HEADER MEMBRANE PROTEIN 22-SEP-08 3ELG TITLE CRYSTAL STRUCTURE OF A PUTATIVE PERIPLASMIC PROTEIN OF UNKNOWN TITLE 2 FUNCTION (BVU_2443) FROM BACTEROIDES VULGATUS ATCC 8482 AT 1.64 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS ATCC 8482; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 ATCC: 8482; SOURCE 5 GENE: YP_001299723.1, BVU_2443; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS BLIP-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, MEMBRANE KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 01-FEB-23 3ELG 1 REMARK SEQADV REVDAT 6 24-JUL-19 3ELG 1 REMARK LINK REVDAT 5 25-OCT-17 3ELG 1 REMARK REVDAT 4 13-JUL-11 3ELG 1 VERSN REVDAT 3 23-MAR-11 3ELG 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3ELG 1 VERSN REVDAT 1 14-OCT-08 3ELG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE PERIPLASMIC PROTEIN OF UNKNOWN JRNL TITL 2 FUNCTION (YP_001299723.1) FROM BACTEROIDES VULGATUS ATCC JRNL TITL 3 8482 AT 1.64 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 35686 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1784 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2473 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2001 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 338 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 20.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.49000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.50000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.096 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.741 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2302 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1558 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3143 ; 1.506 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3847 ; 1.401 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 5.526 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;34.123 ;25.727 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;12.723 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 6.609 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 332 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2717 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 461 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1415 ; 1.774 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 570 ; 0.546 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2322 ; 2.938 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 887 ; 4.947 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 821 ; 7.518 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9995 10.2054 8.9038 REMARK 3 T TENSOR REMARK 3 T11: -0.0431 T22: -0.0280 REMARK 3 T33: -0.0315 T12: -0.0031 REMARK 3 T13: -0.0130 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.7683 L22: 1.3105 REMARK 3 L33: 0.9140 L12: -0.6482 REMARK 3 L13: -0.3143 L23: 0.3145 REMARK 3 S TENSOR REMARK 3 S11: -0.0354 S12: -0.0237 S13: -0.0246 REMARK 3 S21: 0.0008 S22: -0.0074 S23: 0.0102 REMARK 3 S31: -0.0013 S32: 0.0875 S33: 0.0428 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 21 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): -1.6893 