data_3EK4 # _entry.id 3EK4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EK4 pdb_00003ek4 10.2210/pdb3ek4/pdb RCSB RCSB049422 ? ? WWPDB D_1000049422 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3EK7 'calcium-saturated GCaMP2 dimer' unspecified PDB 3EK8 'calcium-saturated GCaMP2 T116V/G174R monomer' unspecified PDB 3EKH 'calcium-saturated GCaMP2 T116V/K387W monomer' unspecified PDB 3EKJ . unspecified # _pdbx_database_status.entry_id 3EK4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-09-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Akerboom, J.' 1 'Velez Rivera, J.D.' 2 'Looger, L.L.' 3 'Schreiter, E.R.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design' J.Biol.Chem. 284 6455 6464 2009 JBCHA3 US 0021-9258 0071 ? 19098007 10.1074/jbc.M807657200 1 'Crystallization and preliminary X-ray characterization of the genetically encoded fluorescent calcium indicator protein GCaMP2' 'Acta Crystallogr.,Sect.F' 64 629 631 2008 ? DK 1744-3091 ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Akerboom, J.' 1 ? primary 'Rivera, J.D.' 2 ? primary 'Guilbe, M.M.' 3 ? primary 'Malave, E.C.' 4 ? primary 'Hernandez, H.H.' 5 ? primary 'Tian, L.' 6 ? primary 'Hires, S.A.' 7 ? primary 'Marvin, J.S.' 8 ? primary 'Looger, L.L.' 9 ? primary 'Schreiter, E.R.' 10 ? 1 'Rodriguez Guilbe, M.M.' 11 ? 1 'Alfaro Malave, E.C.' 12 ? 1 'Akerboom, J.' 13 ? 1 'Marvin, J.S.' 14 ? 1 'Looger, L.L.' 15 ? 1 'Schreiter, E.R.' 16 ? # _cell.entry_id 3EK4 _cell.length_a 60.498 _cell.length_b 117.260 _cell.length_c 68.801 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EK4 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Myosin light chain kinase, Green fluorescent protein, Calmodulin chimera' 50704.586 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 3 water nat water 18.015 29 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHGMASMTGGQQMGRDLYDDDDKDLATMVDSSRRKWNKTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKI RHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKGGTGGSMVS KGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTL(CRO)VQCFSRYPDHMKQ HDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEA FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHGMASMTGGQQMGRDLYDDDDKDLATMVDSSRRKWNKTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKI RHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKGGTGGSMVS KGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHD FFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFS LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN GYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 MET n 1 13 ALA n 1 14 SER n 1 15 MET n 1 16 THR n 1 17 GLY n 1 18 GLY n 1 19 GLN n 1 20 GLN n 1 21 MET n 1 22 GLY n 1 23 ARG n 1 24 ASP n 1 25 LEU n 1 26 TYR n 1 27 ASP n 1 28 ASP n 1 29 ASP n 1 30 ASP n 1 31 LYS n 1 32 ASP n 1 33 LEU n 1 34 ALA n 1 35 THR n 1 36 MET n 1 37 VAL n 1 38 ASP n 1 39 SER n 1 40 SER n 1 41 ARG n 1 42 ARG n 1 43 LYS n 1 44 TRP n 1 45 ASN n 1 46 LYS n 1 47 THR n 1 48 GLY n 1 49 HIS n 1 50 ALA n 1 51 VAL n 1 52 ARG n 1 53 ALA n 1 54 ILE n 1 55 GLY n 1 56 ARG n 1 57 LEU n 1 58 SER n 1 59 SER n 1 60 LEU n 1 61 GLU n 1 62 ASN n 1 63 VAL n 1 64 TYR n 1 65 ILE n 1 66 MET n 1 67 ALA n 1 68 ASP n 1 69 LYS n 1 70 GLN n 1 71 LYS n 1 72 ASN n 1 73 GLY n 1 74 ILE n 1 75 LYS n 1 76 ALA n 1 77 ASN n 1 78 PHE n 1 79 LYS n 1 80 ILE n 1 81 ARG n 1 82 HIS n 1 83 ASN n 1 84 ILE n 1 85 GLU n 1 86 ASP n 1 87 GLY n 1 88 GLY n 1 89 VAL n 1 90 GLN n 1 91 LEU n 1 92 ALA n 1 93 TYR n 1 94 HIS n 1 95 TYR n 1 96 GLN n 1 97 GLN n 1 98 ASN n 1 99 THR n 1 100 PRO n 1 101 ILE n 1 102 GLY n 1 103 ASP n 1 104 GLY n 1 105 PRO n 1 106 VAL n 1 107 LEU n 1 108 LEU n 1 109 PRO n 1 110 ASP n 1 111 ASN n 1 112 HIS n 1 113 TYR n 1 114 LEU n 1 115 SER n 1 116 THR n 1 117 GLN n 1 118 SER n 1 119 LYS n 1 120 LEU n 1 121 SER n 1 122 LYS n 1 123 ASP n 1 124 PRO n 1 125 ASN n 1 126 GLU n 1 127 LYS n 1 128 ARG n 1 129 ASP n 1 130 HIS n 1 131 MET n 1 132 VAL n 1 133 LEU n 1 134 LEU n 1 135 GLU n 1 136 PHE n 1 137 VAL n 1 138 THR n 1 139 ALA n 1 140 ALA n 1 141 GLY n 1 142 ILE n 1 143 THR n 1 144 LEU n 1 145 GLY n 1 146 MET n 1 147 ASP n 1 148 GLU n 1 149 LEU n 1 150 TYR n 1 151 LYS n 1 152 GLY n 1 153 GLY n 1 154 THR n 1 155 GLY n 1 156 GLY n 1 157 SER n 1 158 MET n 1 159 VAL n 1 160 SER n 1 161 LYS n 1 162 GLY n 1 163 GLU n 1 164 GLU n 1 165 LEU n 1 166 PHE n 1 167 THR n 1 168 GLY n 1 169 VAL n 1 170 VAL n 1 171 PRO n 1 172 ILE n 1 173 LEU n 1 174 VAL n 1 175 GLU n 1 176 LEU n 1 177 ASP n 1 178 GLY n 1 179 ASP n 1 180 VAL n 1 181 ASN n 1 182 GLY n 1 183 HIS n 1 184 LYS n 1 185 PHE n 1 186 SER n 1 187 VAL n 1 188 SER n 1 189 GLY n 1 190 GLU n 1 191 GLY n 1 192 GLU n 1 193 GLY n 1 194 ASP n 1 195 ALA n 1 196 THR n 1 197 TYR n 1 198 GLY n 1 199 LYS n 1 200 LEU n 1 201 THR n 1 202 LEU n 1 203 LYS n 1 204 PHE n 1 205 ILE n 1 206 CYS n 1 207 THR n 1 208 THR n 1 209 GLY n 1 210 LYS n 1 211 LEU n 1 212 PRO n 1 213 VAL n 1 214 PRO n 1 215 TRP n 1 216 PRO n 1 217 THR n 1 218 LEU n 1 219 VAL n 1 220 THR n 1 221 THR n 1 222 LEU n 1 223 CRO n 1 224 VAL n 1 225 GLN n 1 226 CYS n 1 227 PHE n 1 228 SER n 1 229 ARG n 1 230 TYR n 1 231 PRO n 1 232 ASP n 1 233 HIS n 1 234 MET n 1 235 LYS n 1 236 GLN n 1 237 HIS n 1 238 ASP n 1 239 PHE n 1 240 PHE n 1 241 LYS n 1 242 SER n 1 243 ALA n 1 244 MET n 1 245 PRO n 1 246 GLU n 1 247 GLY n 1 248 TYR n 1 249 ILE n 1 250 GLN n 1 251 GLU n 1 252 ARG n 1 253 THR n 1 254 ILE n 1 255 PHE n 1 256 PHE n 1 257 LYS n 1 258 ASP n 1 259 ASP n 1 260 GLY n 1 261 ASN n 1 262 TYR n 1 263 LYS n 1 264 THR n 1 265 ARG n 1 266 ALA n 1 267 GLU n 1 268 VAL n 1 269 LYS n 1 270 PHE n 1 271 GLU n 1 272 GLY n 1 273 ASP n 1 274 THR n 1 275 LEU n 1 276 VAL n 1 277 ASN n 1 278 ARG n 1 279 ILE n 1 280 GLU n 1 281 LEU n 1 282 LYS n 1 283 GLY n 1 284 ILE n 1 285 ASP n 1 286 PHE n 1 287 LYS n 1 288 GLU n 1 289 ASP n 1 290 GLY n 1 291 ASN n 1 292 ILE n 1 293 LEU n 1 294 GLY n 1 295 HIS n 1 296 LYS n 1 297 LEU n 1 298 GLU n 1 299 TYR n 1 300 ASN n 1 301 THR n 1 302 ARG n 1 303 ASP n 1 304 GLN n 1 305 LEU n 1 306 THR n 1 307 GLU n 1 308 GLU n 1 309 GLN n 1 310 ILE n 1 311 ALA n 1 312 GLU n 1 313 PHE n 1 314 LYS n 1 315 GLU n 1 316 ALA n 1 317 PHE n 1 318 SER n 1 319 LEU n 1 320 PHE n 1 321 ASP n 1 322 LYS n 1 323 ASP n 1 324 GLY n 1 325 ASP n 1 326 GLY n 1 327 THR n 1 328 ILE n 1 329 THR n 1 330 THR n 1 331 LYS n 1 332 GLU n 1 333 LEU n 1 334 GLY n 1 335 THR n 1 336 VAL n 1 337 MET n 1 338 ARG n 1 339 SER n 1 340 LEU n 1 341 GLY n 1 342 GLN n 1 343 ASN n 1 344 PRO n 1 345 THR n 1 346 GLU n 1 347 ALA n 1 348 GLU n 1 349 LEU n 1 350 GLN n 1 351 ASP n 1 352 MET n 1 353 ILE n 1 354 ASN n 1 355 GLU n 1 356 VAL n 1 357 ASP n 1 358 ALA n 1 359 ASP n 1 360 GLY n 1 361 ASN n 1 362 GLY n 1 363 THR n 1 364 ILE n 1 365 ASP n 1 366 PHE n 1 367 PRO n 1 368 GLU n 1 369 PHE n 1 370 LEU n 1 371 THR n 1 372 MET n 1 373 MET n 1 374 ALA n 1 375 ARG n 1 376 LYS n 1 377 MET n 1 378 LYS n 1 379 ASP n 1 380 THR n 1 381 ASP n 1 382 SER n 1 383 GLU n 1 384 GLU n 1 385 GLU n 1 386 ILE n 1 387 ARG n 1 388 GLU n 1 389 ALA n 1 390 PHE n 1 391 ARG n 1 392 VAL n 1 393 PHE n 1 394 ASP n 1 395 LYS n 1 396 ASP n 1 397 GLY n 1 398 ASN n 1 399 GLY n 1 400 TYR n 1 401 ILE n 1 402 SER n 1 403 ALA n 1 404 ALA n 1 405 GLU n 1 406 LEU n 1 407 ARG n 1 408 HIS n 1 409 VAL n 1 410 MET n 1 411 THR n 1 412 ASN n 1 413 LEU n 1 414 GLY n 1 415 GLU n 1 416 LYS n 1 417 LEU n 1 418 THR n 1 419 ASP n 1 420 GLU n 1 421 GLU n 1 422 VAL n 1 423 ASP n 1 424 GLU n 1 425 MET n 1 426 ILE n 1 427 ARG n 1 428 GLU n 1 429 ALA n 1 430 ASP n 1 431 ILE n 1 432 ASP n 1 433 GLY n 1 434 ASP n 1 435 GLY n 1 436 GLN n 1 437 VAL n 1 438 ASN n 1 439 TYR n 1 440 GLU n 1 441 GLU n 1 442 PHE n 1 443 VAL n 1 444 GLN n 1 445 MET n 1 446 MET n 1 447 THR n 1 448 ALA n 1 449 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 61 ? ? ? ? ? ? ? ? ? 