data_3EPG # _entry.id 3EPG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EPG pdb_00003epg 10.2210/pdb3epg/pdb NDB PD1189 ? ? RCSB RCSB049611 ? ? WWPDB D_1000049611 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ALZ 'Structure of DNA polymerase iota with template guanine and incoming dCTP' unspecified PDB 2FLP 'Binary structure of DNA polymerase iota with template guanine' unspecified PDB 3epi . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3EPG _pdbx_database_status.recvd_initial_deposition_date 2008-09-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Pence, M.G.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Lesion bypass of N2-ethylguanine by human DNA polymerase iota.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 1732 _citation.page_last 1740 _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18984581 _citation.pdbx_database_id_DOI 10.1074/jbc.M807296200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pence, M.G.' 1 ? primary 'Blans, P.' 2 ? primary 'Zink, C.N.' 3 ? primary 'Hollis, T.' 4 ? primary 'Fishbein, J.C.' 5 ? primary 'Perrino, F.W.' 6 ? # _cell.entry_id 3EPG _cell.length_a 98.535 _cell.length_b 98.535 _cell.length_c 202.354 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EPG _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? 'Catalytic Fragment (UNP residues 1-420)' ? 2 polymer syn "5'-D(*DTP*DCP*DTP*(2EG)P*DGP*DGP*DGP*DTP*DCP*DCP*DTP*DAP*DGP*DGP*DAP*DCP*DCP*(DOC))-3'" 5520.607 2 ? ? ? ? 3 non-polymer syn "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" 467.157 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 5 water nat water 18.015 69 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RAD30 homolog B, Eta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; A ? 2 polydeoxyribonucleotide no yes '(DT)(DC)(DT)(2EG)(DG)(DG)(DG)(DT)(DC)(DC)(DT)(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' TCTGGGGTCCTAGGACCC B,C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LEU n 1 4 ALA n 1 5 ASP n 1 6 VAL n 1 7 GLY n 1 8 ALA n 1 9 ALA n 1 10 ALA n 1 11 SER n 1 12 SER n 1 13 GLN n 1 14 GLY n 1 15 VAL n 1 16 HIS n 1 17 ASP n 1 18 GLN n 1 19 VAL n 1 20 LEU n 1 21 PRO n 1 22 THR n 1 23 PRO n 1 24 ASN n 1 25 ALA n 1 26 SER n 1 27 SER n 1 28 ARG n 1 29 VAL n 1 30 ILE n 1 31 VAL n 1 32 HIS n 1 33 VAL n 1 34 ASP n 1 35 LEU n 1 36 ASP n 1 37 CYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 GLN n 1 42 VAL n 1 43 GLU n 1 44 MET n 1 45 ILE n 1 46 SER n 1 47 ASN n 1 48 PRO n 1 49 GLU n 1 50 LEU n 1 51 LYS n 1 52 ASP n 1 53 LYS n 1 54 PRO n 1 55 LEU n 1 56 GLY n 1 57 VAL n 1 58 GLN n 1 59 GLN n 1 60 LYS n 1 61 TYR n 1 62 LEU n 1 63 VAL n 1 64 VAL n 1 65 THR n 1 66 CYS n 1 67 ASN n 1 68 TYR n 1 69 GLU n 1 70 ALA n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 LYS n 1 77 LYS n 1 78 LEU n 1 79 MET n 1 80 ASN n 1 81 VAL n 1 82 ARG n 1 83 ASP n 1 84 ALA n 1 85 LYS n 1 86 GLU n 1 87 LYS n 1 88 CYS n 1 89 PRO n 1 90 GLN n 1 91 LEU n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 ASN n 1 96 GLY n 1 97 GLU n 1 98 ASP n 1 99 LEU n 1 100 THR n 1 101 ARG n 1 102 TYR n 1 103 ARG n 1 104 GLU n 1 105 MET n 1 106 SER n 1 107 TYR n 1 108 LYS n 1 109 VAL n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 LEU n 1 114 GLU n 1 115 GLU n 1 116 PHE n 1 117 SER n 1 118 PRO n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 GLY n 1 125 PHE n 1 126 ASP n 1 127 GLU n 1 128 ASN n 1 129 PHE n 1 130 VAL n 1 131 ASP n 1 132 LEU n 1 133 THR n 1 134 GLU n 1 135 MET n 1 136 VAL n 1 137 GLU n 1 138 LYS n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 GLN n 1 143 LEU n 1 144 GLN n 1 145 SER n 1 146 ASP n 1 147 GLU n 1 148 LEU n 1 149 SER n 1 150 ALA n 1 151 VAL n 1 152 THR n 1 153 VAL n 1 154 SER n 1 155 GLY n 1 156 HIS n 1 157 VAL n 1 158 TYR n 1 159 ASN n 1 160 ASN n 1 161 GLN n 1 162 SER n 1 163 ILE n 1 164 ASN n 1 165 LEU n 1 166 LEU n 1 167 ASP n 1 168 VAL n 1 169 LEU n 1 170 HIS n 1 171 ILE n 1 172 ARG n 1 173 LEU n 1 174 LEU n 1 175 VAL n 1 176 GLY n 1 177 SER n 1 178 GLN n 1 179 ILE n 1 180 ALA n 1 181 ALA n 1 182 GLU n 1 183 MET n 1 184 ARG n 1 185 GLU n 1 186 ALA n 1 187 MET n 1 188 TYR n 1 189 ASN n 1 190 GLN n 1 191 LEU n 1 192 GLY n 1 193 LEU n 1 194 THR n 1 195 GLY n 1 196 CYS n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 ALA n 1 201 SER n 1 202 ASN n 1 203 LYS n 1 204 LEU n 1 205 LEU n 1 206 ALA n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 SER n 1 211 GLY n 1 212 VAL n 1 213 PHE n 1 214 LYS n 1 215 PRO n 1 216 ASN n 1 217 GLN n 1 218 GLN n 1 219 THR n 1 220 VAL n 1 221 LEU n 1 222 LEU n 1 223 PRO n 1 224 GLU n 1 225 SER n 1 226 CYS n 1 227 GLN n 1 228 HIS n 1 229 LEU n 1 230 ILE n 1 231 HIS n 1 232 SER n 1 233 LEU n 1 234 ASN n 1 235 HIS n 1 236 ILE n 1 237 LYS n 1 238 GLU n 1 239 ILE n 1 240 PRO n 1 241 GLY n 1 242 ILE n 1 243 GLY n 1 244 TYR n 1 245 LYS n 1 246 THR n 1 247 ALA n 1 248 LYS n 1 249 CYS n 1 250 LEU n 1 251 GLU n 1 252 ALA n 1 253 LEU n 1 254 GLY n 1 255 ILE n 1 256 ASN n 1 257 SER n 1 258 VAL n 1 259 ARG n 1 260 ASP n 1 261 LEU n 1 262 GLN n 1 263 THR n 1 264 PHE n 1 265 SER n 1 266 PRO n 1 267 LYS n 1 268 ILE n 1 269 LEU n 1 270 GLU n 1 271 LYS n 1 272 GLU n 1 273 LEU n 1 274 GLY n 1 275 ILE n 1 276 SER n 1 277 VAL n 1 278 ALA n 1 279 GLN n 1 280 ARG n 1 281 ILE n 1 282 GLN n 1 283 LYS n 1 284 LEU n 1 285 SER n 1 286 PHE n 1 287 GLY n 1 288 GLU n 1 289 ASP n 1 290 ASN n 1 291 SER n 1 292 PRO n 1 293 VAL n 1 294 ILE n 1 295 LEU n 1 296 SER n 1 297 GLY n 1 298 PRO n 1 299 PRO n 1 300 GLN n 1 301 SER n 1 302 PHE n 1 303 SER n 1 304 GLU n 1 305 GLU n 1 306 ASP n 1 307 SER n 1 308 PHE n 1 309 LYS n 1 310 LYS n 1 311 CYS n 1 312 SER n 1 313 SER n 1 314 GLU n 1 315 VAL n 1 316 GLU n 1 317 ALA n 1 318 LYS n 1 319 ASN n 1 320 LYS n 1 321 ILE n 1 322 GLU n 1 323 GLU n 1 324 LEU n 1 325 LEU n 1 326 ALA n 1 327 SER n 1 328 LEU n 1 329 LEU n 1 330 ASN n 1 331 ARG n 1 332 VAL n 1 333 CYS n 1 334 GLN n 1 335 ASP n 1 336 GLY n 1 337 ARG n 1 338 LYS n 1 339 PRO n 1 340 HIS n 1 341 THR n 1 342 VAL n 1 343 ARG n 1 344 LEU n 1 345 ILE n 1 346 ILE n 1 347 ARG n 1 348 ARG n 1 349 TYR n 1 350 SER n 1 351 SER n 1 352 GLU n 1 353 LYS n 1 354 HIS n 1 355 TYR n 1 356 GLY n 1 357 ARG n 1 358 GLU n 1 359 SER n 1 360 ARG n 1 361 GLN n 1 362 CYS n 1 363 PRO n 1 364 ILE n 1 365 PRO n 1 366 SER n 1 367 HIS n 1 368 VAL n 1 369 ILE n 1 370 GLN n 1 371 LYS n 1 372 LEU n 1 373 GLY n 1 374 THR n 1 375 GLY n 1 376 ASN n 1 377 TYR n 1 378 ASP n 1 379 VAL n 1 380 MET n 1 381 THR n 1 382 PRO n 1 383 MET n 1 384 VAL n 1 385 ASP n 1 386 ILE n 1 387 LEU n 1 388 MET n 1 389 LYS n 1 390 LEU n 1 391 PHE n 1 392 ARG n 1 393 ASN n 1 394 MET n 1 395 VAL n 1 396 ASN n 1 397 VAL n 1 398 LYS n 1 399 MET n 1 400 PRO n 1 401 PHE n 1 402 HIS n 1 403 LEU n 1 404 THR n 1 405 LEU n 1 406 LEU n 1 407 SER n 1 408 VAL n 1 409 CYS n 1 410 PHE n 1 411 CYS n 1 412 ASN n 1 413 LEU n 1 414 LYS n 1 415 ALA n 1 416 LEU n 1 417 ASN n 1 418 THR n 1 419 ALA n 1 420 LYS n 2 1 DT n 2 2 DC n 2 3 DT n 2 4 2EG n 2 5 DG n 2 6 DG n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DA n 2 13 DG n 2 14 DG n 2 15 DA n 2 16 DC n 2 17 DC n 2 18 DOC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, POLI (amino acids 1-420), RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'MBP-DNA pol Iota Fusion with PreScission Protease cleavage site' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) Rosetta 2 cells' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMAL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;A self-annealing oligonucletoide was synthesized by Midland Certified Reagents containing N2-ethylgaunine using phosphoramidite chemistry ; # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 1 ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; 1 ? 2 PDB 3EPG 3EPG 2 TCTGGGGTCCTAGGACCC -4 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EPG A 1 ? 420 ? Q9UNA4 1 ? 420 ? 1 420 2 2 3EPG B 1 ? 18 ? 3EPG -4 ? 13 ? -4 13 3 2 3EPG C 1 ? 18 ? 3EPG 837 ? 854 ? 837 854 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2EG 'DNA linking' n ;2'-DEOXY-N-ETHYLGUANOSINE 5'-PHOSPHATE ; ? 