data_3EF8 # _entry.id 3EF8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EF8 pdb_00003ef8 10.2210/pdb3ef8/pdb RCSB RCSB049248 ? ? WWPDB D_1000049248 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 367578 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3EF8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-09-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.id primary _citation.title ;Crystal structure of Putative Scyalone Dehydratase (YP_496742.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.50 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3EF8 _cell.length_a 59.851 _cell.length_b 59.851 _cell.length_c 237.504 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EF8 _symmetry.Int_Tables_number 146 _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative Scyalone Dehydratase' 17572.805 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 5 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 4 ? ? ? ? 5 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 4 ? ? ? ? 6 water nat water 18.015 232 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)TDTNLVE(MSE)RAIER(MSE)(MSE)FDYSYHLD(MSE)NHPEELAALFVEDCEVSYAPNFGATGRDAYKKTL EGIGTFFRGTSHHNSNICIDFVSETEANVRSVVLAIHRYTKERPDGILYGQYFDTVVKVDGQWKFKRRELRTT(MSE)TT DYHVRAANPIGRAE ; _entity_poly.pdbx_seq_one_letter_code_can ;GMTDTNLVEMRAIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGTFFRGTSHHNSNICID FVSETEANVRSVVLAIHRYTKERPDGILYGQYFDTVVKVDGQWKFKRRELRTTMTTDYHVRAANPIGRAE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 367578 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 THR n 1 4 ASP n 1 5 THR n 1 6 ASN n 1 7 LEU n 1 8 VAL n 1 9 GLU n 1 10 MSE n 1 11 ARG n 1 12 ALA n 1 13 ILE n 1 14 GLU n 1 15 ARG n 1 16 MSE n 1 17 MSE n 1 18 PHE n 1 19 ASP n 1 20 TYR n 1 21 SER n 1 22 TYR n 1 23 HIS n 1 24 LEU n 1 25 ASP n 1 26 MSE n 1 27 ASN n 1 28 HIS n 1 29 PRO n 1 30 GLU n 1 31 GLU n 1 32 LEU n 1 33 ALA n 1 34 ALA n 1 35 LEU n 1 36 PHE n 1 37 VAL n 1 38 GLU n 1 39 ASP n 1 40 CYS n 1 41 GLU n 1 42 VAL n 1 43 SER n 1 44 TYR n 1 45 ALA n 1 46 PRO n 1 47 ASN n 1 48 PHE n 1 49 GLY n 1 50 ALA n 1 51 THR n 1 52 GLY n 1 53 ARG n 1 54 ASP n 1 55 ALA n 1 56 TYR n 1 57 LYS n 1 58 LYS n 1 59 THR n 1 60 LEU n 1 61 GLU n 1 62 GLY n 1 63 ILE n 1 64 GLY n 1 65 THR n 1 66 PHE n 1 67 PHE n 1 68 ARG n 1 69 GLY n 1 70 THR n 1 71 SER n 1 72 HIS n 1 73 HIS n 1 74 ASN n 1 75 SER n 1 76 ASN n 1 77 ILE n 1 78 CYS n 1 79 ILE n 1 80 ASP n 1 81 PHE n 1 82 VAL n 1 83 SER n 1 84 GLU n 1 85 THR n 1 86 GLU n 1 87 ALA n 1 88 ASN n 1 89 VAL n 1 90 ARG n 1 91 SER n 1 92 VAL n 1 93 VAL n 1 94 LEU n 1 95 ALA n 1 96 ILE n 1 97 HIS n 1 98 ARG n 1 99 TYR n 1 100 THR n 1 101 LYS n 1 102 GLU n 1 103 ARG n 1 104 PRO n 1 105 ASP n 1 106 GLY n 1 107 ILE n 1 108 LEU n 1 109 TYR n 1 110 GLY n 1 111 GLN n 1 112 TYR n 1 113 PHE n 1 114 ASP n 1 115 THR n 1 116 VAL n 1 117 VAL n 1 118 LYS n 1 119 VAL n 1 120 ASP n 1 121 GLY n 1 122 GLN n 1 123 TRP n 1 124 LYS n 1 125 PHE n 1 126 LYS n 1 127 ARG n 1 128 ARG n 1 129 GLU n 1 130 LEU n 1 131 ARG n 1 132 THR n 1 133 THR n 1 134 MSE n 1 135 THR n 1 136 THR n 1 137 ASP n 1 138 TYR n 1 139 HIS n 1 140 VAL n 1 141 ARG n 1 142 ALA n 1 143 ALA n 1 144 ASN n 1 145 PRO n 1 146 ILE n 1 147 GLY n 1 148 ARG n 1 149 ALA n 1 150 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YP_496742.1, Saro_1465' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Novosphingobium aromaticivorans DSM 12444' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 279238 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2G8B5_NOVAD _struct_ref.pdbx_db_accession Q2G8B5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTDTNLVEMRAIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGTFFRGTSHHNSNICIDF VSETEANVRSVVLAIHRYTKERPDGILYGQYFDTVVKVDGQWKFKRRELRTTMTTDYHVRAANPIGRAE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EF8 A 2 ? 150 ? Q2G8B5 1 ? 149 ? 1 149 2 1 3EF8 B 2 ? 150 ? Q2G8B5 1 ? 149 ? 1 149 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3EF8 GLY A 1 ? UNP Q2G8B5 ? ? 'expression tag' 0 1 2 3EF8 GLY B 1 ? UNP Q2G8B5 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3EF8 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M MgCl2, 20.0000% PEG-8000, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2008-02-22 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97905 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97905 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3EF8 _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 29.921 _reflns.number_obs 50820 _reflns.pdbx_Rmerge_I_obs 0.127 _reflns.pdbx_netI_over_sigmaI 3.731 _reflns.pdbx_Rsym_value 0.127 _reflns.pdbx_redundancy 7.600 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 12.779 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.50 1.54 ? 21365 ? 0.818 0.8 0.818 ? 5.60 ? 3783 99.90 ? 1 1.54 1.58 ? 20465 ? 0.729 0.8 0.729 ? 5.70 ? 3612 100.00 ? 2 1.58 1.63 ? 20208 ? 0.609 1.0 0.609 ? 5.70 ? 3564 100.00 ? 3 1.63 1.68 ? 19749 ? 0.523 1.2 0.523 ? 5.70 ? 3472 100.00 ? 4 1.68 1.73 ? 19164 ? 0.443 1.4 0.443 ? 5.70 ? 3361 100.00 ? 5 1.73 1.79 ? 18602 ? 0.375 1.7 0.375 ? 5.70 ? 3251 100.00 ? 6 1.79 1.86 ? 17911 ? 0.308 2.1 0.308 ? 5.70 ? 3122 100.00 ? 7 1.86 1.94 ? 24159 ? 