8.2553 -13.1102 REMARK 3 T TENSOR REMARK 3 T11: -0.0086 T22: -0.0370 REMARK 3 T33: -0.0190 T12: 0.0081 REMARK 3 T13: 0.0231 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.8799 L22: 0.8124 REMARK 3 L33: 0.8921 L12: 0.5101 REMARK 3 L13: -0.0073 L23: -0.5894 REMARK 3 S TENSOR REMARK 3 S11: 0.0921 S12: 0.0105 S13: 0.0634 REMARK 3 S21: 0.0248 S22: -0.0897 S23: -0.0774 REMARK 3 S31: -0.0481 S32: 0.0426 S33: -0.0023 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 (1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 (2). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. REMARK 3 (3). ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 (4). ONE CITRATE (CIT) ION WAS MODELED BASED ON CRYSTALLIZATION REMARK 3 AND CONCLUSIVE ELECTRON DENSITY. REMARK 3 (5). RAMACHANDRAN OUTLIERS OF LYS 87 IN BOTH A AND B SUBUNITS ARE REMARK 3 SUPPORTED BY ELECTRON DENSITY. REMARK 4 REMARK 4 3ELG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049470. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97864 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35714 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 29.775 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 5.9590 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.86500 REMARK 200 R SYM FOR SHELL (I) : 0.86500 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23.8% POLYETHYLENE GLYCOL 3000, 0.1M REMARK 280 CITRIC ACID PH 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.75350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 19 REMARK 465 GLY B 19 REMARK 465 ALA B 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 30 CE NZ REMARK 470 LYS A 47 CE NZ REMARK 470 LYS A 52 NZ REMARK 470 LYS A 55 NZ REMARK 470 LYS A 89 CE NZ REMARK 470 GLN A 98 CD OE1 NE2 REMARK 470 LYS A 105 CE NZ REMARK 470 LYS B 47 CE NZ REMARK 470 LYS B 55 NZ REMARK 470 LYS B 89 CD CE NZ REMARK 470 GLN B 98 CD OE1 NE2 REMARK 470 LYS B 102 CE NZ REMARK 470 LYS B 105 CE NZ REMARK 470 LYS B 112 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 87 -92.87 67.04 REMARK 500 SER A 145 -153.37 -147.72 REMARK 500 LYS B 87 -96.36 71.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 390186 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE THE CONSTRUCT (RESIDUES 20-146) WAS EXPRESSED WITH A REMARK 999 PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3ELG A 20 146 UNP A6L337 A6L337_BACV8 20 146 DBREF 3ELG B 20 146 UNP A6L337 A6L337_BACV8 20 146 SEQADV 3ELG GLY A 19 UNP A6L337 EXPRESSION TAG SEQADV 3ELG GLY B 19 UNP A6L337 EXPRESSION TAG SEQRES 1 A 128 GLY ALA GLY ASP VAL VAL THR ARG ASP VAL ASN LYS LEU SEQRES 2 A 128 PRO VAL ALA ALA ARG GLU MSE ILE GLY LYS HIS PHE SER SEQRES 3 A 128 GLN THR LYS VAL ALA TYR ILE LYS ILE GLU LYS ASP LEU SEQRES 4 A 128 PHE GLN THR THR SER TYR ASP VAL LYS LEU ALA ASP GLY SEQRES 5 A 128 ILE GLU LEU GLU PHE ASN SER LYS GLY GLU TRP LEU GLU SEQRES 6 A 128 ILE ASP CYS LYS ASN LYS SER VAL PRO SER THR PHE ILE SEQRES 7 A 128 PRO GLN ALA ILE SER LYS TYR MSE LYS ALA ASN TYR ASN SEQRES 8 A 128 GLY HIS LYS THR VAL LYS ILE GLU ARG ASN ARG LYS GLY SEQRES 9 A 128 TYR GLU LEU THR LEU GLU ASN GLY LEU GLU VAL ASP PHE