HEADER CELL CYCLE 10-SEP-08 3EFY TITLE STRUCTURE OF THE CYCLOMODULIN CIF FROM PATHOGENIC ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: CIF (CELL CYCLE INHIBITING FACTOR); COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 100-282; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: CIF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CIF, CELL CYCLE, BACTERIA, VIRULENCE FACTOR, TYPE III SECRETION, E. KEYWDS 2 COLI, PLASMID EXPDTA X-RAY DIFFRACTION AUTHOR C.E.STEBBINS,Y.HSU REVDAT 4 21-FEB-24 3EFY 1 SEQADV REVDAT 3 09-JUN-09 3EFY 1 JRNL REVDAT 2 24-FEB-09 3EFY 1 VERSN REVDAT 1 28-OCT-08 3EFY 0 JRNL AUTH Y.HSU,G.JUBELIN,F.TAIEB,J.P.NOUGAYREDE,E.OSWALD,C.E.STEBBINS JRNL TITL STRUCTURE OF THE CYCLOMODULIN CIF FROM PATHOGENIC JRNL TITL 2 ESCHERICHIA COLI. JRNL REF J.MOL.BIOL. V. 384 465 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18845161 JRNL DOI 10.1016/J.JMB.2008.09.051 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 70675 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3755 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5219 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 264 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2916 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 751 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.088 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.555 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2969 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2021 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3999 ; 1.639 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4944 ; 0.952 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 363 ; 6.084 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 151 ;35.081 ;25.563 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 543 ;13.096 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.775 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 439 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3305 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 586 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 637 ; 0.245 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.020 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.259 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 51 ; 0.298 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 53 ; 0.304 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1815 ; 1.174 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 742 ; 0.312 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2920 ; 2.239 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1154 ; 3.300 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1079 ; 5.279 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EFY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049274. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 3.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74589 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.85M SODIUM MALONATE, 0.1M TRI-SODIUM REMARK 280 CITRATE DIHYDRATE, PH 3.8, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.75900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.75900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.75900 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.75900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 370 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 532 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 450 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 504 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 100 REMARK 465 GLU A 101 REMARK 465 LYS A 102 REMARK 465 GLY A 103 REMARK 465 ILE A 104 REMARK 465 VAL A 105 REMARK 465 GLU A 106 REMARK 465 HIS A 290 REMARK 465 HIS A 291 REMARK 465 HIS A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 ARG B 100 REMARK 465 GLU B 101 REMARK 465 LYS B 102 REMARK 465 GLY B 103 REMARK 465 ILE B 104 REMARK 465 VAL B 105 REMARK 465 GLU B 106 REMARK 465 HIS B 289 REMARK 465 HIS B 290 REMARK 465 HIS B 291 REMARK 465 HIS B 292 REMARK 465 HIS B 293 REMARK 465 HIS B 294 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SD MET B 148 O HOH B 727 2.14 REMARK 500 O HOH B 518 O HOH B 720 2.15 REMARK 500 O HOH B 597 O HOH B 734 2.15 REMARK 500 O HOH B 628 O HOH B 689 2.16 REMARK 500 O HOH A 439 O HOH A 487 2.17 REMARK 500 O HOH B 703 O HOH B 736 2.17 REMARK 500 O HOH A 302 O HOH A 544 2.17 REMARK 500 O HOH B 528 O HOH B 603 2.18 REMARK 500 OE1 GLU B 288 O HOH B 735 2.18 REMARK 500 O HOH B 625 O HOH B 709 2.18 REMARK 500 O HOH A 467 O HOH A 581 2.18 REMARK 500 OD1 ASP A 266 O HOH A 469 2.19 REMARK 500 O HOH A 359 O HOH A 413 2.19 REMARK 500 O HOH A 650 O HOH B 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 463 O HOH A 637 2655 2.06 REMARK 500 O HOH A 451 O HOH A 637 2655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS B 165 N - CA - CB ANGL. DEV. = -13.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 204 -104.11 -131.25 REMARK 500 GLN A 251 64.72 -118.57 REMARK 500 HIS B 204 -101.17 -128.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 3EFY A 100 282 UNP Q7WRZ5 Q7WRZ5_ECOLX 100 282 DBREF 3EFY B 100 282 UNP Q7WRZ5 Q7WRZ5_ECOLX 100 282 SEQADV 3EFY GLY A 283 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY ALA A 284 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY ALA A 285 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY ALA A 286 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY LEU A 287 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY GLU A 288 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS A 289 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS A 290 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS A 291 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS A 292 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS A 293 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS A 294 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY GLY B 283 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY ALA B 284 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY ALA B 285 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY ALA B 286 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY LEU B 287 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY GLU B 288 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS B 289 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS B 290 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS B 291 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS B 292 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS B 293 UNP Q7WRZ5 EXPRESSION TAG SEQADV 3EFY HIS B 294 UNP Q7WRZ5 EXPRESSION TAG SEQRES 1 A 195 ARG GLU LYS GLY ILE VAL GLU PRO SER CYS GLY VAL THR SEQRES 2 A 195 ALA ASN ALA ILE MET LYS LEU PHE LEU ASP LYS ASP GLY SEQRES 3 A 195 PHE SER TYR CYS PHE GLU ASN GLU GLN THR LEU SER LEU SEQRES 4 A 195 GLU GLN LEU GLN GLU ARG LEU SER CYS MET PRO GLU CYS SEQRES 5 A 195 LYS SER PHE VAL LEU ARG VAL ASN ASP GLY ALA LEU GLY SEQRES 6 A 195 HIS ALA TYR ILE VAL ASP ILE PRO LYS GLY GLU ASN SER SEQRES 7 A 195 CYS ARG PRO ALA PHE LEU TYR GLN SER ASP LEU GLY GLU SEQRES 8 A 195 GLY VAL THR ARG LYS LEU ARG PHE GLU ASP TRP MET THR SEQRES 9 A 195 HIS LYS ALA LEU THR PRO ILE LEU LEU ASP ASP ILE CYS SEQRES 10 A 195 ASN TYR PHE SER CYS MET SER GLN ASN LYS THR ASP LEU SEQRES 11 A 195 GLU GLN ILE ALA THR LEU PHE ASP ILE ASP GLY ASN VAL SEQRES 12 A 195 LYS MET LEU ARG LYS GLU ASN ILE GLN TYR GLN LYS HIS SEQRES 13 A 195 ASP ASN PHE SER PHE GLN LEU PHE GLU TYR ASP THR ASP SEQRES 14 A 195 ASN ILE GLU LYS ASN ILE GLU ILE ILE LYS SER LEU CYS SEQRES 15 A 195 SER GLY ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 195 ARG GLU LYS GLY ILE VAL GLU PRO SER CYS GLY VAL THR SEQRES 2 B 195 ALA ASN ALA ILE MET LYS LEU PHE LEU ASP LYS ASP GLY SEQRES 3 B 195 PHE SER TYR CYS PHE GLU ASN GLU GLN THR LEU SER LEU SEQRES 4 B 195 GLU GLN LEU GLN GLU ARG LEU SER CYS MET PRO GLU CYS SEQRES 5 B 195 LYS SER PHE VAL LEU ARG VAL ASN ASP GLY ALA LEU GLY SEQRES 6 B 195 HIS ALA TYR ILE VAL ASP ILE PRO LYS GLY GLU ASN SER SEQRES 7 B 195 CYS ARG PRO ALA PHE LEU TYR GLN SER ASP LEU GLY GLU SEQRES 8 B 195 GLY VAL THR ARG LYS LEU ARG PHE GLU ASP TRP MET THR SEQRES 9 B 195 HIS LYS ALA LEU THR PRO ILE LEU LEU ASP ASP ILE CYS SEQRES 10 B 195 ASN TYR PHE SER CYS MET SER GLN ASN LYS THR ASP LEU SEQRES 11 B 195 GLU GLN ILE ALA THR LEU PHE ASP ILE ASP GLY ASN VAL SEQRES 12 B 195 LYS MET LEU ARG LYS GLU ASN ILE GLN TYR GLN LYS HIS SEQRES 13 B 195 ASP ASN PHE SER PHE GLN LEU PHE GLU TYR ASP THR ASP SEQRES 14 B 195 ASN ILE GLU LYS ASN ILE GLU ILE ILE LYS SER LEU CYS SEQRES 15 B 195 SER GLY ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *751(H2 O) HELIX 1 1 SER A 108 ASP A 122 1 15 HELIX 2 2 CYS A 129 GLU A 133 5 5 HELIX 3 3 SER A 137 CYS A 147 1 11 HELIX 4 4 ARG A 197 THR A 203 1 7 HELIX 5 5 HIS A 204 THR A 208 5 5 HELIX 6 6 LEU A 212 GLN A 224 1 13 HELIX 7 7 ASP A 228 ASP A 237 1 10 HELIX 8 8 ASN A 241 LEU A 245 5 5 HELIX 9 9 ARG A 246 ILE A 250 5 5 HELIX 10 10 ASP A 266 ALA A 284 1 19 HELIX 11 11 ALA A 285 GLU A 288 5 4 HELIX 12 12 SER B 108 ASP B 122 1 15 HELIX 13 13 CYS B 129 GLU B 133 5 5 HELIX 14 14 SER B 137 CYS B 147 1 11 HELIX 15 15 ARG B 197 HIS B 204 1 8 HELIX 16 16 LYS B 205 THR B 208 5 4 HELIX 17 17 LEU B 212 GLN B 224 1 13 HELIX 18 18 ASP B 228 ASP B 237 1 10 HELIX 19 19 ASN B 241 LEU B 245 5 5 HELIX 20 20 ARG B 246 ILE B 250 5 5 HELIX 21 21 ASP B 266 LEU B 287 1 22 SHEET 1 A 5 ILE A 210 LEU A 211 0 SHEET 2 A 5 PRO A 180 TYR A 184 -1 N ALA A 181 O ILE A 210 SHEET 3 A 5 HIS A 165 ILE A 171 -1 N ASP A 170 O PHE A 182 SHEET 4 A 5 SER A 153 ASP A 160 -1 N PHE A 154 O ILE A 171 SHEET 5 A 5 PHE A 258 TYR A 265 -1 O GLN A 261 N ARG A 157 SHEET 1 B 5 ILE B 210 LEU B 211 0 SHEET 2 B 5 PRO B 180 TYR B 184 -1 N ALA B 181 O ILE B 210 SHEET 3 B 5 HIS B 165 ILE B 171 -1 N ASP B 170 O PHE B 182 SHEET 4 B 5 SER B 153 ASP B 160 -1 N VAL B 158 O TYR B 167 SHEET 5 B 5 PHE B 258 TYR B 265 -1 O GLN B 261 N ARG B 157 CRYST1 111.768 111.768 107.518 90.00 90.00 90.00 P 42 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008947 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008947 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009301 0.00000