0.237 2.7 0.237 ? 8.00 ? 3020 100.00 ? 8 1.94 2.02 ? 26144 ? 0.183 3.6 0.183 ? 9.00 ? 2907 100.00 ? 9 2.02 2.12 ? 26410 ? 0.159 4.1 0.159 ? 9.60 ? 2749 100.00 ? 10 2.12 2.24 ? 25257 ? 0.145 4.5 0.145 ? 9.60 ? 2634 100.00 ? 11 2.24 2.37 ? 23905 ? 0.134 4.7 0.134 ? 9.60 ? 2489 100.00 ? 12 2.37 2.54 ? 22233 ? 0.134 4.9 0.134 ? 9.60 ? 2314 100.00 ? 13 2.54 2.74 ? 20999 ? 0.124 5.2 0.124 ? 9.60 ? 2184 100.00 ? 14 2.74 3.00 ? 19322 ? 0.107 5.9 0.107 ? 9.60 ? 2014 100.00 ? 15 3.00 3.35 ? 17267 ? 0.091 6.6 0.091 ? 9.60 ? 1791 100.00 ? 16 3.35 3.87 ? 15324 ? 0.081 7.0 0.081 ? 9.60 ? 1588 100.00 ? 17 3.87 4.74 ? 12999 ? 0.075 7.0 0.075 ? 9.70 ? 1346 100.00 ? 18 4.74 6.71 ? 10084 ? 0.087 5.8 0.087 ? 9.50 ? 1057 100.00 ? 19 6.71 29.93 ? 5282 ? 0.090 5.2 0.090 ? 9.40 ? 562 99.10 ? 20 # _refine.entry_id 3EF8 _refine.ls_d_res_high 1.500 _refine.ls_d_res_low 29.921 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.990 _refine.ls_number_reflns_obs 50819 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3.A MAGNESIUM ION AND POLYETHYLENE GLYCOL FROM CRYSTALLIZATION AND CRYOPROTECTION CONDITIONS HAVE BEEN MODELED IN THE STRUCTURE. ; _refine.ls_R_factor_obs 0.164 _refine.ls_R_factor_R_work 0.163 _refine.ls_R_factor_R_free 0.188 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2579 _refine.B_iso_mean 17.512 _refine.aniso_B[1][1] 0.010 _refine.aniso_B[2][2] 0.010 _refine.aniso_B[3][3] -0.020 _refine.aniso_B[1][2] 0.010 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.pdbx_overall_ESU_R 0.068 _refine.pdbx_overall_ESU_R_Free 0.069 _refine.overall_SU_ML 0.041 _refine.overall_SU_B 1.047 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.B_iso_max 61.04 _refine.B_iso_min 2.60 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2435 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 93 _refine_hist.number_atoms_solvent 269 _refine_hist.number_atoms_total 2797 _refine_hist.d_res_high 1.500 _refine_hist.d_res_low 29.921 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2610 0.016 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1836 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3494 1.683 1.962 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4421 1.047 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 315 5.431 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 122 29.574 22.459 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 406 11.880 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24 16.623 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 370 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2871 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 571 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1538 1.717 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 624 0.471 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2488 2.766 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1072 4.163 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1006 6.085 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.970 _refine_ls_shell.number_reflns_R_work 3577 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.185 _refine_ls_shell.R_factor_R_free 0.220 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 205 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3782 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3EF8 _struct.title ;Crystal structure of Putative Scytalone Dehydratase (YP_496742.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.50 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_496742.1, Putative Scytalone Dehydratase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function, LYASE ; _struct_keywords.pdbx_keywords LYASE _struct_keywords.entry_id 3EF8 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 3 ? M N N 3 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 6 ? R N N 6 ? # _struct_biol.id 1 _struct_biol.details ;AUTHORS STATE THAT SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A TRIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MSE A 2 ? MSE A 26 ? MSE A 1 MSE A 25 1 ? 25 HELX_P HELX_P2 2 HIS A 28 ? ALA A 34 ? HIS A 27 ALA A 33 1 ? 7 HELX_P HELX_P3 3 GLY A 52 ? LEU A 60 ? GLY A 51 LEU A 59 1 ? 9 HELX_P HELX_P4 4 GLY A 62 ? PHE A 66 ? GLY A 61 PHE A 65 1 ? 5 HELX_P HELX_P5 5 MSE B 2 ? MSE B 26 ? MSE B 1 MSE B 25 1 ? 25 HELX_P HELX_P6 6 HIS B 28 ? ALA B 34 ? HIS B 27 ALA B 33 1 ? 7 HELX_P HELX_P7 7 GLY B 52 ? LEU B 60 ? GLY B 51 LEU B 59 1 ? 9 HELX_P HELX_P8 8 GLY B 62 ? PHE B 66 ? GLY B 61 PHE B 65 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale2 covale both ? A GLU 9 C ? ? ? 1_555 A MSE 10 N ? ? A GLU 8 A MSE 9 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? A MSE 10 C ? ? ? 1_555 A ARG 11 N ? ? A MSE 9 A ARG 10 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? A ARG 15 C ? ? ? 1_555 A MSE 16 N ? ? A ARG 14 A MSE 15 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A MSE 16 C ? ? ? 1_555 A MSE 17 N ? ? A MSE 15 A MSE 16 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 17 C ? ? ? 1_555 A PHE 18 N ? ? A MSE 16 A PHE 17 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale7 covale both ? A ASP 25 C ? ? ? 1_555 A MSE 26 N ? ? A ASP 24 A MSE 25 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? A MSE 26 C ? ? ? 