HEADER SPLICING 26-SEP-08 3EO2 TITLE CRYSTAL STRUCTURE OF THE RHOGEF DOMAIN OF HUMAN NEUROEPITHELIAL CELL- TITLE 2 TRANSFORMING GENE 1 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROEPITHELIAL CELL-TRANSFORMING GENE 1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 161-373; COMPND 5 SYNONYM: P65 NET1 PROTO-ONCOGENE, RHO GUANINE NUCLEOTIDE EXCHANGE COMPND 6 FACTOR 8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NET1, ARHGEF8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS RHOGEF, GUANINE NUCLEOTIDE EXCHANGE FACTOR, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, GUANINE-NUCLEOTIDE RELEASING FACTOR, NUCLEUS, KEYWDS 3 PROTO-ONCOGENE, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR L.NEDYALKOVA,Y.TONG,W.TEMPEL,F.MACKENZIE,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 2 C.BOUNTRA,J.WEIGELT,A.BOCHKAREV,H.PARK,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 6 06-SEP-23 3EO2 1 REMARK REVDAT 5 14-OCT-20 3EO2 1 REMARK SEQADV REVDAT 4 25-OCT-17 3EO2 1 REMARK REVDAT 3 13-JUL-11 3EO2 1 VERSN REVDAT 2 24-FEB-09 3EO2 1 VERSN REVDAT 1 07-OCT-08 3EO2 0 JRNL AUTH L.NEDYALKOVA,Y.TONG,W.TEMPEL,F.MACKENZIE,C.H.ARROWSMITH, JRNL AUTH 2 A.M.EDWARDS,C.BOUNTRA,J.WEIGELT,A.BOCHKAREV,H.PARK JRNL TITL CRYSTAL STRUCTURE OF THE RHOGEF DOMAIN OF HUMAN JRNL TITL 2 NEUROEPITHELIAL CELL-TRANSFORMING GENE 1 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 9653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.817 REMARK 3 FREE R VALUE TEST SET COUNT : 465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 418 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.4330 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.75200 REMARK 3 B22 (A**2) : -1.75200 REMARK 3 B33 (A**2) : 2.62800 REMARK 3 B12 (A**2) : -0.87600 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.382 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.270 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.241 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.361 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1497 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1018 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2033 ; 1.123 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2492 ; 0.863 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 186 ; 4.982 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;33.023 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 264 ;15.378 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;23.591 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 237 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1639 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 286 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 937 ; 0.885 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 370 ; 0.129 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1510 ; 1.578 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 560 ; 1.063 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 523 ; 1.845 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 168 A 354 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8632 -1.5764 1.0066 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.2683 REMARK 3 T33: 0.2398 T12: -0.0018 REMARK 3 T13: 0.0095 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 0.8980 L22: 4.8192 REMARK 3 L33: 1.7586 L12: -0.2418 REMARK 3 L13: 0.4841 L23: 0.6899 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: -0.0727 S13: -0.0734 REMARK 3 S21: -0.0321 S22: 0.0710 S23: -0.5568 REMARK 3 S31: -0.1124 S32: 0.4848 S33: -0.0613 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 U VALUES: RESIDUAL ONLY. ATOM RECORD CONTAINS RESIDUAL B FACTORS REMARK 3 ONLY. REMARK 4 REMARK 4 3EO2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9673 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2Z0Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M SODIUM CITRATE, 0.1M SODIUM REMARK 280 CACODYLATE, 5% ETHYLENE GLYCOL, CRYSTALLIZED IN THE PRESENCE OF REMARK 280 1:100 (W/W) SUBTILISIN, PH 4.8, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.96233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.92467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.96233 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.92467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ACCORDING TO THE AUTHORS THE REMARK 300 BIOLOGICAL UNIT IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -95.62900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 SER A 150 REMARK 465 SER A 151 REMARK 465 GLY A 152 REMARK 465 ARG A 153 REMARK 465 GLU A 154 REMARK 465 ASN A 155 REMARK 465 LEU A 156 REMARK 465 TYR A 157 REMARK 465 PHE A 158 REMARK 465 GLN A 159 REMARK 465 GLY A 160 REMARK 465 ASP A 