HEADER TRANSFERASE 05-SEP-08 3EEV TITLE CRYSTAL STRUCTURE OF CHLORAMPHENICOL ACETYLTRANSFERASE VCA0300 FROM TITLE 2 VIBRIO CHOLERAE O1 BIOVAR ELTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHLORAMPHENICOL ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: CATB9, VC_A0300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS BETA-HELIX, STRUCTURAL GENOMICS, TRANSFERASE, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,N.MALTSEVA,K.KWON,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 30-AUG-23 3EEV 1 REMARK SEQADV REVDAT 3 13-JUL-11 3EEV 1 VERSN REVDAT 2 24-FEB-09 3EEV 1 VERSN REVDAT 1 16-SEP-08 3EEV 0 JRNL AUTH Y.KIM,N.MALTSEVA,K.KWON,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF CHLORAMPHENICOL ACETYLTRANSFERASE JRNL TITL 2 VCA0300 FROM VIBRIO CHOLERAE O1 BIOVAR ELTOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 21757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1177 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1558 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4926 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 218 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 48.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.09000 REMARK 3 B22 (A**2) : -1.09000 REMARK 3 B33 (A**2) : 1.63000 REMARK 3 B12 (A**2) : -0.54000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.027 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.314 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.219 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.715 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5109 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6938 ; 1.606 ; 1.915 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 619 ; 6.366 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 249 ;34.381 ;23.815 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 783 ;17.261 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;17.594 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 708 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3990 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3076 ; 0.682 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4957 ; 1.322 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2033 ; 2.261 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1981 ; 3.578 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): -45.9161 34.8480 1.5936 REMARK 3 T TENSOR REMARK 3 T11: 0.0216 T22: 0.0404 REMARK 3 T33: 0.1128 T12: -0.0136 REMARK 3 T13: 0.0039 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.2817 L22: 1.2338 REMARK 3 L33: 0.2439 L12: 0.0141 REMARK 3 L13: 0.2097 L23: -0.2464 REMARK 3 S TENSOR REMARK 3 S11: -0.0053 S12: -0.0273 S13: 0.0803 REMARK 3 S21: 0.0905 S22: -0.0036 S23: 0.0873 REMARK 3 S31: -0.0330 S32: 0.0097 S33: 0.0089 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 205 REMARK 3 ORIGIN FOR THE GROUP (A): -72.6974 20.1472 2.8609 REMARK 3 T TENSOR REMARK 3 T11: 0.0107 T22: 0.0180 REMARK 3 T33: 0.1789 T12: -0.0005 REMARK 3 T13: 0.0181 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.9018 L22: 1.0516 REMARK 3 L33: 0.4799 L12: 0.4693 REMARK 3 L13: 0.0707 L23: 0.0536 REMARK 3 S TENSOR REMARK 3 S11: -0.0192 S12: 0.0296 S13: 0.0387 REMARK 3 S21: 0.0649 S22: 0.0599 S23: 0.2688 REMARK 3 S31: 0.0394 S32: -0.0457 S33: -0.0406 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 208 REMARK 3 ORIGIN