HEADER TRANSFERASE 15-SEP-08 3EIC TITLE X-RAY STRUCTURE OF ACANTHAMOEBA PLOYPHAGA MIMIVIRUS NUCLEOSIDE TITLE 2 DIPHOSPHATE KINASE COMPLEXED WITH UDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE DIPHOSPHATE KINASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: NDP KINASE, NDK; COMPND 5 EC: 2.7.4.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACANTHAMOEBA POLYPHAGA MIMIVIRUS; SOURCE 3 ORGANISM_TAXID: 212035; SOURCE 4 GENE: NDK, MIMI_R418; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDIGS02 KEYWDS NDK PHOSPHOTRANSFERASE NUCLEOTIDE BINDING, ATP-BINDING, KINASE, KEYWDS 2 MAGNESIUM, METAL-BINDING, NUCLEOTIDE METABOLISM, NUCLEOTIDE-BINDING, KEYWDS 3 PHOSPHOPROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.JEUDY,A.LARTIGUE,J.M.CLAVERIE,C.ABERGEL REVDAT 3 30-AUG-23 3EIC 1 REMARK SEQADV REVDAT 2 25-AUG-09 3EIC 1 JRNL REVDAT 1 16-JUN-09 3EIC 0 JRNL AUTH S.JEUDY,A.LARTIGUE,J.M.CLAVERIE,C.ABERGEL JRNL TITL DISSECTING THE UNIQUE NUCLEOTIDE SPECIFICITY OF MIMIVIRUS JRNL TITL 2 NUCLEOSIDE DIPHOSPHATE KINASE. JRNL REF J.VIROL. V. 83 7142 2009 JRNL REFN ISSN 0022-538X JRNL PMID 19439473 JRNL DOI 10.1128/JVI.00511-09 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 48109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2570 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3502 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 186 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6338 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 156 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.247 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.196 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.146 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6613 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8950 ; 1.396 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 783 ; 6.398 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 317 ;36.054 ;24.322 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1190 ;17.528 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;24.046 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 986 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4909 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2989 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4512 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 419 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 101 ; 0.208 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.080 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4036 ; 0.723 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6378 ; 1.315 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2898 ; 1.965 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2572 ; 3.293 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.064 REMARK 200 MONOCHROMATOR : SI 311 AND SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49557 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 92.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.33100 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2B8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD 40 TO 44%, MOPS 0.1M, PH 7.4, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.47000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 92.47000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.23600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.36300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.23600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.36300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 92.47000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.23600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.36300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 92.47000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.23600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.36300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HEXAMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 