'artificial gene' 32630 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pRSETA ? ? 1 2 sample 'Biological sequence' 62 151 Jellyfish ? GFP ? ? ? ? ? ? 'Aequorea victoria' 6100 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pRSETA ? ? 1 3 sample 'Biological sequence' 160 300 Jellyfish ? GFP ? ? ? ? ? ? 'Aequorea victoria' 6100 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pRSETA ? ? 1 4 sample 'Biological sequence' 303 449 Rat ? 'Calm1, Calm, Cam, Cam1, CaMI' ? ? ? ? ? ? 'Rattus norvegicus' 10116 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pRSETA ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 3EK4 3EK4 ? 1 ? 1 2 UNP GFP_AEQVI P42212 ? 1 ;NVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAG ITHGMDELYK ; 149 3 UNP GFP_AEQVI P42212 ? 1 ;SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQH DFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYN ; 2 4 UNP CALM1_RAT P0DP29 ? 1 ;DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ; 3 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EK4 A 1 ? 61 ? 3EK4 1 ? 61 ? 1 61 2 2 3EK4 A 62 ? 151 ? P42212 149 ? 238 ? 62 151 3 3 3EK4 A 160 ? 300 ? P42212 2 ? 144 ? 160 302 4 4 3EK4 A 303 ? 449 ? P0DP29 3 ? 149 ? 305 451 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 3EK4 ALA A 76 ? UNP P42212 VAL 163 'see remark 999' 76 1 2 3EK4 GLY A 88 ? UNP P42212 SER 175 'see remark 999' 88 2 2 3EK4 TYR A 93 ? UNP P42212 ASP 180 'see remark 999' 93 3 2 3EK4 LYS A 119 ? UNP P42212 ALA 206 'see remark 999' 119 4 2 3EK4 LEU A 144 ? UNP P42212 HIS 231 'see remark 999' 144 5 2 3EK4 GLY A 152 ? UNP P42212 ? ? linker 152 6 2 3EK4 GLY A 153 ? UNP P42212 ? ? linker 153 7 2 3EK4 THR A 154 ? UNP P42212 ? ? linker 154 8 2 3EK4 GLY A 155 ? UNP P42212 ? ? linker 155 9 2 3EK4 GLY A 156 ? UNP P42212 ? ? linker 156 10 2 3EK4 SER A 157 ? UNP P42212 ? ? linker 157 11 2 3EK4 MET A 158 ? UNP P42212 ? ? linker 158 12 2 3EK4 VAL A 159 ? UNP P42212 ? ? linker 159 13 3 3EK4 LEU A 222 ? UNP P42212 PHE 64 'see remark 999' 222 14 3 3EK4 CRO A 223 ? UNP P42212 SER 65 chromophore 224 15 3 3EK4 ? A ? ? UNP P42212 TYR 66 chromophore ? 16 3 3EK4 ? A ? ? UNP P42212 GLY 67 chromophore ? 17 3 3EK4 ILE A 249 ? UNP P42212 VAL 93 'see remark 999' 251 18 3 3EK4 THR A 301 ? UNP P42212 ? ? linker 303 19 3 3EK4 ARG A 302 ? UNP P42212 ? ? linker 304 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CRO 'L-peptide linking' n '{2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'PEPTIDE DERIVED CHROMOPHORE' 'C15 H17 N3 O5' 319.313 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3EK4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_percent_sol 48.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M Magnesium formate dihydrate, 15% w/v Polyethylene glycol 3,350, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-06-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal, Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3EK4 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.65 _reflns.number_obs 14650 _reflns.number_all ? _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 92.1 _reflns_shell.Rmerge_I_obs 0.279 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.2 _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3EK4 _refine.ls_number_reflns_obs 13914 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.45 _refine.ls_d_res_high 2.65 _refine.ls_percent_reflns_obs 98.27 _refine.ls_R_factor_obs 0.22511 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22229 _refine.ls_R_factor_R_free 0.27950 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 736 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.918 _refine.correlation_coeff_Fo_to_Fc_free 0.881 _refine.B_iso_mean 43.902 _refine.aniso_B[1][1] -0.69 _refine.aniso_B[2][2] -2.56 _refine.aniso_B[3][3] 3.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 3EKH' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.611 _refine.pdbx_overall_ESU_R_Free 0.339 _refine.overall_SU_ML 0.231 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.669 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2767 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 2799 _refine_hist.d_res_high 2.65 _refine_hist.d_res_low 45.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 2819 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.336 1.970 ? 3800 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.317 5.000 ? 344 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.716 25.217 ? 138 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.553 15.000 ? 504 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.016 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.075 0.200 ? 415 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 2138 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.204 0.200 ? 1129 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 1874 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.135 0.200 ? 113 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.132 0.200 ? 9 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.145 0.200 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.130 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.609 1.500 ? 1759 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.122 2.000 ? 2770 'X-RAY DIFFRACTION' ? r_scbond_it 1.526 3.000 ? 1173 'X-RAY DIFFRACTION' ? r_scangle_it 2.569 4.500 ? 1030 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.65 _refine_ls_shell.d_res_low 2.714 _refine_ls_shell.number_reflns_R_work 875 _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.percent_reflns_obs 86.57 _refine_ls_shell.R_factor_R_free 0.316 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3EK4 _struct.title 'Calcium-saturated GCaMP2 Monomer' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EK4 _struct_keywords.text ;GECI, GCaMP2, cpGFP, calmodulin, M13 peptide, Chromophore, Luminescence, Photoprotein, Methylation, Phosphoprotein, SIGNALING PROTEIN, FLUORESCENT PROTEIN ; _struct_keywords.pdbx_keywords 'FLUORESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 47 ? SER A 59 ? THR A 47 SER A 59 1 ? 13 HELX_P HELX_P2 2 LYS A 161 ? THR A 167 ? LYS A 161 THR A 167 5 ? 7 HELX_P HELX_P3 3 ALA A 195 ? TYR A 197 ? ALA A 195 TYR A 197 5 ? 3 HELX_P HELX_P4 4 PRO A 214 ? VAL A 219 ? PRO A 214 VAL A 219 5 ? 6 HELX_P HELX_P5 5 VAL A 224 ? SER A 228 ? VAL A 226 SER A 230 5 ? 5 HELX_P HELX_P6 6 PRO A 231 ? HIS A 237 ? PRO A 233 HIS A 239 5 ? 7 HELX_P HELX_P7 7 ASP A 238 ? ALA A 243 ? ASP A 240 ALA A 245 1 ? 6 HELX_P HELX_P8 8 THR A 306 ? ASP A 321 ? THR A 308 ASP A 323 1 ? 16 HELX_P HELX_P9 9 THR A 329 ? SER A 339 ? THR A 331 SER A 341 1 ? 11 HELX_P HELX_P10 10 THR A 345 ? GLU A 355 ? THR A 347 GLU A 357 1 ? 