FOR THE GROUP (A): -46.6598 4.0571 -0.9053 REMARK 3 T TENSOR REMARK 3 T11: 0.0270 T22: 0.0152 REMARK 3 T33: 0.1055 T12: -0.0045 REMARK 3 T13: 0.0045 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.6952 L22: 0.5601 REMARK 3 L33: 0.4337 L12: 0.0199 REMARK 3 L13: -0.0337 L23: 0.0969 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: -0.0914 S13: -0.0649 REMARK 3 S21: 0.0484 S22: -0.0117 S23: 0.0785 REMARK 3 S31: 0.0084 S32: 0.0100 S33: 0.0005 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EEV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049235. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22994 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 32.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 2XAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM PHOSPHATE, 0.1 M TRIS REMARK 280 PH 8.5, 50 %V/V MPD, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.45800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.91600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 84.91600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.45800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 300 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 THR A 209 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 LYS B 206 REMARK 465 ALA B 207 REMARK 465 ARG B 208 REMARK 465 THR B 209 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 THR C 209 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 222 O HOH C 405 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 27 -34.22 76.10 REMARK 500 MET A 72 -166.40 -106.83 REMARK 500 GLU A 120 16.11 58.08 REMARK 500 SER A 153 176.70 86.34 REMARK 500 CYS A 192 45.92 -87.10 REMARK 500 HIS B 27 -27.65 68.42 REMARK 500 PHE B 89 -33.65 -35.15 REMARK 500 SER B 153 175.81 94.82 REMARK 500 CYS B 192 49.56 -94.04 REMARK 500 HIS C 27 -25.68 63.70 REMARK 500 SER C 38 -178.47 -66.03 REMARK 500 MET C 72 -165.93 -111.36 REMARK 500 GLU C 120 19.59 56.70 REMARK 500 SER C 153 -176.37 95.92 REMARK 500 ALA C 175 64.08 36.06 REMARK 500 CYS C 192 49.81 -104.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD C 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD C 211 DBREF 3EEV A 1 209 UNP Q9KMN1 Q9KMN1_VIBCH 1 209 DBREF 3EEV B 1 209 UNP Q9KMN1 Q9KMN1_VIBCH 1 209 DBREF 3EEV C 1 209 UNP Q9KMN1 Q9KMN1_VIBCH 1 209 SEQADV 3EEV SER A -2 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV ASN A -1 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV ALA A 0 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV SER B -2 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV ASN B -1 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV ALA B 0 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV SER C -2 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV ASN C -1 UNP Q9KMN1 EXPRESSION TAG SEQADV 3EEV ALA C 0 UNP Q9KMN1 EXPRESSION TAG SEQRES 1 A 212 SER ASN ALA MET ASN PHE PHE THR SER PRO PHE SER GLY SEQRES 2 A 212 ILE PRO LEU ASP GLN GLN VAL THR ASN PRO ASN ILE ILE SEQRES 3 A 212 VAL GLY LYS HIS SER TYR TYR SER GLY TYR TYR HIS GLY SEQRES 4 A 212 HIS SER PHE ASP ASP CYS VAL ARG TYR LEU HIS PRO GLU SEQRES 5 A 212 ARG ASP ASP VAL ASP LYS LEU VAL ILE GLY SER PHE CYS SEQRES 6 A 212 SER ILE GLY SER GLY ALA VAL PHE MET MET ALA GLY ASN SEQRES 7 A 212 GLN GLY HIS ARG SER ASP TRP ILE SER THR PHE PRO PHE SEQRES 8 A 212 PHE TYR GLN ASP ASN ASP ASN PHE ALA ASP ALA