data_3EMG # _entry.id 3EMG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EMG pdb_00003emg 10.2210/pdb3emg/pdb RCSB RCSB049506 ? ? WWPDB D_1000049506 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3EMG _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-09-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Ter Haar, E.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Discovery and SAR of novel 4-thiazolyl-2-phenylaminopyrimidines as potent inhibitors of spleen tyrosine kinase (SYK).' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 18 _citation.page_first 6231 _citation.page_last 6235 _citation.year 2008 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18938080 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2008.09.106 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Farmer, L.J.' 1 ? primary 'Bemis, G.' 2 ? primary 'Britt, S.D.' 3 ? primary 'Cochran, J.' 4 ? primary 'Connors, M.' 5 ? primary 'Harrington, E.M.' 6 ? primary 'Hoock, T.' 7 ? primary 'Markland, W.' 8 ? primary 'Nanthakumar, S.' 9 ? primary 'Taslimi, P.' 10 ? primary 'Ter Haar, E.' 11 ? primary 'Wang, J.' 12 ? primary 'Zhaveri, D.' 13 ? primary 'Salituro, F.G.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tyrosine-protein kinase SYK' 33708.730 1 2.7.10.2 ? 'Kinase domain: Residues 349-635' ? 2 non-polymer syn '2-{2-[(3,5-dimethylphenyl)amino]pyrimidin-4-yl}-N-[(1S)-2-hydroxy-1-methylethyl]-4-methyl-1,3-thiazole-5-carboxamide' 397.494 1 ? ? ? ? 3 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Spleen tyrosine kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSLHESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM QQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN ; _entity_poly.pdbx_seq_one_letter_code_can ;GSLHESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM QQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-{2-[(3,5-dimethylphenyl)amino]pyrimidin-4-yl}-N-[(1S)-2-hydroxy-1-methylethyl]-4-methyl-1,3-thiazole-5-carboxamide' 685 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LEU n 1 4 HIS n 1 5 GLU n 1 6 SER n 1 7 PRO n 1 8 TYR n 1 9 ALA n 1 10 ASP n 1 11 PRO n 1 12 GLU n 1 13 GLU n 1 14 ILE n 1 15 ARG n 1 16 PRO n 1 17 LYS n 1 18 GLU n 1 19 VAL n 1 20 TYR n 1 21 LEU n 1 22 ASP n 1 23 ARG n 1 24 LYS n 1 25 LEU n 1 26 LEU n 1 27 THR n 1 28 LEU n 1 29 GLU n 1 30 ASP n 1 31 LYS n 1 32 GLU n 1 33 LEU n 1 34 GLY n 1 35 SER n 1 36 GLY n 1 37 ASN n 1 38 PHE n 1 39 GLY n 1 40 THR n 1 41 VAL n 1 42 LYS n 1 43 LYS n 1 44 GLY n 1 45 TYR n 1 46 TYR n 1 47 GLN n 1 48 MET n 1 49 LYS n 1 50 LYS n 1 51 VAL n 1 52 VAL n 1 53 LYS n 1 54 THR n 1 55 VAL n 1 56 ALA n 1 57 VAL n 1 58 LYS n 1 59 ILE n 1 60 LEU n 1 61 LYS n 1 62 ASN n 1 63 GLU n 1 64 ALA n 1 65 ASN n 1 66 ASP n 1 67 PRO n 1 68 ALA n 1 69 LEU n 1 70 LYS n 1 71 ASP n 1 72 GLU n 1 73 LEU n 1 74 LEU n 1 75 ALA n 1 76 GLU n 1 77 ALA n 1 78 ASN n 1 79 VAL n 1 80 MET n 1 81 GLN n 1 82 GLN n 1 83 LEU n 1 84 ASP n 1 85 ASN n 1 86 PRO n 1 87 TYR n 1 88 ILE n 1 89 VAL n 1 90 ARG n 1 91 MET n 1 92 ILE n 1 93 GLY n 1 94 ILE n 1 95 CYS n 1 96 GLU n 1 97 ALA n 1 98 GLU n 1 99 SER n 1 100 TRP n 1 101 MET n 1 102 LEU n 1 103 VAL n 1 104 MET n 1 105 GLU n 1 106 MET n 1 107 ALA n 1 108 GLU n 1 109 LEU n 1 110 GLY n 1 111 PRO n 1 112 LEU n 1 113 ASN n 1 114 LYS n 1 115 TYR n 1 116 LEU n 1 117 GLN n 1 118 GLN n 1 119 ASN n 1 120 ARG n 1 121 HIS n 1 122 VAL n 1 123 LYS n 1 124 ASP n 1 125 LYS n 1 126 ASN n 1 127 ILE n 1 128 ILE n 1 129 GLU n 1 130 LEU n 1 131 VAL n 1 132 HIS n 1 133 GLN n 1 134 VAL n 1 135 SER n 1 136 MET n 1 137 GLY n 1 138 MET n 1 139 LYS n 1 140 TYR n 1 141 LEU n 1 142 GLU n 1 143 GLU n 1 144 SER n 1 145 ASN n 1 146 PHE n 1 147 VAL n 1 148 HIS n 1 149 ARG n 1 150 ASP n 1 151 LEU n 1 152 ALA n 1 153 ALA n 1 154 ARG n 1 155 ASN n 1 156 VAL n 1 157 LEU n 1 158 LEU n 1 159 VAL n 1 160 THR n 1 161 GLN n 1 162 HIS n 1 163 TYR n 1 164 ALA n 1 165 LYS n 1 166 ILE n 1 167 SER n 1 168 ASP n 1 169 PHE n 1 170 GLY n 1 171 LEU n 1 172 SER n 1 173 LYS n 1 174 ALA n 1 175 LEU n 1 176 ARG n 1 177 ALA n 1 178 ASP n 1 179 GLU n 1 180 ASN n 1 181 TYR n 1 182 TYR n 1 183 LYS n 1 184 ALA n 1 185 GLN n 1 186 THR n 1 187 HIS n 1 188 GLY n 1 189 LYS n 1 190 TRP n 1 191 PRO n 1 192 VAL n 1 193 LYS n 1 194 TRP n 1 195 TYR n 1 196 ALA n 1 197 PRO n 1 198 GLU n 1 199 CYS n 1 200 ILE n 1 201 ASN n 1 202 TYR n 1 203 TYR n 1 204 LYS n 1 205 PHE n 1 206 SER n 1 207 SER n 1 208 LYS n 1 209 SER n 1 210 ASP n 1 211 VAL n 1 212 TRP n 1 213 SER n 1 214 PHE n 1 215 GLY n 1 216 VAL n 1 217 LEU n 1 218 MET n 1 219 TRP n 1 220 GLU n 1 221 ALA n 1 222 PHE n 1 223 SER n 1 224 TYR n 1 225 GLY n 1 226 GLN n 1 227 LYS n 1 228 PRO n 1 229 TYR n 1 230 ARG n 1 231 GLY n 1 232 MET n 1 233 LYS n 1 234 GLY n 1 235 SER n 1 236 GLU n 1 237 VAL n 1 238 THR n 1 239 ALA n 1 240 MET n 1 241 LEU n 1 242 GLU n 1 243 LYS n 1 244 GLY n 1 245 GLU n 1 246 ARG n 1 247 MET n 1 248 GLY n 1 249 CYS n 1 250 PRO n 1 251 ALA n 1 252 GLY n 1 253 CYS n 1 254 PRO n 1 255 ARG n 1 256 GLU n 1 257 MET n 1 258 TYR n 1 259 ASP n 1 260 LEU n 1 261 MET n 1 262 ASN n 1 263 LEU n 1 264 CYS n 1 265 TRP n 1 266 THR n 1 267 TYR n 1 268 ASP n 1 269 VAL n 1 270 GLU n 1 271 ASN n 1 272 ARG n 1 273 PRO n 1 274 GLY n 1 275 PHE n 1 276 ALA n 1 277 ALA n 1 278 VAL n 1 279 GLU n 1 280 LEU n 1 281 ARG n 1 282 LEU n 1 283 ARG n 1 284 ASN n 1 285 TYR n 1 286 TYR n 1 287 TYR n 1 288 ASP n 1 289 VAL n 1 290 VAL n 1 291 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SYK _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain high-5 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell 'Insect cells' _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pBev10 Topo' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 685 non-polymer . '2-{2-[(3,5-dimethylphenyl)amino]pyrimidin-4-yl}-N-[(1S)-2-hydroxy-1-methylethyl]-4-methyl-1,3-thiazole-5-carboxamide' '2-{2-[(3,5-dimethylphenyl)amino]pyrimidin-4-yl}-N-[(2S)-1-hydroxypropan-2-yl]-4-methyl-1,3-thiazole-5-carboxamide' 'C20 H23 N5 O2 S' 397.494 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 345 ? ? ? A . n A 1 2 SER 2 346 ? ? ? A . n A 1 3 LEU 3 347 ? ? ? A . n A 1 4 HIS 4 348 ? ? ? A . n A 1 5 GLU 5 349 ? ? ? A . n A 1 6 SER 6 350 ? ? ? A . n A 1 7 PRO 7 351 ? ? ? A . n A 1 8 TYR 8 352 ? ? ? A . n A 1 9 ALA 9 353 ? ? ? A . n A 1 10 ASP 10 354 ? ? ? A . n A 1 11 PRO 11 355 ? ? ? A . n A 1 12 GLU 12 356 ? ? ? A . n A 1 13 GLU 13 357 ? ? ? A . n A 1 14 ILE 14 358 ? ? ? A . n A 1 15 ARG 15 359 ? ? ? A . n A 1 16 PRO 16 360 ? ? ? A . n A 1 17 LYS 17 361 ? ? ? A . n A 1 18 GLU 18 362 ? ? ? A . n A 1 19 VAL 19 363 ? ? ? A . n A 1 20 TYR 20 364 ? ? ? A . n A 1 21 LEU 21 365 365 LEU LEU A . n A 1 22 ASP 22 366 366 ASP ASP A . n A 1 23 ARG 23 367 367 ARG ARG A . n A 1 24 LYS 24 368 368 LYS LYS A . n A 1 25 LEU 25 369 369 LEU LEU A . n A 1 26 LEU 26 370 370 LEU LEU A . n A 1 27 THR 27 371 371 THR THR A . n A 1 28 LEU 28 372 372 LEU LEU A . n A 1 29 GLU 29 373 373 GLU GLU A . n A 1 30 ASP 30 374 374 ASP ASP A . n A 1 31 LYS 31 375 375 LYS LYS A . n A 1 32 GLU 32 376 376 GLU GLU A . n A 1 33 LEU 33 377 377 LEU LEU A . n A 1 34 GLY 34 378 378 GLY GLY A . n A 1 35 SER 35 379 379 SER SER A . n A 1 36 GLY 36 380 380 GLY GLY A . n A 1 37 ASN 37 381 381 ASN ASN A . n A 1 38 PHE 38 382 382 PHE PHE A . n A 1 39 GLY 39 383 383 GLY GLY A . n A 1 40 THR 40 384 384 THR THR A . n A 1 41 VAL 41 385 385 VAL VAL A . n A 1 42 LYS 42 386 386 LYS LYS A . n A 1 43 LYS 43 387 387 LYS LYS A . n A 1 44 GLY 44 388 388 GLY GLY A . n A 1 45 TYR 45 389 389 TYR TYR A . n A 1 46 TYR 46 390 390 TYR TYR A . n A 1 47 GLN 47 391 391 GLN GLN A . n A 1 48 MET 48 392 392 MET MET A . n A 1 49 LYS 49 393 ? ? ? A . n A 1 50 LYS 50 394 394 LYS LYS A . n A 1 51 VAL 51 395 395 VAL VAL A . n A 1 52 VAL 52 396 396 VAL VAL A . n A 1 53 LYS 53 397 397 LYS LYS A . n A 1 54 THR 54 398 398 THR THR A . n A 1 55 VAL 55 399 399 VAL VAL A . n A 1 56 ALA 56 400 400 ALA ALA A . n A 1 57 VAL 57 401 401 VAL VAL A . n A 1 58 LYS 58 402 402 LYS LYS A . n A 1 59 ILE 59 403 403 ILE ILE A . n A 1 60 LEU 60 404 404 LEU LEU A . n A 1 61 LYS 61 405 405 LYS LYS A . n A 1 62 ASN 62 406 ? ? ? A . n A 1 63 GLU 63 407 ? ? ? A . n A 1 64 ALA 64 408 ? ? ? A . n A 1 65 ASN 65 409 ? ? ? A . n A 1 66 ASP 66 410 ? ? ? A . n A 1 67 PRO 67 411 ? ? ? A . n A 1 68 ALA 68 412 ? ? ? A . n A 1 69 LEU 69 413 413 LEU LEU A . n A 1 70 LYS 70 414 414 LYS LYS A . n A 1 71 ASP 71 415 415 ASP ASP A . n A 1 72 GLU 72 416 416 GLU GLU A . n A 1 73 LEU 73 417 417 LEU LEU A . n A 1 74 LEU 74 418 418 LEU LEU A . n A 1 75 ALA 75 419 419 ALA ALA A . n A 1 76 GLU 76 420 420 GLU GLU A . n A 1 77 ALA 77 421 421 ALA ALA A . n A 1 78 ASN 78 422 422 ASN ASN A . n A 1 79 VAL 79 423 423 VAL VAL A . n A 1 80 MET 80 424 424 MET MET A . n A 1 81 GLN 81 425 425 GLN GLN A . n A 1 82 GLN 82 426 426 GLN GLN A . n A 1 83 LEU 83 427 427 LEU LEU A . n A 1 84 ASP 84 428 428 ASP ASP A . n A 1 85 ASN 85 429 429 ASN ASN A . n A 1 86 PRO 86 430 430 PRO PRO A . n A 1 87 TYR 87 431 431 TYR TYR A . n A 1 88 ILE 88 432 432 ILE ILE A . n A 1 89 VAL 89 433 433 VAL VAL A . n A 1 90 ARG 90 434 434 ARG ARG A . n A 1 91 MET 91 435 435 MET MET A . n A 1 92 ILE 92 436 436 ILE ILE A . n A 1 93 GLY 93 437 437 GLY GLY A . n A 1 94 ILE 94 438 438 ILE ILE A . n A 1 95 CYS 95 439 439 CYS CYS A . n A 1 96 GLU 96 440 440 GLU GLU A . n A 1 97 ALA 97 441 441 ALA ALA A . n A 1 98 GLU 98 442 442 GLU GLU A . n A 1 99 SER 99 443 443 SER SER A . n A 1 100 TRP 100 444 444 TRP TRP A . n A 1 101 MET 101 445 445 MET MET A . n A 1 102 LEU 102 446 446 LEU LEU A . n A 1 103 VAL 103 447 447 VAL VAL A . n A 1 104 MET 104 448 448 MET MET A . n A 1 105 GLU 105 449 449 GLU GLU A . n A 1 106 MET 106 450 450 MET MET A . n A 1 107 ALA 107 451 451 ALA ALA A . n A 1 108 GLU 108 452 452 GLU GLU A . n A 1 109 LEU 109 453 453 LEU LEU A . n A 1 110 GLY 110 454 454 GLY GLY A . n A 1 111 PRO 111 455 455 PRO PRO A . n A 1 112 LEU 112 456 456 LEU LEU A . n A 1 113 ASN 113 457 457 ASN ASN A . n A 1 114 LYS 114 458 458 LYS LYS A . n A 1 115 TYR 115 459 459 TYR TYR A . n A 1 116 LEU 116 460 460 LEU LEU A . n A 1 117 GLN 117 461 461 GLN GLN A . n A 1 118 GLN 118 462 462 GLN GLN A . n A 1 119 ASN 119 463 463 ASN ASN A . n A 1 120 ARG 120 464 464 ARG ARG A . n A 1 121 HIS 121 465 465 HIS HIS A . n A 1 122 VAL 122 466 466 VAL VAL A . n A 1 123 LYS 123 467 467 LYS LYS A . n A 1 124 ASP 124 468 468 ASP ASP A . n A 1 125 LYS 125 469 469 LYS LYS A . n A 1 126 ASN 126 470 470 ASN ASN A . n A 1 127 ILE 127 471 471 ILE ILE A . n A 1 128 ILE 128 472 472 ILE ILE A . n A 1 129 GLU 129 473 473 GLU GLU A . n A 1 130 LEU 130 474 474 LEU LEU A . n A 1 131 VAL 131 475 475 VAL VAL A . n A 1 132 HIS 132 476 476 HIS HIS A . n A 1 133 GLN 133 477 477 GLN GLN A . n A 1 134 VAL 134 478 478 VAL VAL A . n A 1 135 SER 135 479 479 SER SER A . n A 1 136 MET 136 480 480 MET MET A . n A 1 137 GLY 137 481 481 GLY GLY A . n A 1 138 MET 138 482 482 MET MET A . n A 1 139 LYS 139 483 483 LYS LYS A . n A 1 140 TYR 140 484 484 TYR TYR A . n A 1 141 LEU 