SEQRES 10 A 128 ASP GLN PHE GLY GLY PHE LEU LYS LEU SER ASP SEQRES 1 B 128 GLY ALA GLY ASP VAL VAL THR ARG ASP VAL ASN LYS LEU SEQRES 2 B 128 PRO VAL ALA ALA ARG GLU MSE ILE GLY LYS HIS PHE SER SEQRES 3 B 128 GLN THR LYS VAL ALA TYR ILE LYS ILE GLU LYS ASP LEU SEQRES 4 B 128 PHE GLN THR THR SER TYR ASP VAL LYS LEU ALA ASP GLY SEQRES 5 B 128 ILE GLU LEU GLU PHE ASN SER LYS GLY GLU TRP LEU GLU SEQRES 6 B 128 ILE ASP CYS LYS ASN LYS SER VAL PRO SER THR PHE ILE SEQRES 7 B 128 PRO GLN ALA ILE SER LYS TYR MSE LYS ALA ASN TYR ASN SEQRES 8 B 128 GLY HIS LYS THR VAL LYS ILE GLU ARG ASN ARG LYS GLY SEQRES 9 B 128 TYR GLU LEU THR LEU GLU ASN GLY LEU GLU VAL ASP PHE SEQRES 10 B 128 ASP GLN PHE GLY GLY PHE LEU LYS LEU SER ASP MODRES 3ELG MSE A 38 MET SELENOMETHIONINE MODRES 3ELG MSE A 104 MET SELENOMETHIONINE MODRES 3ELG MSE B 38 MET SELENOMETHIONINE MODRES 3ELG MSE B 104 MET SELENOMETHIONINE HET MSE A 38 8 HET MSE A 104 8 HET MSE B 38 8 HET MSE B 104 8 HET CIT B 1 13 HETNAM MSE SELENOMETHIONINE HETNAM CIT CITRIC ACID FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 CIT C6 H8 O7 FORMUL 4 HOH *338(H2 O) HELIX 1 1 ASP A 27 LEU A 31 5 5 HELIX 2 2 PRO A 32 PHE A 43 1 12 HELIX 3 3 PRO A 92 ILE A 96 5 5 HELIX 4 4 PRO A 97 TYR A 108 1 12 HELIX 5 5 ASP B 27 LEU B 31 5 5 HELIX 6 6 PRO B 32 PHE B 43 1 12 HELIX 7 7 PRO B 92 ILE B 96 5 5 HELIX 8 8 PRO B 97 ASN B 109 1 13 SHEET 1 A 9 VAL A 23 THR A 25 0 SHEET 2 A 9 VAL A 48 LYS A 55 -1 O ILE A 53 N VAL A 23 SHEET 3 A 9 THR A 61 LEU A 67 -1 O LYS A 66 N ALA A 49 SHEET 4 A 9 GLU A 72 PHE A 75 -1 O LEU A 73 N VAL A 65 SHEET 5 A 9 TRP A 81 ASP A 85 -1 O ASP A 85 N GLU A 72 SHEET 6 A 9 THR A 113 ASN A 119 -1 O ILE A 116 N ILE A 84 SHEET 7 A 9 GLY A 122 LEU A 127 -1 O THR A 126 N LYS A 115 SHEET 8 A 9 GLU A 132 PHE A 135 -1 O VAL A 133 N LEU A 125 SHEET 9 A 9 PHE A 141 SER A 145 -1 O LEU A 142 N ASP A 134 SHEET 1 B 9 VAL B 23 THR B 25 0 SHEET 2 B 9 VAL B 48 LYS B 55 -1 O ILE B 53 N VAL B 23 SHEET 3 B 9 THR B 61 LEU B 67 -1 O ASP B 64 N LYS B 52 SHEET 4 B 9 GLU B 72 PHE B 75 -1 O LEU B 73 N VAL B 65 SHEET 5 B 9 TRP B 81 ASP B 85 -1 O LEU B 82 N GLU B 74 SHEET 6 B 9 THR B 113 ASN B 119 -1 O ILE B 116 N ILE B 84 SHEET 7 B 9 GLY B 122 LEU B 127 -1 O GLY B 122 N ASN B 119 SHEET 8 B 9 GLU B 132 PHE B 135 -1 O VAL B 133 N LEU B 125 SHEET 9 B 9 PHE B 141 SER B 145 -1 O LYS B 143 N ASP B 134 LINK C AGLU A 37 N MSE A 38 1555 1555 1.33 LINK C BGLU A 37 N MSE A 38 1555 1555 1.33 LINK C MSE A 38 N ILE A 39 1555 1555 1.33 LINK C ATYR A 103 N MSE A 104 1555 1555 1.33 LINK C BTYR A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N LYS A 105 1555 1555 1.32 LINK C GLU B 37 N MSE B 38 1555 1555 1.33 LINK C MSE B 38 N ILE B 39 1555 1555 1.32 LINK C TYR B 103 N MSE B 104 1555 1555 1.33 LINK C MSE B 104 N LYS B 105 1555 1555 1.33 SITE 1 AC1 10 THR A 60 ASN A 76 SER A 77 HOH A 208 SITE 2 AC1 10 HOH A 211 HOH A 244 HOH A 272 THR B 60 SITE 3 AC1 10 ASN B 76 SER B 77 CRYST1 40.242 73.507 53.544 90.00 108.36 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024850 0.000000 0.008249 0.00000 SCALE2 0.000000 0.013604 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019678 0.00000