ARG ASP SEQRES 9 A 212 GLY PHE THR ARG SER GLY ASP THR ILE ILE GLY HIS ASP SEQRES 10 A 212 VAL TRP ILE GLY THR GLU ALA MET ILE MET PRO GLY VAL SEQRES 11 A 212 LYS ILE GLY HIS GLY ALA ILE ILE ALA SER ARG SER VAL SEQRES 12 A 212 VAL THR LYS ASP VAL ALA PRO TYR GLU VAL VAL GLY SER SEQRES 13 A 212 ASN PRO ALA LYS HIS ILE LYS PHE ARG PHE SER ASP VAL SEQRES 14 A 212 GLU ILE ALA MET LEU LEU GLU MET ALA TRP TRP ASN TRP SEQRES 15 A 212 PRO GLU SER TRP LEU LYS GLU SER MET GLN SER LEU CYS SEQRES 16 A 212 SER SER ASP ILE GLU GLY LEU TYR LEU ASN TRP GLN SER SEQRES 17 A 212 LYS ALA ARG THR SEQRES 1 B 212 SER ASN ALA MET ASN PHE PHE THR SER PRO PHE SER GLY SEQRES 2 B 212 ILE PRO LEU ASP GLN GLN VAL THR ASN PRO ASN ILE ILE SEQRES 3 B 212 VAL GLY LYS HIS SER TYR TYR SER GLY TYR TYR HIS GLY SEQRES 4 B 212 HIS SER PHE ASP ASP CYS VAL ARG TYR LEU HIS PRO GLU SEQRES 5 B 212 ARG ASP ASP VAL ASP LYS LEU VAL ILE GLY SER PHE CYS SEQRES 6 B 212 SER ILE GLY SER GLY ALA VAL PHE MET MET ALA GLY ASN SEQRES 7 B 212 GLN GLY HIS ARG SER ASP TRP ILE SER THR PHE PRO PHE SEQRES 8 B 212 PHE TYR GLN ASP ASN ASP ASN PHE ALA ASP ALA ARG ASP SEQRES 9 B 212 GLY PHE THR ARG SER GLY ASP THR ILE ILE GLY HIS ASP SEQRES 10 B 212 VAL TRP ILE GLY THR GLU ALA MET ILE MET PRO GLY VAL SEQRES 11 B 212 LYS ILE GLY HIS GLY ALA ILE ILE ALA SER ARG SER VAL SEQRES 12 B 212 VAL THR LYS ASP VAL ALA PRO TYR GLU VAL VAL GLY SER SEQRES 13 B 212 ASN PRO ALA LYS HIS ILE LYS PHE ARG PHE SER ASP VAL SEQRES 14 B 212 GLU ILE ALA MET LEU LEU GLU MET ALA TRP TRP ASN TRP SEQRES 15 B 212 PRO GLU SER TRP LEU LYS GLU SER MET GLN SER LEU CYS SEQRES 16 B 212 SER SER ASP ILE GLU GLY LEU TYR LEU ASN TRP GLN SER SEQRES 17 B 212 LYS ALA ARG THR SEQRES 1 C 212 SER ASN ALA MET ASN PHE PHE THR SER PRO PHE SER GLY SEQRES 2 C 212 ILE PRO LEU ASP GLN GLN VAL THR ASN PRO ASN ILE ILE SEQRES 3 C 212 VAL GLY LYS HIS SER TYR TYR SER GLY TYR TYR HIS GLY SEQRES 4 C 212 HIS SER PHE ASP ASP CYS VAL ARG TYR LEU HIS PRO GLU SEQRES 5 C 212 ARG ASP ASP VAL ASP LYS LEU VAL ILE GLY SER PHE CYS SEQRES 6 C 212 SER ILE GLY SER GLY ALA VAL PHE MET MET ALA GLY ASN SEQRES 7 C 212 GLN GLY HIS ARG SER ASP TRP ILE SER THR PHE PRO PHE SEQRES 8 C 212 PHE TYR GLN ASP ASN ASP ASN PHE ALA ASP ALA ARG ASP SEQRES 9 C 212 GLY PHE THR ARG SER GLY ASP THR ILE ILE GLY HIS ASP SEQRES 10 C 212 VAL TRP ILE GLY THR GLU ALA MET ILE MET PRO GLY VAL SEQRES 11 C 212 LYS ILE GLY HIS GLY ALA ILE ILE ALA SER ARG SER VAL SEQRES 12 C 212 VAL THR LYS ASP VAL ALA PRO TYR GLU VAL VAL GLY SER SEQRES 13 C 212 ASN PRO ALA LYS HIS ILE LYS PHE ARG PHE SER ASP VAL SEQRES 14 C 212 GLU ILE ALA MET LEU LEU GLU MET ALA TRP TRP ASN TRP SEQRES 15 C 212 PRO GLU SER TRP LEU LYS GLU SER MET GLN SER LEU CYS SEQRES 16 C 212 SER SER ASP ILE GLU GLY LEU TYR LEU ASN TRP GLN SER SEQRES 17 C 212 LYS ALA ARG THR HET MPD A 210 8 HET MPD C 210 8 HET MPD C 211 8 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 4 MPD 3(C6 H14 O2) FORMUL 7 HOH *218(H2 O) HELIX 1 1 ASP A 14 GLN A 16 5 3 HELIX 2 2 GLY A 32 GLY A 36 5 5 HELIX 3 3 SER A 38 ASP A 41 5 4 HELIX 4 4 PRO A 87 GLN A 91 5 5 HELIX 5 5 ASN A 93 ALA A 97 5 5 HELIX 6 6 SER A 164 ALA A 175 1 12 HELIX 7 7 TRP A 176 TRP A 179 5 4 HELIX 8 8 PRO A 180 SER A 187 1 8 HELIX 9 9 SER A 187 CYS A 192 1 6 HELIX 10 10 ASP A 195 ARG A 208 1 14 HELIX 11 11 ASP B 14 GLN B 16 5 3 HELIX 12 12 GLY B 32 GLY B 36 5 5 HELIX 13 13 SER B 38 ASP B 41 5 4 