HEADER SPLICING 26-SEP-08 3EO2 TITLE CRYSTAL STRUCTURE OF THE RHOGEF DOMAIN OF HUMAN NEUROEPITHELIAL CELL- TITLE 2 TRANSFORMING GENE 1 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROEPITHELIAL CELL-TRANSFORMING GENE 1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 161-373; COMPND 5 SYNONYM: P65 NET1 PROTO-ONCOGENE, RHO GUANINE NUCLEOTIDE EXCHANGE COMPND 6 FACTOR 8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NET1, ARHGEF8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS RHOGEF, GUANINE NUCLEOTIDE EXCHANGE FACTOR, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, GUANINE-NUCLEOTIDE RELEASING FACTOR, NUCLEUS, KEYWDS 3 PROTO-ONCOGENE, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR L.NEDYALKOVA,Y.TONG,W.TEMPEL,F.MACKENZIE,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 2 C.BOUNTRA,J.WEIGELT,A.BOCHKAREV,H.PARK,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 6 06-SEP-23 3EO2 1 REMARK REVDAT 5 14-OCT-20 3EO2 1 REMARK SEQADV REVDAT 4 25-OCT-17 3EO2 1 REMARK REVDAT 3 13-JUL-11 3EO2 1 VERSN REVDAT 2 24-FEB-09 3EO2 1 VERSN REVDAT 1 07-OCT-08 3EO2 0 JRNL AUTH L.NEDYALKOVA,Y.TONG,W.TEMPEL,F.MACKENZIE,C.H.ARROWSMITH, JRNL AUTH 2 A.M.EDWARDS,C.BOUNTRA,J.WEIGELT,A.BOCHKAREV,H.PARK JRNL TITL CRYSTAL STRUCTURE OF THE RHOGEF DOMAIN OF HUMAN JRNL TITL 2 NEUROEPITHELIAL CELL-TRANSFORMING GENE 1 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 9653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.817 REMARK 3 FREE R VALUE TEST SET COUNT : 465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 418 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.4330 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.75200 REMARK 3 B22 (A**2) : -1.75200 REMARK 3 B33 (A**2) : 2.62800 REMARK 3 B12 (A**2) : -0.87600 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.382 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.270 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.241 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.361 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1497 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1018 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2033 ; 1.123 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2492 ; 0.863 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 186 ; 4.982 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;33.023 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 264 ;15.378 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;23.591 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 237 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1639 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 286 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 937 ; 0.885 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 370 ; 0.129 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1510 ; 1.578 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 560 ; 1.063 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 523 ; 1.845 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 168 A 354 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8632 -1.5764 1.0066 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.2683 REMARK 3 T33: 0.2398 T12: -0.0018 REMARK 3 T13: 0.0095 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 0.8980 L22: 4.8192 REMARK 3 L33: 1.7586 L12: -0.2418 REMARK 3 L13: 0.4841 L23: 0.6899 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: -0.0727 S13: -0.0734 REMARK 3 S21: -0.0321 S22: 0.0710 S23: -0.5568 REMARK 3 S31: -0.1124 S32: 0.4848 S33: -0.0613 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 U VALUES: RESIDUAL ONLY. ATOM RECORD CONTAINS RESIDUAL B FACTORS REMARK 3 ONLY. REMARK 4 REMARK 4 3EO2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9673 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2Z0Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M SODIUM CITRATE, 0.1M SODIUM REMARK 280 CACODYLATE, 5% ETHYLENE GLYCOL, CRYSTALLIZED IN THE PRESENCE OF REMARK 280 1:100 (W/W) SUBTILISIN, PH 4.8, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.96233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.92467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.96233 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.92467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ACCORDING TO THE AUTHORS THE REMARK 300 BIOLOGICAL UNIT IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -95.62900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 SER A 150 REMARK 465 SER A 151 REMARK 465 GLY A 152 REMARK 465 ARG A 153 REMARK 465 GLU A 154 REMARK 465 ASN A 155 REMARK 465 LEU A 156 REMARK 465 TYR A 157 REMARK 465 PHE A 158 REMARK 