11 HELX_P HELX_P11 11 PHE A 366 ? ASP A 379 ? PHE A 368 ASP A 381 1 ? 14 HELX_P HELX_P12 12 SER A 382 ? ARG A 391 ? SER A 384 ARG A 393 1 ? 10 HELX_P HELX_P13 13 SER A 402 ? ASN A 412 ? SER A 404 ASN A 414 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 222 C ? ? ? 1_555 A CRO 223 N1 ? ? A LEU 222 A CRO 224 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale2 covale both ? A CRO 223 C3 ? ? ? 1_555 A VAL 224 N ? ? A CRO 224 A VAL 226 1_555 ? ? ? ? ? ? ? 1.331 ? ? metalc1 metalc ? ? A ASP 321 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 323 A CA 452 1_555 ? ? ? ? ? ? ? 2.108 ? ? metalc2 metalc ? ? A ASP 323 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 325 A CA 452 1_555 ? ? ? ? ? ? ? 3.167 ? ? metalc3 metalc ? ? A ASP 325 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 327 A CA 452 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc4 metalc ? ? A THR 327 O ? ? ? 1_555 B CA . CA ? ? A THR 329 A CA 452 1_555 ? ? ? ? ? ? ? 2.328 ? ? metalc5 metalc ? ? A GLU 332 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 334 A CA 452 1_555 ? ? ? ? ? ? ? 2.728 ? ? metalc6 metalc ? ? A GLU 332 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 334 A CA 452 1_555 ? ? ? ? ? ? ? 2.744 ? ? metalc7 metalc ? ? A ASP 357 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 359 A CA 453 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc8 metalc ? ? A ASP 359 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 361 A CA 453 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc9 metalc ? ? A ASP 359 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 361 A CA 453 1_555 ? ? ? ? ? ? ? 3.183 ? ? metalc10 metalc ? ? A ASN 361 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 363 A CA 453 1_555 ? ? ? ? ? ? ? 2.537 ? ? metalc11 metalc ? ? A THR 363 O ? ? ? 1_555 C CA . CA ? ? A THR 365 A CA 453 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc12 metalc ? ? A GLU 368 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 370 A CA 453 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc13 metalc ? ? A GLU 368 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 370 A CA 453 1_555 ? ? ? ? ? ? ? 2.538 ? ? metalc14 metalc ? ? A ASP 394 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 396 A CA 454 1_555 ? ? ? ? ? ? ? 2.982 ? ? metalc15 metalc ? ? A ASP 396 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 398 A CA 454 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc16 metalc ? ? A ASN 398 OD1 ? ? ? 1_555 D CA . CA ? ? A ASN 400 A CA 454 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc17 metalc ? ? A TYR 400 O ? ? ? 1_555 D CA . CA ? ? A TYR 402 A CA 454 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc18 metalc ? ? A GLU 405 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 407 A CA 454 1_555 ? ? ? ? ? ? ? 2.621 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 244 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 246 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 245 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 247 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.73 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 63 ? ALA A 67 ? VAL A 63 ALA A 67 A 2 ILE A 74 ? ASN A 83 ? ILE A 74 ASN A 83 A 3 VAL A 89 ? PRO A 100 ? VAL A 89 PRO A 100 A 4 TYR A 248 ? PHE A 256 ? TYR A 250 PHE A 258 A 5 ASN A 261 ? GLU A 271 ? ASN A 263 GLU A 273 A 6 THR A 274 ? ILE A 284 ? THR A 276 ILE A 286 A 7 VAL A 170 ? VAL A 180 ? VAL A 170 VAL A 180 A 8 HIS A 183 ? ASP A 194 ? HIS A 183 ASP A 194 A 9 LYS A 199 ? CYS A 206 ? LYS A 199 CYS A 206 A 10 HIS A 130 ? ALA A 140 ? HIS A 130 ALA A 140 A 11 HIS A 112 ? SER A 121 ? HIS A 112 SER A 121 A 12 VAL A 63 ? ALA A 67 ? VAL A 63 ALA A 67 B 1 THR A 327 ? ILE A 328 ? THR A 329 ILE A 330 B 2 ILE A 364 ? ASP A 365 ? ILE A 366 ASP A 367 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 66 ? N MET A 66 O LYS A 75 ? O LYS A 75 A 2 3 N HIS A 82 ? N HIS A 82 O GLN A 90 ? O GLN A 90 A 3 4 N GLN A 97 ? N GLN A 97 O GLU A 251 ? O GLU A 253 A 4 5 N ILE A 254 ? N ILE A 256 O TYR A 262 ? O TYR A 264 A 5 6 N GLU A 271 ? N GLU A 273 O THR A 274 ? O THR A 276 A 6 7 O GLY A 283 ? O GLY A 285 N ASP A 179 ? N ASP A 179 A 7 8 N VAL A 174 ? N VAL A 174 O GLY A 189 ? O GLY A 189 A 8 9 N ASP A 194 ? N ASP A 194 O LYS A 199 ? O LYS A 199 A 9 10 O PHE A 204 ? O PHE A 204 N MET A 131 ? N MET A 131 A 10 11 O LEU A 134 ? O LEU A 134 N LYS A 119 ? N LYS A 119 A 11 12 O LEU A 114 ? O LEU A 114 N VAL A 63 ? N VAL A 63 B 1 2 N ILE A 328 ? N ILE A 330 O ILE A 364 ? O ILE A 366 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 452 ? 5 'BINDING SITE FOR RESIDUE CA A 452' AC2 Software A CA 453 ? 6 'BINDING SITE FOR RESIDUE CA A 453' AC3 Software A CA 454 ? 5 'BINDING SITE FOR RESIDUE CA A 454' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 321 ? ASP A 323 . ? 1_555 ? 2 AC1 5 ASP A 323 ? ASP A 325 . ? 1_555 ? 3 AC1 5 ASP A 325 ? ASP A 327 . ? 1_555 ? 4 AC1 5 THR A 327 ? THR A 329 . ? 1_555 ? 5 AC1 5 GLU A 332 ? GLU A 334 . ? 1_555 ? 6 AC2 6 ASP A 357 ? ASP A 359 . ? 1_555 ? 7 AC2 6 ASP A 359 ? ASP A 361 . ? 1_555 ? 8 AC2 6 ASN A 361 ? ASN A 363 . ? 1_555 ? 9 AC2 6 THR A 363 ? THR A 365 . ? 1_555 ? 10 AC2 6 ASP A 365 ? ASP A 367 . ? 1_555 ? 11 AC2 6 GLU A 368 ? GLU A 370 . ? 1_555 ? 12 AC3 5 ASP A 394 ? ASP A 396 . ? 1_555 ? 13 AC3 5 ASP A 396 ? ASP A 398 . ? 1_555 ? 14 AC3 5 ASN A 398 ? ASN A 400 . ? 1_555 ? 15 AC3 5 TYR A 400 ? TYR A 402 . ? 1_555 ? 16 AC3 5 GLU A 405 ? GLU A 407 . ? 1_555 ? # _atom_sites.entry_id 3EK4 _atom_sites.fract_transf_matrix[1][1] 0.016529 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008528 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014535 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ARG 2 2 ? ? ? A . n A 1 3 GLY 3 3 ? ? ? A . n A 1 4 SER 4 4 ? ? ? A . n A 1 5 HIS 5 5 ? ? ? A . n A 1 6 HIS 6 6 ? ? ? A . n A 1 7 HIS 7 7 ? ? ? A . n A 1 8 HIS 8 8 ? ? ? A . n A 1 9 HIS 9 9 ? ? ? A . n A 1 10 HIS 10 10 ? ? ? A . n A 1 11 GLY 11 11 ? ? ? A . n A 1 12 MET 12 12 ? ? ? A . n A 1 13 ALA 13 13 ? ? ? A . n A 1 14 SER 14 14 ? ? ? A . n A 1 15 MET 15 15 ? ? ? A . n A 1 16 THR 16 16 ? ? ? A . n A 1 17 GLY 17 17 ? ? ? A . n A 1 18 GLY 18 18 ? ? ? A . n A 1 19 GLN 19 19 ? ? ? A . n A 1 20 GLN 20 20 ? ? ? A . n A 1 21 MET 21 21 ? ? ? A . n A 1 22 GLY 22 22 ? ? ? A . n A 1 23 ARG 23 23 ? ? ? A . n A 1 24 ASP 24 24 ? ? ? A . n A 1 25 LEU 25 25 ? ? ? A . n A 1 26 TYR 26 26 ? ? ? A . n A 1 27 ASP 27 27 ? ? ? A . n A 1 28 ASP 28 28 ? ? ? A . n A 1 29 ASP 29 29 ? ? ? A . n A 1 30 ASP 30 30 ? ? ? A . n A 1 31 LYS 31 31 ? ? ? A . n A 1 32 ASP 32 32 ? ? ? A . n A 1 33 LEU 33 33 ? ? ? A . n A 1 34 ALA 34 34 ? ? ? A . n A 1 35 THR 35 35 ? ? ? A . n A 1 36 MET 36 36 ? ? ? A . n A 1 37 VAL 37 37 ? ? ? A . n A 1 38 ASP 38 38 ? ? ? A . n A 1 39 SER 39 39 ? ? ? A . n A 1 40 SER 40 40 ? ? ? A . n A 1 41 ARG 41 41 ? ? ? A . n A 1 42 ARG 42 42 ? ? ? A . n A 1 43 LYS 43 43 ? ? ? A . n A 1 44 TRP 44 44 ? ? ? A . n A 1 45 ASN 45 45 ? ? ? A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 HIS 49 49 49 HIS HIS A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 HIS 82 82 82 HIS HIS A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 GLN 117 117 117 GLN GLN A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 HIS 130 130 130 HIS HIS A . n A 1 131 MET 131 