HELIX 14 14 PRO B 87 GLN B 91 5 5 HELIX 15 15 ASN B 93 ALA B 97 5 5 HELIX 16 16 SER B 164 ALA B 175 1 12 HELIX 17 17 TRP B 176 TRP B 179 5 4 HELIX 18 18 PRO B 180 CYS B 192 1 13 HELIX 19 19 ASP B 195 SER B 205 1 11 HELIX 20 20 ASP C 14 GLN C 16 5 3 HELIX 21 21 GLY C 32 GLY C 36 5 5 HELIX 22 22 SER C 38 ASP C 41 5 4 HELIX 23 23 PRO C 87 GLN C 91 5 5 HELIX 24 24 ASN C 93 ALA C 97 5 5 HELIX 25 25 SER C 164 ALA C 175 1 12 HELIX 26 26 TRP C 176 TRP C 179 5 4 HELIX 27 27 PRO C 180 SER C 187 1 8 HELIX 28 28 SER C 187 CYS C 192 1 6 HELIX 29 29 ASP C 195 ARG C 208 1 14 SHEET 1 A 7 ILE A 11 PRO A 12 0 SHEET 2 A 7 TYR A 29 TYR A 30 -1 O TYR A 30 N ILE A 11 SHEET 3 A 7 SER A 63 ILE A 64 1 O ILE A 64 N TYR A 29 SHEET 4 A 7 TRP A 116 ILE A 117 1 O ILE A 117 N SER A 63 SHEET 5 A 7 ILE A 134 ILE A 135 1 O ILE A 135 N TRP A 116 SHEET 6 A 7 GLU A 149 GLY A 152 1 O GLU A 149 N ILE A 134 SHEET 7 A 7 LYS A 157 PHE A 161 -1 O LYS A 157 N GLY A 152 SHEET 1 B 4 ILE A 22 VAL A 24 0 SHEET 2 B 4 LEU A 56 ILE A 58 1 O ILE A 58 N ILE A 23 SHEET 3 B 4 THR A 109 ILE A 111 1 O ILE A 111 N VAL A 57 SHEET 4 B 4 LYS A 128 ILE A 129 1 O ILE A 129 N ILE A 110 SHEET 1 C 4 VAL A 43 ARG A 44 0 SHEET 2 C 4 VAL A 69 MET A 71 1 O PHE A 70 N ARG A 44 SHEET 3 C 4 MET A 122 ILE A 123 1 O ILE A 123 N MET A 71 SHEET 4 C 4 VAL A 140 VAL A 141 1 O VAL A 141 N MET A 122 SHEET 1 D 7 ILE B 11 PRO B 12 0 SHEET 2 D 7 TYR B 29 SER B 31 -1 O TYR B 30 N ILE B 11 SHEET 3 D 7 SER B 63 GLY B 65 1 O ILE B 64 N SER B 31 SHEET 4 D 7 TRP B 116 ILE B 117 1 O ILE B 117 N SER B 63 SHEET 5 D 7 ILE B 134 ILE B 135 1 O ILE B 135 N TRP B 116 SHEET 6 D 7 GLU B 149 GLY B 152 1 O VAL B 151 N ILE B 134 SHEET 7 D 7 LYS B 157 PHE B 161 -1 O LYS B 160 N VAL B 150 SHEET 1 E 4 ILE B 22 VAL B 24 0 SHEET 2 E 4 LEU B 56 ILE B 58 1 O LEU B 56 N ILE B 23 SHEET 3 E 4 THR B 109 ILE B 111 1 O THR B 109 N VAL B 57 SHEET 4 E 4 LYS B 128 ILE B 129 1 O ILE B 129 N ILE B 110 SHEET 1 F 4 VAL B 43 ARG B 44 0 SHEET 2 F 4 VAL B 69 MET B 71 1 O PHE B 70 N ARG B 44 SHEET 3 F 4 MET B 122 ILE B 123 1 O ILE B 123 N VAL B 69 SHEET 4 F 4 VAL B 140 VAL B 141 1 O VAL B 141 N MET B 122 SHEET 1 G 7 ILE C 11 PRO C 12 0 SHEET 2 G 7 TYR C 29 TYR C 30 -1 O TYR C 30 N ILE C 11 SHEET 3 G 7 SER C 63 ILE C 64 1 O ILE C 64 N TYR C 29 SHEET 4 G 7 TRP C 116 ILE C 117 1 O ILE C 117 N SER C 63 SHEET 5 G 7 ILE C 134 ILE C 135 1 O ILE C 135 N TRP C 116 SHEET 6 G 7 GLU C 149 GLY C 152 1 O VAL C 151 N ILE C 134 SHEET 7 G 7 LYS C 157 PHE C 161 -1 O LYS C 160 N VAL C 150 SHEET 1 H 4 ILE C 22 VAL C 24 0 SHEET 2 H 4 LEU C 56 ILE C 58 1 O LEU C 56 N ILE C 23 SHEET 3 H 4 THR C 109 ILE C 111 1 O ILE C 111 N VAL C 57 SHEET 4 H 4 LYS C 128 ILE C 129 1 O ILE C 129 N ILE C 110 SHEET 1 I 4 VAL C 43 ARG C 44 0 SHEET 2 I 4 VAL C 69 MET C 71 1 O PHE C 70 N ARG C 44 SHEET 3 I 4 MET C 122 ILE C 123 1 O ILE C 123 N VAL C 69 SHEET 4 I 4 VAL C 140 VAL C 141 1 O VAL C 141 N MET C 122 CISPEP 1 ASN A 154 PRO A 155 0 3.76 CISPEP 2 ASN B 154 PRO B 155 0 -1.18 CISPEP 3 ASN C 154 PRO C 155 0 0.39 SITE 1 AC1 3 TRP A 116 SER A 137 HOH A 226 SITE 1 AC2 4 TRP C 116 ALA C 136 SER C 137 HOH C 220 SITE 1 AC3 6 TRP C 183 GLU C 186 SER C 187 LEU C 199 SITE 2 AC3 6 ASN C 202 LYS C 206 CRYST1 99.972 99.972 127.374 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010003 0.005775 0.000000 0.00000 SCALE2 0.000000 0.011550 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007851 0.00000