HEADER LYASE 28-SEP-08 3EOL TITLE 2.0A CRYSTAL STRUCTURE OF ISOCITRATE LYASE FROM BRUCELLA MELITENSIS TITLE 2 (P43212) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOCITRATE LYASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.3.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA MELITENSIS; SOURCE 3 ORGANISM_TAXID: 29459; SOURCE 4 STRAIN: BIOVAR ABORTUS 2308; SOURCE 5 GENE: BMEI0409; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS BRUCELLA, MELITENSIS, ISOCITRATE, LYASE, SEATTLE STRUCTURAL GENOMICS KEYWDS 2 CENTER FOR INFECTIOUS DISEASE, SSGCID EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 21-FEB-24 3EOL 1 REMARK SEQADV REVDAT 3 13-JUL-11 3EOL 1 VERSN REVDAT 2 24-FEB-09 3EOL 1 VERSN REVDAT 1 21-OCT-08 3EOL 0 JRNL AUTH SSGCID JRNL TITL CRYSTAL STRUCTURES OF ISOCITRATE LYASE FROM BRUCELLA JRNL TITL 2 MELITENSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 62437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3161 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4299 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 229 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5596 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57000 REMARK 3 B22 (A**2) : -0.57000 REMARK 3 B33 (A**2) : 1.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.182 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.652 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5736 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7735 ; 1.200 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3 ; 0.489 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 716 ; 5.120 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 272 ;34.638 ;23.824 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 941 ;16.814 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;19.790 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 831 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4398 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2600 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3910 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 295 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 174 ; 0.171 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.192 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3680 ; 0.752 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5658 ; 1.191 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2341 ; 1.923 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2076 ; 3.128 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EOL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049580. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.7L REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62451 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 39.