131 131 MET MET A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 PHE 136 136 136 PHE PHE A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 GLY 145 145 ? ? ? A . n A 1 146 MET 146 146 ? ? ? A . n A 1 147 ASP 147 147 ? ? ? A . n A 1 148 GLU 148 148 ? ? ? A . n A 1 149 LEU 149 149 ? ? ? A . n A 1 150 TYR 150 150 ? ? ? A . n A 1 151 LYS 151 151 ? ? ? A . n A 1 152 GLY 152 152 ? ? ? A . n A 1 153 GLY 153 153 ? ? ? A . n A 1 154 THR 154 154 ? ? ? A . n A 1 155 GLY 155 155 ? ? ? A . n A 1 156 GLY 156 156 ? ? ? A . n A 1 157 SER 157 157 ? ? ? A . n A 1 158 MET 158 158 ? ? ? A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 SER 186 186 186 SER SER A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 TYR 197 197 197 TYR TYR A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 LYS 199 199 199 LYS LYS A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 PHE 204 204 204 PHE PHE A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 CYS 206 206 206 CYS CYS A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 LYS 210 210 210 LYS LYS A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 PRO 212 212 212 PRO PRO A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 PRO 214 214 214 PRO PRO A . n A 1 215 TRP 215 215 215 TRP TRP A . n A 1 216 PRO 216 216 216 PRO PRO A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 VAL 219 219 219 VAL VAL A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 CRO 223 224 224 CRO CRO A . n A 1 224 VAL 224 226 226 VAL VAL A . n A 1 225 GLN 225 227 227 GLN GLN A . n A 1 226 CYS 226 228 228 CYS CYS A . n A 1 227 PHE 227 229 229 PHE PHE A . n A 1 228 SER 228 230 230 SER SER A . n A 1 229 ARG 229 231 231 ARG ARG A . n A 1 230 TYR 230 232 232 TYR TYR A . n A 1 231 PRO 231 233 233 PRO PRO A . n A 1 232 ASP 232 234 234 ASP ASP A . n A 1 233 HIS 233 235 235 HIS HIS A . n A 1 234 MET 234 236 236 MET MET A . n A 1 235 LYS 235 237 237 LYS LYS A . n A 1 236 GLN 236 238 238 GLN GLN A . n A 1 237 HIS 237 239 239 HIS HIS A . n A 1 238 ASP 238 240 240 ASP ASP A . n A 1 239 PHE 239 241 241 PHE PHE A . n A 1 240 PHE 240 242 242 PHE PHE A . n A 1 241 LYS 241 243 243 LYS LYS A . n A 1 242 SER 242 244 244 SER SER A . n A 1 243 ALA 243 245 245 ALA ALA A . n A 1 244 MET 244 246 246 MET MET A . n A 1 245 PRO 245 247 247 PRO PRO A . n A 1 246 GLU 246 248 248 GLU GLU A . n A 1 247 GLY 247 249 249 GLY GLY A . n A 1 248 TYR 248 250 250 TYR TYR A . n A 1 249 ILE 249 251 251 ILE ILE A . n A 1 250 GLN 250 252 252 GLN GLN A . n A 1 251 GLU 251 253 253 GLU GLU A . n A 1 252 ARG 252 254 254 ARG ARG A . n A 1 253 THR 253 255 255 THR THR A . n A 1 254 ILE 254 256 256 ILE ILE A . n A 1 255 PHE 255 257 257 PHE PHE A . n A 1 256 PHE 256 258 258 PHE PHE A . n A 1 257 LYS 257 259 259 LYS LYS A . n A 1 258 ASP 258 260 260 ASP ASP A . n A 1 259 ASP 259 261 261 ASP ASP A . n A 1 260 GLY 260 262 262 GLY GLY A . n A 1 261 ASN 261 263 263 ASN ASN A . n A 1 262 TYR 262 264 264 TYR TYR A . n A 1 263 LYS 263 265 265 LYS LYS A . n A 1 264 THR 264 266 266 THR THR A . n A 1 265 ARG 265 267 267 ARG ARG A . n A 1 266 ALA 266 268 268 ALA ALA A . n A 1 267 GLU 267 269 269 GLU GLU A . n A 1 268 VAL 268 270 270 VAL VAL A . n A 1 269 LYS 269 271 271 LYS LYS A . n A 1 270 PHE 270 272 272 PHE PHE A . n A 1 271 GLU 271 273 273 GLU GLU A . n A 1 272 GLY 272 274 274 GLY GLY A . n A 1 273 ASP 273 275 275 ASP ASP A . n A 1 274 THR 274 276 276 THR THR A . n A 1 275 LEU 275 277 277 LEU LEU A . n A 1 276 VAL 276 278 278 VAL VAL A . n A 1 277 ASN 277 279 279 ASN ASN A . n A 1 278 ARG 278 280 280 ARG ARG A . n A 1 279 ILE 279 281 281 ILE ILE A . n A 1 280 GLU 280 282 282 GLU GLU A . n A 1 281 LEU 281 283 283 LEU LEU A . n A 1 282 LYS 282 284 284 LYS LYS A . n A 1 283 GLY 283 285 285 GLY GLY A . n A 1 284 ILE 284 286 286 ILE ILE A . n A 1 285 ASP 285 287 287 ASP ASP A . n A 1 286 PHE 286 288 288 PHE PHE A . n A 1 287 LYS 287 289 289 LYS LYS A . n A 1 288 GLU 288 290 290 GLU GLU A . n A 1 289 ASP 289 291 291 ASP ASP A . n A 1 290 GLY 290 292 292 GLY GLY A . n A 1 291 ASN 291 293 293 ASN ASN A . n A 1 292 ILE 292 294 294 ILE ILE A . n A 1 293 LEU 293 295 295 LEU LEU A . n A 1 294 GLY 294 296 296 GLY GLY A . n A 1 295 HIS 295 297 297 HIS HIS A . n A 1 296 LYS 296 298 298 LYS LYS A . n A 1 297 LEU 297 299 299 LEU LEU A . n A 1 298 GLU 298 300 300 GLU GLU A . n A 1 299 TYR 299 301 301 TYR TYR A . n A 1 300 ASN 300 302 302 ASN ASN A . n A 1 301 THR 301 303 ? ? ? A . n A 1 302 ARG 302 304 ? ? ? A . n A 1 303 ASP 303 305 ? ? ? A . n A 1 304 GLN 304 306 ? ? ? A . n A 1 305 LEU 305 307 307 LEU LEU A . n A 1 306 THR 306 308 308 THR THR A . n A 1 307 GLU 307 309 309 GLU GLU A . n A 1 308 GLU 308 310 310 GLU GLU A . n A 1 309 GLN 309 311 311 GLN GLN A . n A 1 310 ILE 310 312 312 ILE ILE A . n A 1 311 ALA 311 313 313 ALA ALA A . n A 1 312 GLU 312 314 314 GLU GLU A . n A 1 313 PHE 313 315 315 PHE PHE A . n A 1 314 LYS 314 316 316 LYS LYS A . n A 1 315 GLU 315 317 317 GLU GLU A . n A 1 316 ALA 316 318 318 ALA ALA A . n A 1 317 PHE 317 319 319 PHE PHE A . n A 1 318 SER 318 320 320 SER SER A . n A 1 319 LEU 319 321 321 LEU LEU A . n A 1 320 PHE 320 322 322 PHE PHE A . n A 1 321 ASP 321 323 323 ASP ASP A . n A 1 322 LYS 322 324 324 LYS LYS A . n A 1 323 ASP 323 325 325 ASP ASP A . n A 1 324 GLY 324 326 326 GLY GLY A . n A 1 325 ASP 325 327 327 ASP ASP A . n A 1 326 GLY 326 328 328 GLY GLY A . n A 1 327 THR 327 329 329 THR THR A . n A 1 328 ILE 328 330 330 ILE ILE A . n A 1 329 THR 329 331 331 THR THR A . n A 1 330 THR 330 332 332 THR THR A . n A 1 331 LYS 331 333 333 LYS LYS A . n A 1 332 GLU 332 334 334 GLU GLU A . n A 1 333 LEU 333 335 335 LEU LEU A . n A 1 334 GLY 334 336 336 GLY GLY A . n A 1 335 THR 335 337 337 THR THR A . n A 1 336 VAL 336 338 338 VAL VAL A . n A 1 337 MET 337 339 339 MET MET A . n A 1 338 ARG 338 340 340 ARG ARG A . n A 1 339 SER 339 341 341 SER SER A . n A 1 340 LEU 340 342 342 LEU LEU A . n A 1 341 GLY 341 343 343 GLY GLY A . n A 1 342 GLN 342 344 344 GLN GLN A . n A 1 343 ASN 343 345 345 ASN ASN A . n A 1 344 PRO 344 346 346 PRO PRO A . n A 1 345 THR 345 347 347 THR THR A . n A 1 346 GLU 346 348 348 GLU GLU A . n A 1 347 ALA 347 349 349 ALA ALA A . n A 1 348 GLU 348 350 350 GLU GLU A . n A 1 349 LEU 349 351 351 LEU LEU A . n A 1 350 GLN 350 352 352 GLN GLN A . n A 1 351 ASP 351 353 353 ASP ASP A . n A 1 352 MET 352 354 354 MET MET A . n A 1 353 ILE 353 355 355 ILE ILE A . n A 1 354 ASN 354 356 356 ASN ASN A . n A 1 355 GLU 355 357 357 GLU GLU A . n A 1 356 VAL 356 358 358 VAL VAL A . n A 1 357 ASP 357 359 359 ASP ASP A . n A 1 358 ALA 358 360 360 ALA ALA A . n A 1 359 ASP 359 361 361 ASP ASP A . n A 1 360 GLY 360 362 362 GLY GLY A . n A 1 361 ASN 361 363 363 ASN ASN A . n A 1 362 GLY 362 364 364 GLY GLY A . n A 1 363 THR 363 365 365 THR THR A . n A 1 364 ILE 364 366 366 ILE ILE A . n A 1 365 ASP 365 367 367 ASP ASP A . n A 1 366 PHE 366 368 368 PHE PHE A . n A 1 367 PRO 367 369 369 PRO PRO A . n A 1 368 GLU 368 370 370 GLU GLU A . n A 1 369 PHE 369 371 371 PHE PHE A . n A 1 370 LEU 370 372 372 LEU LEU A . n A 1 371 THR 371 373 373 THR THR A . n A 1 372 MET 372 374 374 MET MET A . n A 1 373 MET 373 375 375 MET MET A . n A 1 374 ALA 374 376 376 ALA ALA A . n A 1 375 ARG 375 377 377 ARG ARG A . n A 1 376 LYS 376 378 378 LYS LYS A . n A 1 377 MET 377 379 379 MET MET