160.94400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.47000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A -4 REMARK 465 LYS A -3 REMARK 465 LYS A -2 REMARK 465 LYS A 132 REMARK 465 MET A 133 REMARK 465 GLU A 134 REMARK 465 THR A 135 REMARK 465 ASP A 136 REMARK 465 ASN A 137 REMARK 465 TYR B -4 REMARK 465 LYS B -3 REMARK 465 LYS B -2 REMARK 465 ALA B -1 REMARK 465 GLY B 0 REMARK 465 THR B 131 REMARK 465 LYS B 132 REMARK 465 MET B 133 REMARK 465 GLU B 134 REMARK 465 THR B 135 REMARK 465 ASP B 136 REMARK 465 ASN B 137 REMARK 465 TYR C -4 REMARK 465 LYS C -3 REMARK 465 LYS C -2 REMARK 465 ALA C -1 REMARK 465 LYS C 132 REMARK 465 MET C 133 REMARK 465 GLU C 134 REMARK 465 THR C 135 REMARK 465 ASP C 136 REMARK 465 ASN C 137 REMARK 465 TYR D -4 REMARK 465 LYS D -3 REMARK 465 LYS D -2 REMARK 465 ALA D -1 REMARK 465 LYS D 132 REMARK 465 MET D 133 REMARK 465 GLU D 134 REMARK 465 THR D 135 REMARK 465 ASP D 136 REMARK 465 ASN D 137 REMARK 465 TYR E -4 REMARK 465 LYS E -3 REMARK 465 LYS E -2 REMARK 465 ALA E -1 REMARK 465 LYS E 132 REMARK 465 MET E 133 REMARK 465 GLU E 134 REMARK 465 THR E 135 REMARK 465 ASP E 136 REMARK 465 ASN E 137 REMARK 465 TYR F -4 REMARK 465 LYS F -3 REMARK 465 LYS F -2 REMARK 465 ALA F -1 REMARK 465 GLU F 130 REMARK 465 THR F 131 REMARK 465 LYS F 132 REMARK 465 MET F 133 REMARK 465 GLU F 134 REMARK 465 THR F 135 REMARK 465 ASP F 136 REMARK 465 ASN F 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 110 -40.98 70.83 REMARK 500 GLU A 130 44.08 -66.74 REMARK 500 LYS B 51 -39.83 -24.85 REMARK 500 ASN B 104 28.85 -145.57 REMARK 500 LEU B 110 -40.94 69.27 REMARK 500 ASN C 29 20.49 82.63 REMARK 500 ASN C 104 37.53 -147.48 REMARK 500 LEU C 110 -42.55 74.35 REMARK 500 GLU C 130 70.66 -63.09 REMARK 500 ASN D 104 36.80 -142.76 REMARK 500 LEU D 110 -40.04 72.69 REMARK 500 GLU D 130 15.28 -59.31 REMARK 500 ASN E 104 32.45 -146.73 REMARK 500 LEU E 110 -41.77 73.59 REMARK 500 GLU E 130 26.47 -62.16 REMARK 500 ASN F 104 42.43 -156.63 REMARK 500 LEU F 110 -39.75 75.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 160 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP A 161 O3B REMARK 620 2 UDP A 161 O1A 87.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 161 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP B 162 O3B REMARK 620 2 UDP B 162 O1A 78.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 162 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP C 163 O3B REMARK 620 2 UDP C 163 O1A 80.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 163 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP D 164 O1A REMARK 620 2 UDP D 164 O3B 77.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 164 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP E 165 O3B REMARK 620 2 UDP E 165 O1A 84.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 165 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP F 166 O1A REMARK 620 2 UDP F 166 O3B 73.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP B 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP C 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP D 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP E 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP F 166 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2B8P RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF ACANTHAMOEBA PLOYPHAGA MIMIVIRUS NUCLEOSIDE REMARK 900 DIPHOSPHATE KINASE REMARK 900 RELATED ID: 2B8Q RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF ACANTHAMOEBA PLOYPHAGA MIMIVIRUS NUCLEOSIDE REMARK 900 DIPHOSPHATE KINASE COMPLEXED WITH TDP DBREF 3EIC A 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3EIC B 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3EIC C 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3EIC D 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3EIC E 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3EIC F 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 SEQADV 3EIC TYR A -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS A -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS A -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC ALA A -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC GLY A 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LEU A 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC TYR B -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS B -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS B -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC ALA B -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC GLY B 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LEU B 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC TYR C -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS C -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS C -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC ALA C -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC GLY C 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LEU C 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC TYR D -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS D -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS D -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC ALA D -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC GLY D 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LEU D 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC TYR E -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS E -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS E -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC ALA E -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC GLY E 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LEU E 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC TYR F -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS F -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LYS F -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC ALA F -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC GLY F 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3EIC LEU F 1 UNP Q5UQL3 EXPRESSION TAG SEQRES 1 A 142 TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL LEU ILE SEQRES 2 A 142 LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA GLU ILE SEQRES 3 A 142 MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE VAL SER SEQRES 4 A 142 MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU ILE GLU SEQRES 5 A 142 GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR PHE ASN SEQRES 6 A 142 ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE ILE SER SEQRES 7 A 142 ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS ILE ARG SEQRES 8 A 142 ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR ILE ARG SEQRES 9 A 142 GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU ILE HIS SEQRES 10 A 142 ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU ILE SER SEQRES 11 A 142 ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP ASN SEQRES 1 B 142 TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL LEU ILE SEQRES 2 B 142 LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA GLU ILE SEQRES 3 B 142 MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE VAL SER SEQRES 4 B 142 MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU ILE GLU SEQRES 5 B 142 GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR PHE ASN SEQRES 6 B 142 ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE ILE SER SEQRES 7 B 142 ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS ILE ARG SEQRES 8 B 142 ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR ILE ARG SEQRES 9 B 142 GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU ILE HIS SEQRES 10 B 142 ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU ILE SER SEQRES 11 B 142 ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP ASN SEQRES 1 C 142 TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL LEU ILE SEQRES 2 C 142 LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA GLU ILE SEQRES 3 C 142 MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE VAL SER SEQRES 4 C 142 MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU ILE GLU SEQRES 5 C 142 GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR PHE ASN SEQRES 6 C 142 ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE ILE SER SEQRES 7 C 142 ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS ILE ARG SEQRES 8 C 142 ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR ILE ARG SEQRES 9 C 142 GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU ILE HIS SEQRES 10 C 142 ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU ILE SER SEQRES 11 C 142 ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP ASN SEQRES 1 D 142 TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL LEU ILE SEQRES 2 D 142 LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA GLU ILE SEQRES 3 D 142 MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE VAL SER SEQRES 4 D 142 MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU ILE GLU SEQRES 5 D 142 GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR PHE ASN SEQRES 6 D 142 ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE ILE SER SEQRES 7 D 142 ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS ILE ARG SEQRES 8 D 142 ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR ILE ARG SEQRES 9 D 142 GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU ILE HIS SEQRES 10 D 142 ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU ILE SER SEQRES 11 D 142 ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP ASN SEQRES 1 E 142 TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL LEU ILE SEQRES 2 E 142 LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA GLU ILE SEQRES 3 E 142 MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE VAL SER SEQRES 4 E 142 MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU ILE GLU SEQRES 5 E 142 GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR PHE ASN SEQRES 6 E 142 ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE ILE SER SEQRES 7 E 142 ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS ILE ARG SEQRES 8 E 142 ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR ILE ARG SEQRES 9 E 142 GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU ILE HIS SEQRES 10 E 142 ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU ILE SER SEQRES 11 E 142 ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP ASN SEQRES 1 F 142 TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL LEU ILE SEQRES 2 F 142 LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA GLU ILE SEQRES 3 F 142 MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE VAL SER SEQRES 4 F 142 MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU ILE GLU SEQRES 5 F 142 GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR PHE ASN SEQRES 6 F 142 ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE ILE SER SEQRES 7 F 142 ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS ILE ARG SEQRES 8 F 142 ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR ILE ARG SEQRES 9 F 142 GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU ILE HIS SEQRES 10 F 142 ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU ILE SER SEQRES 11 F 142 ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP ASN HET MG A 160 1 HET UDP A 161 25 HET MG B 161 1 HET UDP B 162 25 HET MG C 162 1 HET UDP C 163 25 HET MG D 163 1 HET UDP D 164 25 HET MG E 164 1 HET UDP E 165 25 HET MG F 165 1 HET UDP F 166 25 HETNAM MG MAGNESIUM ION HETNAM UDP URIDINE-5'-DIPHOSPHATE FORMUL 7 MG 6(MG 2+) FORMUL 8 UDP 6(C9 H14 N2 O12 P2) FORMUL 19 HOH *214(H2 O) HELIX 1 1 LYS A 9 ARG A 15 1 7 HELIX 2 2 LEU A 17 LYS A 28 1 12 HELIX 3 3 PRO A 42 TYR A 50 1 9 HELIX 4 4 LYS A 51 SER A 54 5 4 HELIX 5 5 TYR A 58 VAL A 67 1 10 HELIX 6 6 ASP A 80 GLY A 90 1 11 HELIX 7 7 THR A 97 ALA A 103 1 7 HELIX 8 8 SER A 116 PHE A 128 1 13 HELIX 9 9 LYS B 9 ARG B 15 1 7 HELIX 10 10 LEU B 17 LYS B 28 1 12 HELIX 11 11 PRO B 42 LYS B 51 1 10 HELIX 12 12 GLU B 52 SER B 54 