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.640 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.78 REMARK 200 R MERGE FOR SHELL (I) : 0.62500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.05M KH2PO4, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 140.79750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.85100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.85100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 211.19625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.85100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.85100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.39875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.85100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.85100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 211.19625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.85100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.85100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.39875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 140.79750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY A 85 REMARK 465 TRP A 86 REMARK 465 GLN A 87 REMARK 465 VAL A 88 REMARK 465 ALA A 89 REMARK 465 ALA A 90 REMARK 465 ASP A 91 REMARK 465 ALA A 92 REMARK 465 ASN A 93 REMARK 465 THR A 94 REMARK 465 ALA A 95 REMARK 465 SER A 96 REMARK 465 ALA A 97 REMARK 465 MET A 98 REMARK 465 TYR A 99 REMARK 465 PRO A 100 REMARK 465 ASP A 101 REMARK 465 GLN A 102 REMARK 465 SER A 103 REMARK 465 LEU A 104 REMARK 465 TYR A 105 REMARK 465 PRO A 106 REMARK 465 ALA A 107 REMARK 465 ALA A 150 REMARK 465 GLY A 151 REMARK 465 PHE A 152 REMARK 465 SER A 181 REMARK 465 GLU A 182 REMARK 465 LYS A 183 REMARK 465 LYS A 184 REMARK 465 CYS A 185 REMARK 465 GLY A 186 REMARK 465 HIS A 187 REMARK 465 LEU A 188 REMARK 465 GLY A 189 REMARK 465 LYS A 388 REMARK 465 HIS A 389 REMARK 465 GLN A 390 REMARK 465 ARG A 391 REMARK 465 GLU A 392 REMARK 465 VAL A 393 REMARK 465 GLY A 394 REMARK 465 THR A 395 REMARK 465 GLY A 408 REMARK 465 GLN A 409 REMARK 465 SER A 410 REMARK 465 SER A 411 REMARK 465 THR A 412 REMARK 465 THR A 413 REMARK 465 ALA A 414 REMARK 465 MET A 415 REMARK 465 LYS A 416 REMARK 465 GLU A 417 REMARK 465 SER A 418 REMARK 465 THR A 419 REMARK 465 GLU A 420 REMARK 465 THR A 421 REMARK 465 ALA A 422 REMARK 465 GLN A 423 REMARK 465 PHE A 424 REMARK 465 LYS A 425 REMARK 465 PRO A 426 REMARK 465 ALA A 427 REMARK 465 ALA A 428 REMARK 465 GLU A 429 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLY B 85 REMARK 465 TRP B 86 REMARK 465 GLN B 87 REMARK 465 VAL B 88 REMARK 465 ALA B 89 REMARK 465 ALA B 90 REMARK 465 ASP B 91 REMARK 465 ALA B 92 REMARK 465 ASN B 93 REMARK 465 THR B 94 REMARK 465 ALA B 95 REMARK 465 SER B 96 REMARK 465 ALA B 97 REMARK 465 MET B 98 REMARK 465 TYR B 99 REMARK 465 PRO B 100 REMARK 465 ASP B 101 REMARK 465 GLN B 102 REMARK 465 SER B 103 REMARK 465 LEU B 104 REMARK 465 TYR B 105 REMARK 465 PRO B 106 REMARK 465 ALA B 107 REMARK 465 ASN B 108 REMARK 465 ALA B 150 REMARK 465 GLY B 151 REMARK 465 PHE B 152 REMARK 465 SER B 181 REMARK 465 GLU B 182 REMARK 465 LYS B 183 REMARK 465 LYS B 184 REMARK 465 CYS B 185 REMARK 465 GLY B 186 REMARK 465 HIS B 187 REMARK 465 LEU B 188 REMARK 465 HIS B 389 REMARK 465 GLN B 390 REMARK 465 ARG B 391 REMARK 465 GLU B 392 REMARK 465 VAL B 393 REMARK 465 GLY B 394 REMARK 465 THR B 395 REMARK 465 GLY B 407 