A . n A 1 378 LYS 378 380 380 LYS LYS A . n A 1 379 ASP 379 381 381 ASP ASP A . n A 1 380 THR 380 382 382 THR THR A . n A 1 381 ASP 381 383 383 ASP ASP A . n A 1 382 SER 382 384 384 SER SER A . n A 1 383 GLU 383 385 385 GLU GLU A . n A 1 384 GLU 384 386 386 GLU GLU A . n A 1 385 GLU 385 387 387 GLU GLU A . n A 1 386 ILE 386 388 388 ILE ILE A . n A 1 387 ARG 387 389 389 ARG ARG A . n A 1 388 GLU 388 390 390 GLU GLU A . n A 1 389 ALA 389 391 391 ALA ALA A . n A 1 390 PHE 390 392 392 PHE PHE A . n A 1 391 ARG 391 393 393 ARG ARG A . n A 1 392 VAL 392 394 394 VAL VAL A . n A 1 393 PHE 393 395 395 PHE PHE A . n A 1 394 ASP 394 396 396 ASP ASP A . n A 1 395 LYS 395 397 397 LYS LYS A . n A 1 396 ASP 396 398 398 ASP ASP A . n A 1 397 GLY 397 399 399 GLY GLY A . n A 1 398 ASN 398 400 400 ASN ASN A . n A 1 399 GLY 399 401 401 GLY GLY A . n A 1 400 TYR 400 402 402 TYR TYR A . n A 1 401 ILE 401 403 403 ILE ILE A . n A 1 402 SER 402 404 404 SER SER A . n A 1 403 ALA 403 405 405 ALA ALA A . n A 1 404 ALA 404 406 406 ALA ALA A . n A 1 405 GLU 405 407 407 GLU GLU A . n A 1 406 LEU 406 408 408 LEU LEU A . n A 1 407 ARG 407 409 409 ARG ARG A . n A 1 408 HIS 408 410 410 HIS HIS A . n A 1 409 VAL 409 411 411 VAL VAL A . n A 1 410 MET 410 412 412 MET MET A . n A 1 411 THR 411 413 413 THR THR A . n A 1 412 ASN 412 414 414 ASN ASN A . n A 1 413 LEU 413 415 ? ? ? A . n A 1 414 GLY 414 416 ? ? ? A . n A 1 415 GLU 415 417 ? ? ? A . n A 1 416 LYS 416 418 ? ? ? A . n A 1 417 LEU 417 419 ? ? ? A . n A 1 418 THR 418 420 ? ? ? A . n A 1 419 ASP 419 421 ? ? ? A . n A 1 420 GLU 420 422 ? ? ? A . n A 1 421 GLU 421 423 ? ? ? A . n A 1 422 VAL 422 424 ? ? ? A . n A 1 423 ASP 423 425 ? ? ? A . n A 1 424 GLU 424 426 ? ? ? A . n A 1 425 MET 425 427 ? ? ? A . n A 1 426 ILE 426 428 ? ? ? A . n A 1 427 ARG 427 429 ? ? ? A . n A 1 428 GLU 428 430 ? ? ? A . n A 1 429 ALA 429 431 ? ? ? A . n A 1 430 ASP 430 432 ? ? ? A . n A 1 431 ILE 431 433 ? ? ? A . n A 1 432 ASP 432 434 ? ? ? A . n A 1 433 GLY 433 435 ? ? ? A . n A 1 434 ASP 434 436 ? ? ? A . n A 1 435 GLY 435 437 ? ? ? A . n A 1 436 GLN 436 438 ? ? ? A . n A 1 437 VAL 437 439 ? ? ? A . n A 1 438 ASN 438 440 ? ? ? A . n A 1 439 TYR 439 441 ? ? ? A . n A 1 440 GLU 440 442 ? ? ? A . n A 1 441 GLU 441 443 ? ? ? A . n A 1 442 PHE 442 444 ? ? ? A . n A 1 443 VAL 443 445 ? ? ? A . n A 1 444 GLN 444 446 ? ? ? A . n A 1 445 MET 445 447 ? ? ? A . n A 1 446 MET 446 448 ? ? ? A . n A 1 447 THR 447 449 ? ? ? A . n A 1 448 ALA 448 450 ? ? ? A . n A 1 449 LYS 449 451 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 452 1 CA CA A . C 2 CA 1 453 2 CA CA A . D 2 CA 1 454 3 CA CA A . E 3 HOH 1 455 1 HOH HOH A . E 3 HOH 2 456 2 HOH HOH A . E 3 HOH 3 457 3 HOH HOH A . E 3 HOH 4 458 4 HOH HOH A . E 3 HOH 5 459 5 HOH HOH A . E 3 HOH 6 460 6 HOH HOH A . E 3 HOH 7 461 7 HOH HOH A . E 3 HOH 8 462 8 HOH HOH A . E 3 HOH 9 463 9 HOH HOH A . E 3 HOH 10 464 10 HOH HOH A . E 3 HOH 11 465 11 HOH HOH A . E 3 HOH 12 466 12 HOH HOH A . E 3 HOH 13 467 13 HOH HOH A . E 3 HOH 14 468 14 HOH HOH A . E 3 HOH 15 469 15 HOH HOH A . E 3 HOH 16 470 16 HOH HOH A . E 3 HOH 17 471 17 HOH HOH A . E 3 HOH 18 472 18 HOH HOH A . E 3 HOH 19 473 19 HOH HOH A . E 3 HOH 20 474 20 HOH HOH A . E 3 HOH 21 475 21 HOH HOH A . E 3 HOH 22 476 22 HOH HOH A . E 3 HOH 23 477 23 HOH HOH A . E 3 HOH 24 478 24 HOH HOH A . E 3 HOH 25 479 25 HOH HOH A . E 3 HOH 26 480 26 HOH HOH A . E 3 HOH 27 481 27 HOH HOH A . E 3 HOH 28 482 28 HOH HOH A . E 3 HOH 29 483 29 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CRO _pdbx_struct_mod_residue.label_seq_id 223 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CRO _pdbx_struct_mod_residue.auth_seq_id 224 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id SER _pdbx_struct_mod_residue.details chromophore # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 321 ? A ASP 323 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OD1 ? A ASP 323 ? A ASP 325 ? 1_555 89.5 ? 2 OD1 ? A ASP 321 ? A ASP 323 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OD1 ? A ASP 325 ? A ASP 327 ? 1_555 98.7 ? 3 OD1 ? A ASP 323 ? A ASP 325 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OD1 ? A ASP 325 ? A ASP 327 ? 1_555 69.6 ? 4 OD1 ? A ASP 321 ? A ASP 323 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 O ? A THR 327 ? A THR 329 ? 1_555 87.1 ? 5 OD1 ? A ASP 323 ? A ASP 325 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 O ? A THR 327 ? A THR 329 ? 1_555 153.0 ? 6 OD1 ? A ASP 325 ? A ASP 327 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 O ? A THR 327 ? A THR 329 ? 1_555 84.4 ? 7 OD1 ? A ASP 321 ? A ASP 323 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE1 ? A GLU 332 ? A GLU 334 ? 1_555 80.6 ? 8 OD1 ? A ASP 323 ? A ASP 325 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE1 ? A GLU 332 ? A GLU 334 ? 1_555 90.8 ? 9 OD1 ? A ASP 325 ? A ASP 327 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE1 ? A GLU 332 ? A GLU 334 ? 1_555 160.4 ? 10 O ? A THR 327 ? A THR 329 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE1 ? A GLU 332 ? A GLU 334 ? 1_555 115.0 ? 11 OD1 ? A ASP 321 ? A ASP 323 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE2 ? A GLU 332 ? A GLU 334 ? 1_555 117.0 ? 12 OD1 ? A ASP 323 ? A ASP 325 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE2 ? A GLU 332 ? A GLU 334 ? 1_555 118.8 ? 13 OD1 ? A ASP 325 ? A ASP 327 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE2 ? A GLU 332 ? A GLU 334 ? 1_555 142.6 ? 14 O ? A THR 327 ? A THR 329 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE2 ? A GLU 332 ? A GLU 334 ? 1_555 86.3 ? 15 OE1 ? A GLU 332 ? A GLU 334 ? 1_555 CA ? B CA . ? A CA 452 ? 1_555 OE2 ? A GLU 332 ? A GLU 334 ? 1_555 47.5 ? 16 OD2 ? A ASP 357 ? A ASP 359 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OD1 ? A ASP 359 ? A ASP 361 ? 1_555 84.2 ? 17 OD2 ? A ASP 357 ? A ASP 359 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OD2 ? A ASP 359 ? A ASP 361 ? 1_555 126.3 ? 18 OD1 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OD2 ? A ASP 359 ? A ASP 361 ? 1_555 43.9 ? 19 OD2 ? A ASP 357 ? A ASP 359 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OD1 ? A ASN 361 ? A ASN 363 ? 1_555 89.2 ? 20 OD1 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OD1 ? A ASN 361 ? A ASN 363 ? 1_555 74.7 ? 21 OD2 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OD1 ? A ASN 361 ? A ASN 363 ? 1_555 88.7 ? 22 OD2 ? A ASP 357 ? A ASP 359 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 O ? A THR 363 ? A THR 365 ? 1_555 73.9 ? 23 OD1 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 O ? A THR 363 ? A THR 365 ? 1_555 142.0 ? 24 OD2 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 O ? A THR 363 ? A THR 365 ? 1_555 154.0 ? 25 OD1 ? A ASN 361 ? A ASN 363 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 O ? A THR 363 ? A THR 365 ? 1_555 74.3 ? 26 OD2 ? A ASP 357 ? A ASP 359 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE1 ? A GLU 368 ? A GLU 370 ? 1_555 89.7 ? 27 OD1 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE1 ? A GLU 368 ? A GLU 370 ? 1_555 134.0 ? 28 OD2 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE1 ? A GLU 368 ? A GLU 370 ? 1_555 114.9 ? 29 OD1 ? A ASN 361 ? A ASN 363 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE1 ? A GLU 368 ? A GLU 370 ? 