'C12 H18 N5 O7 P' 375.274 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DCP non-polymer . "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" ? 'C9 H16 N3 O13 P3' 467.157 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3EPG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '12-15% PEG MME 5000, 0.2-0.4M Ammonium Sulfate, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K' # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG MME 5000' ? ? ? 1 2 1 'Ammonium Sulfate' ? ? ? 1 3 1 MES ? ? ? 1 4 2 'PEG MME 5000' ? ? ? 1 5 2 'Ammonium Sulfate' ? ? ? 1 6 2 MES ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2006-11-21 _diffrn_detector.details Confocal # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Ni Filter' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3EPG _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 15.00 _reflns.d_resolution_high 2.2 _reflns.number_obs 19625 _reflns.number_all 30150 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.122 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 17.77 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 90.6 _reflns_shell.Rmerge_I_obs 0.400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.1 _reflns_shell.pdbx_redundancy 11.73 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3EPG _refine.ls_number_reflns_obs 19625 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.07 _refine.ls_R_factor_obs 0.23671 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23435 _refine.ls_R_factor_R_free 0.28284 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1046 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.922 _refine.correlation_coeff_Fo_to_Fc_free 0.885 _refine.B_iso_mean 34.125 _refine.aniso_B[1][1] 0.48 _refine.aniso_B[2][2] 0.48 _refine.aniso_B[3][3] -0.72 _refine.aniso_B[1][2] 0.24 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model '2ALZ minus DNA' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.427 _refine.pdbx_overall_ESU_R_Free 0.296 _refine.overall_SU_ML 0.243 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 22.590 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2896 _refine_hist.pdbx_number_atoms_nucleic_acid 310 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 3307 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 3288 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.806 2.124 ? 4513 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.830 5.000 ? 371 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.711 24.715 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.237 15.000 ? 527 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.628 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.138 0.200 ? 535 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2310 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.247 0.200 ? 1501 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 2211 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.203 0.200 ? 122 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.431 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.301 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.516 1.500 ? 1869 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.968 2.000 ? 3011 'X-RAY DIFFRACTION' ? r_scbond_it 1.574 3.000 ? 1498 'X-RAY DIFFRACTION' ? r_scangle_it 2.519 4.500 ? 1502 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_R_work 1418 _refine_ls_shell.R_factor_R_work 0.363 _refine_ls_shell.percent_reflns_obs 99.87 _refine_ls_shell.R_factor_R_free 0.362 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3EPG _struct.title 'Structure of Human DNA Polymerase Iota complexed with N2-ethylguanine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EPG _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text ;DNA pol iota, lesion bypass, N2-ethylguanine, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, TRANSFERASE-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 37 ? ASN A 47 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 PRO A 48 ? LYS A 51 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 3 ASN A 67 ? LYS A 72 ? ASN A 67 LYS A 72 1 ? 6 HELX_P HELX_P4 4 VAL A 81 ? LYS A 87 ? VAL A 81 LYS A 87 1 ? 7 HELX_P HELX_P5 5 LEU A 99 ? SER A 117 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 6 LEU A 132 ? GLN A 141 ? LEU A 132 GLN A 141 1 ? 10 HELX_P HELX_P7 7 SER A 145 ? SER A 149 ? SER A 145 SER A 149 5 ? 5 HELX_P HELX_P8 8 ASN A 159 ? GLN A 161 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P9 9 ASP A 167 ? GLY A 192 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P10 10 ASN A 202 ? GLY A 211 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P11 11 LEU A 222 ? GLU A 224 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P12 12 SER A 225 ? LEU A 233 ? SER A 225 LEU A 233 1 ? 9 HELX_P HELX_P13 13 HIS A 235 ? ILE A 239 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P14 14 GLY A 243 ? GLY A 254 ? GLY A 243 GLY A 254 1 ? 12 HELX_P HELX_P15 15 SER A 257 ? THR A 263 ? SER A 257 THR A 263 1 ? 7 HELX_P HELX_P16 16 SER A 265 ? GLY A 274 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P17 17 GLY A 274 ? PHE A 286 ? GLY A 274 PHE A 286 1 ? 13 HELX_P HELX_P18 18 SER A 313 ? GLY A 336 ? SER A 313 GLY A 336 1 ? 24 HELX_P HELX_P19 19 PRO A 365 ? GLN A 370 ? PRO A 365 GLN A 370 1 ? 6 HELX_P HELX_P20 20 VAL A 379 ? ASN A 393 ? VAL A 379 ASN A 393 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 17 "O3'" ? ? ? 1_555 B DOC 18 P ? ? B DC 12 B DOC 13 1_555 ? ? ? ? ? ? ? 1.502 ? ? covale2 covale one ? C 2EG 4 "O3'" ? ? ? 1_555 C DG 5 P ? ? C 2EG 840 C DG 841 1_555 ? ? ? ? ? ? ? 1.532 ? ? metalc1 metalc ? ? A LYS 237 O ? ? ? 1_555 E NA . NA ? ? A LYS 237 A NA 421 1_555 ? ? ? ? ? ? ? 2.559 ? ? metalc2 metalc ? ? A ILE 239 O ? ? ? 1_555 E NA . NA ? ? A ILE 239 A NA 421 1_555 ? ? ? ? ? ? ? 2.474 ? ? metalc3 metalc ? ? A ILE 242 O ? ? ? 1_555 E NA . NA ? ? A ILE 242 A NA 421 1_555 ? ? ? ? ? ? ? 2.714 ? ? metalc4 metalc ? ? E NA . NA ? ? ? 1_555 B DC 17 OP1 ? ? A NA 421 B DC 12 1_555 ? ? ? ? ? ? ? 2.605 ? ? hydrog1 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 7 C DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 7 C DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 8 C DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 8 C DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 8 C DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 9 C DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 9 C DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 9 C DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 15 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 10 C DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 15 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 10 C DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC 11 C DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC 11 C DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC 11 C DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 17 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 12 C DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 17 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 12 C DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 17 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 12 C DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DOC 18 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DOC 13 C DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DOC 18 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DOC 13 C DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DOC 18 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DOC 13 C DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 214 A . ? LYS 214 A PRO 215 A ? PRO 215 A 1 1.73 2 TYR 349 A . ? TYR 349 A SER 350 A ? SER 350 A 1 -2.66 3 TYR 355 A . ? TYR 355 A GLY 356 A ? GLY 356 A 1 7.