141 485 485 LEU LEU A . n A 1 142 GLU 142 486 486 GLU GLU A . n A 1 143 GLU 143 487 487 GLU GLU A . n A 1 144 SER 144 488 488 SER SER A . n A 1 145 ASN 145 489 489 ASN ASN A . n A 1 146 PHE 146 490 490 PHE PHE A . n A 1 147 VAL 147 491 491 VAL VAL A . n A 1 148 HIS 148 492 492 HIS HIS A . n A 1 149 ARG 149 493 493 ARG ARG A . n A 1 150 ASP 150 494 494 ASP ASP A . n A 1 151 LEU 151 495 495 LEU LEU A . n A 1 152 ALA 152 496 496 ALA ALA A . n A 1 153 ALA 153 497 497 ALA ALA A . n A 1 154 ARG 154 498 498 ARG ARG A . n A 1 155 ASN 155 499 499 ASN ASN A . n A 1 156 VAL 156 500 500 VAL VAL A . n A 1 157 LEU 157 501 501 LEU LEU A . n A 1 158 LEU 158 502 502 LEU LEU A . n A 1 159 VAL 159 503 503 VAL VAL A . n A 1 160 THR 160 504 504 THR THR A . n A 1 161 GLN 161 505 505 GLN GLN A . n A 1 162 HIS 162 506 506 HIS HIS A . n A 1 163 TYR 163 507 507 TYR TYR A . n A 1 164 ALA 164 508 508 ALA ALA A . n A 1 165 LYS 165 509 509 LYS LYS A . n A 1 166 ILE 166 510 510 ILE ILE A . n A 1 167 SER 167 511 511 SER SER A . n A 1 168 ASP 168 512 512 ASP ASP A . n A 1 169 PHE 169 513 513 PHE PHE A . n A 1 170 GLY 170 514 514 GLY GLY A . n A 1 171 LEU 171 515 515 LEU LEU A . n A 1 172 SER 172 516 516 SER SER A . n A 1 173 LYS 173 517 517 LYS LYS A . n A 1 174 ALA 174 518 518 ALA ALA A . n A 1 175 LEU 175 519 519 LEU LEU A . n A 1 176 ARG 176 520 520 ARG ARG A . n A 1 177 ALA 177 521 521 ALA ALA A . n A 1 178 ASP 178 522 522 ASP ASP A . n A 1 179 GLU 179 523 523 GLU GLU A . n A 1 180 ASN 180 524 524 ASN ASN A . n A 1 181 TYR 181 525 525 TYR TYR A . n A 1 182 TYR 182 526 526 TYR TYR A . n A 1 183 LYS 183 527 527 LYS LYS A . n A 1 184 ALA 184 528 528 ALA ALA A . n A 1 185 GLN 185 529 ? ? ? A . n A 1 186 THR 186 530 ? ? ? A . n A 1 187 HIS 187 531 ? ? ? A . n A 1 188 GLY 188 532 ? ? ? A . n A 1 189 LYS 189 533 533 LYS LYS A . n A 1 190 TRP 190 534 534 TRP TRP A . n A 1 191 PRO 191 535 535 PRO PRO A . n A 1 192 VAL 192 536 536 VAL VAL A . n A 1 193 LYS 193 537 537 LYS LYS A . n A 1 194 TRP 194 538 538 TRP TRP A . n A 1 195 TYR 195 539 539 TYR TYR A . n A 1 196 ALA 196 540 540 ALA ALA A . n A 1 197 PRO 197 541 541 PRO PRO A . n A 1 198 GLU 198 542 542 GLU GLU A . n A 1 199 CYS 199 543 543 CYS CYS A . n A 1 200 ILE 200 544 544 ILE ILE A . n A 1 201 ASN 201 545 545 ASN ASN A . n A 1 202 TYR 202 546 546 TYR TYR A . n A 1 203 TYR 203 547 547 TYR TYR A . n A 1 204 LYS 204 548 548 LYS LYS A . n A 1 205 PHE 205 549 549 PHE PHE A . n A 1 206 SER 206 550 550 SER SER A . n A 1 207 SER 207 551 551 SER SER A . n A 1 208 LYS 208 552 552 LYS LYS A . n A 1 209 SER 209 553 553 SER SER A . n A 1 210 ASP 210 554 554 ASP ASP A . n A 1 211 VAL 211 555 555 VAL VAL A . n A 1 212 TRP 212 556 556 TRP TRP A . n A 1 213 SER 213 557 557 SER SER A . n A 1 214 PHE 214 558 558 PHE PHE A . n A 1 215 GLY 215 559 559 GLY GLY A . n A 1 216 VAL 216 560 560 VAL VAL A . n A 1 217 LEU 217 561 561 LEU LEU A . n A 1 218 MET 218 562 562 MET MET A . n A 1 219 TRP 219 563 563 TRP TRP A . n A 1 220 GLU 220 564 564 GLU GLU A . n A 1 221 ALA 221 565 565 ALA ALA A . n A 1 222 PHE 222 566 566 PHE PHE A . n A 1 223 SER 223 567 567 SER SER A . n A 1 224 TYR 224 568 568 TYR TYR A . n A 1 225 GLY 225 569 569 GLY GLY A . n A 1 226 GLN 226 570 570 GLN GLN A . n A 1 227 LYS 227 571 571 LYS LYS A . n A 1 228 PRO 228 572 572 PRO PRO A . n A 1 229 TYR 229 573 573 TYR TYR A . n A 1 230 ARG 230 574 574 ARG ARG A . n A 1 231 GLY 231 575 575 GLY GLY A . n A 1 232 MET 232 576 576 MET MET A . n A 1 233 LYS 233 577 577 LYS LYS A . n A 1 234 GLY 234 578 578 GLY GLY A . n A 1 235 SER 235 579 579 SER SER A . n A 1 236 GLU 236 580 580 GLU GLU A . n A 1 237 VAL 237 581 581 VAL VAL A . n A 1 238 THR 238 582 582 THR THR A . n A 1 239 ALA 239 583 583 ALA ALA A . n A 1 240 MET 240 584 584 MET MET A . n A 1 241 LEU 241 585 585 LEU LEU A . n A 1 242 GLU 242 586 586 GLU GLU A . n A 1 243 LYS 243 587 587 LYS LYS A . n A 1 244 GLY 244 588 588 GLY GLY A . n A 1 245 GLU 245 589 589 GLU GLU A . n A 1 246 ARG 246 590 590 ARG ARG A . n A 1 247 MET 247 591 591 MET MET A . n A 1 248 GLY 248 592 592 GLY GLY A . n A 1 249 CYS 249 593 593 CYS CYS A . n A 1 250 PRO 250 594 594 PRO PRO A . n A 1 251 ALA 251 595 595 ALA ALA A . n A 1 252 GLY 252 596 596 GLY GLY A . n A 1 253 CYS 253 597 597 CYS CYS A . n A 1 254 PRO 254 598 598 PRO PRO A . n A 1 255 ARG 255 599 599 ARG ARG A . n A 1 256 GLU 256 600 600 GLU GLU A . n A 1 257 MET 257 601 601 MET MET A . n A 1 258 TYR 258 602 602 TYR TYR A . n A 1 259 ASP 259 603 603 ASP ASP A . n A 1 260 LEU 260 604 604 LEU LEU A . n A 1 261 MET 261 605 605 MET MET A . n A 1 262 ASN 262 606 606 ASN ASN A . n A 1 263 LEU 263 607 607 LEU LEU A . n A 1 264 CYS 264 608 608 CYS CYS A . n A 1 265 TRP 265 609 609 TRP TRP A . n A 1 266 THR 266 610 610 THR THR A . n A 1 267 TYR 267 611 611 TYR TYR A . n A 1 268 ASP 268 612 612 ASP ASP A . n A 1 269 VAL 269 613 613 VAL VAL A . n A 1 270 GLU 270 614 614 GLU GLU A . n A 1 271 ASN 271 615 615 ASN ASN A . n A 1 272 ARG 272 616 616 ARG ARG A . n A 1 273 PRO 273 617 617 PRO PRO A . n A 1 274 GLY 274 618 618 GLY GLY A . n A 1 275 PHE 275 619 619 PHE PHE A . n A 1 276 ALA 276 620 620 ALA ALA A . n A 1 277 ALA 277 621 621 ALA ALA A . n A 1 278 VAL 278 622 622 VAL VAL A . n A 1 279 GLU 279 623 623 GLU GLU A . n A 1 280 LEU 280 624 624 LEU LEU A . n A 1 281 ARG 281 625 625 ARG ARG A . n A 1 282 LEU 282 626 626 LEU LEU A . n A 1 283 ARG 283 627 627 ARG ARG A . n A 1 284 ASN 284 628 628 ASN ASN A . n A 1 285 TYR 285 629 629 TYR TYR A . n A 1 286 TYR 286 630 