1_555 151.0 ? 30 O ? A THR 363 ? A THR 365 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE1 ? A GLU 368 ? A GLU 370 ? 1_555 77.5 ? 31 OD2 ? A ASP 357 ? A ASP 359 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE2 ? A GLU 368 ? A GLU 370 ? 1_555 86.9 ? 32 OD1 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE2 ? A GLU 368 ? A GLU 370 ? 1_555 79.8 ? 33 OD2 ? A ASP 359 ? A ASP 361 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE2 ? A GLU 368 ? A GLU 370 ? 1_555 73.6 ? 34 OD1 ? A ASN 361 ? A ASN 363 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE2 ? A GLU 368 ? A GLU 370 ? 1_555 154.5 ? 35 O ? A THR 363 ? A THR 365 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE2 ? A GLU 368 ? A GLU 370 ? 1_555 128.3 ? 36 OE1 ? A GLU 368 ? A GLU 370 ? 1_555 CA ? C CA . ? A CA 453 ? 1_555 OE2 ? A GLU 368 ? A GLU 370 ? 1_555 54.3 ? 37 OD2 ? A ASP 394 ? A ASP 396 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OD2 ? A ASP 396 ? A ASP 398 ? 1_555 55.2 ? 38 OD2 ? A ASP 394 ? A ASP 396 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OD1 ? A ASN 398 ? A ASN 400 ? 1_555 67.0 ? 39 OD2 ? A ASP 396 ? A ASP 398 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OD1 ? A ASN 398 ? A ASN 400 ? 1_555 66.8 ? 40 OD2 ? A ASP 394 ? A ASP 396 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 O ? A TYR 400 ? A TYR 402 ? 1_555 102.4 ? 41 OD2 ? A ASP 396 ? A ASP 398 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 O ? A TYR 400 ? A TYR 402 ? 1_555 134.6 ? 42 OD1 ? A ASN 398 ? A ASN 400 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 O ? A TYR 400 ? A TYR 402 ? 1_555 68.0 ? 43 OD2 ? A ASP 394 ? A ASP 396 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OE2 ? A GLU 405 ? A GLU 407 ? 1_555 77.0 ? 44 OD2 ? A ASP 396 ? A ASP 398 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OE2 ? A GLU 405 ? A GLU 407 ? 1_555 102.6 ? 45 OD1 ? A ASN 398 ? A ASN 400 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OE2 ? A GLU 405 ? A GLU 407 ? 1_555 141.9 ? 46 O ? A TYR 400 ? A TYR 402 ? 1_555 CA ? D CA . ? A CA 454 ? 1_555 OE2 ? A GLU 405 ? A GLU 407 ? 1_555 110.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-10-31 4 'Structure model' 1 3 2013-10-16 5 'Structure model' 1 4 2017-06-28 6 'Structure model' 1 5 2017-10-25 7 'Structure model' 1 6 2023-08-30 8 'Structure model' 1 7 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Source and taxonomy' 6 6 'Structure model' 'Refinement description' 7 7 'Structure model' 'Data collection' 8 7 'Structure model' 'Database references' 9 7 'Structure model' 'Derived calculations' 10 7 'Structure model' 'Refinement description' 11 8 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' entity_src_gen 2 5 'Structure model' struct_ref 3 5 'Structure model' struct_ref_seq 4 5 'Structure model' struct_ref_seq_dif 5 6 'Structure model' software 6 7 'Structure model' chem_comp_atom 7 7 'Structure model' chem_comp_bond 8 7 'Structure model' database_2 9 7 'Structure model' pdbx_initial_refinement_model 10 7 'Structure model' pdbx_struct_conn_angle 11 7 'Structure model' struct_conn 12 7 'Structure model' struct_site 13 8 'Structure model' chem_comp_atom 14 8 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_struct_ref.db_code' 2 5 'Structure model' '_struct_ref.pdbx_db_accession' 3 5 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 4 5 'Structure model' '_struct_ref_seq.pdbx_db_accession' 5 7 'Structure model' '_database_2.pdbx_DOI' 6 7 'Structure model' '_database_2.pdbx_database_accession' 7 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 7 'Structure model' '_pdbx_struct_conn_angle.value' 18 7 'Structure model' '_struct_conn.pdbx_dist_value' 19 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 7 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 7 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 7 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 7 'Structure model' '_struct_site.pdbx_auth_seq_id' 34 8 'Structure model' '_chem_comp_atom.atom_id' 35 8 'Structure model' '_chem_comp_bond.atom_id_2' # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 BOS . ? ? ? ? 'data collection' ? ? ? 6 # _pdbx_entry_details.sequence_details ;RESIDUE SER65 HAS BEEN MUTATED TO GLY. RESIDUES GLY65, TYR66, AND GLY67 CONSTITUTE THE CHROMOPHORE CRO. THE AUTHOR STATES THAT ANY DIFFERENCES WITH DATABASE SEQUENCE LIKELY REPRESENT MUTATIONS INTRODUCED DURING VARIOUS ENGINEERING STEPS. ; _pdbx_entry_details.entry_id 3EK4 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 71 ? ? 179.21 155.93 2 1 ALA A 140 ? ? -161.05 -163.44 3 1 ASP A 261 ? ? -162.87 -161.53 4 1 ILE A 294 ? ? -71.84 -78.65 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ARG 2 ? A ARG 2 3 1 Y 1 A GLY 3 ? A GLY 3 4 1 Y 1 A SER 4 ? A SER 4 5 1 Y 1 A HIS 5 ? A HIS 5 6 1 Y 1 A HIS 6 ? A HIS 6 7 1 Y 1 A HIS 7 ? A HIS 7 8 1 Y 1 A HIS 8 ? A HIS 8 9 1 Y 1 A HIS 9 ? A HIS 9 10 1 Y 1 A HIS 10 ? A HIS 10 11 1 Y 1 A GLY 11 ? A GLY 11 12 1 Y 1 A MET 12 ? A MET 12 13 1 Y 1 A ALA 13 ? A ALA 13 14 1 Y 1 A SER 14 ? A SER 14 15 1 Y 1 A MET 15 ? A MET 15 16 1 Y 1 A THR 16 ? A THR 16 17 1 Y 1 A GLY 17 ? A GLY 17 18 1 Y 1 A GLY 18 ? A GLY 18 19 1 Y 1 A GLN 19 ? A GLN 19 20 1 Y 1 A GLN 20 ? A GLN 20 21 1 Y 1 A MET 21 ? A MET 21 22 1 Y 1 A GLY 22 ? A GLY 22 23 1 Y 1 A ARG 23 ? A ARG 23 24 1 Y 1 A ASP 24 ? A ASP 24 25 1 Y 1 A LEU 25 ? A LEU 25 26 1 Y 1 A TYR 26 ? A TYR 26 27 1 Y 1 A ASP 27 ? A ASP 27 28 1 Y 1 A ASP 28 ? A ASP 28 29 1 Y 1 A ASP 29 ? A ASP 29 30 1 Y 1 A ASP 30 ? A ASP 30 31 1 Y 1 A LYS 31 ? A LYS 31 32 1 Y 1 A ASP 32 ? A ASP 32 33 1 Y 1 A LEU 33 ? A LEU 33 34 1 Y 1 A ALA 34 ? A ALA 34 35 1 Y 1 A THR 35 ? A THR 35 36 1 Y 1 A MET 36 ? A MET 36 37 1 Y 1 A VAL 37 ? A VAL 37 38 1 Y 1 A ASP 38 ? A ASP 38 39 1 Y 1 A SER 39 ? A SER 39 40 1 Y 1 A SER 40 ? A SER 40 41 1 Y 1 A ARG 41 ? A ARG 41 42 1 Y 1 A ARG 42 ? A ARG 42 43 1 Y 1 A LYS 43 ? A LYS 43 44 1 Y 1 A TRP 44 ? A TRP 44 45 1 Y 1 A ASN 45 ? A ASN 45 46 1 Y 1 A GLY 145 ? A GLY 145 47 1 Y 1 A MET 146 ? A MET 146 48 1 Y 1 A ASP 147 ? A ASP 147 49 1 Y 1 A GLU 148 ? A GLU 148 50 1 Y 1 A LEU 149 ? A LEU 149 51 1 Y 1 A TYR 150 ? A TYR 150 52 1 Y 1 A LYS 151 ? A LYS 151 53 1 Y 1 A GLY 152 ? A GLY 152 54 1 Y 1 A GLY 153 ? A GLY 153 55 1 Y 1 A THR 154 ? A THR 154 56 1 Y 1 A GLY 155 ? A GLY 155 57 1 Y 1 A GLY 156 ? A GLY 156 58 1 Y 1 A SER 157 ? A SER 157 59 1 Y 1 A MET 158 ? A MET 158 60 1 Y 1 A THR 303 ? A THR 301 61 1 Y 1 A ARG 304 ? A ARG 302 62 1 Y 1 A ASP 305 ? A ASP 303 63 1 Y 1 A GLN 306 ? A GLN 304 64 1 Y 1 A LEU 415 ? A LEU 413 65 1 Y 1 A GLY 416 ? A GLY 414 66 1 Y 1 A GLU 417 ? A GLU 415 67 1 Y 1 A LYS 418 ? A LYS 416 68 1 Y 1 A LEU 419 ? A LEU 417 69 1 Y 1 A THR 420 ? A THR 418 70 1 Y 1 A ASP 421 ? A ASP 419 71 1 Y 1 A GLU 422 ? A GLU 420 72 1 Y 1 A GLU 423 ? A GLU 421 73 1 Y 1 A VAL 424 ? A VAL 422 74 1 Y 1 A ASP 425 ? A ASP 423 75 1 Y 1 A GLU 426 ? A GLU 424 76 1 Y 1 A MET 427 ? A MET 425 77 1 Y 1 A ILE 428 ? A ILE 426 78 1 Y 1 A ARG 429 ? A ARG 427 79 1 Y 1 A GLU 430 ? A GLU 428 80 1 Y 1 A ALA 431 ? A ALA 429 81 1 Y 1 A ASP 432 ? A ASP 430 82 1 Y 1 A ILE 433 ? A ILE 431 83 1 Y 1 A ASP 434 ? A ASP 432 84 1 Y 1 A GLY 435 ? A GLY 433 85 1 Y 1 A ASP 436 ? A ASP 434 86 1 Y 1 A GLY 437 ? A GLY 435 87 1 Y 1 A GLN 438 ? A GLN 436 88 1 Y 1 A VAL 439 ? A VAL 437 89 1 Y 1 