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 120 ? LEU A 123 ? VAL A 120 LEU A 123 A 2 GLU A 127 ? ASP A 131 ? GLU A 127 ASP A 131 A 3 ILE A 30 ? LEU A 35 ? ILE A 30 LEU A 35 A 4 GLY A 195 ? ALA A 200 ? GLY A 195 ALA A 200 A 5 GLN A 218 ? VAL A 220 ? GLN A 218 VAL A 220 A 6 HIS A 156 ? VAL A 157 ? HIS A 156 VAL A 157 B 1 MET A 79 ? ASN A 80 ? MET A 79 ASN A 80 B 2 LEU A 62 ? CYS A 66 ? LEU A 62 CYS A 66 B 3 LEU A 55 ? GLN A 59 ? LEU A 55 GLN A 59 B 4 VAL A 92 ? ASN A 95 ? VAL A 92 ASN A 95 C 1 PHE A 302 ? SER A 307 ? PHE A 302 SER A 307 C 2 LEU A 405 ? LYS A 414 ? LEU A 405 LYS A 414 C 3 LYS A 338 ? ARG A 347 ? LYS A 338 ARG A 347 C 4 ARG A 357 ? PRO A 363 ? ARG A 357 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 123 ? N LEU A 123 O GLU A 127 ? O GLU A 127 A 2 3 O ASN A 128 ? O ASN A 128 N VAL A 33 ? N VAL A 33 A 3 4 N ILE A 30 ? N ILE A 30 O ALA A 200 ? O ALA A 200 A 4 5 N VAL A 199 ? N VAL A 199 O THR A 219 ? O THR A 219 A 5 6 O GLN A 218 ? O GLN A 218 N HIS A 156 ? N HIS A 156 B 1 2 O MET A 79 ? O MET A 79 N VAL A 63 ? N VAL A 63 B 2 3 O THR A 65 ? O THR A 65 N VAL A 57 ? N VAL A 57 B 3 4 N GLN A 58 ? N GLN A 58 O VAL A 94 ? O VAL A 94 C 1 2 N ASP A 306 ? N ASP A 306 O LEU A 406 ? O LEU A 406 C 2 3 O LYS A 414 ? O LYS A 414 N LYS A 338 ? N LYS A 338 C 3 4 N LEU A 344 ? N LEU A 344 O ARG A 360 ? O ARG A 360 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DCP 875 ? 15 'BINDING SITE FOR RESIDUE DCP A 875' AC2 Software A NA 421 ? 4 'BINDING SITE FOR RESIDUE NA A 421' AC3 Software A NA 422 ? 1 'BINDING SITE FOR RESIDUE NA A 422' AC4 Software C NA 1 ? 1 'BINDING SITE FOR RESIDUE NA C 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 ASP A 34 ? ASP A 34 . ? 1_555 ? 2 AC1 15 LEU A 35 ? LEU A 35 . ? 1_555 ? 3 AC1 15 CYS A 37 ? CYS A 37 . ? 1_555 ? 4 AC1 15 PHE A 38 ? PHE A 38 . ? 1_555 ? 5 AC1 15 TYR A 39 ? TYR A 39 . ? 1_555 ? 6 AC1 15 VAL A 64 ? VAL A 64 . ? 1_555 ? 7 AC1 15 THR A 65 ? THR A 65 . ? 1_555 ? 8 AC1 15 TYR A 68 ? TYR A 68 . ? 1_555 ? 9 AC1 15 ARG A 71 ? ARG A 71 . ? 1_555 ? 10 AC1 15 LYS A 77 ? LYS A 77 . ? 1_555 ? 11 AC1 15 ASP A 126 ? ASP A 126 . ? 1_555 ? 12 AC1 15 LYS A 214 ? LYS A 214 . ? 1_555 ? 13 AC1 15 DOC B 18 ? DOC B 13 . ? 1_555 ? 14 AC1 15 2EG C 4 ? 2EG C 840 . ? 1_555 ? 15 AC1 15 DG C 5 ? DG C 841 . ? 1_555 ? 16 AC2 4 LYS A 237 ? LYS A 237 . ? 1_555 ? 17 AC2 4 ILE A 239 ? ILE A 239 . ? 1_555 ? 18 AC2 4 ILE A 242 ? ILE A 242 . ? 1_555 ? 19 AC2 4 DC B 17 ? DC B 12 . ? 1_555 ? 20 AC3 1 GLU A 115 ? GLU A 115 . ? 1_555 ? 21 AC4 1 DC C 9 ? DC C 845 . ? 1_555 ? # _database_PDB_matrix.entry_id 3EPG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3EPG _atom_sites.fract_transf_matrix[1][1] 0.010149 _atom_sites.fract_transf_matrix[1][2] 0.005859 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011719 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004942 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 GLY 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ALA 9 9 ? ? ? A . n A 1 10 ALA 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 GLN 13 13 ? ? ? A . n A 1 14 GLY 14 14 ? ? ? A . n A 1 15 VAL 15 15 ? ? ? A . n A 1 16 HIS 16 16 ? ? ? A . n A 1 17 ASP 17 17 ? ? ? A . n A 1 18 GLN 18 18 ? ? ? A . n A 1 19 VAL 19 19 ? ? ? A . n A 1 20 LEU 20 20 ? ? ? A . n A 1 21 PRO 21 21 ? ? ? A . n A 1 22 THR 22 22 ? ? ? A . n A 1 23 PRO 23 23 ? ? ? A . n A 1 24 ASN 24 24 ? ? ? A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 MET 135 135 135 MET MET A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 HIS 170 170 170 HIS HIS A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 MET 183 183 183 MET MET A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 CYS 196 196 196 CYS CYS A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 PRO 223 223 223 PRO PRO A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 CYS 226 226 226 CYS CYS A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 HIS 231 231 231 HIS HIS A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 ALA 247 247 247 ALA ALA A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 CYS 249 249 249 CYS CYS A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 SER 276 276 276 SER SER A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 ARG 280 280 280 ARG ARG A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 GLN 282 282 282 GLN GLN A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 ASN 290 290 290 ASN ASN A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 LEU 295 295 295 LEU LEU A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 GLY 297 297 297 GLY GLY A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 PRO 299 299 299 PRO PRO A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 CYS 311 311 311 CYS CYS A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 LYS 318 318 318 LYS LYS A . n A 1 319 ASN 319 319 319 ASN ASN A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 LEU 325 325 325 LEU LEU A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 SER 327 327 327 SER SER A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 ASN 330 330 330 ASN ASN A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 VAL 332 332 332 VAL VAL A . n A 1 333 CYS 333 333 333 CYS CYS A . n A 1 334 GLN 334 334 334 GLN GLN A . n A 1 335 ASP 335 335 335 ASP ASP A . n A 1 336 GLY 336 336 336 GLY GLY A . n A 1 337 ARG 337 337 337 ARG ARG A . n A 1 338 LYS 338 338 338 LYS LYS A . n A 1 339 PRO 339 339 339 PRO PRO A . n A 1 340 HIS 340 340 340 HIS HIS A . n A 1 341 THR 341 341 341 THR THR A . n A 1 342 VAL 342 342 342 VAL VAL A . n A 1 343 ARG 343 343 343 ARG ARG A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 ILE 345 345 345 ILE ILE A . n A 1 346 ILE 346 346 346 ILE ILE A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ARG 348 348 348 ARG ARG A . n A 1 349 TYR 349 349 349 TYR TYR A . n A 1 350 SER 350 350 350 SER SER A . n A 1 351 SER 351 351 ? ? ? A . n A 1 352 GLU 352 352 ? ? ? A . n A 1 353 LYS 353 353 ? ? ? A . n A 1 354 HIS 354 354 ? ? ? A . n A 1 355 TYR 355 355 355 TYR TYR A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 ARG 357 357 357 ARG ARG A . n A 1 358 GLU 358 358 358 GLU GLU A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 GLN 361 361 361 GLN GLN A . n A 1 362 CYS 362 362 362 CYS CYS A . n A 1 363 PRO 363 363 363 PRO PRO A . n A 1 364 ILE 364 364 364 ILE ILE A . n A 1 365 PRO 365 365 365 PRO PRO A . n A 1 366 SER 366 366 366 SER SER A . n A 1 367 HIS 367 367 367 HIS HIS A . n A 1 368 VAL 368 368 368 VAL VAL A . n A 1 369 ILE 369 369 369 ILE ILE A . n A 1 370 GLN 370 370 370 GLN GLN A . n A 1 371 LYS 371 371 371 LYS LYS A . n A 1 372 LEU 372 372 ? ? ? A . n A 1 373 GLY 373 373 ? ? ? A . n A 1 374 THR 374 374 ? ? ? A . n A 1 375 GLY 375 375 ? ? ? A . n A 1 376 ASN 376 376 ? ? ? A . n A 1 377 TYR 377 377 ? ? ? A . n A 1 378 ASP 378 378 378 ASP ASP A . n A 1 379 VAL 379 379 379 VAL VAL A . n A 1 380 MET 380 380 380 MET MET A . n A 1 381 THR 381 381 381 THR THR A . n A 1 382 PRO 382 382 382 PRO PRO A . n A 1 383 MET 383 383 383 MET MET A . n A 1 384 VAL 384 384 384 VAL VAL A . n A 1 385 ASP 385 385 385 ASP ASP A . n A 1 386 ILE 386 386 386 ILE ILE A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 MET 388 388 388 MET MET A . n A 1 389 LYS 389 389 389 LYS LYS A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 PHE 391 391 391 PHE PHE A . n A 1 392 ARG 392 392 392 ARG ARG A . n A 1 393 ASN 393 393 393 ASN ASN A . n A 1 394 MET 394 394 394 MET MET A . n A 1 395 VAL 395 395 395 VAL VAL A . n A 1 396 ASN 396 396 396 ASN ASN A . n A 1 397 VAL 397 397 397 VAL VAL A . n A 1 398 LYS 398 398 ? ? ? A . n A 1 399 MET 399 399 ? ? ? A . n A 1 400 PRO 400 400 ? ? ? A . n A 1 401 PHE 401 401 ? ? ? A . n A 1 402 HIS 402 402 ? ? ? A . n A 1 403 LEU 403 403 403 LEU LEU A . n A 1 404 THR 404 404 404 THR THR A . n A 1 405 LEU 405 405 405 LEU LEU A . n A 1 406 LEU 406 406 406 LEU LEU A . n A 1 407 SER 407 407 407 SER SER A . n A 1 408 VAL 408 408 408 VAL VAL A . n A 1 409 CYS 409 409 409 CYS CYS A . n A 1 410 PHE 410 410 410 PHE PHE A . n A 1 411 CYS 411 411 411 CYS CYS A . n A 1 412 ASN 412 412 412 ASN ASN A . n A 1 413 LEU 413 413 413 LEU LEU A . n A 1 414 