HEADER HYDROLASE 25-SEP-08 3EN9 TITLE STRUCTURE OF THE METHANOCOCCUS JANNASCHII KAE1-BUD32 FUSION PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: O-SIALOGLYCOPROTEIN ENDOPEPTIDASE/PROTEIN KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GLYCOPROTEASE; COMPND 5 EC: 3.4.24.57; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_COMMON: METHANOCOCCUS JANNASCHII; SOURCE 4 ORGANISM_TAXID: 2190; SOURCE 5 STRAIN: DSM 2661; SOURCE 6 GENE: GCP, MJ1130; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS ENDOPEPTIDASE ACTIVITY, PROTEIN KINASE ACTIVITY, PROTEIN KEYWDS 2 SERINE/THREONINE KINASE ACTIVITY, ATP BINDING, METALLOPEPTIDASE KEYWDS 3 ACTIVITY, HYDROLASE ACTIVITY, METAL ION BINDING, HYDROLASE, METAL- KEYWDS 4 BINDING, METALLOPROTEASE, PROTEASE, ZINC EXPDTA X-RAY DIFFRACTION AUTHOR D.NECULAI REVDAT 4 21-FEB-24 3EN9 1 REMARK SEQADV REVDAT 3 12-JAN-10 3EN9 1 JRNL REVDAT 2 24-FEB-09 3EN9 1 VERSN REVDAT 1 04-NOV-08 3EN9 0 JRNL AUTH D.Y.MAO,D.NECULAI,M.DOWNEY,S.ORLICKY,Y.Z.HAFFANI, JRNL AUTH 2 D.F.CECCARELLI,J.S.HO,R.K.SZILARD,W.ZHANG,C.S.HO,L.WAN, JRNL AUTH 3 C.FARES,S.RUMPEL,I.KURINOV,C.H.ARROWSMITH,D.DUROCHER, JRNL AUTH 4 F.SICHERI JRNL TITL ATOMIC STRUCTURE OF THE KEOPS COMPLEX: AN ANCIENT PROTEIN JRNL TITL 2 KINASE-CONTAINING MOLECULAR MACHINE. JRNL REF MOL.CELL V. 32 259 2008 JRNL REFN ISSN 1097-2765 JRNL PMID 18951093 JRNL DOI 10.1016/J.MOLCEL.2008.10.002 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 18.800 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 43966 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.3134 - 6.7258 0.98 2776 155 0.1893 0.2296 REMARK 3 2 6.7258 - 5.3392 1.00 2708 120 0.2041 0.2510 REMARK 3 3 5.3392 - 4.6645 1.00 2619 162 0.1707 0.2195 REMARK 3 4 4.6645 - 4.2381 1.00 2645 136 0.1678 0.2530 REMARK 3 5 4.2381 - 3.9344 1.00 2599 158 0.1791 0.2917 REMARK 3 6 3.9344 - 3.7025 1.00 2598 139 0.1809 0.2403 REMARK 3 7 3.7025 - 3.5170 1.00 2612 121 0.1908 0.2766 REMARK 3 8 3.5170 - 3.3640 1.00 2597 143 0.2021 0.2449 REMARK 3 9 3.3640 - 3.2345 1.00 2568 142 0.2098 0.2771 REMARK 3 10 3.2345 - 3.1229 1.00 2601 132 0.2022 0.3079 REMARK 3 11 3.1229 - 3.0252 1.00 2563 129 0.2153 0.2735 REMARK 3 12 3.0252 - 2.9387 1.00 2599 140 0.2232 0.2800 REMARK 3 13 2.9387 - 2.8614 1.00 2581 126 0.2369 0.3154 REMARK 3 14 2.8614 - 2.7916 1.00 2559 135 0.2439 0.3152 REMARK 3 15 2.7916 - 2.7281 1.00 2552 133 0.2629 0.3676 REMARK 3 16 2.7281 - 2.6700 1.00 2576 142 0.2881 0.3468 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 61.23 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.45400 REMARK 3 B22 (A**2) : -1.45400 REMARK 3 B33 (A**2) : 2.90800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.027 8432 REMARK 3 ANGLE : 1.257 11492 REMARK 3 CHIRALITY : 0.087 1260 REMARK 3 PLANARITY : 0.005 1442 REMARK 3 DIHEDRAL : 19.203 3093 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 29.1941 86.8079 65.9467 REMARK 3 T TENSOR REMARK 3 T11: 0.2908 T22: 0.3765 REMARK 3 T33: 0.3412 T12: -0.0433 REMARK 3 T13: -0.0054 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 0.4538 L22: 0.3850 REMARK 3 L33: 1.9808 L12: -0.0211 REMARK 3 L13: 0.0985 L23: -0.1826 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: -0.0536 S13: -0.0014 REMARK 3 S21: 0.0411 S22: -0.0901 S23: -0.1276 REMARK 3 S31: 0.2549 S32: 0.2557 S33: 0.0563 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 39.1400 142.6562 59.3846 REMARK 3 T TENSOR REMARK 3 T11: 0.4795 T22: 0.3857 REMARK 3 T33: 0.3919 T12: 0.0020 REMARK 3 T13: -0.0176 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.4316 L22: 1.9949 REMARK 3 L33: 0.0942 L12: 0.8469 REMARK 3 L13: -0.0344 L23: 0.2128 REMARK 3 S TENSOR REMARK 3 S11: -0.0655 S12: 0.0682 S13: 0.0610 REMARK 3 S21: -0.2899 S22: -0.0319 S23: 0.1258 REMARK 3 S31: 0.0299 S32: 0.0267 S33: 0.0784 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EN9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049535. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43971 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 148.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.230 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 1.880 REMARK 200 R MERGE (I) : 0.05780 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.92 REMARK 200 R MERGE FOR SHELL (I) : 0.22860 REMARK 200 R SYM FOR SHELL (I) : 0.22860 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM HEPES 10% PEG3000, 11% SPERMINE REMARK 280 TETRAHYDROCHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.21000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.10500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 102.31500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.21000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 102.31500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 34.10500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 BR1 TBR A 601 LIES ON A SPECIAL POSITION. REMARK 375 BR8 TBR A 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 LYS A 325 REMARK 465 GLU A 326 REMARK 465 ILE A 327 REMARK 465 LYS A 328 REMARK 465 GLY A 329 REMARK 465 LYS A 330 REMARK 465 LYS A 331 REMARK 465 ARG A 332 REMARK 465 LYS A 333 REMARK 465 ILE A 334 REMARK 465 PRO A 335 REMARK 465 GLU A 336 REMARK 465 HIS A 337 REMARK 465 LEU A 338 REMARK 465 ILE A 339 REMARK 465 GLY A 340 REMARK 465 LYS A 341 REMARK 465 GLY A 342 REMARK 465 GLU A 535 REMARK 465 GLY B -4 REMARK 465 ALA B -3 REMARK 465 MET B -2 REMARK 465 PRO B 35 REMARK 465 LYS B 36 REMARK 465 GLN B 37 REMARK 465 LYS B 325 REMARK 465 GLU B 326 REMARK 465 ILE B 327 