A ASN 440 ? A ASN 438 90 1 Y 1 A TYR 441 ? A TYR 439 91 1 Y 1 A GLU 442 ? A GLU 440 92 1 Y 1 A GLU 443 ? A GLU 441 93 1 Y 1 A PHE 444 ? A PHE 442 94 1 Y 1 A VAL 445 ? A VAL 443 95 1 Y 1 A GLN 446 ? A GLN 444 96 1 Y 1 A MET 447 ? A MET 445 97 1 Y 1 A MET 448 ? A MET 446 98 1 Y 1 A THR 449 ? A THR 447 99 1 Y 1 A ALA 450 ? A ALA 448 100 1 Y 1 A LYS 451 ? A LYS 449 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CRO N1 N N N 75 CRO CA1 C N R 76 CRO CB1 C N R 77 CRO CG1 C N N 78 CRO OG1 O N N 79 CRO C1 C N N 80 CRO N2 N N N 81 CRO N3 N N N 82 CRO C2 C N N 83 CRO O2 O N N 84 CRO CA2 C N N 85 CRO CA3 C N N 86 CRO C3 C N N 87 CRO O3 O N N 88 CRO CB2 C N N 89 CRO CG2 C Y N 90 CRO CD1 C Y N 91 CRO CD2 C Y N 92 CRO CE1 C Y N 93 CRO CE2 C Y N 94 CRO CZ C Y N 95 CRO OH O N N 96 CRO OXT O N N 97 CRO H H N N 98 CRO H2 H N N 99 CRO HA1 H N N 100 CRO HB1 H N N 101 CRO HG11 H N N 102 CRO HG12 H N N 103 CRO HG13 H N N 104 CRO HOG1 H N N 105 CRO HA31 H N N 106 CRO HA32 H N N 107 CRO HXT H N N 108 CRO HB2 H N N 109 CRO HD1 H N N 110 CRO HD2 H N N 111 CRO HE1 H N N 112 CRO HE2 H N N 113 CRO HOH H N N 114 CYS N N N N 115 CYS CA C N R 116 CYS C C N N 117 CYS O O N N 118 CYS CB C N N 119 CYS SG S N N 120 CYS OXT O N N 121 CYS H H N N 122 CYS H2 H N N 123 CYS HA H N N 124 CYS HB2 H N N 125 CYS HB3 H N N 126 CYS HG H N N 127 CYS HXT H N N 128 GLN N N N N 129 GLN CA C N S 130 GLN C C N N 131 GLN O O N N 132 GLN CB C N N 133 GLN CG C N N 134 GLN CD C N N 135 GLN OE1 O N N 136 GLN NE2 N N N 137 GLN OXT O N N 138 GLN H H N N 139 GLN H2 H N N 140 GLN HA H N N 141 GLN HB2 H N N 142 GLN HB3 H N N 143 GLN HG2 H N N 144 GLN HG3 H N N 145 GLN HE21 H N N 146 GLN HE22 H N N 147 GLN HXT H N N 148 GLU N N N N 149 GLU CA C N S 150 GLU C C N N 151 GLU O O N N 152 GLU CB C N N 153 GLU CG C N N 154 GLU CD C N N 155 GLU OE1 O N N 156 GLU OE2 O N N 157 GLU OXT O N N 158 GLU H H N N 159 GLU H2 H N N 160 GLU HA H N N 161 GLU HB2 H N N 162 GLU HB3 H N N 163 GLU HG2 H N N 164 GLU HG3 H N N 165 GLU HE2 H N N 166 GLU HXT H N N 167 GLY N N N N 168 GLY CA C N N 169 GLY C C N N 170 GLY O O N N 171 GLY OXT O N N 172 GLY H H N N 173 GLY H2 H N N 174 GLY HA2 H N N 175 GLY HA3 H N N 176 GLY HXT H N N 177 HIS N N N N 178 HIS CA C N S 179 HIS C C N N 180 HIS O O N N 181 HIS CB C N N 182 HIS CG C Y N 183 HIS ND1 N Y N 184 HIS CD2 C Y N 185 HIS CE1 C Y N 186 HIS NE2 N Y N 187 HIS OXT O N N 188 HIS H H N N 189 HIS H2 H N N 190 HIS HA H N N 191 HIS HB2 H N N 192 HIS HB3 H N N 193 HIS HD1 H N N 194 HIS HD2 H N N 195 HIS HE1 H N N 196 HIS HE2 H N N 197 HIS HXT H N N 198 HOH O O N N 199 HOH H1 H N N 200 HOH H2 H N N 201 ILE N N N N 202 ILE CA C N S 203 ILE C C N N 204 ILE O O N N 205 ILE CB C N S 206 ILE CG1 C N N 207 ILE CG2 C N N 208 ILE CD1 C N N 209 ILE OXT O N N 210 ILE H H N N 211 ILE H2 H N N 212 ILE HA H N N 213 ILE HB H N N 214 ILE HG12 H N N 215 ILE HG13 H N N 216 ILE HG21 H N N 217 ILE HG22 H N N 218 ILE HG23 H N N 219 ILE HD11 H N N 220 ILE HD12 H N N 221 ILE HD13 H N N 222 ILE HXT H N N 223 LEU N N N N 224 LEU CA C N S 225 LEU C C N N 226 LEU O O N N 227 LEU CB C N N 228 LEU CG C N N 229 LEU CD1 C N N 230 LEU CD2 C N N 231 LEU OXT O N N 232 LEU H H N N 233 LEU H2 H N N 234 LEU HA H N N 235 LEU HB2 H N N 236 LEU HB3 H N N 237 LEU HG H N N 238 LEU HD11 H N N 239 LEU HD12 H N N 240 LEU HD13 H N N 241 LEU HD21 H N N 242 LEU HD22 H N N 243 LEU HD23 H N N 244 LEU HXT H N N 245 LYS N N N N 246 LYS CA C N S 247 LYS C C N N 248 LYS O O N N 249 LYS CB C N N 250 LYS CG C N N 251 LYS CD C N N 252 LYS CE C N N 253 LYS NZ N N N 254 LYS OXT O N N 255 LYS H H N N 256 LYS H2 H N N 257 LYS HA H N N 258 LYS HB2 H N N 259 LYS HB3 H N N 260 LYS HG2 H N N 261 LYS HG3 H N N 262 LYS HD2 H N N 263 LYS HD3 H N N 264 LYS HE2 H N N 265 LYS HE3 H N N 266 LYS HZ1 H N N 267 LYS HZ2 H N N 268 LYS HZ3 H N N 269 LYS HXT H N N 270 MET N N N N 271 MET CA C N S 272 MET C C N N 273 MET O O N N 274 MET CB C N N 275 MET CG C N N 276 MET SD S N N 277 MET CE C N N 278 MET OXT O N N 279 MET H H N N 280 MET H2 H N N 281 MET HA H N N 282 MET HB2 H N N 283 MET HB3 H N N 284 MET HG2 H N N 285 MET HG3 H N N 286 MET HE1 H N N 287 MET HE2 H N N 288 MET HE3 H N N 289 MET HXT H N N 290 PHE N N N N 291 PHE CA C N S 292 PHE C C N N 293 PHE O O N N 294 PHE CB C N N 295 PHE CG C Y N 296 PHE CD1 C Y N 297 PHE CD2 C Y N 298 PHE CE1 C Y N 299 PHE CE2 C Y N 300 PHE CZ C Y N 301 PHE OXT O N N 302 PHE H H N N 303 PHE H2 H N N 304 PHE HA H N N 305 PHE HB2 H N N 306 PHE HB3 H N N 307 PHE HD1 H N N 308 PHE HD2 H N N 309 PHE HE1 H N N 310 PHE HE2 H N N 311 PHE HZ H N N 312 PHE HXT H N N 313 PRO N N N N 314 PRO CA C N S 315 PRO C C N N 316 PRO O O N N 317 PRO CB C N N 318 PRO CG C N N 319 PRO CD C N N 320 PRO OXT O N N 321 PRO H H N N 322 PRO HA H N N 323 PRO HB2 H N N 324 PRO HB3 H N N 325 PRO HG2 H N N 326 PRO HG3 H N N 327 PRO HD2 H N N 328 PRO HD3 H N N 329 PRO HXT H N N 330 SER N N N N 331 SER CA C N S 332 SER C C N N 333 SER O O N N 334 SER CB C N N 335 SER OG O N N 336 SER OXT O N N 337 SER H H N N 338 SER H2 H N N 339 SER HA H N N 340 SER HB2 H N N 341 SER HB3 H N N 342 SER HG H N N 343 SER HXT H N N 344 THR N N N N 345 THR CA C N S 346 THR C C N N 347 THR O O N N 348 THR CB C N R 349 THR OG1 O N N 350 THR CG2 C N N 351 THR OXT O N N 352 THR H H N N 353 THR H2 H N N 354 THR HA H N N 355 THR HB H N N 356 THR HG1 H N N 357 THR HG21 H N N 358 THR HG22 H N N 359 THR HG23 H N N 360 THR HXT H N N 361 TRP N N N N 362 TRP CA C N S 363 TRP C C N N 364 TRP O O N N 365 TRP CB C N N 366 TRP CG C Y N 367 TRP CD1 C Y N 368 TRP CD2 C Y N 369 TRP NE1 N Y N 370 TRP CE2 C Y N 371 TRP CE3 C Y N 372 TRP CZ2 C Y N 373 TRP CZ3 C Y N 374 TRP CH2 C Y N 375 TRP OXT O N N 376 TRP H H N N 377 TRP H2 H N N 378 TRP HA H N N 379 TRP HB2 H N N 380 TRP HB3 H N N 381 TRP HD1 H N N 382 TRP HE1 H N N 383 TRP HE3 H N N 384 TRP HZ2 H N N 385 TRP HZ3 H N N 386 TRP HH2 H N N 387 TRP HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 VAL N N N N 413 VAL CA C N S 414 VAL C C N N 415 VAL O O N N 416 VAL CB C N N 417 VAL CG1 C N N 418 VAL CG2 C N N 419 VAL OXT O N N 420 VAL H H N N 421 VAL H2 H N N 422 VAL HA H N N 423 VAL HB H N N 424 VAL HG11 H N N 425 VAL HG12 H N N 426 VAL HG13 H N N 427 VAL HG21 H N N 428 VAL HG22 H N N 429 VAL HG23 H N N 430 VAL HXT H N N 431 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CRO CG1 CB1 sing N N 70 CRO OG1 CB1 sing N N 71 CRO CB1 CA1 sing N N 72 CRO N1 CA1 sing N N 73 CRO OH CZ sing N N 74 CRO CE1 CZ doub Y N 75 CRO CE1 CD1 sing Y N 76 CRO CA1 C1 sing N N 77 CRO CZ CE2 sing Y N 78 CRO CD1 CG2 doub Y N 79 CRO N2 C1 doub N N 80 CRO N2 CA2 sing N N 81 CRO C1 N3 sing N N 82 CRO CE2 CD2 doub Y N 83 CRO CG2 CD2 sing Y N 84 CRO CG2 CB2 sing N N 85 CRO N3 CA3 sing N N 86 CRO N3 C2 sing N N 87 CRO CA2 CB2 doub N Z 88 CRO CA2 C2 sing N N 89 CRO CA3 C3 sing N N 90 CRO OXT C3 sing N N 91 CRO C3 O3 doub N N 92 CRO C2 O2 doub N N 93 CRO N1 H sing N N 94 CRO N1 H2 sing N N 95 CRO CA1 HA1 sing N N 96 CRO CB1 HB1 sing N N 97 CRO CG1 HG11 sing N N 98 CRO CG1 HG12 sing N N 99 CRO CG1 HG13 sing N N 100 CRO OG1 HOG1 sing N N 101 CRO CA3 HA31 sing N N 102 CRO CA3 HA32 sing N N 103 CRO OXT HXT sing N N 104 CRO CB2 HB2 sing N N 105 CRO CD1 HD1 sing N N 106 CRO CD2 HD2 sing N N 107 CRO CE1 HE1 sing N N 108 CRO CE2 HE2 sing N N 109 CRO OH HOH sing N N 110 CYS N CA sing