630 TYR TYR A . n A 1 287 TYR 287 631 631 TYR TYR A . n A 1 288 ASP 288 632 ? ? ? A . n A 1 289 VAL 289 633 ? ? ? A . n A 1 290 VAL 290 634 ? ? ? A . n A 1 291 ASN 291 635 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 685 1 685 685 685 685 A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 23 23 HOH HOH A . C 3 HOH 22 24 24 HOH HOH A . C 3 HOH 23 25 25 HOH HOH A . C 3 HOH 24 103 103 HOH HOH A . C 3 HOH 25 104 104 HOH HOH A . C 3 HOH 26 105 105 HOH HOH A . C 3 HOH 27 106 106 HOH HOH A . C 3 HOH 28 107 107 HOH HOH A . C 3 HOH 29 108 108 HOH HOH A . C 3 HOH 30 109 109 HOH HOH A . C 3 HOH 31 110 110 HOH HOH A . C 3 HOH 32 111 111 HOH HOH A . C 3 HOH 33 112 112 HOH HOH A . C 3 HOH 34 113 113 HOH HOH A . C 3 HOH 35 114 114 HOH HOH A . C 3 HOH 36 115 115 HOH HOH A . C 3 HOH 37 116 116 HOH HOH A . C 3 HOH 38 117 117 HOH HOH A . C 3 HOH 39 118 118 HOH HOH A . C 3 HOH 40 119 119 HOH HOH A . C 3 HOH 41 120 120 HOH HOH A . C 3 HOH 42 121 121 HOH HOH A . C 3 HOH 43 122 122 HOH HOH A . C 3 HOH 44 123 123 HOH HOH A . C 3 HOH 45 124 124 HOH HOH A . C 3 HOH 46 125 125 HOH HOH A . C 3 HOH 47 126 126 HOH HOH A . C 3 HOH 48 127 127 HOH HOH A . C 3 HOH 49 128 128 HOH HOH A . C 3 HOH 50 129 129 HOH HOH A . C 3 HOH 51 130 130 HOH HOH A . C 3 HOH 52 131 131 HOH HOH A . C 3 HOH 53 132 132 HOH HOH A . C 3 HOH 54 134 134 HOH HOH A . C 3 HOH 55 135 135 HOH HOH A . C 3 HOH 56 136 136 HOH HOH A . C 3 HOH 57 137 137 HOH HOH A . C 3 HOH 58 138 138 HOH HOH A . C 3 HOH 59 139 139 HOH HOH A . C 3 HOH 60 140 140 HOH HOH A . C 3 HOH 61 141 141 HOH HOH A . C 3 HOH 62 142 142 HOH HOH A . C 3 HOH 63 143 143 HOH HOH A . C 3 HOH 64 144 144 HOH HOH A . C 3 HOH 65 145 145 HOH HOH A . C 3 HOH 66 146 146 HOH HOH A . C 3 HOH 67 147 147 HOH HOH A . C 3 HOH 68 148 148 HOH HOH A . C 3 HOH 69 149 149 HOH HOH A . C 3 HOH 70 150 150 HOH HOH A . C 3 HOH 71 151 151 HOH HOH A . C 3 HOH 72 152 152 HOH HOH A . C 3 HOH 73 153 153 HOH HOH A . C 3 HOH 74 154 154 HOH HOH A . C 3 HOH 75 155 155 HOH HOH A . C 3 HOH 76 156 156 HOH HOH A . C 3 HOH 77 157 157 HOH HOH A . C 3 HOH 78 159 159 HOH HOH A . C 3 HOH 79 160 160 HOH HOH A . C 3 HOH 80 161 161 HOH HOH A . C 3 HOH 81 163 163 HOH HOH A . C 3 HOH 82 164 164 HOH HOH A . C 3 HOH 83 165 165 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SCALA 3.1.11 11/7/2002 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data processing' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 1 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 2 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 4 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 5 SCALA . ? ? ? ? 'data scaling' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? 7 # _cell.entry_id 3EMG _cell.length_a 39.870 _cell.length_b 84.450 _cell.length_c 41.440 _cell.angle_alpha 90.00 _cell.angle_beta 99.63 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EMG _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3EMG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 39.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '10 mg/mL Protein, 15-20% PEG 8000, 100 mM Sodium nitrate, 100 mM HEPES pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2003-12-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 # _reflns.entry_id 3EMG _reflns.d_resolution_high 2.600 _reflns.d_resolution_low 39.305 _reflns.number_obs 15406 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_netI_over_sigmaI 4.525 _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_redundancy 1.900 _reflns.percent_possible_obs 94.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 28644 _reflns.B_iso_Wilson_estimate 22.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.74 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all 4079 _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.135 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_Rsym_value 0.135 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 1.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2224 _reflns_shell.percent_possible_all 92.90 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3EMG _refine.ls_d_res_high 2.600 _refine.ls_d_res_low 39.305 _refine.pdbx_ls_sigma_F 0.0 _refine.ls_percent_reflns_obs 99.700 _refine.ls_number_reflns_obs 8365 _refine.ls_R_factor_R_work 0.1996 _refine.ls_R_factor_R_free 0.2217 _refine.ls_percent_reflns_R_free 12.300 _refine.ls_number_reflns_R_free 1034 _refine.B_iso_mean 24.373 _refine.aniso_B[1][1] -0.092 _refine.aniso_B[2][2] -0.182 _refine.aniso_B[3][3] 0.274 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.569 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.B_iso_max 68.40 _refine.B_iso_min 0.91 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 8365 _refine.ls_R_factor_all 0.1996 _refine.ls_R_factor_obs 0.1996 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'in-house apo structure of SYK' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol 29.8718 _refine.solvent_model_param_ksol 0.365859 _refine.pdbx_isotropic_thermal_model anisotropic _refine.details 'The Friedel pairs were used in phasing' _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3EMG _refine_analyze.Luzzati_coordinate_error_obs 0.33 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2081 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 2192 _refine_hist.d_res_high 2.600 _refine_hist.d_res_low 39.305 # _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.64 _refine_ls_shell.number_reflns_obs 411 _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 753685.par ? 