REMARK 465 LYS B 328 REMARK 465 GLY B 329 REMARK 465 LYS B 330 REMARK 465 LYS B 331 REMARK 465 ARG B 332 REMARK 465 LYS B 333 REMARK 465 ILE B 334 REMARK 465 PRO B 335 REMARK 465 GLU B 336 REMARK 465 HIS B 337 REMARK 465 LEU B 338 REMARK 465 ILE B 339 REMARK 465 GLY B 340 REMARK 465 LYS B 341 REMARK 465 ARG B 530 REMARK 465 ALA B 531 REMARK 465 ARG B 532 REMARK 465 TYR B 533 REMARK 465 VAL B 534 REMARK 465 GLU B 535 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 -116.10 -135.07 REMARK 500 ASN A 27 96.35 -168.77 REMARK 500 ASN A 40 61.67 66.10 REMARK 500 ASP A 122 61.69 -153.53 REMARK 500 SER A 129 -167.26 -165.44 REMARK 500 ASP A 151 -100.43 -143.71 REMARK 500 LYS A 183 -31.35 -150.71 REMARK 500 THR A 308 33.10 -94.44 REMARK 500 ASN A 322 11.75 -140.40 REMARK 500 ASP A 354 -21.19 -162.56 REMARK 500 ASN A 428 75.50 -159.55 REMARK 500 ASP A 451 45.28 -149.60 REMARK 500 ASP A 460 -95.69 -123.57 REMARK 500 PHE A 468 21.38 -154.72 REMARK 500 ARG A 529 34.28 -74.86 REMARK 500 ARG A 530 51.28 -96.72 REMARK 500 ALA A 531 -163.49 -112.41 REMARK 500 ALA B 10 -109.03 -123.92 REMARK 500 GLU B 121 -42.42 -136.25 REMARK 500 ASP B 122 65.09 -152.68 REMARK 500 ASP B 151 -93.89 -129.37 REMARK 500 HIS B 241 31.62 -99.19 REMARK 500 ARG B 301 115.97 -165.67 REMARK 500 TYR B 314 118.63 -35.46 REMARK 500 ALA B 343 -98.77 -75.46 REMARK 500 ASP B 354 -5.85 77.09 REMARK 500 LYS B 392 1.70 -67.03 REMARK 500 LYS B 422 15.83 -66.72 REMARK 500 ASP B 423 47.33 -170.86 REMARK 500 VAL B 424 -30.26 -141.27 REMARK 500 ASN B 428 87.05 -152.55 REMARK 500 ASP B 451 45.31 -162.45 REMARK 500 LYS B 461 -23.52 -145.89 REMARK 500 PHE B 468 29.40 -157.51 REMARK 500 THR B 494 14.19 -149.40 REMARK 500 HIS B 495 32.76 -140.45 REMARK 500 GLU B 497 -77.23 -50.18 REMARK 500 LYS B 498 3.19 -67.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 TBR 601 A IS LOCATED ON A CRYSTALLOGRAPHIC 2-FOLD AXIS, THEREFORE REMARK 600 ONLY HALF OF IT WAS MODELED IN THE ASYMMETRIC UNIT. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 TBR A 601 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 600 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 106 NE2 REMARK 620 2 HIS A 110 NE2 102.8 REMARK 620 3 TYR A 127 OH 81.0 99.7 REMARK 620 4 ASP A 284 OD1 128.6 96.8 141.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 600 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 106 NE2 REMARK 620 2 HIS B 110 NE2 97.8 REMARK 620 3 TYR B 127 OH 79.7 101.1 REMARK 620 4 ASP B 284 OD1 110.7 104.4 150.