5 3 HELIX 13 13 TYR B 58 VAL B 67 1 10 HELIX 14 14 ASP B 80 GLY B 90 1 11 HELIX 15 15 THR B 97 ALA B 103 1 7 HELIX 16 16 SER B 116 PHE B 128 1 13 HELIX 17 17 LYS C 9 ARG C 15 1 7 HELIX 18 18 LEU C 17 LYS C 28 1 12 HELIX 19 19 PRO C 42 TYR C 50 1 9 HELIX 20 20 LYS C 51 SER C 54 5 4 HELIX 21 21 TYR C 58 VAL C 67 1 10 HELIX 22 22 ASP C 80 GLY C 90 1 11 HELIX 23 23 THR C 97 ALA C 103 1 7 HELIX 24 24 SER C 116 PHE C 128 1 13 HELIX 25 25 LYS D 9 ARG D 15 1 7 HELIX 26 26 LEU D 17 LYS D 28 1 12 HELIX 27 27 PRO D 42 TYR D 50 1 9 HELIX 28 28 LYS D 51 SER D 54 5 4 HELIX 29 29 TYR D 58 SER D 68 1 11 HELIX 30 30 ASP D 80 GLY D 90 1 11 HELIX 31 31 THR D 97 ALA D 103 1 7 HELIX 32 32 SER D 116 PHE D 128 1 13 HELIX 33 33 LYS E 9 ARG E 15 1 7 HELIX 34 34 LEU E 17 LYS E 27 1 11 HELIX 35 35 PRO E 42 TYR E 50 1 9 HELIX 36 36 LYS E 51 SER E 54 5 4 HELIX 37 37 TYR E 58 SER E 68 1 11 HELIX 38 38 ASP E 80 GLY E 90 1 11 HELIX 39 39 THR E 97 ALA E 103 1 7 HELIX 40 40 SER E 116 PHE E 128 1 13 HELIX 41 41 LYS F 9 ARG F 15 1 7 HELIX 42 42 LEU F 17 LYS F 28 1 12 HELIX 43 43 PRO F 42 TYR F 50 1 9 HELIX 44 44 LYS F 51 GLN F 56 5 6 HELIX 45 45 TYR F 58 MET F 66 1 9 HELIX 46 46 ASP F 80 GLY F 90 1 11 HELIX 47 47 THR F 97 ALA F 103 1 7 HELIX 48 48 SER F 116 PHE F 128 1 13 SHEET 1 A 4 LYS A 31 TRP A 38 0 SHEET 2 A 4 ILE A 71 THR A 79 -1 O VAL A 75 N VAL A 33 SHEET 3 A 4 LEU A 1 ILE A 8 -1 N ILE A 8 O ILE A 72 SHEET 4 A 4 ILE A 111 ALA A 113 -1 O HIS A 112 N LEU A 7 SHEET 1 B 4 LYS B 31 TRP B 38 0 SHEET 2 B 4 ILE B 71 GLY B 78 -1 O VAL B 75 N SER B 34 SHEET 3 B 4 GLN B 2 ILE B 8 -1 N VAL B 6 O ILE B 74 SHEET 4 B 4 ILE B 111 ALA B 113 -1 O HIS B 112 N LEU B 7 SHEET 1 C 4 LYS C 31 TRP C 38 0 SHEET 2 C 4 ILE C 71 THR C 79 -1 O VAL C 75 N VAL C 33 SHEET 3 C 4 LEU C 1 ILE C 8 -1 N VAL C 6 O ILE C 74 SHEET 4 C 4 ILE C 111 ALA C 113 -1 O HIS C 112 N LEU C 7 SHEET 1 D 4 LYS D 31 TRP D 38 0 SHEET 2 D 4 ILE D 71 THR D 79 -1 O VAL D 75 N VAL D 33 SHEET 3 D 4 LEU D 1 ILE D 8 -1 N VAL D 6 O ILE D 74 SHEET 4 D 4 ILE D 111 ALA D 113 -1 O HIS D 112 N LEU D 7 SHEET 1 E 4 LYS E 31 TRP E 38 0 SHEET 2 E 4 ILE E 71 THR E 79 -1 O VAL E 75 N VAL E 33 SHEET 3 E 4 LEU E 1 ILE E 8 -1 N VAL E 6 O ILE E 74 SHEET 4 E 4 ILE E 111 ALA E 113 -1 O HIS E 112 N LEU E 7 SHEET 1 F 4 LYS F 31 TRP F 38 0 SHEET 2 F 4 ILE F 71 THR F 79 -1 O VAL F 75 N VAL F 33 SHEET 3 F 4 LEU F 1 ILE F 8 -1 N ILE F 8 O ILE F 72 SHEET 4 F 4 ILE F 111 ALA F 113 -1 O HIS F 112 N LEU F 7 LINK MG MG A 160 O3B UDP A 161 1555 1555 2.11 LINK MG MG A 160 O1A UDP A 161 1555 1555 2.00 LINK MG MG B 161 O3B UDP B 162 1555 1555 2.06 LINK MG MG B 161 O1A UDP B 162 1555 1555 2.24 LINK MG MG C 162 O3B UDP C 163 1555 1555 2.11 LINK MG MG C 162 O1A UDP C 163 1555 1555 2.16 LINK MG MG D 163 O1A UDP D 164 1555 1555 2.04 LINK MG MG D 163 O3B UDP D 164 1555 1555 2.43 LINK MG MG E 164 O3B UDP E 165 1555 1555 2.20 LINK MG MG E 164 O1A UDP E 165 1555 1555 2.04 LINK MG MG F 165 O1A UDP F 166 1555 1555 2.23 LINK MG MG F 165 O3B UDP F 166 1555 1555 2.22 SITE 1 AC1 2 ARG A 86 UDP A 161 SITE 1 AC2 2 ARG B 86 UDP B 162 SITE 1 AC3 2 ARG C 86 UDP C 163 SITE 1 AC4 1 UDP D 164 SITE 1 AC5 1 UDP E 165 SITE 1 AC6 2 ARG F 86 UDP F 166 SITE 1 AC7 13 LYS A 9 HIS A 53 TYR A 58 ASN A 62 SITE 2 AC7 13 ARG A 86 GLN A 89 ARG A 99 ILE A 106 SITE 3 AC7 13 ARG A 107 ASN A 109 MG A 160 HOH A 195 SITE 4 AC7 13 HOH A 196 SITE 1 AC8 12 LYS B 9 TYR B 50 HIS B 53 TYR B 58 SITE 2 AC8 12 ASN B 62 ARG B 86 ARG B 99 ILE B 106 SITE 3 AC8 12 ARG B 107 ASN B 109 MG B 161 HOH B 171 SITE 1 AC9 13 LYS C 9 TYR C 50 HIS C 53 TYR C 58 SITE 2 AC9 13 ASN C 62 ARG C 86 ARG C 99 ILE C 106 SITE 3 AC9 13 ARG C 107 ASN C 109 MG C 162 HOH C 188 SITE 4 AC9 13 HOH C 207 SITE 1 BC1 14 LYS D 9 TYR D 50 HIS D 53 TYR D 58 SITE 2 BC1 14 ASN D 62 ARG D 86 GLN D 89 ARG D 99 SITE 3 BC1 14 ILE D 106 ARG D 107 ASN D 109 MG D 163 SITE 4 BC1 14 HOH D 168 HOH D 198 SITE 1 BC2 12 LYS E 9 HIS E 53 TYR E 58 ASN E 62 SITE 2 BC2 12 ARG E 86 ARG E 99 ILE E 106 ARG E 107 SITE 3 BC2 12 ASN E 109 MG E 164 HOH E 171 