'X-RAY DIFFRACTION' 3 water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 3EMG _struct.title 'Discovery and SAR of novel 4-thiazolyl-2-phenylaminopyrimidines as potent inhibitors of spleen tyrosine kinase (SYK)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EMG _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;kinase, syk, Alternative splicing, ATP-binding, Host-virus interaction, Nucleotide-binding, Phosphoprotein, Polymorphism, SH2 domain, Transferase, Tyrosine-protein kinase, Ubl conjugation ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KSYK_HUMAN _struct_ref.pdbx_db_accession P43405 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN ; _struct_ref.pdbx_align_begin 349 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3EMG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 291 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P43405 _struct_ref_seq.db_align_beg 349 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 635 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 349 _struct_ref_seq.pdbx_auth_seq_align_end 635 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3EMG GLY A 1 ? UNP P43405 ? ? 'expression tag' 345 1 1 3EMG SER A 2 ? UNP P43405 ? ? 'expression tag' 346 2 1 3EMG LEU A 3 ? UNP P43405 ? ? 'expression tag' 347 3 1 3EMG HIS A 4 ? UNP P43405 ? ? 'expression tag' 348 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 69 ? GLN A 82 ? LEU A 413 GLN A 426 1 ? 14 HELX_P HELX_P2 2 PRO A 111 ? GLN A 118 ? PRO A 455 GLN A 462 1 ? 8 HELX_P HELX_P3 3 LYS A 123 ? SER A 144 ? LYS A 467 SER A 488 1 ? 22 HELX_P HELX_P4 4 ALA A 152 ? ARG A 154 ? ALA A 496 ARG A 498 5 ? 3 HELX_P HELX_P5 5 ASP A 168 ? SER A 172 ? ASP A 512 SER A 516 5 ? 5 HELX_P HELX_P6 6 PRO A 191 ? TYR A 195 ? PRO A 535 TYR A 539 5 ? 5 HELX_P HELX_P7 7 ALA A 196 ? TYR A 202 ? ALA A 540 TYR A 546 1 ? 7 HELX_P HELX_P8 8 SER A 207 ? SER A 223 ? SER A 551 SER A 567 1 ? 17 HELX_P HELX_P9 9 LYS A 233 ? LYS A 243 ? LYS A 577 LYS A 587 1 ? 11 HELX_P HELX_P10 10 PRO A 254 ? TRP A 265 ? PRO A 598 TRP A 609 1 ? 12 HELX_P HELX_P11 11 GLY A 274 ? TYR A 287 ? GLY A 618 TYR A 631 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 189 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 533 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 TRP _struct_mon_prot_cis.pdbx_label_seq_id_2 190 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 TRP _struct_mon_prot_cis.pdbx_auth_seq_id_2 534 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.24 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? D ? 2 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 26 ? LEU A 28 ? LEU A 370 LEU A 372 A 2 GLY A 39 ? GLN A 47 ? GLY A 383 GLN A 391 A 3 GLY A 34 ? SER A 35 ? GLY A 378 SER A 379 B 1 LEU A 26 ? LEU A 28 ? LEU A 370 LEU A 372 B 2 GLY A 39 ? GLN A 47 ? GLY A 383 GLN A 391 B 3 VAL A 52 ? LEU A 60 ? VAL A 396 LEU A 404 B 4 TRP A 100 ? GLU A 105 ? TRP A 444 GLU A 449 B 5 MET A 91 ? GLU A 96 ? MET A 435 GLU A 440 C 1 PHE A 146 ? VAL A 147 ? PHE A 490 VAL A 491 C 2 LYS A 173 ? ALA A 174 ? LYS A 517 ALA A 518 D 1 VAL A 156 ? THR A 160 ? VAL A 500 THR A 504 D 2 TYR A 163 ? ILE A 166 ? TYR A 507 ILE A 510 E 1 TYR A 181 ? LYS A 183 ? TYR A 525 LYS A 527 E 2 LYS A 204 ? SER A 206 ? LYS A 548 SER A 550 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 27 ? N THR A 371 O TYR A 45 ? O TYR A 389 A 2 3 O VAL A 41 ? O VAL A 385 N GLY A 34 ? N GLY A 378 B 1 2 N THR A 27 ? N THR A 371 O TYR A 45 ? O TYR A 389 B 2 3 N TYR A 46 ? N TYR A 390 O LYS A 53 ? O LYS A 397 B 3 4 N LYS A 58 ? N LYS A 402 O LEU A 102 ? O LEU A 446 B 4 5 O MET A 101 ? O MET A 445 N CYS A 95 ? N CYS A 439 C 1 2 N VAL A 147 ? N VAL A 491 O LYS A 173 ? O LYS A 517 D 1 2 N VAL A 159 ? N VAL A 503 O TYR A 163 ? O TYR A 507 E 1 2 N TYR A 182 ? N TYR A 526 O PHE A 205 ? O PHE A 549 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 685 _struct_site.pdbx_auth_seq_id 685 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE 685 A 685' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 LEU A 33 ? LEU A 377 . ? 1_555 ? 2 AC1 13 SER A 35 ? SER A 379 . ? 1_555 ? 3 AC1 13 PHE A 38 ? PHE A 382 . ? 1_555 ? 4 AC1 13 VAL A 41 ? VAL A 385 . ? 1_555 ? 5 AC1 13 ALA A 56 ? ALA A 400 . ? 1_555 ? 6 AC1 13 LYS A 58 ? LYS A 402 . ? 1_555 ? 7 AC1 13 MET A 104 ? MET A 448 . ? 1_555 ? 8 AC1 13 GLU A 105 ? GLU A 449 . ? 1_555 ? 9 AC1 13 MET A 106 ? MET A 450 . ? 1_555 ? 10 AC1 13 ALA A 107 ? ALA A 451 . ? 1_555 ? 11 AC1 13 GLY A 110 ? GLY A 454 . ? 1_555 ? 12 AC1 13 LEU A 157 ? LEU A 501 . ? 1_555 ? 13 AC1 13 ASP A 168 ? ASP A 512 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LYS 368 ? ? O A HOH 129 ? ? 1.90 2 1 CG A MET 392 ? ? O A HOH 148 ? ? 2.11 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLN _pdbx_validate_symm_contact.auth_seq_id_1 391 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 127 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_656 _pdbx_validate_symm_contact.dist 1.86 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A LYS 548 ? ? CE A LYS 548 ? ? 1.664 1.508 0.156 0.025 N 2 1 CB A CYS 593 ? ? SG A CYS 593 ? ? 1.657 1.812 -0.155 0.016 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 366 ? ? CG A ASP 366 ? ? OD2 A ASP 366 ? ? 124.10 118.30 5.80 0.90 N 2 1 NE A ARG 434 ? ? CZ A ARG 434 ? ? NH1 A ARG 434 ? ? 116.64 120.30 -3.66 0.50 N 3 1 N A GLU 440 ? ? CA A GLU 440 ? ? C A GLU 440 ? ? 129.46 111.00 18.46 2.70 N 4 1 N A ALA 441 ? ? CA A ALA 441 ? ? CB A ALA 441 ? ? 