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TBR B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TBR A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ENP RELATED DB: PDB DBREF 3EN9 A 1 535 UNP Q58530 GCP_METJA 1 535 DBREF 3EN9 B 1 535 UNP Q58530 GCP_METJA 1 535 SEQADV 3EN9 GLY A -4 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 ALA A -3 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 MET A -2 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 ASP A -1 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 PRO A 0 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 GLY B -4 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 ALA B -3 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 MET B -2 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 ASP B -1 UNP Q58530 EXPRESSION TAG SEQADV 3EN9 PRO B 0 UNP Q58530 EXPRESSION TAG SEQRES 1 A 540 GLY ALA MET ASP PRO MET ILE CYS LEU GLY LEU GLU GLY SEQRES 2 A 540 THR ALA GLU LYS THR GLY VAL GLY ILE VAL THR SER ASP SEQRES 3 A 540 GLY GLU VAL LEU PHE ASN LYS THR ILE MET TYR LYS PRO SEQRES 4 A 540 PRO LYS GLN GLY ILE ASN PRO ARG GLU ALA ALA ASP HIS SEQRES 5 A 540 HIS ALA GLU THR PHE PRO LYS LEU ILE LYS GLU ALA PHE SEQRES 6 A 540 GLU VAL VAL ASP LYS ASN GLU ILE ASP LEU ILE ALA PHE SEQRES 7 A 540 SER GLN GLY PRO GLY LEU GLY PRO SER LEU ARG VAL THR SEQRES 8 A 540 ALA THR VAL ALA ARG THR LEU SER LEU THR LEU LYS LYS SEQRES 9 A 540 PRO ILE ILE GLY VAL ASN HIS CYS ILE ALA HIS ILE GLU SEQRES 10 A 540 ILE GLY LYS LEU THR THR GLU ALA GLU ASP PRO LEU THR SEQRES 11 A 540 LEU TYR VAL SER GLY GLY ASN THR GLN VAL ILE ALA TYR SEQRES 12 A 540 VAL SER LYS LYS TYR ARG VAL PHE GLY GLU THR LEU ASP SEQRES 13 A 540 ILE ALA VAL GLY ASN CYS LEU ASP GLN PHE ALA ARG TYR SEQRES 14 A 540 VAL ASN LEU PRO HIS PRO GLY GLY PRO TYR ILE GLU GLU SEQRES 15 A 540 LEU ALA ARG LYS GLY LYS LYS LEU VAL ASP LEU PRO TYR SEQRES 16 A 540 THR VAL LYS GLY MET ASP ILE ALA PHE SER GLY LEU LEU SEQRES 17 A 540 THR ALA ALA MET ARG ALA TYR ASP ALA GLY GLU ARG LEU SEQRES 18 A 540 GLU ASP ILE CYS TYR SER LEU GLN GLU TYR ALA PHE SER SEQRES 19 A 540 MET LEU THR GLU ILE THR GLU ARG ALA LEU ALA HIS THR SEQRES 20 A 540 ASN LYS GLY GLU VAL MET LEU VAL GLY GLY VAL ALA ALA SEQRES 21 A 540 ASN ASN ARG LEU ARG GLU MET LEU LYS ALA MET CYS GLU SEQRES 22 A 540 GLY GLN ASN VAL ASP PHE TYR VAL PRO PRO LYS GLU PHE SEQRES 23 A 540 CYS GLY ASP ASN GLY ALA MET ILE ALA TRP LEU GLY LEU SEQRES 24 A 540 LEU MET HIS LYS ASN GLY ARG TRP MET SER LEU ASP GLU SEQRES 25 A 540 THR LYS ILE ILE PRO ASN TYR ARG THR ASP MET VAL GLU SEQRES 26 A 540 VAL ASN TRP ILE LYS GLU ILE LYS GLY LYS LYS ARG LYS SEQRES 27 A 540 ILE PRO GLU HIS LEU ILE GLY LYS GLY ALA GLU ALA ASP SEQRES 28 A 540 ILE LYS ARG ASP SER TYR LEU ASP PHE ASP VAL ILE ILE SEQRES 29 A 540 LYS GLU ARG VAL LYS LYS GLY TYR ARG ASP GLU ARG LEU SEQRES 30 A 540 ASP GLU ASN ILE ARG LYS SER ARG THR ALA ARG GLU ALA SEQRES 31 A 540 ARG TYR LEU ALA LEU VAL LYS ASP PHE GLY ILE PRO ALA SEQRES 32 A 540 PRO TYR ILE PHE ASP VAL ASP LEU ASP ASN