 0.0000000000 96.0000000000 -0.8660254038 0.5000000000 0.0000000000 55.4256258422 0.0000000000 0.0000000000 -1.0000000000 -19.6700000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 3 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 CBASS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SHELXD phasing . ? 5 SHARP phasing . ? 6 ARP/wARP phasing . ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 BIU A 70 ? ? -174.25 103.37 2 1 LYS A 126 ? ? -92.00 -60.32 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 50 ? A MET 1 2 1 Y 1 A SER 51 ? A SER 2 3 1 Y 1 A GLY 90 ? A GLY 41 4 1 Y 1 A GLY 91 ? A GLY 42 5 1 Y 1 A GLU 92 ? A GLU 43 6 1 Y 1 A SER 165 ? A SER 116 7 1 Y 1 A ILE 166 ? A ILE 117 8 1 Y 1 A ASP 167 ? A ASP 118 9 1 Y 1 A GLY 168 ? A GLY 119 10 1 Y 1 A GLU 169 ? A GLU 120 11 1 Y 1 A SER 170 ? A SER 121 12 1 Y 1 A LEU 171 ? A LEU 122 13 1 Y 1 A GLU 195 ? A GLU 146 14 1 Y 1 A GLY 196 ? A GLY 147 15 1 Y 1 A HIS 197 ? A HIS 148 16 1 Y 1 A HIS 198 ? A HIS 149 17 1 Y 1 A HIS 199 ? A HIS 150 18 1 Y 1 A HIS 200 ? A HIS 151 19 1 Y 1 A HIS 201 ? A HIS 152 20 1 Y 1 A HIS 202 ? A HIS 153 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #