data_3EG1 # _entry.id 3EG1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EG1 pdb_00003eg1 10.2210/pdb3eg1/pdb RCSB RCSB049277 ? ? WWPDB D_1000049277 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2O88 ;Crystal structure of the N114A mutant of ABL-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions ; unspecified PDB 1BBZ ;CRYSTAL STRUCTURE OF THE ABL-SH3 DOMAIN COMPLEXED WITH A DESIGNED HIGH-AFFINITY PEPTIDE LIGAND: IMPLICATIONS FOR SH3-LIGAND INTERACTIONS ; unspecified PDB 3EG0 . unspecified PDB 3EG2 . unspecified PDB 3EG3 . unspecified # _pdbx_database_status.entry_id 3EG1 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-09-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Camara-Artigas, A.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Role of interfacial water molecules in proline-rich ligand recognition by the Src homology 3 domain of Abl.' J.Biol.Chem. 285 2823 2833 2010 JBCHA3 US 0021-9258 0071 ? 19906645 10.1074/jbc.M109.048033 1 ;Crystallization by capillary counter-diffusion and structure determination of the N114A mutant of the SH3 domain of Abl tyrosine kinase complexed with a high-affinity peptide ligand ; 'Acta Crystallogr.,Sect.D' 63 646 652 2007 ABCRE6 DK 0907-4449 0766 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Palencia, A.' 1 ? primary 'Camara-Artigas, A.' 2 ? primary 'Pisabarro, M.T.' 3 ? primary 'Martinez, J.C.' 4 ? primary 'Luque, I.' 5 ? 1 'Camara-Artigas, A.' 6 ? 1 'Palencia, A.' 7 ? 1 'Martinez, J.C.' 8 ? 1 'Luque, I.' 9 ? 1 'Gavira, J.A.' 10 ? 1 'Garcia-Ruiz, J.M.' 11 ? # _cell.length_a 45.996 _cell.length_b 47.636 _cell.length_c 55.662 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3EG1 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3EG1 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Proto-oncogene tyrosine-protein kinase ABL1' 7023.720 2 2.7.10.2 N114Q 'SH3 DOMAIN, RESIDUES 60-121' ? 2 polymer syn 'p41 peptide' 1035.149 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 54 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'p150, c- ABL, Abelson murine leukemia viral oncogene homolog 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSQYITPVNS MENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSQYITPVNS A,B ? 2 'polypeptide(L)' no yes '(ACE)APSYSPPPPP' XAPSYSPPPPP C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ASN n 1 4 ASP n 1 5 PRO n 1 6 ASN n 1 7 LEU n 1 8 PHE n 1 9 VAL n 1 10 ALA n 1 11 LEU n 1 12 TYR n 1 13 ASP n 1 14 PHE n 1 15 VAL n 1 16 ALA n 1 17 SER n 1 18 GLY n 1 19 ASP n 1 20 ASN n 1 21 THR n 1 22 LEU n 1 23 SER n 1 24 ILE n 1 25 THR n 1 26 LYS n 1 27 GLY n 1 28 GLU n 1 29 LYS n 1 30 LEU n 1 31 ARG n 1 32 VAL n 1 33 LEU n 1 34 GLY n 1 35 TYR n 1 36 ASN n 1 37 HIS n 1 38 ASN n 1 39 GLY n 1 40 GLU n 1 41 TRP n 1 42 CYS n 1 43 GLU n 1 44 ALA n 1 45 GLN n 1 46 THR n 1 47 LYS n 1 48 ASN n 1 49 GLY n 1 50 GLN n 1 51 GLY n 1 52 TRP n 1 53 VAL n 1 54 PRO n 1 55 SER n 1 56 GLN n 1 57 TYR n 1 58 ILE n 1 59 THR n 1 60 PRO n 1 61 VAL n 1 62 ASN n 1 63 SER n 2 1 ACE n 2 2 ALA n 2 3 PRO n 2 4 SER n 2 5 TYR n 2 6 SER n 2 7 PRO n 2 8 PRO n 2 9 PRO n 2 10 PRO n 2 11 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ABL1, ABL, JTK7' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PBAT4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pBAT4 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'The author states that the p41 peptide is a member of a group of peptide ligands designed to bind specifically the Abl-SH3 domain.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ABL1_HUMAN P00519 1 ENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNS 60 ? 2 PDB 3EG1 3EG1 2 '(ACE)APSYSPPPPP' ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EG1 A 2 ? 63 ? P00519 60 ? 121 ? 60 121 2 1 3EG1 B 2 ? 63 ? P00519 60 ? 121 ? 60 121 3 2 3EG1 C 1 ? 11 ? 3EG1 0 ? 10 ? 0 10 4 2 3EG1 D 1 ? 11 ? 3EG1 0 ? 10 ? 0 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3EG1 MET A 1 ? UNP P00519 ? ? 'initiating methionine' 59 1 1 3EG1 GLN A 56 ? UNP P00519 ASN 114 'engineered mutation' 114 2 2 3EG1 MET B 1 ? UNP P00519 ? ? 'initiating methionine' 59 3 2 3EG1 GLN B 56 ? UNP P00519 ASN 114 'engineered mutation' 114 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3EG1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 34.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.temp 288 _exptl_crystal_grow.pdbx_details '2M ammonium sulphate, 0.4 M NaCl, 0.1 M sodium citrate, 10% glycerol, pH 3.5, vapor diffusion, hanging drop, temperature 288K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER SMART 6000' _diffrn_detector.pdbx_collection_date 2005-12-19 _diffrn_detector.details 'Montel Optics' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'BRUKER MICROSTAR MICRO-FOCUS' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3EG1 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.850 _reflns.d_resolution_low 47.636 _reflns.number_all 10944 _reflns.number_obs 10158 _reflns.percent_possible_obs 92.8 _reflns.pdbx_Rmerge_I_obs 0.0653 _reflns.pdbx_Rsym_value 0.0653 _reflns.B_iso_Wilson_estimate 17.692 _reflns.pdbx_redundancy 7.60 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.95 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 72.5 _reflns_shell.Rmerge_I_obs 0.2426 _reflns_shell.meanI_over_sigI_obs 3.49 _reflns_shell.pdbx_Rsym_value 0.2649 _reflns_shell.pdbx_redundancy 1.26 _reflns_shell.number_unique_all 1123 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3EG1 _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 18.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 92.770 _refine.ls_number_reflns_obs 10098 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.192 _refine.ls_R_factor_R_work 0.185 _refine.ls_R_factor_R_free 0.248 _refine.ls_percent_reflns_R_free 9.900 _refine.ls_number_reflns_R_free 998 _refine.B_iso_mean 16.612 _refine.aniso_B[1][1] 0.140 _refine.aniso_B[2][2] -0.090 _refine.aniso_B[3][3] -0.050 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.pdbx_overall_ESU_R 0.178 _refine.pdbx_overall_ESU_R_Free 0.170 _refine.overall_SU_ML 0.106 _refine.overall_SU_B 7.118 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 60.10 _refine.B_iso_min 4.49 _refine.occupancy_max 1.00 _refine.occupancy_min 0.10 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB entry 2o88' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1045 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 54 _refine_hist.number_atoms_total 1109 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 18.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1091 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1500 2.106 1.976 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 132 6.363 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 47 37.555 25.319 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 147 15.556 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 2 16.349 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 155 0.151 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 862 0.014 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 516 0.228 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 746 0.323 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 53 0.156 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 53 0.179 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 12 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 690 1.312 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1106 1.934 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 466 2.825 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 393 3.849 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 1 'MEDIUM POSITIONAL' A 208 0.170 0.500 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 1 'LOOSE POSITIONAL' A 202 0.610 5.000 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? 1 1 'MEDIUM THERMAL' A 208 0.880 2.000 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? 1 1 'LOOSE THERMAL' A 202 1.850 10.000 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? 2 1 'MEDIUM POSITIONAL' C 72 0.170 0.500 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? 2 1 'MEDIUM THERMAL' C 72 0.840 2.000 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.898 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 69.630 _refine_ls_shell.number_reflns_R_work 474 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.202 _refine_ls_shell.R_factor_R_free 0.286 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 532 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 C 2 2 D # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ASN 6 . A THR 46 . A ASN 64 A THR 104 5 ? 1 2 1 B ASN 6 . B THR 46 . B ASN 64 B THR 104 5 ? 1 1 2 A GLY 51 . A VAL 61 . A GLY 109 A VAL 119 5 ? 1 2 2 B GLY 51 . B VAL 61 . B GLY 109 B VAL 119 5 ? 2 1 1 C ACE 1 . C PRO 11 . C ACE 0 C PRO 10 4 ? 2 2 1 D ACE 1 . D PRO 11 . D ACE 0 D PRO 10 4 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 3EG1 _struct.title ;Crystal structure of the N114Q mutant of ABL-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EG1 _struct_keywords.text ;beta, SH3 domain, ATP-binding, Cell adhesion, Cytoskeleton, Kinase, Lipoprotein, Magnesium, Manganese, Metal-binding, Myristate, Nucleotide-binding, Nucleus, Phosphoprotein, Proto-oncogene, SH2 domain, Transferase, Tyrosine-protein kinase, SIGNALING PROTEIN, Transferase-Signaling protein COMPLEX ; _struct_keywords.pdbx_keywords 'Transferase/Signaling protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C ACE 1 C ? ? ? 1_555 C ALA 2 N ? ? C ACE 0 C ALA 1 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale2 covale both ? D ACE 1 C ? ? ? 1_555 D ALA 2 N ? ? D ACE 0 D ALA 1 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 49 ? PRO A 54 ? GLY A 107 PRO A 112 A 2 TRP A 41 ? THR A 46 ? TRP A 99 THR A 104 A 3 LYS A 29 ? TYR A 35 ? LYS A 87 TYR A 93 A 4 LEU A 7 ? ALA A 10 ? LEU A 65 ALA A 68 A 5 ILE A 58 ? PRO A 60 ? ILE A 116 PRO A 118 B 1 GLY B 49 ? PRO B 54 ? GLY B 107 PRO B 112 B 2 TRP B 41 ? THR B 46 ? TRP B 99 THR B 104 B 3 LYS B 29 ? TYR B 35 ? LYS B 87 TYR B 93 B 4 LEU B 7 ? ALA B 10 ? LEU B 65 ALA B 68 B 5 ILE B 58 ? PRO B 60 ? ILE B 116 PRO B 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 49 ? O GLY A 107 N THR A 46 ? N THR A 104 A 2 3 O GLU A 43 ? O GLU A 101 N LEU A 33 ? N LEU A 91 A 3 4 O LEU A 30 ? O LEU A 88 N PHE A 8 ? N PHE A 66 A 4 5 N VAL A 9 ? N VAL A 67 O THR A 59 ? O THR A 117 B 1 2 O GLY B 49 ? O GLY B 107 N THR B 46 ? N THR B 104 B 2 3 O GLU B 43 ? O GLU B 101 N LEU B 33 ? N LEU B 91 B 3 4 O LEU B 30 ? O LEU B 88 N PHE B 8 ? N PHE B 66 B 4 5 N VAL B 9 ? N VAL B 67 O THR B 59 ? O THR B 117 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C ACE 0 ? 4 'BINDING SITE FOR RESIDUE ACE C 0' AC2 Software D ACE 0 ? 4 'BINDING SITE FOR RESIDUE ACE D 0' AC3 Software A SO4 2 ? 5 'BINDING SITE FOR RESIDUE SO4 A 2' AC4 Software B SO4 1 ? 3 'BINDING SITE FOR RESIDUE SO4 B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TRP A 52 ? TRP A 110 . ? 1_555 ? 2 AC1 4 ARG B 31 ? ARG B 89 . ? 1_555 ? 3 AC1 4 GLN B 45 ? GLN B 103 . ? 1_555 ? 4 AC1 4 ALA C 2 ? ALA C 1 . ? 1_555 ? 5 AC2 4 GLN A 45 ? GLN A 103 . ? 1_555 ? 6 AC2 4 ASN B 20 ? ASN B 78 . ? 1_555 ? 7 AC2 4 TRP B 52 ? TRP B 110 . ? 1_555 ? 8 AC2 4 ALA D 2 ? ALA D 1 . ? 1_555 ? 9 AC3 5 HOH G . ? HOH A 48 . ? 1_555 ? 10 AC3 5 ASN A 36 ? ASN A 94 . ? 1_555 ? 11 AC3 5 HIS A 37 ? HIS A 95 . ? 1_555 ? 12 AC3 5 ARG B 31 ? ARG B 89 . ? 1_555 ? 13 AC3 5 ALA C 2 ? ALA C 1 . ? 1_555 ? 14 AC4 3 ASN B 36 ? ASN B 94 . ? 1_555 ? 15 AC4 3 HIS B 37 ? HIS B 95 . ? 1_555 ? 16 AC4 3 HOH H . ? HOH B 132 . ? 1_555 ? # _atom_sites.entry_id 3EG1 _atom_sites.fract_transf_matrix[1][1] 0.021741 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020993 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017966 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 59 ? ? ? A . n A 1 2 GLU 2 60 ? ? ? A . n A 1 3 ASN 3 61 ? ? ? A . n A 1 4 ASP 4 62 ? ? ? A . n A 1 5 PRO 5 63 ? ? ? A . n A 1 6 ASN 6 64 64 ASN ASN A . n A 1 7 LEU 7 65 65 LEU LEU A . n A 1 8 PHE 8 66 66 PHE PHE A . n A 1 9 VAL 9 67 67 VAL VAL A . n A 1 10 ALA 10 68 68 ALA ALA A . n A 1 11 LEU 11 69 69 LEU LEU A . n A 1 12 TYR 12 70 70 TYR TYR A . n A 1 13 ASP 13 71 71 ASP ASP A . n A 1 14 PHE 14 72 72 PHE PHE A . n A 1 15 VAL 15 73 73 VAL VAL A . n A 1 16 ALA 16 74 74 ALA ALA A . n A 1 17 SER 17 75 75 SER SER A . n A 1 18 GLY 18 76 76 GLY GLY A . n A 1 19 ASP 19 77 77 ASP ASP A . n A 1 20 ASN 20 78 78 ASN ASN A . n A 1 21 THR 21 79 79 THR THR A . n A 1 22 LEU 22 80 80 LEU LEU A . n A 1 23 SER 23 81 81 SER SER A . n A 1 24 ILE 24 82 82 ILE ILE A . n A 1 25 THR 25 83 83 THR THR A . n A 1 26 LYS 26 84 84 LYS LYS A . n A 1 27 GLY 27 85 85 GLY GLY A . n A 1 28 GLU 28 86 86 GLU GLU A . n A 1 29 LYS 29 87 87 LYS LYS A . n A 1 30 LEU 30 88 88 LEU LEU A . n A 1 31 ARG 31 89 89 ARG ARG A . n A 1 32 VAL 32 90 90 VAL VAL A . n A 1 33 LEU 33 91 91 LEU LEU A . n A 1 34 GLY 34 92 92 GLY GLY A . n A 1 35 TYR 35 93 93 TYR TYR A . n A 1 36 ASN 36 94 94 ASN ASN A . n A 1 37 HIS 37 95 95 HIS HIS A . n A 1 38 ASN 38 96 96 ASN ASN A . n A 1 39 GLY 39 97 97 GLY GLY A . n A 1 40 GLU 40 98 98 GLU GLU A . n A 1 41 TRP 41 99 99 TRP TRP A . n A 1 42 CYS 42 100 100 CYS CYS A . n A 1 43 GLU 43 101 101 GLU GLU A . n A 1 44 ALA 44 102 102 ALA ALA A . n A 1 45 GLN 45 103 103 GLN GLN A . n A 1 46 THR 46 104 104 THR THR A . n A 1 47 LYS 47 105 105 LYS LYS A . n A 1 48 ASN 48 106 106 ASN ASN A . n A 1 49 GLY 49 107 107 GLY GLY A . n A 1 50 GLN 50 108 108 GLN GLN A . n A 1 51 GLY 51 109 109 GLY GLY A . n A 1 52 TRP 52 110 110 TRP TRP A . n A 1 53 VAL 53 111 111 VAL VAL A . n A 1 54 PRO 54 112 112 PRO PRO A . n A 1 55 SER 55 113 113 SER SER A . n A 1 56 GLN 56 114 114 GLN GLN A . n A 1 57 TYR 57 115 115 TYR TYR A . n A 1 58 ILE 58 116 116 ILE ILE A . n A 1 59 THR 59 117 117 THR THR A . n A 1 60 PRO 60 118 118 PRO PRO A . n A 1 61 VAL 61 119 119 VAL VAL A . n A 1 62 ASN 62 120 120 ASN ASN A . n A 1 63 SER 63 121 121 SER SER A . n B 1 1 MET 1 59 ? ? ? B . n B 1 2 GLU 2 60 ? ? ? B . n B 1 3 ASN 3 61 ? ? ? B . n B 1 4 ASP 4 62 ? ? ? B . n B 1 5 PRO 5 63 ? ? ? B . n B 1 6 ASN 6 64 64 ASN ASN B . n B 1 7 LEU 7 65 65 LEU LEU B . n B 1 8 PHE 8 66 66 PHE PHE B . n B 1 9 VAL 9 67 67 VAL VAL B . n B 1 10 ALA 10 68 68 ALA ALA B . n B 1 11 LEU 11 69 69 LEU LEU B . n B 1 12 TYR 12 70 70 TYR TYR B . n B 1 13 ASP 13 71 71 ASP ASP B . n B 1 14 PHE 14 72 72 PHE PHE B . n B 1 15 VAL 15 73 73 VAL VAL B . n B 1 16 ALA 16 74 74 ALA ALA B . n B 1 17 SER 17 75 75 SER SER B . n B 1 18 GLY 18 76 76 GLY GLY B . n B 1 19 ASP 19 77 77 ASP ASP B . n B 1 20 ASN 20 78 78 ASN ASN B . n B 1 21 THR 21 79 79 THR THR B . n B 1 22 LEU 22 80 80 LEU LEU B . n B 1 23 SER 23 81 81 SER SER B . n B 1 24 ILE 24 82 82 ILE ILE B . n B 1 25 THR 25 83 83 THR THR B . n B 1 26 LYS 26 84 84 LYS LYS B . n B 1 27 GLY 27 85 85 GLY GLY B . n B 1 28 GLU 28 86 86 GLU GLU B . n B 1 29 LYS 29 87 87 LYS LYS B . n B 1 30 LEU 30 88 88 LEU LEU B . n B 1 31 ARG 31 89 89 ARG ARG B . n B 1 32 VAL 32 90 90 VAL VAL B . n B 1 33 LEU 33 91 91 LEU LEU B . n B 1 34 GLY 34 92 92 GLY GLY B . n B 1 35 TYR 35 93 93 TYR TYR B . n B 1 36 ASN 36 94 94 ASN ASN B . n B 1 37 HIS 37 95 95 HIS HIS B . n B 1 38 ASN 38 96 96 ASN ASN B . n B 1 39 GLY 39 97 97 GLY GLY B . n B 1 40 GLU 40 98 98 GLU GLU B . n B 1 41 TRP 41 99 99 TRP TRP B . n B 1 42 CYS 42 100 100 CYS CYS B . n B 1 43 GLU 43 101 101 GLU GLU B . n B 1 44 ALA 44 102 102 ALA ALA B . n B 1 45 GLN 45 103 103 GLN GLN B . n B 1 46 THR 46 104 104 THR THR B . n B 1 47 LYS 47 105 105 LYS LYS B . n B 1 48 ASN 48 106 106 ASN ASN B . n B 1 49 GLY 49 107 107 GLY GLY B . n B 1 50 GLN 50 108 108 GLN GLN B . n B 1 51 GLY 51 109 109 GLY GLY B . n B 1 52 TRP 52 110 110 TRP TRP B . n B 1 53 VAL 53 111 111 VAL VAL B . n B 1 54 PRO 54 112 112 PRO PRO B . n B 1 55 SER 55 113 113 SER SER B . n B 1 56 GLN 56 114 114 GLN GLN B . n B 1 57 TYR 57 115 115 TYR TYR B . n B 1 58 ILE 58 116 116 ILE ILE B . n B 1 59 THR 59 117 117 THR THR B . n B 1 60 PRO 60 118 118 PRO PRO B . n B 1 61 VAL 61 119 119 VAL VAL B . n B 1 62 ASN 62 120 ? ? ? B . n B 1 63 SER 63 121 ? ? ? B . n C 2 1 ACE 1 0 0 ACE ACE C . n C 2 2 ALA 2 1 1 ALA ALA C . n C 2 3 PRO 3 2 2 PRO PRO C . n C 2 4 SER 4 3 3 SER SER C . n C 2 5 TYR 5 4 4 TYR TYR C . n C 2 6 SER 6 5 5 SER SER C . n C 2 7 PRO 7 6 6 PRO PRO C . n C 2 8 PRO 8 7 7 PRO PRO C . n C 2 9 PRO 9 8 8 PRO PRO C . n C 2 10 PRO 10 9 9 PRO PRO C . n C 2 11 PRO 11 10 10 PRO PRO C . n D 2 1 ACE 1 0 0 ACE ACE D . n D 2 2 ALA 2 1 1 ALA ALA D . n D 2 3 PRO 3 2 2 PRO PRO D . n D 2 4 SER 4 3 3 SER SER D . n D 2 5 TYR 5 4 4 TYR TYR D . n D 2 6 SER 6 5 5 SER SER D . n D 2 7 PRO 7 6 6 PRO PRO D . n D 2 8 PRO 8 7 7 PRO PRO D . n D 2 9 PRO 9 8 8 PRO PRO D . n D 2 10 PRO 10 9 9 PRO PRO D . n D 2 11 PRO 11 10 10 PRO PRO D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 1 2 2 SO4 SO4 A . F 3 SO4 1 1 1 SO4 SO4 B . G 4 HOH 1 13 13 HOH HOH A . G 4 HOH 2 15 15 HOH HOH A . G 4 HOH 3 19 19 HOH HOH A . G 4 HOH 4 22 22 HOH HOH A . G 4 HOH 5 23 23 HOH HOH A . G 4 HOH 6 24 24 HOH HOH A . G 4 HOH 7 25 25 HOH HOH A . G 4 HOH 8 29 29 HOH HOH A . G 4 HOH 9 31 31 HOH HOH A . G 4 HOH 10 32 32 HOH HOH A . G 4 HOH 11 33 33 HOH HOH A . G 4 HOH 12 34 34 HOH HOH A . G 4 HOH 13 35 35 HOH HOH A . G 4 HOH 14 38 38 HOH HOH A . G 4 HOH 15 39 39 HOH HOH A . G 4 HOH 16 40 40 HOH HOH A . G 4 HOH 17 42 42 HOH HOH A . G 4 HOH 18 43 43 HOH HOH A . G 4 HOH 19 44 44 HOH HOH A . G 4 HOH 20 46 46 HOH HOH A . G 4 HOH 21 47 47 HOH HOH A . G 4 HOH 22 48 48 HOH HOH A . G 4 HOH 23 51 51 HOH HOH A . G 4 HOH 24 54 54 HOH HOH A . G 4 HOH 25 122 1 HOH HOH A . G 4 HOH 26 125 4 HOH HOH A . G 4 HOH 27 131 10 HOH HOH A . H 4 HOH 1 123 2 HOH HOH B . H 4 HOH 2 124 3 HOH HOH B . H 4 HOH 3 126 5 HOH HOH B . H 4 HOH 4 127 6 HOH HOH B . H 4 HOH 5 129 8 HOH HOH B . H 4 HOH 6 130 9 HOH HOH B . H 4 HOH 7 132 12 HOH HOH B . H 4 HOH 8 133 17 HOH HOH B . H 4 HOH 9 134 18 HOH HOH B . H 4 HOH 10 135 20 HOH HOH B . H 4 HOH 11 136 26 HOH HOH B . H 4 HOH 12 137 27 HOH HOH B . H 4 HOH 13 138 37 HOH HOH B . H 4 HOH 14 139 41 HOH HOH B . H 4 HOH 15 140 45 HOH HOH B . H 4 HOH 16 141 49 HOH HOH B . H 4 HOH 17 142 53 HOH HOH B . I 4 HOH 1 14 14 HOH HOH C . I 4 HOH 2 30 30 HOH HOH C . I 4 HOH 3 50 50 HOH HOH C . I 4 HOH 4 52 52 HOH HOH C . I 4 HOH 5 128 7 HOH HOH C . J 4 HOH 1 11 11 HOH HOH D . J 4 HOH 2 16 16 HOH HOH D . J 4 HOH 3 21 21 HOH HOH D . J 4 HOH 4 28 28 HOH HOH D . J 4 HOH 5 36 36 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J 2 1 A,C,E,G,I 3 1 B,D,F,H,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1110 ? 2 MORE -9 ? 2 'SSA (A^2)' 4370 ? 3 'ABSA (A^2)' 1120 ? 3 MORE -8 ? 3 'SSA (A^2)' 3970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Source and taxonomy' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' entity_src_gen 3 3 'Structure model' pdbx_entity_src_syn 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' pdbx_initial_refinement_model 10 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 4 3 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 5 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 6 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 7 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 3 'Structure model' '_struct_ref_seq_dif.details' 9 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 12 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 13 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 14 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 15 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 16 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 17 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -3.3516 8.5298 -13.5566 -0.1143 -0.0628 -0.1085 0.0021 -0.0304 0.0067 8.7591 9.1640 7.6877 -2.7481 0.8999 4.2004 0.3111 -0.0843 -0.2268 -0.3111 -0.2955 -0.0008 0.2099 0.3968 0.2691 'X-RAY DIFFRACTION' 2 ? refined -7.9956 12.5223 -9.4656 -0.0977 -0.0843 -0.0609 -0.0075 0.0329 -0.0016 23.4244 3.9010 3.9962 -5.4805 0.7792 1.1940 0.0133 0.0845 -0.0978 -0.0457 0.4917 -0.0456 0.1098 -0.0284 0.0051 'X-RAY DIFFRACTION' 3 ? refined -11.1521 1.6543 -13.4951 -0.0546 -0.0763 0.0755 0.0234 0.0287 0.0581 19.9043 4.1953 19.8202 -2.1112 10.1342 6.5554 -0.2563 0.2965 -0.0402 -0.3230 -0.5923 0.2887 0.2549 1.0282 0.3351 'X-RAY DIFFRACTION' 4 ? refined -15.7228 9.7662 -22.0531 -0.0757 -0.0452 0.0384 0.0536 -0.0696 0.0048 6.6799 19.1902 20.5698 4.6249 3.5426 6.0563 0.2340 -0.3808 0.1468 0.4465 -0.0640 1.0244 -1.0319 0.3669 -0.7131 'X-RAY DIFFRACTION' 5 ? refined -11.1473 6.0147 -6.7159 -0.0325 0.0539 -0.0177 0.0697 -0.0209 0.0028 24.2608 5.3694 23.2022 -8.3338 -7.3889 -4.3350 -0.7235 0.7593 -0.0358 -1.8988 -0.1415 -0.0814 0.6172 0.5885 1.3116 'X-RAY DIFFRACTION' 6 ? refined -5.0277 6.2936 -16.9306 -0.0049 -0.1157 -0.0757 -0.0060 0.0079 -0.0038 8.2578 4.3163 3.1650 -5.8739 1.7039 -1.6543 -0.0157 -0.0385 0.0542 0.0141 -0.0074 -0.1895 -0.1553 0.3579 0.3722 'X-RAY DIFFRACTION' 7 ? refined -31.8837 2.1533 -9.3193 -0.0235 0.0282 -0.0304 0.0305 -0.0683 0.0169 12.2038 17.8050 21.3756 2.4741 -4.5110 -1.5800 0.1838 0.2533 -0.4370 1.3117 0.4366 -0.1832 -1.0604 0.2418 -0.4253 'X-RAY DIFFRACTION' 8 ? refined -26.9551 3.7602 4.3758 -0.0883 -0.0474 -0.0621 0.0397 0.0233 -0.0765 11.6007 13.1771 17.0841 4.8037 6.1577 3.1860 0.1534 -0.0034 -0.1500 -0.2600 0.5520 -0.1257 0.3530 0.4004 0.5206 'X-RAY DIFFRACTION' 9 ? refined -26.7294 6.6380 -0.8088 -0.0768 -0.0857 -0.0404 -0.0047 0.0080 -0.0011 32.9398 3.6196 5.2894 0.1601 6.1147 0.3231 0.1634 -0.2521 0.0887 -0.2783 0.3503 0.0674 -0.0492 -0.2583 0.0234 'X-RAY DIFFRACTION' 10 ? refined -23.4661 1.8684 -10.6803 -0.0434 -0.0688 -0.0831 -0.0217 -0.0207 -0.0022 27.8752 30.3396 8.2894 -24.3902 -1.6982 -1.5957 -0.2414 0.0700 0.1714 0.1998 -0.2677 0.3464 -0.2141 0.4712 -0.2601 'X-RAY DIFFRACTION' 11 ? refined -19.4207 -4.2114 -3.4429 -0.0630 -0.0413 -0.0375 0.0697 -0.0161 -0.0013 6.4953 16.3868 9.6765 -3.4693 0.9400 -2.0236 0.4396 -0.4457 0.0061 0.2826 -0.2884 -0.4078 -0.6262 0.8835 0.7205 'X-RAY DIFFRACTION' 12 ? refined -26.2549 3.4366 -4.8635 -0.0971 -0.0836 -0.0742 0.0238 -0.0087 -0.0330 7.0967 4.0949 4.4336 2.8609 -1.2243 -2.3191 0.1811 -0.2358 0.0547 0.1605 0.3711 0.1538 -0.3058 -0.0744 -0.2244 'X-RAY DIFFRACTION' 13 ? refined -11.5095 16.6731 -20.1805 -0.0243 -0.0730 0.0028 0.0073 -0.0301 0.0389 12.9842 6.0150 7.2800 5.4948 -5.4242 -4.5260 0.1559 -0.2859 0.1300 0.1025 -0.0869 -0.0994 -0.1054 -0.5100 0.2295 'X-RAY DIFFRACTION' 14 ? refined -22.9282 -4.1184 4.6118 0.0001 -0.0407 -0.0776 0.0694 -0.0210 0.0296 2.1446 8.7831 9.3245 2.0286 2.6821 -3.8645 0.2451 -0.0277 -0.2174 -0.5930 -0.0448 0.3342 -0.0634 0.4587 -0.3767 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A A 73 ? 64 . . . . 'X-RAY DIFFRACTION' ? 2 2 A A 87 ? 74 . . . . 'X-RAY DIFFRACTION' ? 3 3 A A 93 ? 88 . . . . 'X-RAY DIFFRACTION' ? 4 4 A A 99 ? 94 . . . . 'X-RAY DIFFRACTION' ? 5 5 A A 109 ? 100 . . . . 'X-RAY DIFFRACTION' ? 6 6 A A 121 ? 110 . . . . 'X-RAY DIFFRACTION' ? 7 7 B B 69 ? 64 . . . . 'X-RAY DIFFRACTION' ? 8 8 B B 76 ? 70 . . . . 'X-RAY DIFFRACTION' ? 9 9 B B 87 ? 77 . . . . 'X-RAY DIFFRACTION' ? 10 10 B B 93 ? 88 . . . . 'X-RAY DIFFRACTION' ? 11 11 B B 102 ? 94 . . . . 'X-RAY DIFFRACTION' ? 12 12 B B 119 ? 103 . . . . 'X-RAY DIFFRACTION' ? 13 13 C C 10 ? 1 . . . . 'X-RAY DIFFRACTION' ? 14 14 D D 10 ? 1 . . . . 'X-RAY DIFFRACTION' ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SAINT . ? package ? ? 'data scaling' http://www.bruker-axs.de/ ? ? 1 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 2 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 'PROTEUM PLUS' . ? ? ? ? 'data collection' ? ? ? 5 SAINT . ? ? ? ? 'data reduction' ? ? ? 6 SCALA . ? ? ? ? 'data scaling' ? ? ? 7 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 106 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -146.26 _pdbx_validate_torsion.psi 17.10 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 59 ? A MET 1 2 1 Y 1 A GLU 60 ? A GLU 2 3 1 Y 1 A ASN 61 ? A ASN 3 4 1 Y 1 A ASP 62 ? A ASP 4 5 1 Y 1 A PRO 63 ? A PRO 5 6 1 Y 1 B MET 59 ? B MET 1 7 1 Y 1 B GLU 60 ? B GLU 2 8 1 Y 1 B ASN 61 ? B ASN 3 9 1 Y 1 B ASP 62 ? B ASP 4 10 1 Y 1 B PRO 63 ? B PRO 5 11 1 Y 1 B ASN 120 ? B ASN 62 12 1 Y 1 B SER 121 ? B SER 63 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 SO4 S S N N 311 SO4 O1 O N N 312 SO4 O2 O N N 313 SO4 O3 O N N 314 SO4 O4 O N N 315 THR N N N N 316 THR CA C N S 317 THR C C N N 318 THR O O N N 319 THR CB C N R 320 THR OG1 O N N 321 THR CG2 C N N 322 THR OXT O N N 323 THR H H N N 324 THR H2 H N N 325 THR HA H N N 326 THR HB H N N 327 THR HG1 H N N 328 THR HG21 H N N 329 THR HG22 H N N 330 THR HG23 H N N 331 THR HXT H N N 332 TRP N N N N 333 TRP CA C N S 334 TRP C C N N 335 TRP O O N N 336 TRP CB C N N 337 TRP CG C Y N 338 TRP CD1 C Y N 339 TRP CD2 C Y N 340 TRP NE1 N Y N 341 TRP CE2 C Y N 342 TRP CE3 C Y N 343 TRP CZ2 C Y N 344 TRP CZ3 C Y N 345 TRP CH2 C Y N 346 TRP OXT O N N 347 TRP H H N N 348 TRP H2 H N N 349 TRP HA H N N 350 TRP HB2 H N N 351 TRP HB3 H N N 352 TRP HD1 H N N 353 TRP HE1 H N N 354 TRP HE3 H N N 355 TRP HZ2 H N N 356 TRP HZ3 H N N 357 TRP HH2 H N N 358 TRP HXT H N N 359 TYR N N N N 360 TYR CA C N S 361 TYR C C N N 362 TYR O O N N 363 TYR CB C N N 364 TYR CG C Y N 365 TYR CD1 C Y N 366 TYR CD2 C Y