1_555 A ASN 27 N ? ? A MSE 25 A ASN 26 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale9 covale both ? A THR 133 C ? ? ? 1_555 A MSE 134 N A ? A THR 132 A MSE 133 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale10 covale both ? A THR 133 C ? ? ? 1_555 A MSE 134 N B ? A THR 132 A MSE 133 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale11 covale both ? A MSE 134 C A ? ? 1_555 A THR 135 N ? ? A MSE 133 A THR 134 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? A MSE 134 C B ? ? 1_555 A THR 135 N ? ? A MSE 133 A THR 134 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? B MSE 2 C ? ? ? 1_555 B THR 3 N ? ? B MSE 1 B THR 2 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale14 covale both ? B GLU 9 C ? ? ? 1_555 B MSE 10 N ? ? B GLU 8 B MSE 9 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale15 covale both ? B MSE 10 C ? ? ? 1_555 B ARG 11 N ? ? B MSE 9 B ARG 10 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale16 covale both ? B ARG 15 C ? ? ? 1_555 B MSE 16 N ? ? B ARG 14 B MSE 15 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale17 covale both ? B MSE 16 C ? ? ? 1_555 B MSE 17 N ? ? B MSE 15 B MSE 16 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale18 covale both ? B MSE 17 C ? ? ? 1_555 B PHE 18 N ? ? B MSE 16 B PHE 17 1_555 ? ? ? ? ? ? ? 1.307 ? ? covale19 covale both ? B ASP 25 C ? ? ? 1_555 B MSE 26 N ? ? B ASP 24 B MSE 25 1_555 ? ? ? ? ? ? ? 1.302 ? ? covale20 covale both ? B MSE 26 C ? ? ? 1_555 B ASN 27 N ? ? B MSE 25 B ASN 26 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale21 covale both ? B THR 133 C ? ? ? 1_555 B MSE 134 N A ? B THR 132 B MSE 133 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale22 covale both ? B THR 133 C ? ? ? 1_555 B MSE 134 N B ? B THR 132 B MSE 133 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale23 covale both ? B MSE 134 C A ? ? 1_555 B THR 135 N ? ? B MSE 133 B THR 134 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale24 covale both ? B MSE 134 C B ? ? 1_555 B THR 135 N ? ? B MSE 133 B THR 134 1_555 ? ? ? ? ? ? ? 1.336 ? ? metalc1 metalc ? ? C MG . MG ? ? ? 1_555 Q HOH . O ? ? A MG 150 A HOH 196 1_555 ? ? ? ? ? ? ? 2.150 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 Q HOH . O ? ? A MG 150 A HOH 220 1_555 ? ? ? ? ? ? ? 2.069 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 48 ? THR A 51 ? PHE A 47 THR A 50 A 2 PHE A 36 ? ALA A 45 ? PHE A 35 ALA A 44 A 3 GLN A 122 ? THR A 136 ? GLN A 121 THR A 135 A 4 GLY A 106 ? VAL A 119 ? GLY A 105 VAL A 118 A 5 GLU A 86 ? TYR A 99 ? GLU A 85 TYR A 98 A 6 PHE A 67 ? SER A 83 ? PHE A 66 SER A 82 B 1 PHE B 48 ? THR B 51 ? PHE B 47 THR B 50 B 2 PHE B 36 ? ALA B 45 ? PHE B 35 ALA B 44 B 3 GLN B 122 ? THR B 136 ? GLN B 121 THR B 135 B 4 GLY B 106 ? VAL B 119 ? GLY B 105 VAL B 118 B 5 GLU B 86 ? TYR B 99 ? GLU B 85 TYR B 98 B 6 PHE B 67 ? SER B 83 ? PHE B 66 SER B 82 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 48 ? O PHE A 47 N TYR A 44 ? N TYR A 43 A 2 3 N SER A 43 ? N SER A 42 O LEU A 130 ? O LEU A 129 A 3 4 O ARG A 131 ? O ARG A 130 N GLN A 111 ? N GLN A 110 A 4 5 O ASP A 114 ? O ASP A 113 N VAL A 89 ? N VAL A 88 A 5 6 O ARG A 98 ? O ARG A 97 N GLY A 69 ? N GLY A 68 B 1 2 O PHE B 48 ? O PHE B 47 N TYR B 44 ? N TYR B 43 B 2 3 N SER B 43 ? N SER B 42 O LEU B 130 ? O LEU B 129 B 3 4 O ARG B 131 ? O ARG B 130 N GLN B 111 ? N GLN B 110 B 4 5 O ASP B 114 ? O ASP B 113 N VAL B 89 ? N VAL B 88 B 5 6 O ARG B 90 ? O ARG B 89 N CYS B 78 ? N CYS B 77 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 150 ? 2 'BINDING SITE FOR RESIDUE MG A 150' AC2 Software A PEG 151 ? 2 'BINDING SITE FOR RESIDUE PEG A 151' AC3 Software A PEG 152 ? 4 'BINDING SITE FOR RESIDUE PEG A 152' AC4 Software A PEG 153 ? 1 'BINDING SITE FOR RESIDUE PEG A 153' AC5 Software B PEG 150 ? 6 'BINDING SITE FOR RESIDUE PEG B 150' AC6 Software B PEG 151 ? 2 'BINDING SITE FOR RESIDUE PEG B 151' AC7 Software A PGE 154 ? 7 'BINDING SITE FOR RESIDUE PGE A 154' AC8 Software A PGE 155 ? 4 'BINDING SITE FOR RESIDUE PGE A 155' AC9 Software A PGE 156 ? 7 'BINDING SITE FOR RESIDUE PGE A 156' BC1 Software A PGE 157 ? 8 'BINDING SITE FOR RESIDUE PGE A 157' BC2 Software B PG4 152 ? 7 'BINDING SITE FOR RESIDUE PG4 B 152' BC3 Software A PG4 158 ? 6 'BINDING SITE FOR RESIDUE PG4 A 158' BC4 Software B PG4 153 ? 8 'BINDING SITE FOR RESIDUE PG4 B 153' BC5 Software B PG4 154 ? 4 'BINDING SITE FOR RESIDUE PG4 B 154' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HOH Q . ? HOH A 196 . ? 2_665 ? 2 AC1 2 HOH Q . ? HOH A 220 . ? 2_665 ? 3 AC2 2 ARG A 98 ? ARG A 97 . ? 2_555 ? 4 AC2 2 THR A 133 ? THR A 132 . ? 1_555 ? 5 AC3 4 ARG A 15 ? ARG A 14 . ? 1_555 ? 6 AC3 4 ASP A 80 ? ASP A 79 . ? 3_555 ? 7 AC3 4 GLN A 122 ? GLN A 121 . ? 1_555 ? 8 AC3 4 LYS B 101 ? LYS B 100 . ? 3_555 ? 9 AC4 1 GLU A 102 ? GLU A 101 . ? 1_555 ? 10 AC5 6 ASP B 80 ? ASP B 79 . ? 1_555 ? 11 AC5 6 ASN B 88 ? ASN B 87 . ? 1_555 ? 12 AC5 6 VAL B 89 ? VAL B 88 . ? 1_555 ? 13 AC5 6 PHE B 113 ? PHE B 112 . ? 1_555 ? 14 AC5 6 ASP B 114 ? ASP B 113 . ? 1_555 ? 15 AC5 6 HOH R . ? HOH B 218 . ? 1_555 ? 16 AC6 2 GLU B 9 ? GLU B 8 . ? 1_555 ? 17 AC6 2 GLU B 84 ? GLU B 83 . ? 1_555 ? 18 AC7 7 VAL A 8 ? VAL A 7 . ? 