95.60 110.10 -14.50 1.40 N 5 1 N A ALA 441 ? ? CA A ALA 441 ? ? C A ALA 441 ? ? 145.49 111.00 34.49 2.70 N 6 1 CG A MET 480 ? ? SD A MET 480 ? ? CE A MET 480 ? ? 110.70 100.20 10.50 1.60 N 7 1 CB A LEU 485 ? ? CG A LEU 485 ? ? CD1 A LEU 485 ? ? 100.72 111.00 -10.28 1.70 N 8 1 NE A ARG 498 ? ? CZ A ARG 498 ? ? NH1 A ARG 498 ? ? 116.43 120.30 -3.87 0.50 N 9 1 NE A ARG 498 ? ? CZ A ARG 498 ? ? NH2 A ARG 498 ? ? 124.32 120.30 4.02 0.50 N 10 1 NE A ARG 520 ? ? CZ A ARG 520 ? ? NH1 A ARG 520 ? ? 117.15 120.30 -3.15 0.50 N 11 1 CB A ASP 554 ? ? CG A ASP 554 ? ? OD2 A ASP 554 ? ? 112.84 118.30 -5.46 0.90 N 12 1 CB A LEU 585 ? ? CG A LEU 585 ? ? CD1 A LEU 585 ? ? 99.54 111.00 -11.46 1.70 N 13 1 NE A ARG 590 ? ? CZ A ARG 590 ? ? NH1 A ARG 590 ? ? 117.07 120.30 -3.23 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 369 ? ? -92.85 44.45 2 1 GLU A 440 ? ? -91.86 57.91 3 1 ALA A 441 ? ? -91.94 -72.74 4 1 ARG A 464 ? ? -62.73 0.95 5 1 ARG A 493 ? ? 83.15 -12.30 6 1 ASP A 494 ? ? -147.84 46.94 7 1 LYS A 587 ? ? -56.33 -8.14 8 1 TRP A 609 ? ? -92.41 36.05 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LYS _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 394 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 VAL _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 395 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 146.75 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 345 ? A GLY 1 2 1 Y 1 A SER 346 ? A SER 2 3 1 Y 1 A LEU 347 ? A LEU 3 4 1 Y 1 A HIS 348 ? A HIS 4 5 1 Y 1 A GLU 349 ? A GLU 5 6 1 Y 1 A SER 350 ? A SER 6 7 1 Y 1 A PRO 351 ? A PRO 7 8 1 Y 1 A TYR 352 ? A TYR 8 9 1 Y 1 A ALA 353 ? A ALA 9 10 1 Y 1 A ASP 354 ? A ASP 10 11 1 Y 1 A PRO 355 ? A PRO 11 12 1 Y 1 A GLU 356 ? A GLU 12 13 1 Y 1 A GLU 357 ? A GLU 13 14 1 Y 1 A ILE 358 ? A ILE 14 15 1 Y 1 A ARG 359 ? A ARG 15 16 1 Y 1 A PRO 360 ? A PRO 16 17 1 Y 1 A LYS 361 ? A LYS 17 18 1 Y 1 A GLU 362 ? A GLU 18 19 1 Y 1 A VAL 363 ? A VAL 19 20 1 Y 1 A TYR 364 ? A TYR 20 21 1 Y 1 A LYS 393 ? A LYS 49 22 1 Y 1 A ASN 406 ? A ASN 62 23 1 Y 1 A GLU 407 ? A GLU 63 24 1 Y 1 A ALA 408 ? A ALA 64 25 1 Y 1 A ASN 409 ? A ASN 65 26 1 Y 1 A ASP 410 ? A ASP 66 27 1 Y 1 A PRO 411 ? A PRO 67 28 1 Y 1 A ALA 412 ? A ALA 68 29 1 Y 1 A GLN 529 ? A GLN 185 30 1 Y 1 A THR 530 ? A THR 186 31 1 Y 1 A HIS 531 ? A HIS 187 32 1 Y 1 A GLY 532 ? A GLY 188 33 1 Y 1 A ASP 632 ? A ASP 288 34 1 Y 1 A VAL 633 ? A VAL 289 35 1 Y 1 A VAL 634 ? A VAL 290 36 1 Y 1 A ASN 635 ? A ASN 291 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 685 C1 C N N 1 685 C2 C N S 2 685 C4 C N N 3 685 O5 O N N 4 685 N6 N N N 5 685 C7 C N N 6 685 O8 O N N 7 685 C9 C Y N 8 685 S10 S Y N 9 685 C11 C Y N 10 685 N12 N Y N 11 685 C13 C Y N 12 685 C14 C N N 13 685 C15 C Y N 14 685 C16 C Y N 15 685 C17 C Y N 16 685 N18 N Y N 17 685 C19 C Y N 18 685 N20 N N N 19 685 C21 C Y N 20 685 C22 C Y N 21 685 C23 C Y N 22 685 C24 C N N 23 685 C25 C Y N 24 685 C26 C Y N 25 685 C27 C N N 26 685 C28 C Y N 27 685 N29 N Y N 28 685 H1 H N N 29 685 H1A H N N 30 685 H1B H N N 31 685 H2 H N N 32 685 H4 H N N 33 685 H4A H N N 34 685 HO5 H N N 35 685 HN6 H N N 36 685 H14 H N N 37 685 H14A H N N 38 685 H14B H N N 39 685 H16 H N N 40 685 H17 H N N 41 685 HN20 H N N 42 685 H22 H N N 43 685 H24 H N N 44 685 H24A H N N 45 685 H24B H N N 46 685 H25 H N N 47 685 H27 H N N 48 685 H27A H N N 49 685 H27B H N N 50 685 H28 H N N 51 ALA N N N N 52 ALA CA C N S 53 ALA C C N N 54 ALA O O N N 55 ALA CB C N N 56 ALA OXT O N N 57 ALA H H N N 58 ALA H2 H N N 59 ALA HA H N N 60 ALA HB1 H N N 61 ALA HB2 H N N 62 ALA HB3 H N N 63 ALA HXT H N N 64 ARG N N N N 65 ARG CA C N S 66 ARG C C N N 67 ARG O O N N 68 ARG CB C N N 69 ARG CG C N N 70 ARG CD C N N 71 ARG NE N N N 72 ARG CZ C N N 73 ARG NH1 N N N 74 ARG NH2 N N N 75 ARG OXT O N N 76 ARG H H N N 77 ARG H2 H N N 78 ARG HA H N N 79 ARG HB2 H N N 80 ARG HB3 H N N 81 ARG HG2 H N N 82 ARG HG3 H N N 83 ARG HD2 H N N 84 ARG HD3 H N N 85 ARG HE H N N 86 ARG HH11 H N N 87 ARG HH12 H N N 88 ARG HH21 H N N 89 ARG HH22 H N N 90 ARG HXT H N N 91 ASN N N N N 92 ASN CA C N S 93 ASN C C N N 94 ASN O O N N 95 ASN CB C N N 96 ASN CG C N N 97 ASN OD1 O N N 98 ASN ND2 N N N 99 ASN OXT O N N 100 ASN H H N N 101 ASN H2 H N N 102 ASN HA H N N 103 ASN HB2 H N N 104 ASN HB3 H N N 105 ASN HD21 H N N 106 ASN HD22 H N N 107 ASN HXT H N N 108 ASP N N N N 109 ASP CA C N S 110 ASP C C N N 111 ASP O O N N 112 ASP CB C N N 113 ASP CG C N N 114 ASP OD1 O N N 115 ASP OD2 O N N 116 ASP OXT O N N 117 ASP H H N N 118 ASP H2 H N N 119 ASP HA H N N 120 ASP HB2 H N N 121 ASP HB3 H N N 122 ASP HD2 H N N 123 ASP HXT H N N 124 CYS N N N N 125 CYS CA C N R 126 CYS C C N N 127 CYS O O N N 128 CYS CB C N N 129 CYS SG S N N 130 CYS OXT O N N 131 CYS H H N N 132 CYS H2 H N N 133 CYS HA H N N 134 CYS HB2 H N N 135 CYS HB3 H N N 136 CYS HG H N N 137 CYS HXT H N N 138 GLN N N N N 139 GLN CA C N S 140 GLN C C N N 141 GLN O O N N 142 GLN CB C N N 143 GLN CG C N N 144 GLN CD C N N 145 GLN OE1 O N N 146 GLN NE2 N N N 147 GLN OXT O N N 148 GLN H H N N 149 GLN H2 H N N 150 GLN HA H N N 151 GLN HB2 H N N 152 GLN HB3 H N N 153 GLN HG2 H N N 154 GLN HG3 H N N 155 GLN HE21 H N N 156 GLN HE22 H N N 157 GLN HXT H N N 158 GLU N N N N 159 GLU CA C N S 160 GLU C C N N 161 GLU O O N N 162 GLU CB C N N 163 GLU CG C N N 164 GLU CD C N N 165 GLU OE1 O N N 166 GLU OE2 O N N 167 GLU OXT O N N 168 GLU H H N N 169 GLU H2 H N N 170 GLU HA H N N 171 GLU HB2 H N N 172 GLU HB3 H N N 173 GLU HG2 H N N 174 GLU HG3 H N N 175 GLU HE2 H N N 176 GLU HXT H N N 177 GLY N N N N 178 