LYS 414 414 414 LYS LYS A . n A 1 415 ALA 415 415 ? ? ? A . n A 1 416 LEU 416 416 ? ? ? A . n A 1 417 ASN 417 417 ? ? ? A . n A 1 418 THR 418 418 ? ? ? A . n A 1 419 ALA 419 419 ? ? ? A . n A 1 420 LYS 420 420 ? ? ? A . n B 2 1 DT 1 -4 ? ? ? B . n B 2 2 DC 2 -3 ? ? ? B . n B 2 3 DT 3 -2 ? ? ? B . n B 2 4 2EG 4 -1 ? ? ? B . n B 2 5 DG 5 0 ? ? ? B . n B 2 6 DG 6 1 ? ? ? B . n B 2 7 DG 7 2 ? ? ? B . n B 2 8 DT 8 3 ? ? ? B . n B 2 9 DC 9 4 ? ? ? B . n B 2 10 DC 10 5 ? ? ? B . n B 2 11 DT 11 6 ? ? ? B . n B 2 12 DA 12 7 7 DA DA B . n B 2 13 DG 13 8 8 DG DG B . n B 2 14 DG 14 9 9 DG DG B . n B 2 15 DA 15 10 10 DA DA B . n B 2 16 DC 16 11 11 DC DC B . n B 2 17 DC 17 12 12 DC DC B . n B 2 18 DOC 18 13 13 DOC DOC B . n C 2 1 DT 1 837 ? ? ? C . n C 2 2 DC 2 838 ? ? ? C . n C 2 3 DT 3 839 ? ? ? C . n C 2 4 2EG 4 840 840 2EG 2EG C . n C 2 5 DG 5 841 841 DG DG C . n C 2 6 DG 6 842 842 DG DG C . n C 2 7 DG 7 843 843 DG DG C . n C 2 8 DT 8 844 844 DT DT C . n C 2 9 DC 9 845 845 DC DC C . n C 2 10 DC 10 846 846 DC DC C . n C 2 11 DT 11 847 847 DT DT C . n C 2 12 DA 12 848 ? ? ? C . n C 2 13 DG 13 849 ? ? ? C . n C 2 14 DG 14 850 ? ? ? C . n C 2 15 DA 15 851 ? ? ? C . n C 2 16 DC 16 852 ? ? ? C . n C 2 17 DC 17 853 ? ? ? C . n C 2 18 DOC 18 854 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 DCP 1 875 875 DCP DCP A . E 4 NA 1 421 1 NA NA A . F 4 NA 1 422 2 NA NA A . G 4 NA 1 423 1 NA NA A . H 4 NA 1 1 1 NA NA C . I 5 HOH 1 424 1 HOH HOH A . I 5 HOH 2 425 3 HOH HOH A . I 5 HOH 3 426 4 HOH HOH A . I 5 HOH 4 427 5 HOH HOH A . I 5 HOH 5 428 7 HOH HOH A . I 5 HOH 6 429 8 HOH HOH A . I 5 HOH 7 430 9 HOH HOH A . I 5 HOH 8 431 10 HOH HOH A . I 5 HOH 9 432 11 HOH HOH A . I 5 HOH 10 433 13 HOH HOH A . I 5 HOH 11 434 14 HOH HOH A . I 5 HOH 12 435 15 HOH HOH A . I 5 HOH 13 436 17 HOH HOH A . I 5 HOH 14 437 18 HOH HOH A . I 5 HOH 15 438 20 HOH HOH A . I 5 HOH 16 439 21 HOH HOH A . I 5 HOH 17 440 24 HOH HOH A . I 5 HOH 18 441 26 HOH HOH A . I 5 HOH 19 442 27 HOH HOH A . I 5 HOH 20 443 28 HOH HOH A . I 5 HOH 21 444 29 HOH HOH A . I 5 HOH 22 445 31 HOH HOH A . I 5 HOH 23 446 32 HOH HOH A . I 5 HOH 24 447 34 HOH HOH A . I 5 HOH 25 448 35 HOH HOH A . I 5 HOH 26 449 36 HOH HOH A . I 5 HOH 27 450 37 HOH HOH A . I 5 HOH 28 451 39 HOH HOH A . I 5 HOH 29 452 40 HOH HOH A . I 5 HOH 30 453 41 HOH HOH A . I 5 HOH 31 454 42 HOH HOH A . I 5 HOH 32 455 43 HOH HOH A . I 5 HOH 33 456 44 HOH HOH A . I 5 HOH 34 457 45 HOH HOH A . I 5 HOH 35 458 46 HOH HOH A . I 5 HOH 36 459 47 HOH HOH A . I 5 HOH 37 460 48 HOH HOH A . I 5 HOH 38 461 50 HOH HOH A . I 5 HOH 39 462 51 HOH HOH A . I 5 HOH 40 463 52 HOH HOH A . I 5 HOH 41 464 53 HOH HOH A . I 5 HOH 42 465 54 HOH HOH A . I 5 HOH 43 466 55 HOH HOH A . I 5 HOH 44 467 56 HOH HOH A . I 5 HOH 45 468 57 HOH HOH A . I 5 HOH 46 469 58 HOH HOH A . I 5 HOH 47 470 59 HOH HOH A . I 5 HOH 48 471 60 HOH HOH A . I 5 HOH 49 472 61 HOH HOH A . I 5 HOH 50 473 62 HOH HOH A . I 5 HOH 51 474 63 HOH HOH A . I 5 HOH 52 475 64 HOH HOH A . I 5 HOH 53 476 65 HOH HOH A . I 5 HOH 54 477 66 HOH HOH A . I 5 HOH 55 478 67 HOH HOH A . I 5 HOH 56 479 68 HOH HOH A . I 5 HOH 57 480 69 HOH HOH A . I 5 HOH 58 481 70 HOH HOH A . I 5 HOH 59 482 71 HOH HOH A . I 5 HOH 60 483 72 HOH HOH A . I 5 HOH 61 484 73 HOH HOH A . I 5 HOH 62 485 74 HOH HOH A . I 5 HOH 63 486 75 HOH HOH A . I 5 HOH 64 487 76 HOH HOH A . I 5 HOH 65 488 77 HOH HOH A . I 5 HOH 66 489 78 HOH HOH A . I 5 HOH 67 490 79 HOH HOH A . J 5 HOH 1 23 23 HOH HOH C . J 5 HOH 2 49 49 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B DOC 18 B DOC 13 ? DC "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" 2 C 2EG 4 C 2EG 840 ? G ;2'-DEOXY-N-ETHYLGUANOSINE 5'-PHOSPHATE ; # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_445 -y-1,-x-1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 -49.2675000000 -0.8660254038 -0.5000000000 0.0000000000 -85.3338131619 0.0000000000 0.0000000000 -1.0000000000 33.7256666667 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 237 ? A LYS 237 ? 1_555 NA ? E NA . ? A NA 421 ? 1_555 O ? A ILE 239 ? A ILE 239 ? 1_555 103.6 ? 2 O ? A LYS 237 ? A LYS 237 ? 1_555 NA ? E NA . ? A NA 421 ? 1_555 O ? A ILE 242 ? A ILE 242 ? 1_555 82.6 ? 3 O ? A ILE 239 ? A ILE 239 ? 1_555 NA ? E NA . ? A NA 421 ? 1_555 O ? A ILE 242 ? A ILE 242 ? 1_555 83.0 ? 4 O ? A LYS 237 ? A LYS 237 ? 1_555 NA ? E NA . ? A NA 421 ? 1_555 OP1 ? B DC 17 ? B DC 12 ? 1_555 151.5 ? 5 O ? A ILE 239 ? A ILE 239 ? 1_555 NA ? E NA . ? A NA 421 ? 1_555 OP1 ? B DC 17 ? B DC 12 ? 1_555 91.6 ? 6 O ? A ILE 242 ? A ILE 242 ? 1_555 NA ? E NA . ? A NA 421 ? 1_555 OP1 ? B DC 17 ? B DC 12 ? 1_555 75.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 18 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -0.3470 -17.3270 21.3510 -0.0620 -0.0578 0.0576 -0.1182 0.0016 0.0980 8.5998 4.7823 11.1272 -0.3128 6.0795 -1.4022 -0.3745 0.1067 0.6346 0.5012 -0.2793 -1.3135 -0.8267 1.2782 0.6539 'X-RAY DIFFRACTION' 2 ? refined -16.7440 -16.0960 3.8290 -0.1752 -0.2545 -0.2489 0.0337 0.0287 -0.0272 2.0999 1.5517 7.1519 0.6249 -1.2166 -0.6420 0.0236 0.1450 0.0986 -0.2308 -0.1083 0.2046 -0.3418 -0.5995 0.0847 'X-RAY DIFFRACTION' 3 ? refined -2.5420 -36.5410 9.3980 0.1720 -0.0373 0.1031 -0.0497 0.0436 0.0789 1.0463 0.7296 4.1136 0.3610 -1.5072 -0.4831 -0.0402 -0.2903 -0.6459 0.1499 -0.2969 -0.4943 0.9515 0.5259 0.3371 'X-RAY DIFFRACTION' 4 ? refined -9.6200 -43.0140 33.2490 0.3634 0.1086 -0.0323 -0.2715 -0.1320 0.2421 7.3924 11.1150 6.3145 1.0261 3.7197 -0.7787 0.3159 -0.6563 -0.4836 0.9276 0.0439 -0.0575 0.5091 -0.4501 -0.3597 'X-RAY DIFFRACTION' 5 ? refined -6.5710 -39.2930 16.6790 -0.0904 -0.0938 0.0374 -0.0689 -0.0403 0.0426 1.7554 3.4246 6.2816 0.6831 -1.5294 -1.0764 -0.0555 0.0643 -0.5171 -0.2769 -0.1009 -0.2992 0.4946 -0.1600 0.1564 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 25 ? ? A 105 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 107 ? ? A 230 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 231 ? ? A 324 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 325 ? ? A 414 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 C 841 ? ? C 847 ? ? ? ? 'X-RAY DIFFRACTION' 6 5 B 7 ? ? B 13 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 d*TREK 'data reduction' . ? 4 d*TREK 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C6 B DG 8 ? ? N1 B DG 8 ? ? 1.340 1.391 -0.051 0.007 N 2 1 C5 B DG 8 ? ? N7 B DG 8 ? ? 1.348 1.388 -0.040 0.006 N 3 1 C5 B DG 9 ? ? N7 B DG 9 ? ? 1.342 1.388 -0.046 0.006 N 4 1 C8 B DG 9 ? ? N9 B DG 9 ? ? 1.328 1.374 -0.046 0.007 N 5 1 N9 B DG 9 ? ? C4 B DG 9 ? ? 1.322 1.375 -0.053 0.008 N 6 1 N1 B DC 11 ? ? C6 B DC 11 ? ? 1.411 1.367 0.044 0.006 N 7 1 C2 B DC 11 ? ? N3 B DC 11 ? ? 1.407 1.353 0.054 0.008 N 8 1 N3 B DC 11 ? ? C4 B DC 11 ? ? 1.395 1.335 0.060 0.007 N 9 1 C5 B DC 11 ? ? C6 B DC 11 ? ? 1.402 1.339 0.063 0.008 N 10 1 N1 B DC 12 ? ? C6 B DC 12 ? ? 1.420 1.367 0.053 0.006 N 11 1 N3 B DC 12 ? ? C4 B DC 12 ? ? 1.423 1.335 0.088 0.007 N 12 1 C5 B DC 12 ? ? C6 B DC 12 ? ? 1.389 1.339 0.050 0.008 N 13 1 "O3'" B DC 12 ? ? P B DOC 13 ? ? 1.502 1.607 -0.105 0.012 Y 14 1 "O3'" C 2EG 840 ? ? P C DG 841 ? ? 1.532 1.607 -0.075 0.012 Y 15 1 N1 C DG 841 ? ? C2 C DG 841 ? ? 1.323 1.373 -0.050 0.008 N 16 1 C6 C DG 841 ? ? N1 C DG 841 ? ? 1.345 1.391 -0.046 0.007 N 17 1 C5 C DG 841 ? ? N7 C DG 841 ? ? 1.350 1.388 -0.038 0.006 N 18 1 N7 C DG 841 ? ? C8 C DG 841 ? ? 1.262 1.305 -0.043 0.006 N 19 1 C8 C DG 841 ? ? N9 C DG 841 ? ? 1.328 1.374 -0.046 0.007 N 20 1 P C DG 842 ? ? OP1 C DG 842 ? ? 1.383 1.485 -0.102 0.017 N 21 1 P C DG 842 ? ? OP2 C DG 842 ? ? 1.370 1.485 -0.115 0.017 N 22 1 P C DG 842 ? ? "O5'" C DG 842 ? ? 1.418 1.593 -0.175 0.010 N 23 1 C6 C DG 842 ? ? N1 C DG 842 ? ? 1.336 1.391 -0.055 0.007 N 24 1 C5 C DG 842 ? ? N7 C DG 842 ? ? 1.286 1.388 -0.102 0.006 N 25 1 C8 C DG 842 ? ? N9 C DG 842 ? ? 1.284 1.374 -0.090 0.007 N 26 1 N9 C DG 842 ? ? C4 C DG 842 ? ? 1.303 1.375 -0.072 0.008 N 27 1 "O3'" C DG 842 ? ? P C DG 843 ? ? 1.521 1.607 -0.086 0.012 Y 28 1 C5 C DG 843 ? ? N7 C DG 843 ? ? 1.343 1.388 -0.045 0.006 N 29 1 N7 C DG 843 ? ? C8 C DG 843 ? ? 