1_555 ? 19 AC7 7 GLU A 9 ? GLU A 8 . ? 1_555 ? 20 AC7 7 ALA A 12 ? ALA A 11 . ? 1_555 ? 21 AC7 7 LYS A 118 ? LYS A 117 . ? 1_555 ? 22 AC7 7 HOH Q . ? HOH A 195 . ? 1_555 ? 23 AC7 7 HOH Q . ? HOH A 206 . ? 1_555 ? 24 AC7 7 HOH Q . ? HOH A 219 . ? 1_555 ? 25 AC8 4 ASP A 39 ? ASP A 38 . ? 1_555 ? 26 AC8 4 GLU A 41 ? GLU A 40 . ? 1_555 ? 27 AC8 4 GLU A 86 ? GLU A 85 . ? 1_555 ? 28 AC8 4 LYS A 126 ? LYS A 125 . ? 1_555 ? 29 AC9 7 ARG A 15 ? ARG A 14 . ? 2_555 ? 30 AC9 7 CYS A 78 ? CYS A 77 . ? 1_555 ? 31 AC9 7 ASP A 80 ? ASP A 79 . ? 1_555 ? 32 AC9 7 ASN A 88 ? ASN A 87 . ? 1_555 ? 33 AC9 7 VAL A 89 ? VAL A 88 . ? 1_555 ? 34 AC9 7 ARG A 90 ? ARG A 89 . ? 1_555 ? 35 AC9 7 ASP A 114 ? ASP A 113 . ? 1_555 ? 36 BC1 8 ASN A 6 ? ASN A 5 . ? 1_555 ? 37 BC1 8 VAL A 8 ? VAL A 7 . ? 2_555 ? 38 BC1 8 MSE A 10 ? MSE A 9 . ? 1_555 ? 39 BC1 8 ARG A 11 ? ARG A 10 . ? 2_555 ? 40 BC1 8 ARG A 15 ? ARG A 14 . ? 2_555 ? 41 BC1 8 CYS A 78 ? CYS A 77 . ? 1_555 ? 42 BC1 8 ILE A 79 ? ILE A 78 . ? 1_555 ? 43 BC1 8 HOH Q . ? HOH A 180 . ? 1_555 ? 44 BC2 7 ARG B 68 ? ARG B 67 . ? 2_565 ? 45 BC2 7 ARG B 98 ? ARG B 97 . ? 2_565 ? 46 BC2 7 THR B 132 ? THR B 131 . ? 1_555 ? 47 BC2 7 THR B 133 ? THR B 132 . ? 1_555 ? 48 BC2 7 THR B 135 ? THR B 134 . ? 1_555 ? 49 BC2 7 ARG B 141 ? ARG B 140 . ? 1_555 ? 50 BC2 7 HOH R . ? HOH B 180 . ? 1_555 ? 51 BC3 6 GLU A 102 ? GLU A 101 . ? 1_555 ? 52 BC3 6 ARG A 103 ? ARG A 102 . ? 1_555 ? 53 BC3 6 PRO A 104 ? PRO A 103 . ? 1_555 ? 54 BC3 6 ASP A 105 ? ASP A 104 . ? 1_555 ? 55 BC3 6 HOH Q . ? HOH A 204 . ? 1_555 ? 56 BC3 6 HOH Q . ? HOH A 243 . ? 1_555 ? 57 BC4 8 ARG B 131 ? ARG B 130 . ? 1_555 ? 58 BC4 8 PRO B 145 ? PRO B 144 . ? 1_555 ? 59 BC4 8 ILE B 146 ? ILE B 145 . ? 1_555 ? 60 BC4 8 GLY B 147 ? GLY B 146 . ? 1_555 ? 61 BC4 8 ARG B 148 ? ARG B 147 . ? 1_555 ? 62 BC4 8 HOH R . ? HOH B 175 . ? 1_555 ? 63 BC4 8 HOH R . ? HOH B 199 . ? 1_555 ? 64 BC4 8 HOH R . ? HOH B 201 . ? 2_565 ? 65 BC5 4 ARG B 103 ? ARG B 102 . ? 1_555 ? 66 BC5 4 PRO B 104 ? PRO B 103 . ? 1_555 ? 67 BC5 4 ASP B 105 ? ASP B 104 . ? 1_555 ? 68 BC5 4 HOH R . ? HOH B 217 . ? 1_555 ? # _atom_sites.entry_id 3EF8 _atom_sites.fract_transf_matrix[1][1] 0.016708 _atom_sites.fract_transf_matrix[1][2] 0.009646 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019293 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004210 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 GLU 9 8 8 GLU GLU A . n A 1 10 MSE 10 9 9 MSE MSE A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 ILE 13 12 12 ILE ILE A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 MSE 16 15 15 MSE MSE A . n A 1 17 MSE 17 16 16 MSE MSE A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 TYR 20 19 19 TYR TYR A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 TYR 22 21 21 TYR TYR A . n A 1 23 HIS 23 22 22 HIS HIS A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 ASP 25 24 24 ASP ASP A . n A 1 26 MSE 26 25 25 MSE MSE A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 HIS 28 27 27 HIS HIS A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 GLU 30 29 29 GLU GLU A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 ALA 33 32 32 ALA ALA A . n A 1 34 ALA 34 33 33 ALA ALA A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 PHE 36 35 35 PHE PHE A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 CYS 40 39 39 CYS CYS A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 VAL 42 41 41 VAL VAL A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 TYR 44 43 43 TYR TYR A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 ASN 47 46 46 ASN ASN A . n A 1 48 PHE 48 47 47 PHE PHE A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 ARG 53 52 52 ARG ARG A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 ALA 55 54 54 ALA ALA A . n A 1 56 TYR 56 55 55 TYR TYR A . n A 1 57 LYS 57 56 56 LYS LYS A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 GLU 61 60 60 GLU GLU A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 ILE 63 62 62 ILE ILE A . n A 1 64 GLY 64 63 63 GLY GLY A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 PHE 66 65 65 PHE PHE A . n A 1 67 PHE 67 66 66 PHE PHE A . n A 1 68 ARG 68 67 67 ARG ARG A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 SER 71 70 70 SER SER A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 HIS 73 72 72 HIS HIS A . n A 1 74 ASN 74 73 73 ASN ASN A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 ILE 77 76 76 ILE ILE A . n A 1 78 CYS 78 77 77 CYS CYS A . n A 1 79 ILE 79 78 78 ILE ILE A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 PHE 81 80 80 PHE PHE A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLU 84 83 83 GLU GLU A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 ASN 88 87 87 ASN ASN A . n A 1 89 VAL 89 88 88 VAL VAL A . n A 1 90 ARG 90 89 89 ARG ARG A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 LEU 94 93 93 LEU LEU A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 ILE 96 95 95 ILE ILE A . n A 1 97 HIS 97 96 96 HIS HIS A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 TYR 99 98 98 TYR TYR A . n A 1 100 THR 100 99 99 THR THR A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 GLU 102 101 101 GLU GLU A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 PRO 104 103 103 