REMARK 465 GLY B 408 REMARK 465 GLN B 409 REMARK 465 SER B 410 REMARK 465 SER B 411 REMARK 465 THR B 412 REMARK 465 THR B 413 REMARK 465 ALA B 414 REMARK 465 MET B 415 REMARK 465 LYS B 416 REMARK 465 GLU B 417 REMARK 465 SER B 418 REMARK 465 THR B 419 REMARK 465 GLU B 420 REMARK 465 THR B 421 REMARK 465 ALA B 422 REMARK 465 GLN B 423 REMARK 465 PHE B 424 REMARK 465 LYS B 425 REMARK 465 PRO B 426 REMARK 465 ALA B 427 REMARK 465 ALA B 428 REMARK 465 GLU B 429 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 154 CB CG OD1 OD2 REMARK 470 THR A 406 CB OG1 CG2 REMARK 470 ASP B 154 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 343 O HOH A 478 2.10 REMARK 500 NE ARG A 291 O HOH A 505 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP B 138 O HOH A 443 1545 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 148 42.67 -93.15 REMARK 500 PRO A 216 37.92 -84.68 REMARK 500 GLN A 365 -126.52 51.06 REMARK 500 ALA A 386 31.00 -73.48 REMARK 500 ASP B 154 -143.78 -94.94 REMARK 500 PRO B 216 38.73 -78.96 REMARK 500 GLN B 365 -119.02 48.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 431 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BRABA.00014.A RELATED DB: TARGETDB REMARK 900 RELATED ID: 3EOM RELATED DB: PDB REMARK 900 RELATED ID: 3EON RELATED DB: PDB REMARK 900 RELATED ID: 3EOO RELATED DB: PDB DBREF 3EOL A 1 429 UNP Q8YIN4 Q8YIN4_BRUME 1 429 DBREF 3EOL B 1 429 UNP Q8YIN4 Q8YIN4_BRUME 1 429 SEQADV 3EOL GLY A -3 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL PRO A -2 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL GLY A -1 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL SER A 0 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL GLY B -3 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL PRO B -2 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL GLY B -1 UNP Q8YIN4 EXPRESSION TAG SEQADV 3EOL SER B 0 UNP Q8YIN4 EXPRESSION TAG SEQRES 1 A 433 GLY PRO GLY SER MET THR ASP PHE TYR SER LEU ILE PRO SEQRES 2 A 433 SER ALA PRO LYS GLY ARG PHE ASP GLY ILE GLU ARG ALA SEQRES 3 A 433 HIS THR ALA GLU ASP VAL LYS ARG LEU ARG GLY SER VAL SEQRES 4 A 433 GLU ILE LYS TYR SER LEU ALA GLU MET GLY ALA ASN ARG SEQRES 5 A 433 LEU TRP LYS LEU ILE HIS GLU GLU ASP PHE VAL ASN ALA SEQRES 6 A 433 LEU GLY ALA LEU SER GLY ASN GLN ALA MET GLN MET VAL SEQRES 7 A 433 ARG ALA GLY LEU LYS ALA ILE TYR LEU SER GLY TRP GLN SEQRES 8 A 433 VAL ALA ALA ASP ALA ASN THR ALA SER ALA MET TYR PRO SEQRES 9 A 433 ASP GLN SER LEU TYR PRO ALA ASN ALA GLY PRO GLU LEU SEQRES 10 A 433 ALA LYS ARG ILE ASN ARG THR LEU GLN ARG ALA ASP GLN SEQRES 11 A 433 ILE GLU THR ALA GLU GLY LYS GLY LEU SER VAL ASP THR SEQRES 12 A 433 TRP PHE ALA PRO ILE VAL ALA ASP ALA GLU ALA GLY PHE SEQRES 13 A 433 GLY ASP PRO LEU ASP ALA PHE GLU ILE MET LYS ALA TYR SEQRES 14 A 433 ILE GLU ALA GLY ALA ALA GLY VAL HIS PHE GLU ASP GLN SEQRES 15 A 433 LEU ALA SER GLU LYS LYS CYS GLY HIS LEU GLY GLY LYS SEQRES 16 A 433 VAL LEU ILE PRO THR ALA ALA HIS ILE ARG ASN LEU ASN SEQRES 17 A 433 ALA ALA ARG LEU ALA ALA ASP VAL MET GLY THR PRO THR SEQRES 18 A 433 LEU ILE VAL ALA