1.346 1.305 0.041 0.006 N 30 1 "O3'" C DG 843 ? ? P C DT 844 ? ? 1.532 1.607 -0.075 0.012 Y 31 1 P C DT 844 ? ? OP1 C DT 844 ? ? 1.377 1.485 -0.108 0.017 N 32 1 P C DT 844 ? ? "O5'" C DT 844 ? ? 1.513 1.593 -0.080 0.010 N 33 1 "O3'" C DT 844 ? ? "C3'" C DT 844 ? ? 1.375 1.419 -0.044 0.006 N 34 1 C2 C DT 844 ? ? N3 C DT 844 ? ? 1.316 1.373 -0.057 0.008 N 35 1 N3 C DT 844 ? ? C4 C DT 844 ? ? 1.316 1.382 -0.066 0.008 N 36 1 C4 C DT 844 ? ? C5 C DT 844 ? ? 1.383 1.445 -0.062 0.009 N 37 1 C2 C DT 844 ? ? O2 C DT 844 ? ? 1.172 1.220 -0.048 0.008 N 38 1 C4 C DT 844 ? ? O4 C DT 844 ? ? 1.158 1.228 -0.070 0.009 N 39 1 "O4'" C DC 845 ? ? "C1'" C DC 845 ? ? 1.304 1.418 -0.114 0.012 N 40 1 "O4'" C DC 845 ? ? "C4'" C DC 845 ? ? 1.313 1.446 -0.133 0.010 N 41 1 C4 C DC 845 ? ? N4 C DC 845 ? ? 1.278 1.335 -0.057 0.009 N 42 1 N1 C DC 845 ? ? C2 C DC 845 ? ? 1.337 1.397 -0.060 0.010 N 43 1 C4 C DC 845 ? ? C5 C DC 845 ? ? 1.350 1.425 -0.075 0.008 N 44 1 N1 C DC 846 ? ? C6 C DC 846 ? ? 1.404 1.367 0.037 0.006 N 45 1 C2 C DC 846 ? ? N3 C DC 846 ? ? 1.413 1.353 0.060 0.008 N 46 1 N3 C DC 846 ? ? C4 C DC 846 ? ? 1.402 1.335 0.067 0.007 N 47 1 C5 C DC 846 ? ? C6 C DC 846 ? ? 1.390 1.339 0.051 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? "C2'" B DG 8 ? ? 99.27 105.90 -6.63 0.80 N 2 1 "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? "C3'" B DG 9 ? ? 100.23 104.50 -4.27 0.40 N 3 1 "C1'" B DG 9 ? ? "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? 103.86 110.10 -6.24 1.00 N 4 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 113.88 108.30 5.58 0.30 N 5 1 C6 B DG 9 ? ? N1 B DG 9 ? ? C2 B DG 9 ? ? 119.78 125.10 -5.32 0.60 N 6 1 C2 B DG 9 ? ? N3 B DG 9 ? ? C4 B DG 9 ? ? 120.46 111.90 8.56 0.50 N 7 1 N3 B DG 9 ? ? C4 B DG 9 ? ? C5 B DG 9 ? ? 121.34 128.60 -7.26 0.50 N 8 1 C5 B DG 9 ? ? C6 B DG 9 ? ? N1 B DG 9 ? ? 118.12 111.50 6.62 0.50 N 9 1 C4 B DG 9 ? ? C5 B DG 9 ? ? N7 B DG 9 ? ? 106.07 110.80 -4.73 0.40 N 10 1 C5 B DG 9 ? ? N7 B DG 9 ? ? C8 B DG 9 ? ? 108.57 104.30 4.27 0.50 N 11 1 N7 B DG 9 ? ? C8 B DG 9 ? ? N9 B DG 9 ? ? 108.83 113.10 -4.27 0.50 N 12 1 C8 B DG 9 ? ? N9 B DG 9 ? ? C4 B DG 9 ? ? 108.90 106.40 2.50 0.40 N 13 1 N3 B DG 9 ? ? C4 B DG 9 ? ? N9 B DG 9 ? ? 131.03 126.00 5.03 0.60 N 14 1 C6 B DG 9 ? ? C5 B DG 9 ? ? N7 B DG 9 ? ? 134.25 130.40 3.85 0.60 N 15 1 C5 B DG 9 ? ? C6 B DG 9 ? ? O6 B DG 9 ? ? 122.49 128.60 -6.11 0.60 N 16 1 N3 B DC 11 ? ? C4 B DC 11 ? ? C5 B DC 11 ? ? 119.17 121.90 -2.73 0.40 N 17 1 "O4'" B DC 12 ? ? "C4'" B DC 12 ? ? "C3'" B DC 12 ? ? 101.31 104.50 -3.19 0.40 N 18 1 "C3'" C 2EG 840 ? ? "O3'" C 2EG 840 ? ? P C DG 841 ? ? 130.07 119.70 10.37 1.20 Y 19 1 "O3'" C 2EG 840 ? ? P C DG 841 ? ? OP1 C DG 841 ? ? 118.56 110.50 8.06 1.10 Y 20 1 "O3'" C DG 841 ? ? P C DG 842 ? ? "O5'" C DG 842 ? ? 92.36 104.00 -11.64 1.90 Y 21 1 "O5'" C DG 842 ? ? P C DG 842 ? ? OP1 C DG 842 ? ? 121.46 110.70 10.76 1.20 N 22 1 "C5'" C DG 842 ? ? "C4'" C DG 842 ? ? "C3'" C DG 842 ? ? 126.44 115.70 10.74 1.20 N 23 1 C6 C DG 842 ? ? N1 C DG 842 ? ? C2 C DG 842 ? ? 118.51 125.10 -6.59 0.60 N 24 1 C2 C DG 842 ? ? N3 C DG 842 ? ? C4 C DG 842 ? ? 121.40 111.90 9.50 0.50 N 25 1 N3 C DG 842 ? ? C4 C DG 842 ? ? C5 C DG 842 ? ? 118.39 128.60 -10.21 0.50 N 26 1 C5 C DG 842 ? ? C6 C DG 842 ? ? N1 C DG 842 ? ? 119.01 111.50 7.51 0.50 N 27 1 C4 C DG 842 ? ? C5 C DG 842 ? ? N7 C DG 842 ? ? 105.99 110.80 -4.81 0.40 N 28 1 C5 C DG 842 ? ? N7 C DG 842 ? ? C8 C DG 842 ? ? 108.99 104.30 4.69 0.50 N 29 1 N7 C DG 842 ? ? C8 C DG 842 ? ? N9 C DG 842 ? ? 109.87 113.10 -3.23 0.50 N 30 1 N9 C DG 842 ? ? C4 C DG 842 ? ? C5 C DG 842 ? ? 107.96 105.40 2.56 0.40 N 31 1 N3 C DG 842 ? ? C4 C DG 842 ? ? N9 C DG 842 ? ? 133.63 126.00 7.63 0.60 N 32 1 C5 C DG 842 ? ? C6 C DG 842 ? ? O6 C DG 842 ? ? 124.08 128.60 -4.52 0.60 N 33 1 "O4'" C DG 843 ? ? "C1'" C DG 843 ? ? N9 C DG 843 ? ? 103.74 108.00 -4.26 0.70 N 34 1 C6 C DG 843 ? ? N1 C DG 843 ? ? C2 C DG 843 ? ? 119.61 125.10 -5.49 0.60 N 35 1 C2 C DG 843 ? ? N3 C DG 843 ? ? C4 C DG 843 ? ? 120.97 111.90 9.07 0.50 N 36 1 N3 C DG 843 ? ? C4 C DG 843 ? ? C5 C DG 843 ? ? 121.17 128.60 -7.43 0.50 N 37 1 C5 C DG 843 ? ? C6 C DG 843 ? ? N1 C DG 843 ? ? 118.98 111.50 7.48 0.50 N 38 1 C4 C DG 843 ? ? C5 C DG 843 ? ? N7 C DG 843 ? ? 107.33 110.80 -3.47 0.40 N 39 1 C5 C DG 843 ? ? N7 C DG 843 ? ? C8 C DG 843 ? ? 107.58 104.30 3.28 0.50 N 40 1 N7 C DG 843 ? ? C8 C DG 843 ? ? N9 C DG 843 ? ? 109.46 113.10 -3.64 0.50 N 41 1 N3 C DG 843 ? ? C4 C DG 843 ? ? N9 C DG 843 ? ? 131.38 126.00 5.38 0.60 N 42 1 C6 C DG 843 ? ? C5 C DG 843 ? ? N7 C DG 843 ? ? 134.00 130.40 3.60 0.60 N 43 1 C5 C DG 843 ? ? C6 C DG 843 ? ? O6 C DG 843 ? ? 122.07 128.60 -6.53 0.60 N 44 1 "O4'" C DT 844 ? ? "C4'" C DT 844 ? ? "C3'" C DT 844 ? ? 98.64 104.50 -5.86 0.40 N 45 1 "C4'" C DT 844 ? ? "C3'" C DT 844 ? ? "C2'" C DT 844 ? ? 97.46 102.20 -4.74 0.70 N 46 1 "O4'" C DC 845 ? ? "C4'" C DC 845 ? ? "C3'" C DC 845 ? ? 97.91 104.50 -6.59 0.40 N 47 1 "C5'" C DC 845 ? ? "C4'" C DC 845 ? ? "C3'" C DC 845 ? ? 91.64 114.10 -22.46 1.80 N 48 1 "O4'" C DC 845 ? ? "C1'" C DC 845 ? ? "C2'" C DC 845 ? ? 97.62 105.90 -8.28 0.80 N 49 1 "O4'" C DC 845 ? ? "C1'" C DC 845 ? ? N1 C DC 845 ? ? 100.63 108.00 -7.37 0.70 N 50 1 C6 C DC 845 ? ? N1 C DC 845 ? ? C2 C DC 845 ? ? 117.31 120.30 -2.99 0.40 N 51 1 N3 C DC 845 ? ? C4 C DC 845 ? ? C5 C DC 845 ? ? 119.40 121.90 -2.50 0.40 N 52 1 N3 C DC 845 ? ? C2 C DC 845 ? ? O2 C DC 845 ? ? 117.57 121.90 -4.33 0.70 N 53 1 "O4'" C DC 846 ? ? "C1'" C DC 846 ? ? N1 C DC 846 ? ? 102.22 108.00 -5.78 0.70 N 54 1 N1 C DC 846 ? ? C2 C DC 846 ? ? O2 C DC 846 ? ? 123.11 118.90 4.21 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? 84.39 -0.89 2 1 PRO A 48 ? ? -34.66 -30.83 3 1 ASP A 52 ? ? 39.21 40.32 4 1 LYS A 60 ? ? 51.90 -127.13 5 1 GLU A 69 ? ? -66.60 10.33 6 1 ALA A 70 ? ? -147.38 -27.01 7 1 LEU A 73 ? ? -77.91 31.84 8 1 PHE A 116 ? ? -71.42 -72.49 9 1 GLN A 141 ? ? -32.47 -31.95 10 1 GLU A 147 ? ? -64.05 8.41 11 1 ASN A 160 ? ? 49.73 29.90 12 1 ALA A 200 ? ? -174.02 -175.88 13 1 PRO A 240 ? ? -58.52 108.94 14 1 LEU A 273 ? ? -147.94 -22.43 15 1 SER A 312 ? ? 133.85 82.39 16 1 SER A 313 ? ? 164.13 82.09 17 1 ASN A 319 ? ? -68.81 -70.93 18 1 CYS A 333 ? ? -59.11 -71.89 19 1 ASP A 335 ? ? -27.63 -50.30 20 1 GLN A 370 ? ? -64.42 88.28 21 1 ILE A 386 ? ? -31.07 -75.50 22 1 ASN A 396 ? ? -83.94 -79.97 23 1 CYS A 411 ? ? -132.52 -157.02 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ASP A 52 ? ? LYS A 53 ? ? 144.20 2 1 LYS A 87 ? ? CYS A 88 ? ? -138.73 3 1 CYS A 88 ? ? PRO A 89 ? ? -100.21 4 1 PRO A 89 ? ? GLN A 90 ? ? 128.02 5 1 GLN A 90 ? ? LEU A 91 ? ? 132.18 6 1 GLN A 141 ? ? GLN A 142 ? ? -147.46 7 1 LYS A 309 ? ? LYS A 310 ? ? 130.65 8 1 SER A 312 ? ? SER A 313 ? ? -146.56 9 1 SER A 313 ? ? GLU A 314 ? ? -141.08 10 1 GLU A 314 ? ? VAL A 315 ? ? -147.86 11 1 ASP A 378 ? ? VAL A 379 ? ? -141.72 12 1 ASN A 396 ? ? VAL A 397 ? ? -101.27 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 49 ? CG ? A GLU 49 CG 2 1 Y 1 A GLU 49 ? CD ? A GLU 49 CD 3 1 Y 1 A GLU 49 ? OE1 ? A GLU 49 OE1 4 1 Y 1 A GLU 49 ? OE2 ? A GLU 49 OE2 5 1 Y 1 A LYS 53 ? CG ? A LYS 53 CG 6 1 Y 1 A LYS 53 ? CD ? A LYS 53 CD 7 1 Y 1 A LYS 53 ? CE ? A LYS 53 CE 8 1 Y 1 A LYS 53 ? NZ ? A LYS 53 NZ 9 1 Y 1 A TYR 61 ? CG ? A TYR 61 CG 10 1 Y 1 A TYR 61 ? CD1 ? A TYR 61 CD1 11 1 Y 1 A TYR 61 ? CD2 ? A TYR 61 CD2 12 1 Y 1 A TYR 61 ? CE1 ? A TYR 61 CE1 13 1 Y 1 A TYR 61 ? CE2 ? A TYR 61 CE2 14 1 Y 1 A TYR 61 ? CZ ? A TYR 61 CZ 15 1 Y 1 A TYR 61 ? OH ? A TYR 61 OH 16 1 Y 1 A ARG 82 ? CG ? A ARG 82 CG 17 1 Y 1 A ARG 82 ? CD ? A ARG 82 CD 18 1 Y 1 A ARG 82 ? NE ? A ARG 82 NE 19 1 Y 1 A ARG 82 ? CZ ? A ARG 82 CZ 20 1 Y 1 A ARG 82 ? NH1 ? A ARG 82 NH1 21 1 Y 1 A ARG 82 ? NH2 ? A ARG 82 NH2 22 1 Y 1 A GLN 141 ? CG ? A GLN 141 CG 23 1 Y 1 A GLN 141 ? CD ? A GLN 141 CD 24 1 Y 1 A GLN 141 ? OE1 ? A GLN 141 OE1 25 1 Y 1 A GLN 141 ? NE2 ? A GLN 141 NE2 26 1 Y 1 A LEU 148 ? CG ? A LEU 148 CG 27 1 Y 1 A LEU 148 ? CD1 ? A LEU 148 CD1 28 1 Y 1 A LEU 148 ? CD2 ? A LEU 148 CD2 29 1 Y 1 A LYS 245 ? CG ? A LYS 245 CG 30 1 Y 1 