PRO PRO A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 ILE 107 106 106 ILE ILE A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 TYR 109 108 108 TYR TYR A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 TYR 112 111 111 TYR TYR A . n A 1 113 PHE 113 112 112 PHE PHE A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 VAL 116 115 115 VAL VAL A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 VAL 119 118 118 VAL VAL A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 GLY 121 120 120 GLY GLY A . n A 1 122 GLN 122 121 121 GLN GLN A . n A 1 123 TRP 123 122 122 TRP TRP A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 PHE 125 124 124 PHE PHE A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 ARG 127 126 126 ARG ARG A . n A 1 128 ARG 128 127 127 ARG ARG A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 ARG 131 130 130 ARG ARG A . n A 1 132 THR 132 131 131 THR THR A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 MSE 134 133 133 MSE MSE A . n A 1 135 THR 135 134 134 THR THR A . n A 1 136 THR 136 135 135 THR THR A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 TYR 138 137 137 TYR TYR A . n A 1 139 HIS 139 138 138 HIS HIS A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 ARG 141 140 140 ARG ARG A . n A 1 142 ALA 142 141 141 ALA ALA A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 ASN 144 143 143 ASN ASN A . n A 1 145 PRO 145 144 144 PRO PRO A . n A 1 146 ILE 146 145 145 ILE ILE A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 ARG 148 147 147 ARG ARG A . n A 1 149 ALA 149 148 148 ALA ALA A . n A 1 150 GLU 150 149 149 GLU GLU A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 THR 3 2 2 THR THR B . n B 1 4 ASP 4 3 3 ASP ASP B . n B 1 5 THR 5 4 4 THR THR B . n B 1 6 ASN 6 5 5 ASN ASN B . n B 1 7 LEU 7 6 6 LEU LEU B . n B 1 8 VAL 8 7 7 VAL VAL B . n B 1 9 GLU 9 8 8 GLU GLU B . n B 1 10 MSE 10 9 9 MSE MSE B . n B 1 11 ARG 11 10 10 ARG ARG B . n B 1 12 ALA 12 11 11 ALA ALA B . n B 1 13 ILE 13 12 12 ILE ILE B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 ARG 15 14 14 ARG ARG B . n B 1 16 MSE 16 15 15 MSE MSE B . n B 1 17 MSE 17 16 16 MSE MSE B . n B 1 18 PHE 18 17 17 PHE PHE B . n B 1 19 ASP 19 18 18 ASP ASP B . n B 1 20 TYR 20 19 19 TYR TYR B . n B 1 21 SER 21 20 20 SER SER B . n B 1 22 TYR 22 21 21 TYR TYR B . n B 1 23 HIS 23 22 22 HIS HIS B . n B 1 24 LEU 24 23 23 LEU LEU B . n B 1 25 ASP 25 24 24 ASP ASP B . n B 1 26 MSE 26 25 25 MSE MSE B . n B 1 27 ASN 27 26 26 ASN ASN B . n B 1 28 HIS 28 27 27 HIS HIS B . n B 1 29 PRO 29 28 28 PRO PRO B . n B 1 30 GLU 30 29 29 GLU GLU B . n B 1 31 GLU 31 30 30 GLU GLU B . n B 1 32 LEU 32 31 31 LEU LEU B . n B 1 33 ALA 33 32 32 ALA ALA B . n B 1 34 ALA 34 33 33 ALA ALA B . n B 1 35 LEU 35 34 34 LEU LEU B . n B 1 36 PHE 36 35 35 PHE PHE B . n B 1 37 VAL 37 36 36 VAL VAL B . n B 1 38 GLU 38 37 37 GLU GLU B . n B 1 39 ASP 39 38 38 ASP ASP B . n B 1 40 CYS 40 39 39 CYS CYS B . n B 1 41 GLU 41 40 40 GLU GLU B . n B 1 42 VAL 42 41 41 VAL VAL B . n B 1 43 SER 43 42 42 SER SER B . n B 1 44 TYR 44 43 43 TYR TYR B . n B 1 45 ALA 45 44 44 ALA ALA B . n B 1 46 PRO 46 45 45 PRO PRO B . n B 1 47 ASN 47 46 46 ASN ASN B . n B 1 48 PHE 48 47 47 PHE PHE B . n B 1 49 GLY 49 48 48 GLY GLY B . n B 1 50 ALA 50 49 49 ALA ALA B . n B 1 51 THR 51 50 50 THR THR B . n B 1 52 GLY 52 51 51 GLY GLY B . n B 1 53 ARG 53 52 52 ARG ARG B . n B 1 54 ASP 54 53 53 ASP ASP B . n B 1 55 ALA 55 54 54 ALA ALA B . n B 1 56 TYR 56 55 55 TYR TYR B . n B 1 57 LYS 57 56 56 LYS LYS B . n B 1 58 LYS 58 57 57 LYS LYS B . n B 1 59 THR 59 58 58 THR THR B . n B 1 60 LEU 60 59 59 LEU LEU B . n B 1 61 GLU 61 60 60 GLU GLU B . n B 1 62 GLY 62 61 61 GLY GLY B . n B 1 63 ILE 63 62 62 ILE ILE B . n B 1 64 GLY 64 63 63 GLY GLY B . n B 1 65 THR 65 64 64 THR THR B . n B 1 66 PHE 66 65 65 PHE PHE B . n B 1 67 PHE 67 66 66 PHE PHE B . n B 1 68 ARG 68 67 67 ARG ARG B . n B 1 69 GLY 69 68 68 GLY GLY B . n B 1 70 THR 70 69 69 THR THR B . n B 1 71 SER 71 70 70 SER SER B . n B 1 72 HIS 72 71 71 HIS HIS B . n B 1 73 HIS 73 72 72 HIS HIS B . n B 1 74 ASN 74 73 73 ASN ASN B . n B 1 75 SER 75 74 74 SER SER B . n B 1 76 ASN 76 75 75 ASN ASN B . n B 1 77 ILE 77 76 76 ILE ILE B . n B 1 78 CYS 78 77 77 CYS CYS B . n B 1 79 ILE 79 78 78 ILE ILE B . n B 1 80 ASP 80 79 79 ASP ASP B . n B 1 81 PHE 81 80 80 PHE PHE B . n B 1 82 VAL 82 81 81 VAL VAL B . n B 1 83 SER 83 82 82 SER SER B . n B 1 84 GLU 84 83 83 GLU GLU B . n B 1 85 THR 85 84 84 THR THR B . n B 1 86 GLU 86 85 85 GLU GLU B . n B 1 87 ALA 87 86 86 ALA ALA B . n B 1 88 ASN 88 87 87 ASN ASN B . n B 1 89 VAL 89 88 88 VAL VAL B . n B 1 90 ARG 90 89 89 ARG ARG B . n B 1 91 SER 91 90 90 SER SER B . n B 1 92 VAL 92 91 91 VAL VAL B . n B 1 93 VAL 93 92 92 VAL VAL B . n B 1 94 LEU 94 93 93 LEU LEU B . n B 1 95 ALA 95 94 94 ALA ALA B . n B 1 96 ILE 96 95 95 ILE ILE B . n B 1 97 HIS 97 96 96 HIS HIS B . n B 1 98 ARG 98 97 97 ARG ARG B . n B 1 99 TYR 99 98 98 TYR TYR B . n B 1 100 THR 100 99 99 THR THR B . n B 1 101 LYS 101 100 100 LYS LYS B . n B 1 102 GLU 102 101 101 GLU GLU B . n B 1 103 ARG 103 102 102 ARG ARG B . n B 1 104 PRO 104 103 103 PRO PRO B . n B 1 105 ASP 105 104 104 ASP ASP B . n B 1 106 GLY 106 105 105 GLY GLY B . n B 1 107 ILE 107 