465 GLN A 159 REMARK 465 GLY A 160 REMARK 465 ASP A 161 REMARK 465 ILE A 162 REMARK 465 THR A 163 REMARK 465 MET A 164 REMARK 465 LYS A 165 REMARK 465 GLU A 166 REMARK 465 SER A 167 REMARK 465 LEU A 355 REMARK 465 LYS A 356 REMARK 465 LYS A 357 REMARK 465 GLY A 358 REMARK 465 GLU A 359 REMARK 465 SER A 360 REMARK 465 GLU A 361 REMARK 465 CYS A 362 REMARK 465 GLN A 363 REMARK 465 TYR A 364 REMARK 465 TYR A 365 REMARK 465 ILE A 366 REMARK 465 ASP A 367 REMARK 465 LYS A 368 REMARK 465 LEU A 369 REMARK 465 GLU A 370 REMARK 465 TYR A 371 REMARK 465 LEU A 372 REMARK 465 ASP A 373 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 ASP A 192 CG OD1 OD2 REMARK 470 LYS A 206 CE NZ REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 ARG A 264 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 270 CD OE1 NE2 REMARK 470 LEU A 271 CG CD1 CD2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 ARG A 292 NE CZ NH1 NH2 REMARK 470 LYS A 301 CE NZ REMARK 470 LYS A 317 CE NZ REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 LYS A 331 CG CD CE NZ REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 GLN A 337 CD OE1 NE2 REMARK 470 GLU A 340 CD OE1 OE2 REMARK 470 ASP A 341 OD1 OD2 REMARK 470 ILE A 346 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 293 CB CYS A 293 SG 0.145 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 293 CA - CB - SG ANGL. DEV. = 8.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 200 -67.71 -120.48 REMARK 500 LYS A 274 39.97 -82.04 REMARK 500 GLU A 332 30.53 -97.04 REMARK 500 ILE A 353 -31.31 -139.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 1 DBREF 3EO2 A 161 373 UNP Q7Z628 ARHG8_HUMAN 161 373 SEQADV 3EO2 MET A 143 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 144 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 145 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 146 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 147 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 148 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 149 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 SER A 150 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 SER A 151 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLY A 152 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 ARG A 153 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLU A 154 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 ASN A 155 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 LEU A 156 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 TYR A 157 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 PHE A 158 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLN A 159 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLY A 160 UNP Q7Z628 EXPRESSION TAG SEQRES 1 A 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 231 LEU TYR PHE GLN GLY ASP ILE THR MET LYS GLU SER LEU SEQRES 3 A 231 THR THR ARG GLU ILE ARG ARG GLN GLU ALA ILE TYR GLU SEQRES 4 A 231 MET SER ARG GLY GLU GLN ASP LEU ILE GLU ASP LEU LYS SEQRES 5 A 231 LEU ALA ARG LYS ALA TYR HIS ASP PRO MET LEU LYS LEU SEQRES 6 A 231 SER ILE MET SER GLU GLU GLU LEU THR HIS ILE PHE GLY SEQRES 7 A 231 ASP LEU ASP SER TYR ILE PRO LEU HIS GLU ASP LEU LEU SEQRES 8 A 231 THR ARG ILE GLY GLU ALA THR LYS PRO ASP GLY THR VAL SEQRES 9 A 231 GLU GLN ILE GLY HIS ILE LEU VAL SER TRP LEU PRO ARG SEQRES 10 A 231 LEU ASN ALA TYR ARG GLY TYR CYS SER ASN GLN LEU ALA SEQRES 11 A 231 ALA LYS ALA LEU LEU ASP GLN LYS LYS GLN ASP PRO ARG SEQRES 12 A 231 VAL GLN ASP PHE LEU GLN ARG CYS LEU GLU SER PRO PHE SEQRES 13 A 231 SER ARG LYS LEU ASP LEU TRP SER PHE LEU ASP ILE PRO SEQRES 14 A 231 ARG SER ARG LEU VAL LYS TYR PRO LEU LEU LEU LYS GLU SEQRES 15 A 231 ILE LEU LYS HIS THR PRO LYS GLU HIS PRO ASP VAL GLN SEQRES 16 A 231 LEU LEU GLU ASP ALA ILE LEU ILE ILE GLN GLY VAL LEU SEQRES 17 A 231 SER ASP ILE ASN LEU LYS LYS GLY GLU SER GLU CYS GLN SEQRES 18 A 231 TYR TYR ILE ASP LYS LEU GLU TYR LEU ASP HET UNX A 1 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 2 UNX X HELIX 1 1 THR A 169 TYR A 200 1 32 HELIX 2 2 TYR A 200 LEU A 207 1 8 HELIX 3 3 SER A 211 GLY A 220 1 10 HELIX 4 4 ASP A 221 THR A 240 1 20 HELIX 5 5 ILE A 249 LEU A 257 1 9 HELIX 6 6 PRO A 258 ALA A 262 5 5 HELIX 7 7 TYR A 263 SER A 268 1 6 HELIX 8 8 ASN A 269 LYS A 281 1 13 HELIX 9 9 ASP A 283 SER A 296 1 14 HELIX 10 10 ASP A 303 PHE A 307 5 5 HELIX 11 11 LEU A 308 HIS A 328 1 21 HELIX 12 12 PRO A 334 ASP A 352 1 19 SITE 1 AC1 2 LEU A 302 LEU A 304 CRYST1 95.629 95.629 62.887 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010457 0.006037 0.000000 0.00000 SCALE2 0.000000 0.012075 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015902 0.00000