ARG THR ASP ALA GLU ALA ALA LYS LEU SEQRES 19 A 433 LEU THR SER ASP ILE ASP GLU ARG ASP GLN PRO PHE VAL SEQRES 20 A 433 ASP TYR GLU ALA GLY ARG THR ALA GLU GLY PHE TYR GLN SEQRES 21 A 433 VAL LYS ASN GLY ILE GLU PRO CYS ILE ALA ARG ALA ILE SEQRES 22 A 433 ALA TYR ALA PRO TYR CYS ASP LEU ILE TRP MET GLU THR SEQRES 23 A 433 SER LYS PRO ASP LEU ALA GLN ALA ARG ARG PHE ALA GLU SEQRES 24 A 433 ALA VAL HIS LYS ALA HIS PRO GLY LYS LEU LEU ALA TYR SEQRES 25 A 433 ASN CYS SER PRO SER PHE ASN TRP LYS LYS ASN LEU ASP SEQRES 26 A 433 ASP ALA THR ILE ALA LYS PHE GLN ARG GLU LEU GLY ALA SEQRES 27 A 433 MET GLY TYR LYS PHE GLN PHE ILE THR LEU ALA GLY PHE SEQRES 28 A 433 HIS GLN LEU ASN TYR GLY MET PHE GLU LEU ALA ARG GLY SEQRES 29 A 433 TYR LYS ASP ARG GLN MET ALA ALA TYR SER GLU LEU GLN SEQRES 30 A 433 GLN ALA GLU PHE ALA ALA GLU ALA ASP GLY TYR THR ALA SEQRES 31 A 433 THR LYS HIS GLN ARG GLU VAL GLY THR GLY TYR PHE ASP SEQRES 32 A 433 ALA VAL SER LEU ALA ILE THR GLY GLY GLN SER SER THR SEQRES 33 A 433 THR ALA MET LYS GLU SER THR GLU THR ALA GLN PHE LYS SEQRES 34 A 433 PRO ALA ALA GLU SEQRES 1 B 433 GLY PRO GLY SER MET THR ASP PHE TYR SER LEU ILE PRO SEQRES 2 B 433 SER ALA PRO LYS GLY ARG PHE ASP GLY ILE GLU ARG ALA SEQRES 3 B 433 HIS THR ALA GLU ASP VAL LYS ARG LEU ARG GLY SER VAL SEQRES 4 B 433 GLU ILE LYS TYR SER LEU ALA GLU MET GLY ALA ASN ARG SEQRES 5 B 433 LEU TRP LYS LEU ILE HIS GLU GLU ASP PHE VAL ASN ALA SEQRES 6 B 433 LEU GLY ALA LEU SER GLY ASN GLN ALA MET GLN MET VAL SEQRES 7 B 433 ARG ALA GLY LEU LYS ALA ILE TYR LEU SER GLY TRP GLN SEQRES 8 B 433 VAL ALA ALA ASP ALA ASN THR ALA SER ALA MET TYR PRO SEQRES 9 B 433 ASP GLN SER LEU TYR PRO ALA ASN ALA GLY PRO GLU LEU SEQRES 10 B 433 ALA LYS ARG ILE ASN ARG THR LEU GLN ARG ALA ASP GLN SEQRES 11 B 433 ILE GLU THR ALA GLU GLY LYS GLY LEU SER VAL ASP THR SEQRES 12 B 433 TRP PHE ALA PRO ILE VAL ALA ASP ALA GLU ALA GLY PHE SEQRES 13 B 433 GLY ASP PRO LEU ASP ALA PHE GLU ILE MET LYS ALA TYR SEQRES 14 B 433 ILE GLU ALA GLY ALA ALA GLY VAL HIS PHE GLU ASP GLN SEQRES 15 B 433 LEU ALA SER GLU LYS LYS CYS GLY HIS LEU GLY GLY LYS SEQRES 16 B 433 VAL LEU ILE PRO THR ALA ALA HIS ILE ARG ASN LEU ASN SEQRES 17 B 433 ALA ALA ARG LEU ALA ALA ASP VAL MET GLY THR PRO THR SEQRES 18 B 433 LEU ILE VAL ALA ARG THR ASP ALA GLU ALA ALA LYS LEU SEQRES 19 B 433 LEU THR SER ASP ILE ASP GLU ARG ASP GLN PRO PHE VAL SEQRES 20 B 433 ASP TYR GLU ALA GLY ARG THR ALA GLU GLY PHE TYR GLN SEQRES 21 B 433 VAL LYS ASN GLY ILE GLU PRO CYS ILE ALA ARG ALA ILE SEQRES 22 B 433 ALA TYR ALA PRO TYR CYS ASP LEU ILE TRP MET GLU THR SEQRES 23 B 433 SER LYS PRO ASP LEU ALA GLN ALA ARG ARG PHE ALA GLU SEQRES 24 B 433 ALA VAL HIS LYS ALA HIS PRO GLY LYS LEU LEU ALA TYR SEQRES 25 B 433 ASN CYS SER PRO SER PHE ASN TRP LYS LYS ASN LEU ASP SEQRES 26 B 433 ASP ALA THR ILE ALA LYS PHE GLN ARG GLU LEU GLY ALA SEQRES 27 B 433 MET GLY TYR LYS PHE GLN PHE ILE THR LEU ALA GLY PHE SEQRES 28 B 433 HIS GLN LEU ASN TYR GLY MET PHE GLU LEU ALA ARG GLY SEQRES 29 B 433 TYR LYS ASP ARG GLN MET ALA ALA TYR SER GLU LEU GLN SEQRES 30 B 433 GLN ALA GLU PHE ALA