A LYS 245 ? CD ? A LYS 245 CD 31 1 Y 1 A LYS 245 ? CE ? A LYS 245 CE 32 1 Y 1 A LYS 245 ? NZ ? A LYS 245 NZ 33 1 Y 1 A LYS 248 ? CG ? A LYS 248 CG 34 1 Y 1 A LYS 248 ? CD ? A LYS 248 CD 35 1 Y 1 A LYS 248 ? CE ? A LYS 248 CE 36 1 Y 1 A LYS 248 ? NZ ? A LYS 248 NZ 37 1 Y 1 A LYS 267 ? CG ? A LYS 267 CG 38 1 Y 1 A LYS 267 ? CD ? A LYS 267 CD 39 1 Y 1 A LYS 267 ? CE ? A LYS 267 CE 40 1 Y 1 A LYS 267 ? NZ ? A LYS 267 NZ 41 1 Y 1 A LYS 271 ? CG ? A LYS 271 CG 42 1 Y 1 A LYS 271 ? CD ? A LYS 271 CD 43 1 Y 1 A LYS 271 ? CE ? A LYS 271 CE 44 1 Y 1 A LYS 271 ? NZ ? A LYS 271 NZ 45 1 Y 1 A SER 276 ? OG ? A SER 276 OG 46 1 Y 1 A GLU 316 ? CG ? A GLU 316 CG 47 1 Y 1 A GLU 316 ? CD ? A GLU 316 CD 48 1 Y 1 A GLU 316 ? OE1 ? A GLU 316 OE1 49 1 Y 1 A GLU 316 ? OE2 ? A GLU 316 OE2 50 1 Y 1 A TYR 349 ? CG ? A TYR 349 CG 51 1 Y 1 A TYR 349 ? CD1 ? A TYR 349 CD1 52 1 Y 1 A TYR 349 ? CD2 ? A TYR 349 CD2 53 1 Y 1 A TYR 349 ? CE1 ? A TYR 349 CE1 54 1 Y 1 A TYR 349 ? CE2 ? A TYR 349 CE2 55 1 Y 1 A TYR 349 ? CZ ? A TYR 349 CZ 56 1 Y 1 A TYR 349 ? OH ? A TYR 349 OH 57 1 Y 1 A LYS 371 ? CG ? A LYS 371 CG 58 1 Y 1 A LYS 371 ? CD ? A LYS 371 CD 59 1 Y 1 A LYS 371 ? CE ? A LYS 371 CE 60 1 Y 1 A LYS 371 ? NZ ? A LYS 371 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A GLY 7 ? A GLY 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A ALA 9 ? A ALA 9 10 1 Y 1 A ALA 10 ? A ALA 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A GLN 13 ? A GLN 13 14 1 Y 1 A GLY 14 ? A GLY 14 15 1 Y 1 A VAL 15 ? A VAL 15 16 1 Y 1 A HIS 16 ? A HIS 16 17 1 Y 1 A ASP 17 ? A ASP 17 18 1 Y 1 A GLN 18 ? A GLN 18 19 1 Y 1 A VAL 19 ? A VAL 19 20 1 Y 1 A LEU 20 ? A LEU 20 21 1 Y 1 A PRO 21 ? A PRO 21 22 1 Y 1 A THR 22 ? A THR 22 23 1 Y 1 A PRO 23 ? A PRO 23 24 1 Y 1 A ASN 24 ? A ASN 24 25 1 Y 1 A SER 351 ? A SER 351 26 1 Y 1 A GLU 352 ? A GLU 352 27 1 Y 1 A LYS 353 ? A LYS 353 28 1 Y 1 A HIS 354 ? A HIS 354 29 1 Y 1 A LEU 372 ? A LEU 372 30 1 Y 1 A GLY 373 ? A GLY 373 31 1 Y 1 A THR 374 ? A THR 374 32 1 Y 1 A GLY 375 ? A GLY 375 33 1 Y 1 A ASN 376 ? A ASN 376 34 1 Y 1 A TYR 377 ? A TYR 377 35 1 Y 1 A LYS 398 ? A LYS 398 36 1 Y 1 A MET 399 ? A MET 399 37 1 Y 1 A PRO 400 ? A PRO 400 38 1 Y 1 A PHE 401 ? A PHE 401 39 1 Y 1 A HIS 402 ? A HIS 402 40 1 Y 1 A ALA 415 ? A ALA 415 41 1 Y 1 A LEU 416 ? A LEU 416 42 1 Y 1 A ASN 417 ? A ASN 417 43 1 Y 1 A THR 418 ? A THR 418 44 1 Y 1 A ALA 419 ? A ALA 419 45 1 Y 1 A LYS 420 ? A LYS 420 46 1 Y 1 B DT -4 ? B DT 1 47 1 Y 1 B DC -3 ? B DC 2 48 1 Y 1 B DT -2 ? B DT 3 49 1 Y 1 B 2EG -1 ? B 2EG 4 50 1 Y 1 B DG 0 ? B DG 5 51 1 Y 1 B DG 1 ? B DG 6 52 1 Y 1 B DG 2 ? B DG 7 53 1 Y 1 B DT 3 ? B DT 8 54 1 Y 1 B DC 4 ? B DC 9 55 1 Y 1 B DC 5 ? B DC 10 56 1 Y 1 B DT 6 ? B DT 11 57 1 Y 1 C DT 837 ? C DT 1 58 1 Y 1 C DC 838 ? C DC 2 59 1 Y 1 C DT 839 ? C DT 3 60 1 Y 1 C DA 848 ? C DA 12 61 1 Y 1 C DG 849 ? C DG 13 62 1 Y 1 C DG 850 ? C DG 14 63 1 Y 1 C DA 851 ? C DA 15 64 1 Y 1 C DC 852 ? C DC 16 65 1 Y 1 C DC 853 ? C DC 17 66 1 Y 1 C DOC 854 ? C DOC 18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2EG OP3 O N N 1 2EG OP1 O N N 2 2EG P P N N 3 2EG OP2 O N N 4 2EG "O5'" O N N 5 2EG "C5'" C N N 6 2EG "C4'" C N R 7 2EG "O4'" O N N 8 2EG "C3'" C N S 9 2EG "O3'" O N N 10 2EG "C2'" C N N 11 2EG "C1'" C N R 12 2EG N9 N Y N 13 2EG C4 C Y N 14 2EG N3 N N N 15 2EG C8 C Y N 16 2EG N7 N Y N 17 2EG C5 C Y N 18 2EG C6 C N N 19 2EG O6 O N N 20 2EG N1 N N N 21 2EG C2 C N N 22 2EG N2 N N N 23 2EG C21 C N N 24 2EG C22 C N N 25 2EG "H5'" H N N 26 2EG "H5''" H N N 27 2EG "H4'" H N N 28 2EG "H3'" H N N 29 2EG "H2'" H N N 30 2EG "H2''" H N N 31 2EG "H1'" H N N 32 2EG H8 H N N 33 2EG H1 H N N 34 2EG H21 H N N 35 2EG H211 H N N 36 2EG H212 H N N 37 2EG H221 H N N 38 2EG H222 H N N 39 2EG H223 H N N 40 2EG HO1 H N N 41 2EG HO2 H N N 42 2EG HO3 H N N 43 ALA N N N N 44 ALA CA C N S 45 ALA C C N N 46 ALA O O N N 47 ALA CB C N N 48 ALA OXT O N N 49 ALA H H N N 50 ALA H2 H N N 51 ALA HA H N N 52 ALA HB1 H N N 53 ALA HB2 H N N 54 ALA HB3 H N N 55 ALA HXT H N N 56 ARG N N N N 57 ARG CA C N S 58 ARG C C N N 59 ARG O O N N 60 ARG CB C N N 61 ARG CG C N N 62 ARG CD C N N 63 ARG NE N N N 64 ARG CZ C N N 65 ARG NH1 N N N 66 ARG NH2 N N N 67 ARG OXT O N N 68 ARG H H N N 69 ARG H2 H N N 70 ARG HA H N N 71 ARG HB2 H N N 72 ARG HB3 H N N 73 ARG HG2 H N N 74 ARG HG3 H N N 75 ARG HD2 H N N 76 ARG HD3 H N N 77 ARG HE H N N 78 ARG HH11 H N N 79 ARG HH12 H N N 80 ARG HH21 H N N 81 ARG HH22 H N N 82 ARG HXT H N N 83 ASN N N N N 84 ASN CA C N S 85 ASN C C N N 86 ASN O O N N 87 ASN CB C N N 88 ASN CG C N N 89 ASN OD1 O N N 90 ASN ND2 N N N 91 ASN OXT O N N 92 ASN H H N N 93 ASN H2 H N N 94 ASN HA H N N 95 ASN HB2 H N N 96 ASN HB3 H N N 97 ASN HD21 H N N 98 ASN HD22 H N N 99 ASN HXT H N N 100 ASP N N N N 101 ASP CA C N S 102 ASP C C N N 103 ASP O O N N 104 ASP CB C N N 105 ASP CG C N N 106 ASP OD1 O N N 107 ASP OD2 O N N 108 ASP OXT O N N 109 ASP H H N N 110 ASP H2 H N N 111 ASP HA H N N 112 ASP HB2 H N N 113 ASP HB3 H N N 114 ASP HD2 H N N 115 ASP HXT H N N 116 CYS N N N N 117 CYS CA C N R 118 CYS C C N N 119 CYS O O N N 120 CYS CB C N N 121 CYS SG S N N 122 CYS OXT O N N 123 CYS H H N N 124 CYS H2 H N N 125 CYS HA H N N 126 CYS HB2 H N N 127 CYS HB3 H N N 128 CYS HG H N N 129 CYS HXT H N N 130 DA OP3 O N N 131 DA P P N N 132 DA OP1 O N N 133 DA OP2 O N N 134 DA "O5'" O N N 135 DA "C5'" C N N 136 DA "C4'" C N R 137 DA "O4'" O N N 138 DA "C3'" C N S 139 DA "O3'" O N N 140 DA "C2'" C N N 141 DA "C1'" C N R 142 DA N9 N Y N 143 DA C8 C Y N 144 DA N7 N Y N 145 DA C5 C Y N 146 DA C6 C Y N 147 DA N6 N N N 148 DA N1 N Y N 149 DA C2 C Y N 150 DA N3 N Y N 151 DA C4 C Y N 152 DA HOP3 H N N 153 DA HOP2 H N N 154 DA "H5'" H N N 155 DA "H5''" H N N 156 DA "H4'" H N N 157 DA "H3'" H N N 158 DA "HO3'" H N N 159 DA "H2'" H N N 160 DA "H2''" H N N 161 DA "H1'" H N N 162 DA H8 H N N 163 DA H61 H N N 164 DA H62 H N N 165 DA H2 H N N 166 DC OP3 O N N 167 DC P P N N 168 DC OP1 O N N 169 DC OP2 O N N 170 DC "O5'" O N N 171 DC "C5'" C N N 172 DC "C4'" C N R 173 DC "O4'" O N N 174 DC "C3'" C N S 175 DC "O3'" O N N 176 DC "C2'" C N N 177 DC "C1'" C N R 178 DC N1 N N N 179 DC C2 C N N 180 DC O2 O N N 181 DC N3 N N N 182 DC C4 C N N 183 DC N4 N N N 184 DC C5 C N N 185 DC C6 C N N 186 DC HOP3 H N N 187 DC HOP2 H N N 188 DC "H5'" H N N 189 DC "H5''" H N N 190 DC "H4'" H N N 191 DC "H3'" H N N 192 DC "HO3'" H N N 193 DC "H2'" H N N 194 DC "H2''" H N N 195 DC "H1'" H N N 196 DC H41 H N N 197 DC H42 H N N 198 DC H5 H N N 199 DC H6 H N N 200 DCP N1 N N N 201 DCP C2 C N N 202 DCP N3 N N N 203 DCP C4 C N N 204 DCP C5 C N N 205 DCP C6 C N N 206 DCP O2 O N N 207 DCP N4 N N N 208 DCP "C1'" C N R 209 DCP "C2'" C N N 210 DCP "C3'" C N S 211 DCP "C4'" C N R 212 DCP "O4'" O N N 213 DCP "O3'" O N N 214 DCP "C5'" C N N 215 DCP "O5'" O N N 216 DCP PA P N R 217 DCP O1A O N N 218 DCP O2A O N N 219 DCP O3A O N N 220 DCP PB P N S 221 DCP O1B O N N 222 DCP O2B O N N 223 DCP O3B O N N 224 DCP PG P N N 225 DCP O1G O N N 226 DCP O2G O N N 227 DCP O3G O N N 228 DCP H5 H N N 229 DCP H6 H N N 230 DCP HN41 H N N 231 DCP HN42 H N N 232 DCP "H1'" H N N 233 DCP "H2'1" H N N 234 DCP "H2'2" H N N 235 DCP "H3'" H N N 236 DCP "H4'" H N N 237 DCP "HO3'" H N N 238 DCP "H5'1" H N N 239 DCP "H5'2" H N N 240 DCP HOA2 H N N 241 DCP HOB2 H N N 242 DCP HOG2 H N N 243 DCP HOG3 H N N 244 DG OP3 O N N 245 DG P P N N 246 DG OP1 O N N 247 DG OP2 O N N 248 DG "O5'" O N N 249 DG "C5'" C N N 250 DG "C4'" C N R 251 DG "O4'" O N N 252 DG "C3'" C N S 253 DG "O3'" O N N 254 DG "C2'" C N N 255 DG "C1'" C N R 256 DG N9 N Y N 257 DG C8 C Y N 258 DG N7 N Y N 259 DG C5 C Y N 260 DG C6 C N N 261 DG O6 O N N 262 DG N1 N N N 263 DG C2 C N N 264 DG N2 N N N 265 DG N3 N N N 266 DG C4 C Y N 267 DG HOP3 H N N 268 DG HOP2 H N N 269 DG "H5'" H N N 270 DG "H5''" H N N 271 DG "H4'" H N N 272 DG "H3'" H N N 273 DG "HO3'" H N N 274 DG "H2'" H N N 275 DG "H2''" H N N 276 DG "H1'" H N N 277 DG H8 H N N 278 DG H1 H N N 279 DG H21 H N N 280 DG H22 H N N 281 DOC N1 N N N 282 DOC C2 C N N 283 DOC N3 N N N 284 DOC C4 C N N 285 DOC C5 C N N 286 DOC C6 C N N 