106 106 ILE ILE B . n B 1 108 LEU 108 107 107 LEU LEU B . n B 1 109 TYR 109 108 108 TYR TYR B . n B 1 110 GLY 110 109 109 GLY GLY B . n B 1 111 GLN 111 110 110 GLN GLN B . n B 1 112 TYR 112 111 111 TYR TYR B . n B 1 113 PHE 113 112 112 PHE PHE B . n B 1 114 ASP 114 113 113 ASP ASP B . n B 1 115 THR 115 114 114 THR THR B . n B 1 116 VAL 116 115 115 VAL VAL B . n B 1 117 VAL 117 116 116 VAL VAL B . n B 1 118 LYS 118 117 117 LYS LYS B . n B 1 119 VAL 119 118 118 VAL VAL B . n B 1 120 ASP 120 119 119 ASP ASP B . n B 1 121 GLY 121 120 120 GLY GLY B . n B 1 122 GLN 122 121 121 GLN GLN B . n B 1 123 TRP 123 122 122 TRP TRP B . n B 1 124 LYS 124 123 123 LYS LYS B . n B 1 125 PHE 125 124 124 PHE PHE B . n B 1 126 LYS 126 125 125 LYS LYS B . n B 1 127 ARG 127 126 126 ARG ARG B . n B 1 128 ARG 128 127 127 ARG ARG B . n B 1 129 GLU 129 128 128 GLU GLU B . n B 1 130 LEU 130 129 129 LEU LEU B . n B 1 131 ARG 131 130 130 ARG ARG B . n B 1 132 THR 132 131 131 THR THR B . n B 1 133 THR 133 132 132 THR THR B . n B 1 134 MSE 134 133 133 MSE MSE B . n B 1 135 THR 135 134 134 THR THR B . n B 1 136 THR 136 135 135 THR THR B . n B 1 137 ASP 137 136 136 ASP ASP B . n B 1 138 TYR 138 137 137 TYR TYR B . n B 1 139 HIS 139 138 138 HIS HIS B . n B 1 140 VAL 140 139 139 VAL VAL B . n B 1 141 ARG 141 140 140 ARG ARG B . n B 1 142 ALA 142 141 141 ALA ALA B . n B 1 143 ALA 143 142 142 ALA ALA B . n B 1 144 ASN 144 143 143 ASN ASN B . n B 1 145 PRO 145 144 144 PRO PRO B . n B 1 146 ILE 146 145 145 ILE ILE B . n B 1 147 GLY 147 146 146 GLY GLY B . n B 1 148 ARG 148 147 147 ARG ARG B . n B 1 149 ALA 149 148 148 ALA ALA B . n B 1 150 GLU 150 149 149 GLU GLU B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 150 1 MG MG A . D 3 PEG 1 151 2 PEG PEG A . E 3 PEG 1 152 3 PEG PEG A . F 3 PEG 1 153 4 PEG PEG A . G 4 PGE 1 154 7 PGE PGE A . H 4 PGE 1 155 8 PGE PGE A . I 4 PGE 1 156 9 PGE PGE A . J 4 PGE 1 157 10 PGE PGE A . K 5 PG4 1 158 12 PG4 PG4 A . L 3 PEG 1 150 5 PEG PEG B . M 3 PEG 1 151 6 PEG PEG B . N 5 PG4 1 152 11 PG4 PG4 B . O 5 PG4 1 153 13 PG4 PG4 B . P 5 PG4 1 154 14 PG4 PG4 B . Q 6 HOH 1 159 15 HOH HOH A . Q 6 HOH 2 160 17 HOH HOH A . Q 6 HOH 3 161 19 HOH HOH A . Q 6 HOH 4 162 20 HOH HOH A . Q 6 HOH 5 163 22 HOH HOH A . Q 6 HOH 6 164 24 HOH HOH A . Q 6 HOH 7 165 25 HOH HOH A . Q 6 HOH 8 166 27 HOH HOH A . Q 6 HOH 9 167 32 HOH HOH A . Q 6 HOH 10 168 34 HOH HOH A . Q 6 HOH 11 169 36 HOH HOH A . Q 6 HOH 12 170 37 HOH HOH A . Q 6 HOH 13 171 38 HOH HOH A . Q 6 HOH 14 172 40 HOH HOH A . Q 6 HOH 15 173 45 HOH HOH A . Q 6 HOH 16 174 47 HOH HOH A . Q 6 HOH 17 175 49 HOH HOH A . Q 6 HOH 18 176 52 HOH HOH A . Q 6 HOH 19 177 53 HOH HOH A . Q 6 HOH 20 178 54 HOH HOH A . Q 6 HOH 21 179 55 HOH HOH A . Q 6 HOH 22 180 56 HOH HOH A . Q 6 HOH 23 181 60 HOH HOH A . Q 6 HOH 24 182 61 HOH HOH A . Q 6 HOH 25 183 62 HOH HOH A . Q 6 HOH 26 184 63 HOH HOH A . Q 6 HOH 27 185 65 HOH HOH A . Q 6 HOH 28 186 66 HOH HOH A . Q 6 HOH 29 187 68 HOH HOH A . Q 6 HOH 30 188 72 HOH HOH A . Q 6 HOH 31 189 73 HOH HOH A . Q 6 HOH 32 190 74 HOH HOH A . Q 6 HOH 33 191 77 HOH HOH A . Q 6 HOH 34 192 79 HOH HOH A . Q 6 HOH 35 193 81 HOH HOH A . Q 6 HOH 36 194 82 HOH HOH A . Q 6 HOH 37 195 83 HOH HOH A . Q 6 HOH 38 196 84 HOH HOH A . Q 6 HOH 39 197 85 HOH HOH A . Q 6 HOH 40 198 86 HOH HOH A . Q 6 HOH 41 199 87 HOH HOH A . Q 6 HOH 42 200 89 HOH HOH A . Q 6 HOH 43 201 90 HOH HOH A . Q 6 HOH 44 202 99 HOH HOH A . Q 6 HOH 45 203 100 HOH HOH A . Q 6 HOH 46 204 103 HOH HOH A . Q 6 HOH 47 205 105 HOH HOH A . Q 6 HOH 48 206 107 HOH HOH A . Q 6 HOH 49 207 108 HOH HOH A . Q 6 HOH 50 208 112 HOH HOH A . Q 6 HOH 51 209 115 HOH HOH A . Q 6 HOH 52 210 116 HOH HOH A . Q 6 HOH 53 211 118 HOH HOH A . Q 6 HOH 54 212 119 HOH HOH A . Q 6 HOH 55 213 120 HOH HOH A . Q 6 HOH 56 214 121 HOH HOH A . Q 6 HOH 57 215 123 HOH HOH A . Q 6 HOH 58 216 124 HOH HOH A . Q 6 HOH 59 217 125 HOH HOH A . Q 6 HOH 60 218 127 HOH HOH A . Q 6 HOH 61 219 128 HOH HOH A . Q 6 HOH 62 220 131 HOH HOH A . Q 6 HOH 63 221 132 HOH HOH A . Q 6 HOH 64 222 133 HOH HOH A . Q 6 HOH 65 223 135 HOH HOH A . Q 6 HOH 66 224 137 HOH HOH A . Q 6 HOH 67 225 138 HOH HOH A . Q 6 HOH 68 226 139 HOH HOH A . Q 6 HOH 69 227 142 HOH HOH A . Q 6 HOH 70 228 144 HOH HOH A . Q 6 HOH 71 229 146 HOH HOH A . Q 6 HOH 72 230 148 HOH HOH A . Q 6 HOH 73 231 149 HOH HOH A . Q 6 HOH 74 232 152 HOH HOH A . Q 6 HOH 75 233 153 HOH HOH A . Q 6 HOH 76 234 154 HOH HOH A . Q 6 HOH 77 235 155 HOH HOH A . Q 6 HOH 78 236 157 HOH HOH A . Q 6 HOH 79 237 158 HOH HOH A . Q 6 HOH 80 238 159 HOH HOH A . Q 6 HOH 81 239 160 HOH HOH A . Q 6 HOH 82 240 162 HOH HOH A . Q 6 HOH 83 241 164 HOH HOH A . Q 6 HOH 84 242 165 HOH HOH A . Q 6 HOH 85 243 166 HOH HOH A . Q 6 HOH 86 244 168 HOH HOH A . Q 6 HOH 87 245 169 HOH HOH A . Q 6 HOH 88 246 170 HOH HOH A . Q 6 HOH 89 247 171 HOH HOH A . Q 6 HOH 90 248 174 HOH HOH A . Q 6 HOH 91 249 179 HOH HOH A . Q 6 HOH 92 250 180 HOH HOH A . Q 6 HOH 93 251 185 HOH HOH A . Q 6 HOH 94 252 186 HOH HOH A . Q 6 HOH 95 253 187 HOH HOH A . Q 6 HOH 96 254 192 HOH HOH A . Q 6 HOH 97 255 194 HOH HOH A . Q 6 HOH 98 256 195 HOH HOH A . Q 6 HOH 99 257 199 HOH HOH A . Q 6 HOH 100 258 203 HOH HOH A . Q 6 HOH 101 259 204 HOH HOH A . Q 6 HOH 102 260 206 HOH HOH A . Q 6 HOH 103 