GLY CA C N N 179 GLY C C N N 180 GLY O O N N 181 GLY OXT O N N 182 GLY H H N N 183 GLY H2 H N N 184 GLY HA2 H N N 185 GLY HA3 H N N 186 GLY HXT H N N 187 HIS N N N N 188 HIS CA C N S 189 HIS C C N N 190 HIS O O N N 191 HIS CB C N N 192 HIS CG C Y N 193 HIS ND1 N Y N 194 HIS CD2 C Y N 195 HIS CE1 C Y N 196 HIS NE2 N Y N 197 HIS OXT O N N 198 HIS H H N N 199 HIS H2 H N N 200 HIS HA H N N 201 HIS HB2 H N N 202 HIS HB3 H N N 203 HIS HD1 H N N 204 HIS HD2 H N N 205 HIS HE1 H N N 206 HIS HE2 H N N 207 HIS HXT H N N 208 HOH O O N N 209 HOH H1 H N N 210 HOH H2 H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 685 C1 C2 sing N N 1 685 C1 H1 sing N N 2 685 C1 H1A sing N N 3 685 C1 H1B sing N N 4 685 C2 C4 sing N N 5 685 C2 N6 sing N N 6 685 C2 H2 sing N N 7 685 O5 C4 sing N N 8 685 C4 H4 sing N N 9 685 C4 H4A sing N N 10 685 O5 HO5 sing N N 11 685 N6 C7 sing N N 12 685 N6 HN6 sing N N 13 685 O8 C7 doub N N 14 685 C7 C9 sing N N 15 685 C9 C13 doub Y N 16 685 C9 S10 sing Y N 17 685 S10 C11 sing Y N 18 685 N12 C11 doub Y N 19 685 C11 C15 sing Y N 20 685 C13 N12 sing Y N 21 685 C14 C13 sing N N 22 685 C14 H14 sing N N 23 685 C14 H14A sing N N 24 685 C14 H14B sing N N 25 685 C15 N29 doub Y N 26 685 C15 C16 sing Y N 27 685 C16 C17 doub Y N 28 685 C16 H16 sing N N 29 685 C17 N18 sing Y N 30 685 C17 H17 sing N N 31 685 C19 N18 doub Y N 32 685 N29 C19 sing Y N 33 685 C19 N20 sing N N 34 685 C21 N20 sing N N 35 685 N20 HN20 sing N N 36 685 C22 C21 doub Y N 37 685 C21 C28 sing Y N 38 685 C23 C22 sing Y N 39 685 C22 H22 sing N N 40 685 C24 C23 sing N N 41 685 C23 C25 doub Y N 42 685 C24 H24 sing N N 43 685 C24 H24A sing N N 44 685 C24 H24B sing N N 45 685 C25 C26 sing Y N 46 685 C25 H25 sing N N 47 685 C26 C27 sing N N 48 685 C26 C28 doub Y N 49 685 C27 H27 sing N N 50 685 C27 H27A sing N N 51 685 C27 H27B sing N N 52 685 C28 H28 sing N N 53 ALA N CA sing N N 54 ALA N H sing N N 55 ALA N H2 sing N N 56 ALA CA C sing N N 57 ALA CA CB sing N N 58 ALA CA HA sing N N 59 ALA C O doub N N 60 ALA C OXT sing N N 61 ALA CB HB1 sing N N 62 ALA CB HB2 sing N N 63 ALA CB HB3 sing N N 64 ALA OXT HXT sing N N 65 ARG N CA sing N N 66 ARG N H sing N N 67 ARG N H2 sing N N 68 ARG CA C sing N N 69 ARG CA CB sing N N 70 ARG CA HA sing N N 71 ARG C O doub N N 72 ARG C OXT sing N N 73 ARG CB CG sing N N 74 ARG CB HB2 sing N N 75 ARG CB HB3 sing N N 76 ARG CG CD sing N N 77 ARG CG HG2 sing N N 78 ARG CG HG3 sing N N 79 ARG CD NE sing N N 80 ARG CD HD2 sing N N 81 ARG CD HD3 sing N N 82 ARG NE CZ sing N N 83 ARG NE HE sing N N 84 ARG CZ NH1 sing N N 85 ARG CZ NH2 doub N N 86 ARG NH1 HH11 sing N N 87 ARG NH1 HH12 sing N N 88 ARG NH2 HH21 sing N N 89 ARG NH2 HH22 sing N N 90 ARG OXT HXT sing N N 91 ASN N CA sing N N 92 ASN N H sing N N 93 ASN N H2 sing N N 94 ASN CA C sing N N 95 ASN CA CB sing N N 96 ASN CA HA sing N N 97 ASN C O doub N N 98 ASN C OXT sing N N 99 ASN CB CG sing N N 100 ASN CB HB2 sing N N 101 ASN CB HB3 sing N N 102 ASN CG OD1 doub N N 103 ASN CG ND2 sing N N 104 ASN ND2 HD21 sing N N 105 ASN ND2 HD22 sing N N 106 ASN OXT HXT sing N N 107 ASP N CA sing N N 108 ASP N H sing N N 109 ASP N H2 sing N N 110 ASP CA C sing N N 111 ASP CA CB sing N N 112 ASP CA HA sing N N 113 ASP C O doub N N 114 ASP C OXT sing N N 115 ASP CB CG sing N N 116 ASP CB HB2 sing N N 117 ASP CB HB3 sing N N 118 ASP CG OD1 doub N N 119 ASP CG OD2 sing N N 120 ASP OD2 HD2 sing N N 121 ASP OXT HXT sing N N 122 CYS N CA sing N N 123 CYS N H sing N N 124 CYS N H2 sing N N 125 CYS CA C sing N N 126 CYS CA CB sing N N 127 CYS CA HA sing N N 128 CYS C O doub N N 129 CYS C OXT sing N N 130 CYS CB SG sing N N 131 CYS CB HB2 sing N N 132 CYS CB HB3 sing N N 133 CYS SG HG sing N N 134 CYS OXT HXT sing N N 135 GLN N CA sing N N 136 GLN N H sing N N 137 GLN N H2 sing N N 138 GLN CA C sing N N 139 GLN CA CB sing N N 140 GLN CA HA sing N N 141 GLN C O doub N N 142 GLN C OXT sing N N 143 GLN CB CG sing N N 144 GLN CB HB2 sing N N 145 GLN CB HB3 sing N N 146 GLN CG CD sing N N 147 GLN CG HG2 sing N N 148 GLN CG HG3 sing N N 149 GLN CD OE1 doub N N 150 GLN CD NE2 sing N N 151 GLN NE2 HE21 sing N N 152 GLN NE2 HE22 sing N N 153 GLN OXT HXT sing N N 154 GLU N CA sing N N 155 GLU N H sing N N 156 GLU N H2 sing N N 157 GLU CA C sing N N 158 GLU CA CB sing N N 159 GLU CA HA sing N N 160 GLU C O doub N N 161 GLU C OXT sing N N 162 GLU CB CG sing N N 163 GLU CB HB2 sing N N 164 GLU CB HB3 sing N N 165 GLU CG CD sing N N 166 GLU CG HG2 sing N N 167 GLU CG HG3 sing N N 168 GLU CD OE1 doub N N 169 GLU CD OE2 sing N N 170 GLU OE2 HE2 sing N N 171 GLU OXT HXT sing N N 172 GLY N CA sing N N 173 GLY N H sing N N 174 GLY N H2 sing N N 175 GLY CA C sing N N 176 GLY CA HA2 sing N N 177 GLY CA HA3 sing N N 178 GLY C O doub N N 179 GLY C OXT sing N N 180 GLY OXT HXT sing N N 181 HIS N CA sing N N 182 HIS N H sing N N 183 HIS N H2 sing N N 184 HIS CA C sing N N 185 HIS CA CB sing N N 186 HIS CA HA sing N N 187 HIS C O doub N N 188 HIS C OXT sing N N 189 HIS CB CG sing N N 190 HIS CB HB2 sing N N 191 HIS CB HB3 sing N N 192 HIS CG ND1 sing Y N 193 HIS CG CD2 doub Y N 194 HIS ND1 CE1 doub Y N 195 HIS ND1 HD1 sing N N 196 HIS CD2 NE2 sing Y N 197 HIS CD2 HD2 sing N N 198 HIS CE1 NE2 sing Y N 199 HIS CE1 HE1 sing N N 200 HIS NE2 HE2 sing N N 201 HIS OXT HXT sing N N 202 HOH O H1 sing N N 203 HOH O H2 sing N N 204 ILE N CA sing N N 205 ILE N H sing N N 206 ILE N H2 sing N N 207 ILE CA C sing N N 208 ILE CA CB sing N N 209 ILE CA HA sing N N 210 ILE C O doub N N 211 ILE C OXT sing N N 