LYS ARG ILE SEQRES 33 A 540 MET MET SER TYR ILE ASN GLY LYS LEU ALA LYS ASP VAL SEQRES 34 A 540 ILE GLU ASP ASN LEU ASP ILE ALA TYR LYS ILE GLY GLU SEQRES 35 A 540 ILE VAL GLY LYS LEU HIS LYS ASN ASP VAL ILE HIS ASN SEQRES 36 A 540 ASP LEU THR THR SER ASN PHE ILE PHE ASP LYS ASP LEU SEQRES 37 A 540 TYR ILE ILE ASP PHE GLY LEU GLY LYS ILE SER ASN LEU SEQRES 38 A 540 ASP GLU ASP LYS ALA VAL ASP LEU ILE VAL PHE LYS LYS SEQRES 39 A 540 ALA VAL LEU SER THR HIS HIS GLU LYS PHE ASP GLU ILE SEQRES 40 A 540 TRP GLU ARG PHE LEU GLU GLY TYR LYS SER VAL TYR ASP SEQRES 41 A 540 ARG TRP GLU ILE ILE LEU GLU LEU MET LYS ASP VAL GLU SEQRES 42 A 540 ARG ARG ALA ARG TYR VAL GLU SEQRES 1 B 540 GLY ALA MET ASP PRO MET ILE CYS LEU GLY LEU GLU GLY SEQRES 2 B 540 THR ALA GLU LYS THR GLY VAL GLY ILE VAL THR SER ASP SEQRES 3 B 540 GLY GLU VAL LEU PHE ASN LYS THR ILE MET TYR LYS PRO SEQRES 4 B 540 PRO LYS GLN GLY ILE ASN PRO ARG GLU ALA ALA ASP HIS SEQRES 5 B 540 HIS ALA GLU THR PHE PRO LYS LEU ILE LYS GLU ALA PHE SEQRES 6 B 540 GLU VAL VAL ASP LYS ASN GLU ILE ASP LEU ILE ALA PHE SEQRES 7 B 540 SER GLN GLY PRO GLY LEU GLY PRO SER LEU ARG VAL THR SEQRES 8 B 540 ALA THR VAL ALA ARG THR LEU SER LEU THR LEU LYS LYS SEQRES 9 B 540 PRO ILE ILE GLY VAL ASN HIS CYS ILE ALA HIS ILE GLU SEQRES 10 B 540 ILE GLY LYS LEU THR THR GLU ALA GLU ASP PRO LEU THR SEQRES 11 B 540 LEU TYR VAL SER GLY GLY ASN THR GLN VAL ILE ALA TYR SEQRES 12 B 540 VAL SER LYS LYS TYR ARG VAL PHE GLY GLU THR LEU ASP SEQRES 13 B 540 ILE ALA VAL GLY ASN CYS LEU ASP GLN PHE ALA ARG TYR SEQRES 14 B 540 VAL ASN LEU PRO HIS PRO GLY GLY PRO TYR ILE GLU GLU SEQRES 15 B 540 LEU ALA ARG LYS GLY LYS LYS LEU VAL ASP LEU PRO TYR SEQRES 16 B 540 THR VAL LYS GLY MET ASP ILE ALA PHE SER GLY LEU LEU SEQRES 17 B 540 THR ALA ALA MET ARG ALA TYR ASP ALA GLY GLU ARG LEU SEQRES 18 B 540 GLU ASP ILE CYS TYR SER LEU GLN GLU TYR ALA PHE SER SEQRES 19 B 540 MET LEU THR GLU ILE THR GLU ARG ALA LEU ALA HIS THR SEQRES 20 B 540 ASN LYS GLY GLU VAL MET LEU VAL GLY GLY VAL ALA ALA SEQRES 21 B 540 ASN ASN ARG LEU ARG GLU MET LEU LYS ALA MET CYS GLU SEQRES 22 B 540 GLY GLN ASN VAL ASP PHE TYR VAL PRO PRO LYS GLU PHE SEQRES 23 B 540 CYS GLY ASP ASN GLY ALA MET ILE ALA TRP LEU GLY LEU SEQRES 24 B 540 LEU MET HIS LYS ASN GLY ARG TRP MET SER LEU ASP GLU SEQRES 25 B 540 THR LYS ILE ILE PRO ASN TYR ARG THR ASP MET VAL GLU SEQRES 26 B 540 VAL ASN TRP ILE LYS GLU ILE LYS GLY LYS LYS ARG LYS SEQRES 27 B 540 ILE PRO GLU HIS LEU ILE GLY LYS GLY ALA GLU ALA ASP SEQRES 28 B 540 ILE LYS ARG ASP SER TYR LEU ASP PHE ASP VAL ILE ILE SEQRES 29 B 540 LYS GLU ARG VAL LYS LYS GLY TYR ARG ASP GLU ARG LEU SEQRES 30 B 540 ASP GLU ASN ILE ARG LYS SER ARG THR ALA ARG GLU ALA SEQRES 31 B 540 ARG TYR LEU ALA LEU VAL LYS ASP PHE GLY ILE PRO