261 211 HOH HOH A . Q 6 HOH 104 262 212 HOH HOH A . Q 6 HOH 105 263 214 HOH HOH A . Q 6 HOH 106 264 217 HOH HOH A . Q 6 HOH 107 265 221 HOH HOH A . Q 6 HOH 108 266 223 HOH HOH A . Q 6 HOH 109 267 224 HOH HOH A . Q 6 HOH 110 268 226 HOH HOH A . Q 6 HOH 111 269 230 HOH HOH A . Q 6 HOH 112 270 232 HOH HOH A . Q 6 HOH 113 271 236 HOH HOH A . Q 6 HOH 114 272 237 HOH HOH A . Q 6 HOH 115 273 238 HOH HOH A . Q 6 HOH 116 274 239 HOH HOH A . Q 6 HOH 117 275 240 HOH HOH A . Q 6 HOH 118 276 241 HOH HOH A . Q 6 HOH 119 277 243 HOH HOH A . Q 6 HOH 120 278 244 HOH HOH A . Q 6 HOH 121 279 246 HOH HOH A . R 6 HOH 1 155 16 HOH HOH B . R 6 HOH 2 156 18 HOH HOH B . R 6 HOH 3 157 21 HOH HOH B . R 6 HOH 4 158 23 HOH HOH B . R 6 HOH 5 159 26 HOH HOH B . R 6 HOH 6 160 28 HOH HOH B . R 6 HOH 7 161 29 HOH HOH B . R 6 HOH 8 162 30 HOH HOH B . R 6 HOH 9 163 31 HOH HOH B . R 6 HOH 10 164 33 HOH HOH B . R 6 HOH 11 165 35 HOH HOH B . R 6 HOH 12 166 39 HOH HOH B . R 6 HOH 13 167 41 HOH HOH B . R 6 HOH 14 168 42 HOH HOH B . R 6 HOH 15 169 43 HOH HOH B . R 6 HOH 16 170 44 HOH HOH B . R 6 HOH 17 171 46 HOH HOH B . R 6 HOH 18 172 48 HOH HOH B . R 6 HOH 19 173 50 HOH HOH B . R 6 HOH 20 174 51 HOH HOH B . R 6 HOH 21 175 57 HOH HOH B . R 6 HOH 22 176 58 HOH HOH B . R 6 HOH 23 177 59 HOH HOH B . R 6 HOH 24 178 64 HOH HOH B . R 6 HOH 25 179 67 HOH HOH B . R 6 HOH 26 180 69 HOH HOH B . R 6 HOH 27 181 70 HOH HOH B . R 6 HOH 28 182 71 HOH HOH B . R 6 HOH 29 183 75 HOH HOH B . R 6 HOH 30 184 76 HOH HOH B . R 6 HOH 31 185 78 HOH HOH B . R 6 HOH 32 186 80 HOH HOH B . R 6 HOH 33 187 88 HOH HOH B . R 6 HOH 34 188 91 HOH HOH B . R 6 HOH 35 189 92 HOH HOH B . R 6 HOH 36 190 93 HOH HOH B . R 6 HOH 37 191 94 HOH HOH B . R 6 HOH 38 192 95 HOH HOH B . R 6 HOH 39 193 96 HOH HOH B . R 6 HOH 40 194 97 HOH HOH B . R 6 HOH 41 195 98 HOH HOH B . R 6 HOH 42 196 101 HOH HOH B . R 6 HOH 43 197 102 HOH HOH B . R 6 HOH 44 198 104 HOH HOH B . R 6 HOH 45 199 106 HOH HOH B . R 6 HOH 46 200 109 HOH HOH B . R 6 HOH 47 201 110 HOH HOH B . R 6 HOH 48 202 111 HOH HOH B . R 6 HOH 49 203 113 HOH HOH B . R 6 HOH 50 204 114 HOH HOH B . R 6 HOH 51 205 117 HOH HOH B . R 6 HOH 52 206 122 HOH HOH B . R 6 HOH 53 207 126 HOH HOH B . R 6 HOH 54 208 129 HOH HOH B . R 6 HOH 55 209 130 HOH HOH B . R 6 HOH 56 210 134 HOH HOH B . R 6 HOH 57 211 136 HOH HOH B . R 6 HOH 58 212 140 HOH HOH B . R 6 HOH 59 213 141 HOH HOH B . R 6 HOH 60 214 143 HOH HOH B . R 6 HOH 61 215 145 HOH HOH B . R 6 HOH 62 216 147 HOH HOH B . R 6 HOH 63 217 150 HOH HOH B . R 6 HOH 64 218 151 HOH HOH B . R 6 HOH 65 219 156 HOH HOH B . R 6 HOH 66 220 161 HOH HOH B . R 6 HOH 67 221 163 HOH HOH B . R 6 HOH 68 222 167 HOH HOH B . R 6 HOH 69 223 172 HOH HOH B . R 6 HOH 70 224 173 HOH HOH B . R 6 HOH 71 225 175 HOH HOH B . R 6 HOH 72 226 176 HOH HOH B . R 6 HOH 73 227 177 HOH HOH B . R 6 HOH 74 228 178 HOH HOH B . R 6 HOH 75 229 181 HOH HOH B . R 6 HOH 76 230 182 HOH HOH B . R 6 HOH 77 231 183 HOH HOH B . R 6 HOH 78 232 184 HOH HOH B . R 6 HOH 79 233 188 HOH HOH B . R 6 HOH 80 234 189 HOH HOH B . R 6 HOH 81 235 190 HOH HOH B . R 6 HOH 82 236 191 HOH HOH B . R 6 HOH 83 237 193 HOH HOH B . R 6 HOH 84 238 196 HOH HOH B . R 6 HOH 85 239 197 HOH HOH B . R 6 HOH 86 240 198 HOH HOH B . R 6 HOH 87 241 200 HOH HOH B . R 6 HOH 88 242 201 HOH HOH B . R 6 HOH 89 243 202 HOH HOH B . R 6 HOH 90 244 205 HOH HOH B . R 6 HOH 91 245 207 HOH HOH B . R 6 HOH 92 246 208 HOH HOH B . R 6 HOH 93 247 209 HOH HOH B . R 6 HOH 94 248 210 HOH HOH B . R 6 HOH 95 249 213 HOH HOH B . R 6 HOH 96 250 215 HOH HOH B . R 6 HOH 97 251 216 HOH HOH B . R 6 HOH 98 252 218 HOH HOH B . R 6 HOH 99 253 219 HOH HOH B . R 6 HOH 100 254 220 HOH HOH B . R 6 HOH 101 255 222 HOH HOH B . R 6 HOH 102 256 225 HOH HOH B . R 6 HOH 103 257 227 HOH HOH B . R 6 HOH 104 258 228 HOH HOH B . R 6 HOH 105 259 229 HOH HOH B . R 6 HOH 106 260 231 HOH HOH B . R 6 HOH 107 261 233 HOH HOH B . R 6 HOH 108 262 234 HOH HOH B . R 6 HOH 109 263 235 HOH HOH B . R 6 HOH 110 264 242 HOH HOH B . R 6 HOH 111 265 245 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 10 A MSE 9 ? MET SELENOMETHIONINE 3 A MSE 16 A MSE 15 ? MET SELENOMETHIONINE 4 A MSE 17 A MSE 16 ? MET SELENOMETHIONINE 5 A MSE 26 A MSE 25 ? MET SELENOMETHIONINE 6 A MSE 134 A MSE 133 ? MET SELENOMETHIONINE 7 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 8 B MSE 10 B MSE 9 ? MET SELENOMETHIONINE 9 B MSE 16 B MSE 15 ? MET SELENOMETHIONINE 10 B MSE 17 B MSE 16 ? MET SELENOMETHIONINE 11 B MSE 26 B MSE 25 ? MET SELENOMETHIONINE 12 B MSE 134 B MSE 133 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3 A,C,D,E,F,G,H,I,J,K,Q 2 1,4,5 B,L,M,N,O,P,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6590 ? 1 MORE -17 ? 1 'SSA (A^2)' 18830 ? 2 'ABSA (A^2)' 6700 ? 2 MORE -16 ? 2 'SSA (A^2)' 18650 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 -29.9255000000 0.8660254038 -0.5000000000 0.0000000000 51.8324864419 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5000000000 0.8660254038 0.0000000000 -59.8510000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A MG 150 ? C MG . 2 1 A HOH 277 ? Q HOH . 3 1 A HOH 278 ? Q HOH . 4 1 A HOH 279 ? Q HOH . 5 1 B HOH 265 ? R HOH . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id Q _pdbx_struct_conn_angle.ptnr1_label_comp_id HOH _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr1_auth_seq_id 196 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 150 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id Q _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 220 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 90.7 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-09-13 4 'Structure model' 1 3 2017-10-25 5 'Structure model' 1 4 2019-07-24 6 'Structure model' 1 5 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Author supporting evidence' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 3 'Structure model' struct 3 3 'Structure model' struct_keywords 4 4 'Structure model' pdbx_struct_assembly_auth_evidence 5 5 'Structure model' pdbx_struct_special_symmetry 6 5 'Structure model' software 7 5 'Structure model' struct_conn 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_struct_conn_angle 10 6 'Structure model' struct_conn 11 6 'Structure model' struct_ref_seq_dif 12 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 3 'Structure model' '_struct.title' 4 3 'Structure model' '_struct_keywords.text' 5 5 'Structure model' '_software.classification' 6 5 'Structure model' '_software.contact_author' 7 5 'Structure model' '_software.contact_author_email' 8 5 'Structure model' '_software.language' 9 5 'Structure model' '_software.location' 10 5 'Structure model' '_software.name' 11 5 'Structure model' '_software.type' 12 5 'Structure model' '_software.version' 13 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 6 'Structure model' '_database_2.pdbx_DOI' 15 6 'Structure model' '_database_2.pdbx_database_accession' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 6 'Structure model' '_struct_conn.pdbx_dist_value' 19 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 6 'Structure model' '_struct_ref_seq_dif.details' 21 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.4.0067 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3EF8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 116.15 120.30 -4.15 0.50 N 2 1 NE B ARG 97 ? ? CZ B ARG 97 ? ? NH1 B ARG 97 ? ? 125.14 120.30 4.84 0.50 N 3 1 NE B ARG 97 ? ? CZ B ARG 97 ? ? NH2 B ARG 97 ? ? 116.22 120.30 -4.08 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 27 ? ? -116.47 74.76 2 1 ASP A 38 ? A -94.64 46.34 3 1 HIS B 27 ? ? -113.53 71.80 4 1 ASP B 38 ? ? -100.40 54.64 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? SE ? A MSE 2 SE 2 1 Y 1 A MSE 1 ? CE ? A MSE 2 CE 3 1 Y 1 A THR 2 ? OG1 ? A THR 3 OG1 4 1 Y 1 A THR 2 ? CG2 ? A THR 3 CG2 5 1 Y 1 A ASP 3 ? CG ? A ASP 4 CG 6 1 Y 1 A ASP 3 ? OD1 ? A ASP 4 OD1 7 1 Y 1 A ASP 3 ? OD2 ? A ASP 4 OD2 8 1 Y 1 A ASN 46 ? CG ? A ASN 47 CG 9 1 Y 1 A ASN 46 ? OD1 ? A ASN 47 OD1 10 1 Y 1 A ASN 46 ? ND2 ? A ASN 47 ND2 11 1 Y 1 A LYS 57 ? CD ? A LYS 58 CD 12 1 Y 1 A LYS 57 ? CE ? A LYS 58 CE 13 1 Y 1 A LYS 57 ? NZ ? A LYS 58 NZ 14 1 Y 1 A GLU 60 ? CG ? A GLU 61 CG 15 1 Y 1 A GLU 60 ? CD ? A GLU 61 CD 16 1 Y 1 A GLU 60 ? OE1 ? A GLU 61 OE1 17 1 Y 1 A GLU 60 ? OE2 ? A GLU 61 OE2 18 1 Y 1 A PHE 65 ? CD1 ? A PHE 66 CD1 19 1 Y 1 A PHE 65 ? CD2 ? A PHE 66 CD2 20 1 Y 1 A PHE 65 ? CE1 ? A PHE 66 CE1 21 1 Y 1 A PHE 65 ? CE2 ? A PHE 66 CE2 22 1 Y 1 A PHE 65 ? CZ ? A PHE 66 CZ 23 1 Y 1 A GLU 101 ? CD ? A GLU 102 CD 24 1 Y 1 A GLU 101 ? OE1 ? A GLU 102 OE1 25 1 Y 1 A GLU 101 ? OE2 ? A GLU 102 OE2 26 1 Y 1 A ARG 140 ? CD ? A ARG 141 CD 27 1 Y 1 A ARG 140 ? NE ? A ARG 141 NE 28 1 Y 1 A ARG 140 ? CZ ? A ARG 141 CZ 29 1 Y 1 A ARG 140 ? NH1 ? A ARG 141 NH1 30 1 Y 1 A ARG 140 ? NH2 ? A ARG 141 NH2 31 1 Y 1 A GLU 149 ? CG ? A GLU 150 CG 32 1 Y 1 A GLU 149 ? CD ? A GLU 150 CD 33 1 Y 1 A GLU 149 ? OE1 ? A GLU 150 OE1 34 1 Y 1 A GLU 149 ? OE2 ? A GLU 150 OE2 35 1 Y 1 B MSE 1 ? CG ? B MSE 2 CG 36 1 Y 1 B MSE 1 ? SE ? B MSE 2 SE 37 1 Y 1 B MSE 1 ? CE ? B MSE 2 CE 38 1 Y 1 B ASP 3 ? CG ? B ASP 4 CG 39 1 Y 1 B ASP 3 ? OD1 ? B ASP 4 OD1 40 1 Y 1 B ASP 3 ? OD2 ? B ASP 4 OD2 41 1 Y 1 B ASN 46 ? CG ? B ASN 47 CG 42 1 Y 1 B ASN 46 ? OD1 ? B ASN 47 OD1 43 1 Y 1 B ASN 46 ? ND2 ? B ASN 47 ND2 44 1 Y 1 B LYS 57 ? CD ? B LYS 58 CD 45 1 Y 1 B LYS 57 ? CE ? B LYS 58 CE 46 1 Y 1 B LYS 57 ? NZ ? B LYS 58 NZ 47 1 Y 1 B GLU 60 ? CG ? B GLU 61 CG 48 1 Y 1 B GLU 60 ? CD ? B GLU 61 CD 49 1 Y 1 B GLU 60 ? OE1 ? B GLU 61 OE1 50 1 Y 1 B GLU 60 ? OE2 ? B GLU 61 OE2 51 1 Y 1 B PHE 65 ? CD1 ? B PHE 66 CD1 52 1 Y 1 B PHE 65 ? CD2 ? B PHE 66 CD2 53 1 Y 1 B PHE 65 ? CE1 ? B PHE 66 CE1 54 1 Y 1 B PHE 65 ? CE2 ? B PHE 66 CE2 55 1 Y 1 B PHE 65 ? CZ ? B PHE 66 CZ 56 1 Y 1 B GLU 101 ? CG ? B GLU 102 CG 57 1 Y 1 B GLU 101 ? CD ? B GLU 102 CD 58 1 Y 1 B GLU 101 ? OE1 ? B GLU 102 OE1 59 1 Y 1 B GLU 101 ? OE2 ? B GLU 102 OE2 60 1 Y 1 B LYS 125 ? CE ? B LYS 126 CE 61 1 Y 1 B LYS 125 ? NZ ? B LYS 126 NZ 62 1 Y 1 B ARG 140 ? CZ ? B ARG 141 CZ 63 1 Y 1 B ARG 140 ? NH1 ? B ARG 141 NH1 64 1 Y 1 B ARG 140 ? NH2 ? B ARG 141 NH2 65 1 Y 1 B GLU 149 ? CD ? B GLU 150 CD 66 1 Y 1 B GLU 149 ? OE1 ? B GLU 150 OE1 67 1 Y 1 B GLU 149 ? OE2 ? B GLU 150 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'TRIETHYLENE GLYCOL' PGE 5 'TETRAETHYLENE GLYCOL' PG4 6 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? 3 2 'gel filtration' ? 4 2 'light scattering' ? #