N N 111 CYS N H sing N N 112 CYS N H2 sing N N 113 CYS CA C sing N N 114 CYS CA CB sing N N 115 CYS CA HA sing N N 116 CYS C O doub N N 117 CYS C OXT sing N N 118 CYS CB SG sing N N 119 CYS CB HB2 sing N N 120 CYS CB HB3 sing N N 121 CYS SG HG sing N N 122 CYS OXT HXT sing N N 123 GLN N CA sing N N 124 GLN N H sing N N 125 GLN N H2 sing N N 126 GLN CA C sing N N 127 GLN CA CB sing N N 128 GLN CA HA sing N N 129 GLN C O doub N N 130 GLN C OXT sing N N 131 GLN CB CG sing N N 132 GLN CB HB2 sing N N 133 GLN CB HB3 sing N N 134 GLN CG CD sing N N 135 GLN CG HG2 sing N N 136 GLN CG HG3 sing N N 137 GLN CD OE1 doub N N 138 GLN CD NE2 sing N N 139 GLN NE2 HE21 sing N N 140 GLN NE2 HE22 sing N N 141 GLN OXT HXT sing N N 142 GLU N CA sing N N 143 GLU N H sing N N 144 GLU N H2 sing N N 145 GLU CA C sing N N 146 GLU CA CB sing N N 147 GLU CA HA sing N N 148 GLU C O doub N N 149 GLU C OXT sing N N 150 GLU CB CG sing N N 151 GLU CB HB2 sing N N 152 GLU CB HB3 sing N N 153 GLU CG CD sing N N 154 GLU CG HG2 sing N N 155 GLU CG HG3 sing N N 156 GLU CD OE1 doub N N 157 GLU CD OE2 sing N N 158 GLU OE2 HE2 sing N N 159 GLU OXT HXT sing N N 160 GLY N CA sing N N 161 GLY N H sing N N 162 GLY N H2 sing N N 163 GLY CA C sing N N 164 GLY CA HA2 sing N N 165 GLY CA HA3 sing N N 166 GLY C O doub N N 167 GLY C OXT sing N N 168 GLY OXT HXT sing N N 169 HIS N CA sing N N 170 HIS N H sing N N 171 HIS N H2 sing N N 172 HIS CA C sing N N 173 HIS CA CB sing N N 174 HIS CA HA sing N N 175 HIS C O doub N N 176 HIS C OXT sing N N 177 HIS CB CG sing N N 178 HIS CB HB2 sing N N 179 HIS CB HB3 sing N N 180 HIS CG ND1 sing Y N 181 HIS CG CD2 doub Y N 182 HIS ND1 CE1 doub Y N 183 HIS ND1 HD1 sing N N 184 HIS CD2 NE2 sing Y N 185 HIS CD2 HD2 sing N N 186 HIS CE1 NE2 sing Y N 187 HIS CE1 HE1 sing N N 188 HIS NE2 HE2 sing N N 189 HIS OXT HXT sing N N 190 HOH O H1 sing N N 191 HOH O H2 sing N N 192 ILE N CA sing N N 193 ILE N H sing N N 194 ILE N H2 sing N N 195 ILE CA C sing N N 196 ILE CA CB sing N N 197 ILE CA HA sing N N 198 ILE C O doub N N 199 ILE C OXT sing N N 200 ILE CB CG1 sing N N 201 ILE CB CG2 sing N N 202 ILE CB HB sing N N 203 ILE CG1 CD1 sing N N 204 ILE CG1 HG12 sing N N 205 ILE CG1 HG13 sing N N 206 ILE CG2 HG21 sing N N 207 ILE CG2 HG22 sing N N 208 ILE CG2 HG23 sing N N 209 ILE CD1 HD11 sing N N 210 ILE CD1 HD12 sing N N 211 ILE CD1 HD13 sing N N 212 ILE OXT HXT sing N N 213 LEU N CA sing N N 214 LEU N H sing N N 215 LEU N H2 sing N N 216 LEU CA C sing N N 217 LEU CA CB sing N N 218 LEU CA HA sing N N 219 LEU C O doub N N 220 LEU C OXT sing N N 221 LEU CB CG sing N N 222 LEU CB HB2 sing N N 223 LEU CB HB3 sing N N 224 LEU CG CD1 sing N N 225 LEU CG CD2 sing N N 226 LEU CG HG sing N N 227 LEU CD1 HD11 sing N N 228 LEU CD1 HD12 sing N N 229 LEU CD1 HD13 sing N N 230 LEU CD2 HD21 sing N N 231 LEU CD2 HD22 sing N N 232 LEU CD2 HD23 sing N N 233 LEU OXT HXT sing N N 234 LYS N CA sing N N 235 LYS N H sing N N 236 LYS N H2 sing N N 237 LYS CA C sing N N 238 LYS CA CB sing N N 239 LYS CA HA sing N N 240 LYS C O doub N N 241 LYS C OXT sing N N 242 LYS CB CG sing N N 243 LYS CB HB2 sing N N 244 LYS CB HB3 sing N N 245 LYS CG CD sing N N 246 LYS CG HG2 sing N N 247 LYS CG HG3 sing N N 248 LYS CD CE sing N N 249 LYS CD HD2 sing N N 250 LYS CD HD3 sing N N 251 LYS CE NZ sing N N 252 LYS CE HE2 sing N N 253 LYS CE HE3 sing N N 254 LYS NZ HZ1 sing N N 255 LYS NZ HZ2 sing N N 256 LYS NZ HZ3 sing N N 257 LYS OXT HXT sing N N 258 MET N CA sing N N 259 MET N H sing N N 260 MET N H2 sing N N 261 MET CA C sing N N 262 MET CA CB sing N N 263 MET CA HA sing N N 264 MET C O doub N N 265 MET C OXT sing N N 266 MET CB CG sing N N 267 MET CB HB2 sing N N 268 MET CB HB3 sing N N 269 MET CG SD sing N N 270 MET CG HG2 sing N N 271 MET CG HG3 sing N N 272 MET SD CE sing N N 273 MET CE HE1 sing N N 274 MET CE HE2 sing N N 275 MET CE HE3 sing N N 276 MET OXT HXT sing N N 277 PHE N CA sing N N 278 PHE N H sing N N 279 PHE N H2 sing N N 280 PHE CA C sing N N 281 PHE CA CB sing N N 282 PHE CA HA sing N N 283 PHE C O doub N N 284 PHE C OXT sing N N 285 PHE CB CG sing N N 286 PHE CB HB2 sing N N 287 PHE CB HB3 sing N N 288 PHE CG CD1 doub Y N 289 PHE CG CD2 sing Y N 290 PHE CD1 CE1 sing Y N 291 PHE CD1 HD1 sing N N 292 PHE CD2 CE2 doub Y N 293 PHE CD2 HD2 sing N N 294 PHE CE1 CZ doub Y N 295 PHE CE1 HE1 sing N N 296 PHE CE2 CZ sing Y N 297 PHE CE2 HE2 sing N N 298 PHE CZ HZ sing N N 299 PHE OXT HXT sing N N 300 PRO N CA sing N N 301 PRO N CD sing N N 302 PRO N H sing N N 303 PRO CA C sing N N 304 PRO CA CB sing N N 305 PRO CA HA sing N N 306 PRO C O doub N N 307 PRO C OXT sing N N 308 PRO CB CG sing N N 309 PRO CB HB2 sing N N 310 PRO CB HB3 sing N N 311 PRO CG CD sing N N 312 PRO CG HG2 sing N N 313 PRO CG HG3 sing N N 314 PRO CD HD2 sing N N 315 PRO CD HD3 sing N N 316 PRO OXT HXT sing N N 317 SER N CA sing N N 318 SER N H sing N N 319 SER N H2 sing N N 320 SER CA C sing N N 321 SER CA CB sing N N 322 SER CA HA sing N N 323 SER C O doub N N 324 SER C OXT sing N N 325 SER CB OG sing N N 326 SER CB HB2 sing N N 327 SER CB HB3 sing N N 328 SER OG HG sing N N 329 SER OXT HXT sing N N 330 THR N CA sing N N 331 THR N H sing N N 332 THR N H2 sing N N 333 THR CA C sing N N 334 THR CA CB sing N N 335 THR CA HA sing N N 336 THR C O doub N N 337 THR C OXT sing N N 338 THR CB OG1 sing N N 339 THR CB CG2 sing N N 340 THR CB HB sing N N 341 THR OG1 HG1 sing N N 342 THR CG2 HG21 sing N N 343 THR CG2 HG22 sing N N 344 THR CG2 HG23 sing N N 345 THR OXT HXT sing N N 346 TRP N CA sing N N 347 TRP N H sing N N 348 TRP N H2 sing N N 349 TRP CA C sing N N 350 TRP CA CB sing N N 351 TRP CA HA sing N N 352 TRP C O doub N N 353 TRP C OXT sing N N 354 TRP CB CG sing N N 355 TRP CB HB2 sing N N 356 TRP CB HB3 sing N N 357 TRP CG CD1 doub Y N 358 TRP CG CD2 sing Y N 359 TRP CD1 NE1 sing Y N 360 TRP CD1 HD1 sing N N 361 TRP CD2 CE2 doub Y N 362 TRP CD2 CE3 sing Y N 363 TRP NE1 CE2 sing Y N 364 TRP NE1 HE1 sing N N 365 TRP CE2 CZ2 sing Y N 366 TRP CE3 CZ3 doub Y N 367 TRP CE3 HE3 sing N N 368 TRP CZ2 CH2 doub Y N 369 TRP CZ2 HZ2 sing N N 370 TRP CZ3 CH2 sing Y N 371 TRP CZ3 HZ3 sing N N 372 TRP CH2 HH2 sing N N 373 TRP OXT HXT sing N N 374 TYR N CA sing N N 375 TYR N H sing N N 376 TYR N H2 sing N N 377 TYR CA C sing N N 378 TYR CA CB sing N N 379 TYR CA HA sing N N 380 TYR C O doub N N 381 TYR C OXT sing N N 382 TYR CB CG sing N N 383 TYR CB HB2 sing N N 384 TYR CB HB3 sing N N 385 TYR CG CD1 doub Y N 386 TYR CG CD2 sing Y N 387 TYR CD1 CE1 sing Y N 388 TYR CD1 HD1 sing N N 389 TYR CD2 CE2 doub Y N 390 TYR CD2 HD2 sing N N 391 TYR CE1 CZ doub Y N 392 TYR CE1 HE1 sing N N 393 TYR CE2 CZ sing Y N 394 TYR CE2 HE2 sing N N 395 TYR CZ OH sing N N 396 TYR OH HH sing N N 397 TYR OXT HXT sing N N 398 VAL N CA sing N N 399 VAL N H sing N N 400 VAL N H2 sing N N 401 VAL CA C sing N N 402 VAL CA CB sing N N 403 VAL CA HA sing N N 404 VAL C O doub N N 405 VAL C OXT sing N N 406 VAL CB CG1 sing N N 407 VAL CB CG2 sing N N 408 VAL CB HB sing N N 409 VAL CG1 HG11 sing N N 410 VAL CG1 HG12 sing N N 411 VAL CG1 HG13 sing N N 412 VAL CG2 HG21 sing N N 413 VAL CG2 HG22 sing N N 414 VAL CG2 HG23 sing N N 415 VAL OXT HXT sing N N 416 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3EKH _pdbx_initial_refinement_model.details 'PDB entry 3EKH' #