N 367 TYR CE1 C Y N 368 TYR CE2 C Y N 369 TYR CZ C Y N 370 TYR OH O N N 371 TYR OXT O N N 372 TYR H H N N 373 TYR H2 H N N 374 TYR HA H N N 375 TYR HB2 H N N 376 TYR HB3 H N N 377 TYR HD1 H N N 378 TYR HD2 H N N 379 TYR HE1 H N N 380 TYR HE2 H N N 381 TYR HH H N N 382 TYR HXT H N N 383 VAL N N N N 384 VAL CA C N S 385 VAL C C N N 386 VAL O O N N 387 VAL CB C N N 388 VAL CG1 C N N 389 VAL CG2 C N N 390 VAL OXT O N N 391 VAL H H N N 392 VAL H2 H N N 393 VAL HA H N N 394 VAL HB H N N 395 VAL HG11 H N N 396 VAL HG12 H N N 397 VAL HG13 H N N 398 VAL HG21 H N N 399 VAL HG22 H N N 400 VAL HG23 H N N 401 VAL HXT H N N 402 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PRO N CA sing N N 266 PRO N CD sing N N 267 PRO N H sing N N 268 PRO CA C sing N N 269 PRO CA CB sing N N 270 PRO CA HA sing N N 271 PRO C O doub N N 272 PRO C OXT sing N N 273 PRO CB CG sing N N 274 PRO CB HB2 sing N N 275 PRO CB HB3 sing N N 276 PRO CG CD sing N N 277 PRO CG HG2 sing N N 278 PRO CG HG3 sing N N 279 PRO CD HD2 sing N N 280 PRO CD HD3 sing N N 281 PRO OXT HXT sing N N 282 SER N CA sing N N 283 SER N H sing N N 284 SER N H2 sing N N 285 SER CA C sing N N 286 SER CA CB sing N N 287 SER CA HA sing N N 288 SER C O doub N N 289 SER C OXT sing N N 290 SER CB OG sing N N 291 SER CB HB2 sing N N 292 SER CB HB3 sing N N 293 SER OG HG sing N N 294 SER OXT HXT sing N N 295 SO4 S O1 doub N N 296 SO4 S O2 doub N N 297 SO4 S O3 sing N N 298 SO4 S O4 sing N N 299 THR N CA sing N N 300 THR N H sing N N 301 THR N H2 sing N N 302 THR CA C sing N N 303 THR CA CB sing N N 304 THR CA HA sing N N 305 THR C O doub N N 306 THR C OXT sing N N 307 THR CB OG1 sing N N 308 THR CB CG2 sing N N 309 THR CB HB sing N N 310 THR OG1 HG1 sing N N 311 THR CG2 HG21 sing N N 312 THR CG2 HG22 sing N N 313 THR CG2 HG23 sing N N 314 THR OXT HXT sing N N 315 TRP N CA sing N N 316 TRP N H sing N N 317 TRP N H2 sing N N 318 TRP CA C sing N N 319 TRP CA CB sing N N 320 TRP CA HA sing N N 321 TRP C O doub N N 322 TRP C OXT sing N N 323 TRP CB CG sing N N 324 TRP CB HB2 sing N N 325 TRP CB HB3 sing N N 326 TRP CG CD1 doub Y N 327 TRP CG CD2 sing Y N 328 TRP CD1 NE1 sing Y N 329 TRP CD1 HD1 sing N N 330 TRP CD2 CE2 doub Y N 331 TRP CD2 CE3 sing Y N 332 TRP NE1 CE2 sing Y N 333 TRP NE1 HE1 sing N N 334 TRP CE2 CZ2 sing Y N 335 TRP CE3 CZ3 doub Y N 336 TRP CE3 HE3 sing N N 337 TRP CZ2 CH2 doub Y N 338 TRP CZ2 HZ2 sing N N 339 TRP CZ3 CH2 sing Y N 340 TRP CZ3 HZ3 sing N N 341 TRP CH2 HH2 sing N N 342 TRP OXT HXT sing N N 343 TYR N CA sing N N 344 TYR N H sing N N 345 TYR N H2 sing N N 346 TYR CA C sing N N 347 TYR CA CB sing N N 348 TYR CA HA sing N N 349 TYR C O doub N N 350 TYR C OXT sing N N 351 TYR CB CG sing N N 352 TYR CB HB2 sing N N 353 TYR CB HB3 sing N N 354 TYR CG CD1 doub Y N 355 TYR CG CD2 sing Y N 356 TYR CD1 CE1 sing Y N 357 TYR CD1 HD1 sing N N 358 TYR CD2 CE2 doub Y N 359 TYR CD2 HD2 sing N N 360 TYR CE1 CZ doub Y N 361 TYR CE1 HE1 sing N N 362 TYR CE2 CZ sing Y N 363 TYR CE2 HE2 sing N N 364 TYR CZ OH sing N N 365 TYR OH HH sing N N 366 TYR OXT HXT sing N N 367 VAL N CA sing N N 368 VAL N H sing N N 369 VAL N H2 sing N N 370 VAL CA C sing N N 371 VAL CA CB sing N N 372 VAL CA HA sing N N 373 VAL C O doub N N 374 VAL C OXT sing N N 375 VAL CB CG1 sing N N 376 VAL CB CG2 sing N N 377 VAL CB HB sing N N 378 VAL CG1 HG11 sing N N 379 VAL CG1 HG12 sing N N 380 VAL CG1 HG13 sing N N 381 VAL CG2 HG21 sing N N 382 VAL CG2 HG22 sing N N 383 VAL CG2 HG23 sing N N 384 VAL OXT HXT sing N N 385 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2O88 _pdbx_initial_refinement_model.details 'PDB entry 2o88' #