ALA SEQRES 32 B 540 PRO TYR ILE PHE ASP VAL ASP LEU ASP ASN LYS ARG ILE SEQRES 33 B 540 MET MET SER TYR ILE ASN GLY LYS LEU ALA LYS ASP VAL SEQRES 34 B 540 ILE GLU ASP ASN LEU ASP ILE ALA TYR LYS ILE GLY GLU SEQRES 35 B 540 ILE VAL GLY LYS LEU HIS LYS ASN ASP VAL ILE HIS ASN SEQRES 36 B 540 ASP LEU THR THR SER ASN PHE ILE PHE ASP LYS ASP LEU SEQRES 37 B 540 TYR ILE ILE ASP PHE GLY LEU GLY LYS ILE SER ASN LEU SEQRES 38 B 540 ASP GLU ASP LYS ALA VAL ASP LEU ILE VAL PHE LYS LYS SEQRES 39 B 540 ALA VAL LEU SER THR HIS HIS GLU LYS PHE ASP GLU ILE SEQRES 40 B 540 TRP GLU ARG PHE LEU GLU GLY TYR LYS SER VAL TYR ASP SEQRES 41 B 540 ARG TRP GLU ILE ILE LEU GLU LEU MET LYS ASP VAL GLU SEQRES 42 B 540 ARG ARG ALA ARG TYR VAL GLU HET MG A 600 1 HET TBR A 601 10 HET MG B 600 1 HET TBR B 601 18 HETNAM MG MAGNESIUM ION HETNAM TBR HEXATANTALUM DODECABROMIDE HETSYN TBR DODECABROMOHEXATANTALUM FORMUL 3 MG 2(MG 2+) FORMUL 4 TBR 2(BR12 TA6) FORMUL 7 HOH *91(H2 O) HELIX 1 1 GLU A 43 VAL A 63 1 21 HELIX 2 2 ASP A 64 ASN A 66 5 3 HELIX 3 3 LEU A 79 LYS A 98 1 20 HELIX 4 4 HIS A 106 THR A 118 1 13 HELIX 5 5 ALA A 153 VAL A 165 1 13 HELIX 6 6 GLY A 171 LYS A 181 1 11 HELIX 7 7 PHE A 199 ALA A 212 1 14 HELIX 8 8 ARG A 215 ASN A 243 1 29 HELIX 9 9 GLY A 251 ALA A 255 5 5 HELIX 10 10 ASN A 256 GLN A 270 1 15 HELIX 11 11 PRO A 278 GLY A 283 1 6 HELIX 12 12 ASN A 285 LYS A 298 1 14 HELIX 13 13 ASP A 369 VAL A 391 1 23 HELIX 14 14 LYS A 392 GLY A 395 5 4 HELIX 15 15 ALA A 421 ILE A 425 1 5 HELIX 16 16 ASP A 430 ASN A 445 1 16 HELIX 17 17 LEU A 476 HIS A 495 1 20 HELIX 18 18 LYS A 498 TYR A 514 1 17 HELIX 19 19 ARG A 516 ARG A 529 1 14 HELIX 20 20 ASN B 40 GLU B 61 1 22 HELIX 21 21 ASP B 64 ASN B 66 5 3 HELIX 22 22 LEU B 79 LYS B 98 1 20 HELIX 23 23 HIS B 106 THR B 117 1 12 HELIX 24 24 ALA B 153 VAL B 165 1 13 HELIX 25 25 GLY B 171 ARG B 180 1 10 HELIX 26 26 PHE B 199 GLY B 213 1 15 HELIX 27 27 ARG B 215 LEU B 239 1 25 HELIX 28 28 GLY B 251 ALA B 255 5 5 HELIX 29 29 ASN B 256 GLY B 269 1 14 HELIX 30 30 PRO B 278 GLY B 283 1 6 HELIX 31 31 ASN B 285 ASN B 299 1 15 HELIX 32 32 LEU B 305 LYS B 309 5 5 HELIX 33 33 ARG B 315 VAL B 319 5 5 HELIX 34 34 ASP B 369 LYS B 392 1 24 HELIX 35 35 LYS B 422 VAL B 424 5 3 HELIX 36 36 ASN B 428 ASN B 445 1 18 HELIX 37 37 THR B 453 SER B 455 5 3 HELIX 38 38 LEU B 476 HIS B 495 1 20 HELIX 39 39 LYS B 498 TYR B 514 1 17 HELIX 40 40 ARG B 516 GLU B 528 1 13 SHEET 1 A 5 VAL A 24 MET A 31 0 SHEET 2 A 5 LYS A 12 THR A 19 -1 N THR A 13 O ILE A 30 SHEET 3 A 5 ILE A 2 GLU A 7 -1 N CYS A 3 O VAL A 18 SHEET 4 A 5 ILE A 68 GLY A 76 1 O ASP A 69 N ILE A 2 SHEET 5 A 5 ILE A 101 ASN A 105 1 O VAL A 104 N PHE A 73 SHEET 1 B 5 LYS A 142 GLU A 148 0 SHEET 2 B 5 THR A 133 VAL A 139 -1 N VAL A 135 O GLY A 147 SHEET 3 B 5 LEU A 124 