287 DOC O2 O N N 288 DOC N4 N N N 289 DOC "C1'" C N R 290 DOC "C2'" C N N 291 DOC "C3'" C N N 292 DOC "C4'" C N S 293 DOC "O4'" O N N 294 DOC "C5'" C N N 295 DOC "O5'" O N N 296 DOC P P N N 297 DOC OP1 O N N 298 DOC OP2 O N N 299 DOC OP3 O N N 300 DOC H5 H N N 301 DOC H6 H N N 302 DOC HN41 H N N 303 DOC HN42 H N N 304 DOC "H1'" H N N 305 DOC "H2'" H N N 306 DOC "H2''" H N N 307 DOC "H3'1" H N N 308 DOC "H3'2" H N N 309 DOC "H4'" H N N 310 DOC "H5'" H N N 311 DOC "H5''" H N N 312 DOC HOP2 H N N 313 DOC HOP3 H N N 314 DT OP3 O N N 315 DT P P N N 316 DT OP1 O N N 317 DT OP2 O N N 318 DT "O5'" O N N 319 DT "C5'" C N N 320 DT "C4'" C N R 321 DT "O4'" O N N 322 DT "C3'" C N S 323 DT "O3'" O N N 324 DT "C2'" C N N 325 DT "C1'" C N R 326 DT N1 N N N 327 DT C2 C N N 328 DT O2 O N N 329 DT N3 N N N 330 DT C4 C N N 331 DT O4 O N N 332 DT C5 C N N 333 DT C7 C N N 334 DT C6 C N N 335 DT HOP3 H N N 336 DT HOP2 H N N 337 DT "H5'" H N N 338 DT "H5''" H N N 339 DT "H4'" H N N 340 DT "H3'" H N N 341 DT "HO3'" H N N 342 DT "H2'" H N N 343 DT "H2''" H N N 344 DT "H1'" H N N 345 DT H3 H N N 346 DT H71 H N N 347 DT H72 H N N 348 DT H73 H N N 349 DT H6 H N N 350 GLN N N N N 351 GLN CA C N S 352 GLN C C N N 353 GLN O O N N 354 GLN CB C N N 355 GLN CG C N N 356 GLN CD C N N 357 GLN OE1 O N N 358 GLN NE2 N N N 359 GLN OXT O N N 360 GLN H H N N 361 GLN H2 H N N 362 GLN HA H N N 363 GLN HB2 H N N 364 GLN HB3 H N N 365 GLN HG2 H N N 366 GLN HG3 H N N 367 GLN HE21 H N N 368 GLN HE22 H N N 369 GLN HXT H N N 370 GLU N N N N 371 GLU CA C N S 372 GLU C C N N 373 GLU O O N N 374 GLU CB C N N 375 GLU CG C N N 376 GLU CD C N N 377 GLU OE1 O N N 378 GLU OE2 O N N 379 GLU OXT O N N 380 GLU H H N N 381 GLU H2 H N N 382 GLU HA H N N 383 GLU HB2 H N N 384 GLU HB3 H N N 385 GLU HG2 H N N 386 GLU HG3 H N N 387 GLU HE2 H N N 388 GLU HXT H N N 389 GLY N N N N 390 GLY CA C N N 391 GLY C C N N 392 GLY O O N N 393 GLY OXT O N N 394 GLY H H N N 395 GLY H2 H N N 396 GLY HA2 H N N 397 GLY HA3 H N N 398 GLY HXT H N N 399 HIS N N N N 400 HIS CA C N S 401 HIS C C N N 402 HIS O O N N 403 HIS CB C N N 404 HIS CG C Y N 405 HIS ND1 N Y N 406 HIS CD2 C Y N 407 HIS CE1 C Y N 408 HIS NE2 N Y N 409 HIS OXT O N N 410 HIS H H N N 411 HIS H2 H N N 412 HIS HA H N N 413 HIS HB2 H N N 414 HIS HB3 H N N 415 HIS HD1 H N N 416 HIS HD2 H N N 417 HIS HE1 H N N 418 HIS HE2 H N N 419 HIS HXT H N N 420 HOH O O N N 421 HOH H1 H N N 422 HOH H2 H N N 423 ILE N N N N 424 ILE CA C N S 425 ILE C C N N 426 ILE O O N N 427 ILE CB C N S 428 ILE CG1 C N N 429 ILE CG2 C N N 430 ILE CD1 C N N 431 ILE OXT O N N 432 ILE H H N N 433 ILE H2 H N N 434 ILE HA H N N 435 ILE HB H N N 436 ILE HG12 H N N 437 ILE HG13 H N N 438 ILE HG21 H N N 439 ILE HG22 H N N 440 ILE HG23 H N N 441 ILE HD11 H N N 442 ILE HD12 H N N 443 ILE HD13 H N N 444 ILE HXT H N N 445 LEU N N N N 446 LEU CA C N S 447 LEU C C N N 448 LEU O O N N 449 LEU CB C N N 450 LEU CG C N N 451 LEU CD1 C N N 452 LEU CD2 C N N 453 LEU OXT O N N 454 LEU H H N N 455 LEU H2 H N N 456 LEU HA H N N 457 LEU HB2 H N N 458 LEU HB3 H N N 459 LEU HG H N N 460 LEU HD11 H N N 461 LEU HD12 H N N 462 LEU HD13 H N N 463 LEU HD21 H N N 464 LEU HD22 H N N 465 LEU HD23 H N N 466 LEU HXT H N N 467 LYS N N N N 468 LYS CA C N S 469 LYS C C N N 470 LYS O O N N 471 LYS CB C N N 472 LYS CG C N N 473 LYS CD C N N 474 LYS CE C N N 475 LYS NZ N N N 476 LYS OXT O N N 477 LYS H H N N 478 LYS H2 H N N 479 LYS HA H N N 480 LYS HB2 H N N 481 LYS HB3 H N N 482 LYS HG2 H N N 483 LYS HG3 H N N 484 LYS HD2 H N N 485 LYS HD3 H N N 486 LYS HE2 H N N 487 LYS HE3 H N N 488 LYS HZ1 H N N 489 LYS HZ2 H N N 490 LYS HZ3 H N N 491 LYS HXT H N N 492 MET N N N N 493 MET CA C N S 494 MET C C N N 495 MET O O N N 496 MET CB C N N 497 MET CG C N N 498 MET SD S N N 499 MET CE C N N 500 MET OXT O N N 501 MET H H N N 502 MET H2 H N N 503 MET HA H N N 504 MET HB2 H N N 505 MET HB3 H N N 506 MET HG2 H N N 507 MET HG3 H N N 508 MET HE1 H N N 509 MET HE2 H N N 510 MET HE3 H N N 511 MET HXT H N N 512 NA NA NA N N 513 PHE N N N N 514 PHE CA C N S 515 PHE C C N N 516 PHE O O N N 517 PHE CB C N N 518 PHE CG C Y N 519 PHE CD1 C Y N 520 PHE CD2 C Y N 521 PHE CE1 C Y N 522 PHE CE2 C Y N 523 PHE CZ C Y N 524 PHE OXT O N N 525 PHE H H N N 526 PHE H2 H N N 527 PHE HA H N N 528 PHE HB2 H N N 529 PHE HB3 H N N 530 PHE HD1 H N N 531 PHE HD2 H N N 532 PHE HE1 H N N 533 PHE HE2 H N N 534 PHE HZ H N N 535 PHE HXT H N N 536 PRO N N N N 537 PRO CA C N S 538 PRO C C N N 539 PRO O O N N 540 PRO CB C N N 541 PRO CG C N N 542 PRO CD C N N 543 PRO OXT O N N 544 PRO H H N N 545 PRO HA H N N 546 PRO HB2 H N N 547 PRO HB3 H N N 548 PRO HG2 H N N 549 PRO HG3 H N N 550 PRO HD2 H N N 551 PRO HD3 H N N 552 PRO HXT H N N 553 SER N N N N 554 SER CA C N S 555 SER C C N N 556 SER O O N N 557 SER CB C N N 558 SER OG O N N 559 SER OXT O N N 560 SER H H N N 561 SER H2 H N N 562 SER HA H N N 563 SER HB2 H N N 564 SER HB3 H N N 565 SER HG H N N 566 SER HXT H N N 567 THR N N N N 568 THR CA C N S 569 THR C C N N 570 THR O O N N 571 THR CB C N R 572 THR OG1 O N N 573 THR CG2 C N N 574 THR OXT O N N 575 THR H H N N 576 THR H2 H N N 577 THR HA H N N 578 THR HB H N N 579 THR HG1 H N N 580 THR HG21 H N N 581 THR HG22 H N N 582 THR HG23 H N N 583 THR HXT H N N 584 TYR N N N N 585 TYR CA C N S 586 TYR C C N N 587 TYR O O N N 588 TYR CB C N N 589 TYR CG C Y N 590 TYR CD1 C Y N 591 TYR CD2 C Y N 592 TYR CE1 C Y N 593 TYR CE2 C Y N 594 TYR CZ C Y N 595 TYR OH O N N 596 TYR OXT O N N 597 TYR H H N N 598 TYR H2 H N N 599 TYR HA H N N 600 TYR HB2 H N N 601 TYR HB3 H N N 602 TYR HD1 H N N 603 TYR HD2 H N N 604 TYR HE1 H N N 605 TYR HE2 H N N 606 TYR HH H N N 607 TYR HXT H N N 608 VAL N N N N 609 VAL CA C N S 610 VAL C C N N 611 VAL O O N N 612 VAL CB C N N 613 VAL CG1 C N N 614 VAL CG2 C N N 615 VAL OXT O N N 616 VAL H H N N 617 VAL H2 H N N 618 VAL HA H N N 619 VAL HB H N N 620 VAL HG11 H N N 621 VAL HG12 H N N 622 VAL HG13 H N N 623 VAL HG21 H N N 624 VAL HG22 H N N 625 VAL HG23 H N N 626 VAL HXT H N N 627 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2EG OP3 P doub N N 1 2EG OP1 P sing N N 2 2EG P OP2 sing N N 3 2EG P "O5'" sing N N 4 2EG "O5'" "C5'" sing N N 5 2EG "C5'" "C4'" sing N N 6 2EG "C5'" "H5'" sing N N 7 2EG "C5'" "H5''" sing N N 8 2EG "C4'" "O4'" sing N N 9 2EG "C4'" "C3'" sing N N 10 2EG "C4'" "H4'" sing N N 11 2EG "O4'" "C1'" sing N N 12 2EG "C3'" "O3'" sing N N 13 2EG "C3'" "C2'" sing N N 14 2EG "C3'" "H3'" sing N N 15 2EG "C2'" "C1'" sing N N 16 2EG "C2'" "H2'" sing N N 17 2EG "C2'" "H2''" sing N N 18 2EG "C1'" N9 sing N N 19 2EG "C1'" "H1'" sing N N 20 2EG N9 C4 sing Y N 21 2EG N9 C8 sing Y N 22 2EG C4 N3 sing N N 23 2EG C4 C5 doub Y N 24 2EG N3 C2 doub N N 25 2EG C8 N7 doub Y N 26 2EG C8 H8 sing N N 27 2EG N7 C5 sing Y N 28 2EG C5 C6 sing N N 29 2EG C6 O6 doub N N 30 2EG C6 N1 sing N N 31 2EG N1 C2 sing N N 32 2EG N1 H1 sing N N 33 2EG C2 N2 sing N N 34 2EG N2 C21 sing N N 35 2EG N2 H21 sing N N 36 2EG C21 C22 sing N N 37 2EG C21 H211 sing N N 38 2EG C21 H212 sing N N 39 2EG C22 H221 sing N N 40 2EG C22 H222 sing N N 41 2EG C22 H223 sing N N 42 2EG HO1 "O3'" sing N N 43 2EG HO2 OP2 sing N N 44 2EG HO3 OP1 sing N N 45 ALA N CA sing N N 46 ALA N H sing N N 47 ALA N H2 sing N N 48 ALA CA C sing N N 49 ALA CA CB sing N N 50 ALA CA HA sing N N 51 ALA C O doub N N 52 ALA C OXT sing N N 53 ALA CB HB1 sing N N 54 ALA CB HB2 sing N N 55 ALA CB HB3 sing N N 56 ALA OXT HXT sing N N 57 ARG N CA sing N N 58 ARG N H sing N N 59 ARG N H2 sing N N 60 ARG CA C sing N N 61 ARG CA CB sing N N 62 ARG CA HA sing N N 63 ARG C O doub N N 64 ARG C OXT sing N N 65 ARG CB CG sing N N 66 ARG CB HB2 sing N N 67 ARG CB HB3 sing N N 68 ARG CG CD sing N N 69 ARG CG HG2 sing N N 70 ARG CG HG3 sing N N 71 ARG CD NE sing N N 72 ARG CD HD2 sing N N 73 ARG CD HD3 sing N N 74 ARG NE CZ sing N N 75 ARG NE HE sing N N 76 ARG CZ NH1 sing N N 77 ARG CZ NH2 doub N N 78 ARG NH1 HH11 sing N N 79 ARG NH1 HH12 sing N N 80 ARG NH2 HH21 sing N N 81 ARG NH2 HH22 sing N N 82 ARG OXT HXT sing N N 83 ASN N CA sing N N 84 ASN N H sing N N 85 ASN N H2 sing