HOH E 204 SITE 1 BC3 11 LYS F 9 HIS F 53 TYR F 58 ASN F 62 SITE 2 BC3 11 ARG F 86 ARG F 99 ILE F 106 ARG F 107 SITE 3 BC3 11 ASN F 109 MG F 165 HOH F 195 CRYST1 80.472 152.726 184.940 90.00 90.00 90.00 C 2 2 21 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012427 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006548 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005407 0.00000 CONECT 6345 6364 6370 CONECT 6346 6347 6351 6354 CONECT 6347 6346 6348 6352 CONECT 6348 6347 6349 CONECT 6349 6348 6350 6353 CONECT 6350 6349 6351 CONECT 6351 6346 6350 CONECT 6352 6347 CONECT 6353 6349 CONECT 6354 6346 6355 6359 CONECT 6355 6354 6356 6357 CONECT 6356 6355 CONECT 6357 6355 6358 6360 CONECT 6358 6357 6359 6361 CONECT 6359 6354 6358 CONECT 6360 6357 CONECT 6361 6358 6362 CONECT 6362 6361 6363 CONECT 6363 6362 6364 6365 6366 CONECT 6364 6345 6363 CONECT 6365 6363 CONECT 6366 6363 6367 CONECT 6367 6366 6368 6369 6370 CONECT 6368 6367 CONECT 6369 6367 CONECT 6370 6345 6367 CONECT 6371 6390 6396 CONECT 6372 6373 6377 6380 CONECT 6373 6372 6374 6378 CONECT 6374 6373 6375 CONECT 6375 6374 6376 6379 CONECT 6376 6375 6377 CONECT 6377 6372 6376 CONECT 6378 6373 CONECT 6379 6375 CONECT 6380 6372 6381 6385 CONECT 6381 6380 6382 6383 CONECT 6382 6381 CONECT 6383 6381 6384 6386 CONECT 6384 6383 6385 6387 CONECT 6385 6380 6384 CONECT 6386 6383 CONECT 6387 6384 6388 CONECT 6388 6387 6389 CONECT 6389 6388 6390 6391 6392 CONECT 6390 6371 6389 CONECT 6391 6389 CONECT 6392 6389 6393 CONECT 6393 6392 6394 6395 6396 CONECT 6394 6393 CONECT 6395 6393 CONECT 6396 6371 6393 CONECT 6397 6416 6422 CONECT 6398 6399 6403 6406 CONECT 6399 6398 6400 6404 CONECT 6400 6399 6401 CONECT 6401 6400 6402 6405 CONECT 6402 6401 6403 CONECT 6403 6398 6402 CONECT 6404 6399 CONECT 6405 6401 CONECT 6406 6398 6407 6411 CONECT 6407 6406 6408 6409 CONECT 6408 6407 CONECT 6409 6407 6410 6412 CONECT 6410 6409 6411 6413 CONECT 6411 6406 6410 CONECT 6412 6409 CONECT 6413 6410 6414 CONECT 6414 6413 6415 CONECT 6415 6414 6416 6417 6418 CONECT 6416 6397 6415 CONECT 6417 6415 CONECT 6418 6415 6419 CONECT 6419 6418 6420 6421 6422 CONECT 6420 6419 CONECT 6421 6419 CONECT 6422 6397 6419 CONECT 6423 6442 6448 CONECT 6424 6425 6429 6432 CONECT 6425 6424 6426 6430 CONECT 6426 6425 6427 CONECT 6427 6426 6428 6431 CONECT 6428 6427 6429 CONECT 6429 6424 6428 CONECT 6430 6425 CONECT 6431 6427 CONECT 6432 6424 6433 6437 CONECT 6433 6432 6434 6435 CONECT 6434 6433 CONECT 6435 6433 6436 6438 CONECT 6436 6435 6437 6439 CONECT 6437 6432 6436 CONECT 6438 6435 CONECT 6439 6436 6440 CONECT 6440 6439 6441 CONECT 6441 6440 6442 6443 6444 CONECT 6442 6423 6441 CONECT 6443 6441 CONECT 6444 6441 6445 CONECT 6445 6444 6446 6447 6448 CONECT 6446 6445 CONECT 6447 6445 CONECT 6448 6423 6445 CONECT 6449 6468 6474 CONECT 6450 6451 6455 6458 CONECT 6451 6450 6452 6456 CONECT 6452 6451 6453 CONECT 6453 6452 6454 6457 CONECT 6454 6453 6455 CONECT 6455 6450 6454 CONECT 6456 6451 CONECT 6457 6453 CONECT 6458 6450 6459 6463 CONECT 6459 6458 6460 6461 CONECT 6460 6459 CONECT 6461 6459 6462 6464 CONECT 6462 6461 6463 6465 CONECT 6463 6458 6462 CONECT 6464 6461 CONECT 6465 6462 6466 CONECT 6466 6465 6467 CONECT 6467 6466 6468 6469 6470 CONECT 6468 6449 6467 CONECT 6469 6467 CONECT 6470 6467 6471 CONECT 6471 6470 6472 6473 6474 CONECT 6472 6471 CONECT 6473 6471 CONECT 6474 6449 6471 CONECT 6475 6494 6500 CONECT 6476 6477 6481 6484 CONECT 6477 6476 6478 6482 CONECT 6478 6477 6479 CONECT 6479 6478 6480 6483 CONECT 6480 6479 6481 CONECT 6481 6476 6480 CONECT 6482 6477 CONECT 6483 6479 CONECT 6484 6476 6485 6489 CONECT 6485 6484 6486 6487 CONECT 6486 6485 CONECT 6487 6485 6488 6490 CONECT 6488 6487 6489 6491 CONECT 6489 6484 6488 CONECT 6490 6487 CONECT 6491 6488 6492 CONECT 6492 6491 6493 CONECT 6493 6492 6494 6495 6496 CONECT 6494 6475 6493 CONECT 6495 6493 CONECT 6496 6493 6497 CONECT 6497 6496 6498 6499 6500 CONECT 6498 6497 CONECT 6499 6497 CONECT 6500 6475 6497 MASTER 470 0 12 48 24 0 27 6 6708 6 156 66 END