212 ILE CB CG1 sing N N 213 ILE CB CG2 sing N N 214 ILE CB HB sing N N 215 ILE CG1 CD1 sing N N 216 ILE CG1 HG12 sing N N 217 ILE CG1 HG13 sing N N 218 ILE CG2 HG21 sing N N 219 ILE CG2 HG22 sing N N 220 ILE CG2 HG23 sing N N 221 ILE CD1 HD11 sing N N 222 ILE CD1 HD12 sing N N 223 ILE CD1 HD13 sing N N 224 ILE OXT HXT sing N N 225 LEU N CA sing N N 226 LEU N H sing N N 227 LEU N H2 sing N N 228 LEU CA C sing N N 229 LEU CA CB sing N N 230 LEU CA HA sing N N 231 LEU C O doub N N 232 LEU C OXT sing N N 233 LEU CB CG sing N N 234 LEU CB HB2 sing N N 235 LEU CB HB3 sing N N 236 LEU CG CD1 sing N N 237 LEU CG CD2 sing N N 238 LEU CG HG sing N N 239 LEU CD1 HD11 sing N N 240 LEU CD1 HD12 sing N N 241 LEU CD1 HD13 sing N N 242 LEU CD2 HD21 sing N N 243 LEU CD2 HD22 sing N N 244 LEU CD2 HD23 sing N N 245 LEU OXT HXT sing N N 246 LYS N CA sing N N 247 LYS N H sing N N 248 LYS N H2 sing N N 249 LYS CA C sing N N 250 LYS CA CB sing N N 251 LYS CA HA sing N N 252 LYS C O doub N N 253 LYS C OXT sing N N 254 LYS CB CG sing N N 255 LYS CB HB2 sing N N 256 LYS CB HB3 sing N N 257 LYS CG CD sing N N 258 LYS CG HG2 sing N N 259 LYS CG HG3 sing N N 260 LYS CD CE sing N N 261 LYS CD HD2 sing N N 262 LYS CD HD3 sing N N 263 LYS CE NZ sing N N 264 LYS CE HE2 sing N N 265 LYS CE HE3 sing N N 266 LYS NZ HZ1 sing N N 267 LYS NZ HZ2 sing N N 268 LYS NZ HZ3 sing N N 269 LYS OXT HXT sing N N 270 MET N CA sing N N 271 MET N H sing N N 272 MET N H2 sing N N 273 MET CA C sing N N 274 MET CA CB sing N N 275 MET CA HA sing N N 276 MET C O doub N N 277 MET C OXT sing N N 278 MET CB CG sing N N 279 MET CB HB2 sing N N 280 MET CB HB3 sing N N 281 MET CG SD sing N N 282 MET CG HG2 sing N N 283 MET CG HG3 sing N N 284 MET SD CE sing N N 285 MET CE HE1 sing N N 286 MET CE HE2 sing N N 287 MET CE HE3 sing N N 288 MET OXT HXT sing N N 289 PHE N CA sing N N 290 PHE N H sing N N 291 PHE N H2 sing N N 292 PHE CA C sing N N 293 PHE CA CB sing N N 294 PHE CA HA sing N N 295 PHE C O doub N N 296 PHE C OXT sing N N 297 PHE CB CG sing N N 298 PHE CB HB2 sing N N 299 PHE CB HB3 sing N N 300 PHE CG CD1 doub Y N 301 PHE CG CD2 sing Y N 302 PHE CD1 CE1 sing Y N 303 PHE CD1 HD1 sing N N 304 PHE CD2 CE2 doub Y N 305 PHE CD2 HD2 sing N N 306 PHE CE1 CZ doub Y N 307 PHE CE1 HE1 sing N N 308 PHE CE2 CZ sing Y N 309 PHE CE2 HE2 sing N N 310 PHE CZ HZ sing N N 311 PHE OXT HXT sing N N 312 PRO N CA sing N N 313 PRO N CD sing N N 314 PRO N H sing N N 315 PRO CA C sing N N 316 PRO CA CB sing N N 317 PRO CA HA sing N N 318 PRO C O doub N N 319 PRO C OXT sing N N 320 PRO CB CG sing N N 321 PRO CB HB2 sing N N 322 PRO CB HB3 sing N N 323 PRO CG CD sing N N 324 PRO CG HG2 sing N N 325 PRO CG HG3 sing N N 326 PRO CD HD2 sing N N 327 PRO CD HD3 sing N N 328 PRO OXT HXT sing N N 329 SER N CA sing N N 330 SER N H sing N N 331 SER N H2 sing N N 332 SER CA C sing N N 333 SER CA CB sing N N 334 SER CA HA sing N N 335 SER C O doub N N 336 SER C OXT sing N N 337 SER CB OG sing N N 338 SER CB HB2 sing N N 339 SER CB HB3 sing N N 340 SER OG HG sing N N 341 SER OXT HXT sing N N 342 THR N CA sing N N 343 THR N H sing N N 344 THR N H2 sing N N 345 THR CA C sing N N 346 THR CA CB sing N N 347 THR CA HA sing N N 348 THR C O doub N N 349 THR C OXT sing N N 350 THR CB OG1 sing N N 351 THR CB CG2 sing N N 352 THR CB HB sing N N 353 THR OG1 HG1 sing N N 354 THR CG2 HG21 sing N N 355 THR CG2 HG22 sing N N 356 THR CG2 HG23 sing N N 357 THR OXT HXT sing N N 358 TRP N CA sing N N 359 TRP N H sing N N 360 TRP N H2 sing N N 361 TRP CA C sing N N 362 TRP CA CB sing N N 363 TRP CA HA sing N N 364 TRP C O doub N N 365 TRP C OXT sing N N 366 TRP CB CG sing N N 367 TRP CB HB2 sing N N 368 TRP CB HB3 sing N N 369 TRP CG CD1 doub Y N 370 TRP CG CD2 sing Y N 371 TRP CD1 NE1 sing Y N 372 TRP CD1 HD1 sing N N 373 TRP CD2 CE2 doub Y N 374 TRP CD2 CE3 sing Y N 375 TRP NE1 CE2 sing Y N 376 TRP NE1 HE1 sing N N 377 TRP CE2 CZ2 sing Y N 378 TRP CE3 CZ3 doub Y N 379 TRP CE3 HE3 sing N N 380 TRP CZ2 CH2 doub Y N 381 TRP CZ2 HZ2 sing N N 382 TRP CZ3 CH2 sing Y N 383 TRP CZ3 HZ3 sing N N 384 TRP CH2 HH2 sing N N 385 TRP OXT HXT sing N N 386 TYR N CA sing N N 387 TYR N H sing N N 388 TYR N H2 sing N N 389 TYR CA C sing N N 390 TYR CA CB sing N N 391 TYR CA HA sing N N 392 TYR C O doub N N 393 TYR C OXT sing N N 394 TYR CB CG sing N N 395 TYR CB HB2 sing N N 396 TYR CB HB3 sing N N 397 TYR CG CD1 doub Y N 398 TYR CG CD2 sing Y N 399 TYR CD1 CE1 sing Y N 400 TYR CD1 HD1 sing N N 401 TYR CD2 CE2 doub Y N 402 TYR CD2 HD2 sing N N 403 TYR CE1 CZ doub Y N 404 TYR CE1 HE1 sing N N 405 TYR CE2 CZ sing Y N 406 TYR CE2 HE2 sing N N 407 TYR CZ OH sing N N 408 TYR OH HH sing N N 409 TYR OXT HXT sing N N 410 VAL N CA sing N N 411 VAL N H sing N N 412 VAL N H2 sing N N 413 VAL CA C sing N N 414 VAL CA CB sing N N 415 VAL CA HA sing N N 416 VAL C O doub N N 417 VAL C OXT sing N N 418 VAL CB CG1 sing N N 419 VAL CB CG2 sing N N 420 VAL CB HB sing N N 421 VAL CG1 HG11 sing N N 422 VAL CG1 HG12 sing N N 423 VAL CG1 HG13 sing N N 424 VAL CG2 HG21 sing N N 425 VAL CG2 HG22 sing N N 426 VAL CG2 HG23 sing N N 427 VAL OXT HXT sing N N 428 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'in-house apo structure of SYK' # _atom_sites.entry_id 3EMG _atom_sites.fract_transf_matrix[1][1] 0.025082 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004256 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011841 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024476 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_