ALA GLU ALA ASP GLY TYR THR ALA SEQRES 31 B 433 THR LYS HIS GLN ARG GLU VAL GLY THR GLY TYR PHE ASP SEQRES 32 B 433 ALA VAL SER LEU ALA ILE THR GLY GLY GLN SER SER THR SEQRES 33 B 433 THR ALA MET LYS GLU SER THR GLU THR ALA GLN PHE LYS SEQRES 34 B 433 PRO ALA ALA GLU HET GOL A 430 6 HET PEG B 430 7 HET PEG B 431 7 HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 PEG 2(C4 H10 O3) FORMUL 6 HOH *224(H2 O) HELIX 1 1 THR A 24 GLY A 33 1 10 HELIX 2 2 TYR A 39 GLU A 56 1 18 HELIX 3 3 SER A 66 ALA A 76 1 11 HELIX 4 4 ASN A 108 GLU A 131 1 24 HELIX 5 5 ASP A 154 GLY A 169 1 16 HELIX 6 6 PRO A 195 GLY A 214 1 20 HELIX 7 7 ASP A 239 VAL A 243 5 5 HELIX 8 8 GLY A 260 ALA A 272 1 13 HELIX 9 9 PRO A 273 CYS A 275 5 3 HELIX 10 10 ASP A 286 HIS A 301 1 16 HELIX 11 11 ASN A 315 LEU A 320 1 6 HELIX 12 12 ASP A 321 MET A 335 1 15 HELIX 13 13 LEU A 344 GLN A 365 1 22 HELIX 14 14 GLN A 365 GLU A 380 1 16 HELIX 15 15 ALA A 381 GLY A 383 5 3 HELIX 16 16 GLY A 396 THR A 406 1 11 HELIX 17 17 THR B 24 LEU B 31 1 8 HELIX 18 18 TYR B 39 GLU B 56 1 18 HELIX 19 19 SER B 66 ALA B 76 1 11 HELIX 20 20 ALA B 109 GLU B 131 1 23 HELIX 21 21 ASP B 154 GLY B 169 1 16 HELIX 22 22 PRO B 195 GLY B 214 1 20 HELIX 23 23 ASP B 239 VAL B 243 5 5 HELIX 24 24 ASP B 244 GLY B 248 5 5 HELIX 25 25 GLY B 260 ALA B 272 1 13 HELIX 26 26 PRO B 273 CYS B 275 5 3 HELIX 27 27 ASP B 286 HIS B 301 1 16 HELIX 28 28 ASN B 315 LEU B 320 1 6 HELIX 29 29 ASP B 321 MET B 335 1 15 HELIX 30 30 LEU B 344 GLN B 365 1 22 HELIX 31 31 GLN B 365 GLU B 380 1 16 HELIX 32 32 GLY B 396 THR B 406 1 11 SHEET 1 A 8 VAL A 59 LEU A 62 0 SHEET 2 A 8 TYR A 337 ILE A 342 1 O LYS A 338 N VAL A 59 SHEET 3 A 8 LEU A 306 ASN A 309 1 N TYR A 308 O PHE A 339 SHEET 4 A 8 LEU A 277 MET A 280 1 N ILE A 278 O ALA A 307 SHEET 5 A 8 LEU A 218 THR A 223 1 N ALA A 221 O TRP A 279 SHEET 6 A 8 GLY A 172 GLU A 176 1 N PHE A 175 O ARG A 222 SHEET 7 A 8 ILE A 144 ASP A 147 1 N ALA A 146 O HIS A 174 SHEET 8 A 8 ILE A 81 LEU A 83 1 N ILE A 81 O VAL A 145 SHEET 1 B 3 VAL A 192 LEU A 193 0 SHEET 2 B 3 LEU A 230 LEU A 231 1 O LEU A 230 N LEU A 193 SHEET 3 B 3 TYR A 255 GLN A 256 -1 O TYR A 255 N LEU A 231 SHEET 1 C 8 VAL B 59 LEU B 62 0 SHEET 2 C 8 TYR B 337 ILE B 342 1 O LYS B 338 N VAL B 59 SHEET 3 C 8 LEU B 306 ASN B 309 1 N TYR B 308 O PHE B 339 SHEET 4 C 8 LEU B 277 MET B 280 1 N ILE B 278 O ALA B 307 SHEET 5 C 8 LEU B 218 THR B 223 1 N ALA B 221 O TRP B 279 SHEET 6 C 8 GLY B 172 GLU B 176 1 N PHE B 175 O ARG B 222 SHEET 7 C 8 ILE B 144 ASP B 147 1 N ALA B 146 O HIS B 174 SHEET 8 C 8 ILE B 81 LEU B 83 1 N ILE B 81 O VAL B 145 SHEET 1 D 3 VAL B 192 LEU B 193 0 SHEET 2 D 3 LEU B 230 LEU B 231 1 O LEU B 230 N LEU B 193 SHEET 3 D 3 TYR B 255 GLN B 256 -1 O TYR B 255 N LEU B 231 SITE 1 AC1 5 ILE A 200 ARG A 238 TYR A 274 HOH A 454 SITE 2 AC1 5 HOH A 529 SITE 1 AC2 2 TYR B 245 ARG B 330 SITE 1 AC3 7 ALA B 197 ILE B 200 ARG B 238 ALA B 270 SITE 2 AC3 7 TYR B 274 HOH B 444 HOH B 477 CRYST1 79.702 79.702 281.595 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012547 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003551 0.00000