161 REMARK 465 ILE A 162 REMARK 465 THR A 163 REMARK 465 MET A 164 REMARK 465 LYS A 165 REMARK 465 GLU A 166 REMARK 465 SER A 167 REMARK 465 LEU A 355 REMARK 465 LYS A 356 REMARK 465 LYS A 357 REMARK 465 GLY A 358 REMARK 465 GLU A 359 REMARK 465 SER A 360 REMARK 465 GLU A 361 REMARK 465 CYS A 362 REMARK 465 GLN A 363 REMARK 465 TYR A 364 REMARK 465 TYR A 365 REMARK 465 ILE A 366 REMARK 465 ASP A 367 REMARK 465 LYS A 368 REMARK 465 LEU A 369 REMARK 465 GLU A 370 REMARK 465 TYR A 371 REMARK 465 LEU A 372 REMARK 465 ASP A 373 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 ASP A 192 CG OD1 OD2 REMARK 470 LYS A 206 CE NZ REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 ARG A 264 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 270 CD OE1 NE2 REMARK 470 LEU A 271 CG CD1 CD2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 ARG A 292 NE CZ NH1 NH2 REMARK 470 LYS A 301 CE NZ REMARK 470 LYS A 317 CE NZ REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 LYS A 331 CG CD CE NZ REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 GLN A 337 CD OE1 NE2 REMARK 470 GLU A 340 CD OE1 OE2 REMARK 470 ASP A 341 OD1 OD2 REMARK 470 ILE A 346 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 293 CB CYS A 293 SG 0.145 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 293 CA - CB - SG ANGL. DEV. = 8.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 200 -67.71 -120.48 REMARK 500 LYS A 274 39.97 -82.04 REMARK 500 GLU A 332 30.53 -97.04 REMARK 500 ILE A 353 -31.31 -139.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 1 DBREF 3EO2 A 161 373 UNP Q7Z628 ARHG8_HUMAN 161 373 SEQADV 3EO2 MET A 143 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 144 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 145 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 146 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 147 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 148 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 HIS A 149 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 SER A 150 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 SER A 151 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLY A 152 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 ARG A 153 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLU A 154 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 ASN A 155 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 LEU A 156 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 TYR A 157 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 PHE A 158 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLN A 159 UNP Q7Z628 EXPRESSION TAG SEQADV 3EO2 GLY A 160 UNP Q7Z628 EXPRESSION TAG SEQRES 1 A 231 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 231 LEU TYR PHE GLN GLY ASP ILE THR MET LYS GLU SER LEU SEQRES 3 A 231 THR THR ARG GLU ILE ARG ARG GLN GLU ALA ILE TYR GLU SEQRES 4 A 231 MET SER ARG GLY GLU GLN ASP LEU ILE GLU ASP LEU LYS SEQRES 5 A 231 LEU ALA ARG LYS ALA TYR HIS ASP PRO MET LEU LYS LEU SEQRES 6 A 231 SER ILE MET SER GLU GLU GLU LEU THR HIS ILE PHE GLY SEQRES 7 A 231 ASP LEU ASP SER TYR ILE PRO LEU HIS GLU ASP LEU LEU SEQRES 8 A 231 THR ARG ILE GLY GLU ALA THR LYS PRO ASP GLY THR VAL SEQRES 9 A 231 GLU GLN ILE GLY HIS ILE LEU VAL SER TRP LEU PRO ARG SEQRES 10 A 231 LEU ASN ALA TYR ARG GLY TYR CYS SER ASN GLN LEU ALA SEQRES 11 A 231 ALA LYS ALA LEU LEU ASP GLN LYS LYS GLN ASP PRO ARG SEQRES 12 A 231 VAL GLN ASP PHE LEU GLN ARG CYS LEU GLU SER PRO PHE SEQRES 13 A 231 SER ARG LYS LEU ASP LEU TRP SER PHE LEU ASP ILE PRO SEQRES 14 A 231 ARG SER ARG LEU VAL LYS TYR PRO LEU LEU LEU LYS GLU SEQRES 15 A 231 ILE LEU LYS HIS THR PRO LYS GLU HIS PRO ASP VAL GLN SEQRES 16 A 231 LEU LEU GLU ASP ALA ILE LEU ILE ILE GLN GLY VAL LEU SEQRES 17 A 231 SER ASP ILE ASN LEU LYS LYS GLY GLU SER GLU CYS GLN SEQRES 18 A 231 TYR TYR ILE ASP LYS LEU GLU TYR LEU ASP HET UNX A 1 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 2 UNX X HELIX 1 1 THR A 169 TYR A 200 1 32 HELIX 2 2 TYR A 200 LEU A 207 1 8 HELIX 3 3 SER A 211 GLY A 220 1 10 HELIX 4 4 ASP A 221 THR A 240 1 20 HELIX 5 5 ILE A 249 LEU A 257 1 9 HELIX 6 6 PRO A 258 ALA A 262 5 5 HELIX 7 7 TYR A 263 SER A 268 1 6 HELIX 8 8 ASN A 269 LYS A 281 1 13 HELIX 9 9 ASP A 283 SER A 296 1 14 HELIX 10 10 ASP A 303 PHE A 307 5 5 HELIX 11 11 LEU A 308 HIS A 328 1 21 HELIX 12 12 PRO A 334 ASP A 352 1 19 SITE 1 AC1 2 LEU A 302 LEU A 304 CRYST1 95.629 95.629 62.887 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010457 0.006037 0.000000 0.00000 SCALE2 0.000000 0.012075 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015902 0.00000 TER 1469 ASN A 354 HETATM 1470 UNK UNX A 1 -30.799 15.125 8.316 0.01 2.00 X MASTER 412 0 1 12 0 0 1 6 1469 1 0 18 END