VAL A 128 -1 N THR A 125 O ILE A 136 SHEET 4 B 5 GLU A 246 VAL A 250 1 O GLU A 246 N LEU A 124 SHEET 5 B 5 ASP A 273 TYR A 275 1 O ASP A 273 N VAL A 247 SHEET 1 C 2 VAL A 192 LYS A 193 0 SHEET 2 C 2 ASP A 196 ILE A 197 -1 O ASP A 196 N LYS A 193 SHEET 1 D 4 ASP A 346 SER A 351 0 SHEET 2 D 4 ASP A 356 GLU A 361 -1 O VAL A 357 N ASP A 350 SHEET 3 D 4 ARG A 410 SER A 414 -1 O MET A 413 N ILE A 358 SHEET 4 D 4 ILE A 401 ASP A 405 -1 N PHE A 402 O MET A 412 SHEET 1 E 3 LYS A 419 LEU A 420 0 SHEET 2 E 3 PHE A 457 PHE A 459 -1 O PHE A 459 N LYS A 419 SHEET 3 E 3 LEU A 463 ILE A 465 -1 O TYR A 464 N ILE A 458 SHEET 1 F 2 VAL A 447 ILE A 448 0 SHEET 2 F 2 LYS A 472 ILE A 473 -1 O LYS A 472 N ILE A 448 SHEET 1 G 5 VAL B 24 MET B 31 0 SHEET 2 G 5 LYS B 12 THR B 19 -1 N THR B 13 O ILE B 30 SHEET 3 G 5 ILE B 2 GLU B 7 -1 N GLY B 5 O GLY B 16 SHEET 4 G 5 ILE B 68 GLY B 76 1 O ALA B 72 N LEU B 4 SHEET 5 G 5 ILE B 101 ASN B 105 1 O VAL B 104 N GLN B 75 SHEET 1 H 5 LYS B 142 GLU B 148 0 SHEET 2 H 5 THR B 133 VAL B 139 -1 N VAL B 135 O GLY B 147 SHEET 3 H 5 LEU B 124 VAL B 128 -1 N THR B 125 O ILE B 136 SHEET 4 H 5 GLU B 246 VAL B 250 1 O GLU B 246 N LEU B 124 SHEET 5 H 5 ASP B 273 TYR B 275 1 O ASP B 273 N VAL B 247 SHEET 1 I 2 VAL B 192 LYS B 193 0 SHEET 2 I 2 ASP B 196 ILE B 197 -1 O ASP B 196 N LYS B 193 SHEET 1 J 4 ASP B 346 TYR B 352 0 SHEET 2 J 4 PHE B 355 GLU B 361 -1 O GLU B 361 N ASP B 346 SHEET 3 J 4 ARG B 410 SER B 414 -1 O ILE B 411 N LYS B 360 SHEET 4 J 4 ILE B 401 ASP B 405 -1 N PHE B 402 O MET B 412 SHEET 1 K 3 LYS B 419 LEU B 420 0 SHEET 2 K 3 PHE B 457 PHE B 459 -1 O PHE B 459 N LYS B 419 SHEET 3 K 3 LEU B 463 ILE B 465 -1 O TYR B 464 N ILE B 458 SHEET 1 L 2 VAL B 447 ILE B 448 0 SHEET 2 L 2 LYS B 472 ILE B 473 -1 O LYS B 472 N ILE B 448 LINK NE2 HIS A 106 MG MG A 600 1555 1555 2.06 LINK NE2 HIS A 110 MG MG A 600 1555 1555 2.07 LINK OH TYR A 127 MG MG A 600 1555 1555 2.18 LINK OD1 ASP A 284 MG MG A 600 1555 1555 2.05 LINK NE2 HIS B 106 MG MG B 600 1555 1555 2.07 LINK NE2 HIS B 110 MG MG B 600 1555 1555 2.06 LINK OH TYR B 127 MG MG B 600 1555 1555 2.19 LINK OD1 ASP B 284 MG MG B 600 1555 1555 2.06 CISPEP 1 GLY A 76 PRO A 77 0 -1.68 CISPEP 2 HIS A 169 PRO A 170 0 -2.06 CISPEP 3 GLY B 76 PRO B 77 0 -2.96 CISPEP 4 HIS B 169 PRO B 170 0 -2.14 CISPEP 5 GLY B 342 ALA B 343 0 11.08 SITE 1 AC1 4 HIS A 106 HIS A 110 TYR A 127 ASP A 284 SITE 1 AC2 4 HIS B 106 HIS B 110 TYR B 127 ASP B 284 SITE 1 AC3 7 ASP A 500 GLU A 501 GLU A 504 PRO B 0 SITE 2 AC3 7 ASP B 21 GLU B 23 LEU B 25 SITE 1 AC4 2 ILE A 519 GLU A 522 CRYST1 148.730 148.730 136.420 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006724 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006724 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007330 0.00000