N N 86 ASN CA C sing N N 87 ASN CA CB sing N N 88 ASN CA HA sing N N 89 ASN C O doub N N 90 ASN C OXT sing N N 91 ASN CB CG sing N N 92 ASN CB HB2 sing N N 93 ASN CB HB3 sing N N 94 ASN CG OD1 doub N N 95 ASN CG ND2 sing N N 96 ASN ND2 HD21 sing N N 97 ASN ND2 HD22 sing N N 98 ASN OXT HXT sing N N 99 ASP N CA sing N N 100 ASP N H sing N N 101 ASP N H2 sing N N 102 ASP CA C sing N N 103 ASP CA CB sing N N 104 ASP CA HA sing N N 105 ASP C O doub N N 106 ASP C OXT sing N N 107 ASP CB CG sing N N 108 ASP CB HB2 sing N N 109 ASP CB HB3 sing N N 110 ASP CG OD1 doub N N 111 ASP CG OD2 sing N N 112 ASP OD2 HD2 sing N N 113 ASP OXT HXT sing N N 114 CYS N CA sing N N 115 CYS N H sing N N 116 CYS N H2 sing N N 117 CYS CA C sing N N 118 CYS CA CB sing N N 119 CYS CA HA sing N N 120 CYS C O doub N N 121 CYS C OXT sing N N 122 CYS CB SG sing N N 123 CYS CB HB2 sing N N 124 CYS CB HB3 sing N N 125 CYS SG HG sing N N 126 CYS OXT HXT sing N N 127 DA OP3 P sing N N 128 DA OP3 HOP3 sing N N 129 DA P OP1 doub N N 130 DA P OP2 sing N N 131 DA P "O5'" sing N N 132 DA OP2 HOP2 sing N N 133 DA "O5'" "C5'" sing N N 134 DA "C5'" "C4'" sing N N 135 DA "C5'" "H5'" sing N N 136 DA "C5'" "H5''" sing N N 137 DA "C4'" "O4'" sing N N 138 DA "C4'" "C3'" sing N N 139 DA "C4'" "H4'" sing N N 140 DA "O4'" "C1'" sing N N 141 DA "C3'" "O3'" sing N N 142 DA "C3'" "C2'" sing N N 143 DA "C3'" "H3'" sing N N 144 DA "O3'" "HO3'" sing N N 145 DA "C2'" "C1'" sing N N 146 DA "C2'" "H2'" sing N N 147 DA "C2'" "H2''" sing N N 148 DA "C1'" N9 sing N N 149 DA "C1'" "H1'" sing N N 150 DA N9 C8 sing Y N 151 DA N9 C4 sing Y N 152 DA C8 N7 doub Y N 153 DA C8 H8 sing N N 154 DA N7 C5 sing Y N 155 DA C5 C6 sing Y N 156 DA C5 C4 doub Y N 157 DA C6 N6 sing N N 158 DA C6 N1 doub Y N 159 DA N6 H61 sing N N 160 DA N6 H62 sing N N 161 DA N1 C2 sing Y N 162 DA C2 N3 doub Y N 163 DA C2 H2 sing N N 164 DA N3 C4 sing Y N 165 DC OP3 P sing N N 166 DC OP3 HOP3 sing N N 167 DC P OP1 doub N N 168 DC P OP2 sing N N 169 DC P "O5'" sing N N 170 DC OP2 HOP2 sing N N 171 DC "O5'" "C5'" sing N N 172 DC "C5'" "C4'" sing N N 173 DC "C5'" "H5'" sing N N 174 DC "C5'" "H5''" sing N N 175 DC "C4'" "O4'" sing N N 176 DC "C4'" "C3'" sing N N 177 DC "C4'" "H4'" sing N N 178 DC "O4'" "C1'" sing N N 179 DC "C3'" "O3'" sing N N 180 DC "C3'" "C2'" sing N N 181 DC "C3'" "H3'" sing N N 182 DC "O3'" "HO3'" sing N N 183 DC "C2'" "C1'" sing N N 184 DC "C2'" "H2'" sing N N 185 DC "C2'" "H2''" sing N N 186 DC "C1'" N1 sing N N 187 DC "C1'" "H1'" sing N N 188 DC N1 C2 sing N N 189 DC N1 C6 sing N N 190 DC C2 O2 doub N N 191 DC C2 N3 sing N N 192 DC N3 C4 doub N N 193 DC C4 N4 sing N N 194 DC C4 C5 sing N N 195 DC N4 H41 sing N N 196 DC N4 H42 sing N N 197 DC C5 C6 doub N N 198 DC C5 H5 sing N N 199 DC C6 H6 sing N N 200 DCP N1 C2 sing N N 201 DCP N1 C6 sing N N 202 DCP N1 "C1'" sing N N 203 DCP C2 N3 sing N N 204 DCP C2 O2 doub N N 205 DCP N3 C4 doub N N 206 DCP C4 C5 sing N N 207 DCP C4 N4 sing N N 208 DCP C5 C6 doub N N 209 DCP C5 H5 sing N N 210 DCP C6 H6 sing N N 211 DCP N4 HN41 sing N N 212 DCP N4 HN42 sing N N 213 DCP "C1'" "C2'" sing N N 214 DCP "C1'" "O4'" sing N N 215 DCP "C1'" "H1'" sing N N 216 DCP "C2'" "C3'" sing N N 217 DCP "C2'" "H2'1" sing N N 218 DCP "C2'" "H2'2" sing N N 219 DCP "C3'" "C4'" sing N N 220 DCP "C3'" "O3'" sing N N 221 DCP "C3'" "H3'" sing N N 222 DCP "C4'" "O4'" sing N N 223 DCP "C4'" "C5'" sing N N 224 DCP "C4'" "H4'" sing N N 225 DCP "O3'" "HO3'" sing N N 226 DCP "C5'" "O5'" sing N N 227 DCP "C5'" "H5'1" sing N N 228 DCP "C5'" "H5'2" sing N N 229 DCP "O5'" PA sing N N 230 DCP PA O1A doub N N 231 DCP PA O2A sing N N 232 DCP PA O3A sing N N 233 DCP O2A HOA2 sing N N 234 DCP O3A PB sing N N 235 DCP PB O1B doub N N 236 DCP PB O2B sing N N 237 DCP PB O3B sing N N 238 DCP O2B HOB2 sing N N 239 DCP O3B PG sing N N 240 DCP PG O1G doub N N 241 DCP PG O2G sing N N 242 DCP PG O3G sing N N 243 DCP O2G HOG2 sing N N 244 DCP O3G HOG3 sing N N 245 DG OP3 P sing N N 246 DG OP3 HOP3 sing N N 247 DG P OP1 doub N N 248 DG P OP2 sing N N 249 DG P "O5'" sing N N 250 DG OP2 HOP2 sing N N 251 DG "O5'" "C5'" sing N N 252 DG "C5'" "C4'" sing N N 253 DG "C5'" "H5'" sing N N 254 DG "C5'" "H5''" sing N N 255 DG "C4'" "O4'" sing N N 256 DG "C4'" "C3'" sing N N 257 DG "C4'" "H4'" sing N N 258 DG "O4'" "C1'" sing N N 259 DG "C3'" "O3'" sing N N 260 DG "C3'" "C2'" sing N N 261 DG "C3'" "H3'" sing N N 262 DG "O3'" "HO3'" sing N N 263 DG "C2'" "C1'" sing N N 264 DG "C2'" "H2'" sing N N 265 DG "C2'" "H2''" sing N N 266 DG "C1'" N9 sing N N 267 DG "C1'" "H1'" sing N N 268 DG N9 C8 sing Y N 269 DG N9 C4 sing Y N 270 DG C8 N7 doub Y N 271 DG C8 H8 sing N N 272 DG N7 C5 sing Y N 273 DG C5 C6 sing N N 274 DG C5 C4 doub Y N 275 DG C6 O6 doub N N 276 DG C6 N1 sing N N 277 DG N1 C2 sing N N 278 DG N1 H1 sing N N 279 DG C2 N2 sing N N 280 DG C2 N3 doub N N 281 DG N2 H21 sing N N 282 DG N2 H22 sing N N 283 DG N3 C4 sing N N 284 DOC N1 C2 sing N N 285 DOC N1 C6 sing N N 286 DOC N1 "C1'" sing N N 287 DOC C2 N3 sing N N 288 DOC C2 O2 doub N N 289 DOC N3 C4 doub N N 290 DOC C4 C5 sing N N 291 DOC C4 N4 sing N N 292 DOC C5 C6 doub N N 293 DOC C5 H5 sing N N 294 DOC C6 H6 sing N N 295 DOC N4 HN41 sing N N 296 DOC N4 HN42 sing N N 297 DOC "C1'" "C2'" sing N N 298 DOC "C1'" "O4'" sing N N 299 DOC "C1'" "H1'" sing N N 300 DOC "C2'" "C3'" sing N N 301 DOC "C2'" "H2'" sing N N 302 DOC "C2'" "H2''" sing N N 303 DOC "C3'" "C4'" sing N N 304 DOC "C3'" "H3'1" sing N N 305 DOC "C3'" "H3'2" sing N N 306 DOC "C4'" "O4'" sing N N 307 DOC "C4'" "C5'" sing N N 308 DOC "C4'" "H4'" sing N N 309 DOC "C5'" "O5'" sing N N 310 DOC "C5'" "H5'" sing N N 311 DOC "C5'" "H5''" sing N N 312 DOC "O5'" P sing N N 313 DOC P OP1 doub N N 314 DOC P OP2 sing N N 315 DOC P OP3 sing N N 316 DOC OP2 HOP2 sing N N 317 DOC OP3 HOP3 sing N N 318 DT OP3 P sing N N 319 DT OP3 HOP3 sing N N 320 DT P OP1 doub N N 321 DT P OP2 sing N N 322 DT P "O5'" sing N N 323 DT OP2 HOP2 sing N N 324 DT "O5'" "C5'" sing N N 325 DT "C5'" "C4'" sing N N 326 DT "C5'" "H5'" sing N N 327 DT "C5'" "H5''" sing N N 328 DT "C4'" "O4'" sing N N 329 DT "C4'" "C3'" sing N N 330 DT "C4'" "H4'" sing N N 331 DT "O4'" "C1'" sing N N 332 DT "C3'" "O3'" sing N N 333 DT "C3'" "C2'" sing N N 334 DT "C3'" "H3'" sing N N 335 DT "O3'" "HO3'" sing N N 336 DT "C2'" "C1'" sing N N 337 DT "C2'" "H2'" sing N N 338 DT "C2'" "H2''" sing N N 339 DT "C1'" N1 sing N N 340 DT "C1'" "H1'" sing N N 341 DT N1 C2 sing N N 342 DT N1 C6 sing N N 343 DT C2 O2 doub N N 344 DT C2 N3 sing N N 345 DT N3 C4 sing N N 346 DT N3 H3 sing N N 347 DT C4 O4 doub N N 348 DT C4 C5 sing N N 349 DT C5 C7 sing N N 350 DT C5 C6 doub N N 351 DT C7 H71 sing N N 352 DT C7 H72 sing N N 353 DT C7 H73 sing N N 354 DT C6 H6 sing N N 355 GLN N CA sing N N 356 GLN N H sing N N 357 GLN N H2 sing N N 358 GLN CA C sing N N 359 GLN CA CB sing N N 360 GLN CA HA sing N N 361 GLN C O doub N N 362 GLN C OXT sing N N 363 GLN CB CG sing N N 364 GLN CB HB2 sing N N 365 GLN CB HB3 sing N N 366 GLN CG CD sing N N 367 GLN CG HG2 sing N N 368 GLN CG HG3 sing N N 369 GLN CD OE1 doub N N 370 GLN CD NE2 sing N N 371 GLN NE2 HE21 sing N N 372 GLN NE2 HE22 sing N N 373 GLN OXT HXT sing N N 374 GLU N CA sing N N 375 GLU N H sing N N 376 GLU N H2 sing N N 377 GLU CA C sing N N 378 GLU CA CB sing N N 379 GLU CA HA sing N N 380 GLU C O doub N N 381 GLU C OXT sing N N 382 GLU CB CG sing N N 383 GLU CB HB2 sing N N 384 GLU CB HB3 sing N N 385 GLU CG CD sing N N 386 GLU CG HG2 sing N N 387 GLU CG HG3 sing N N 388 GLU CD OE1 doub N N 389 GLU CD OE2 sing N N 390 GLU OE2 HE2 sing N N 391 GLU OXT HXT sing N N 392 GLY N CA sing N N 393 GLY N H sing N N 394 GLY N H2 sing N N 395 GLY CA C sing N N 396 GLY CA HA2 sing N N 397 GLY CA HA3 sing N N 398 GLY C O doub N N 399 GLY C OXT sing N N 400 GLY OXT HXT sing N N 401 HIS N CA sing N N 402 HIS N H sing N N 403 HIS N H2 sing N N 404 HIS CA C sing N N 405 HIS CA CB sing N N 406 HIS CA HA sing N N 407 HIS C O doub N N 408 HIS C OXT sing N N 409 HIS CB CG sing N N 410 HIS CB HB2 sing N N 411 HIS CB HB3 sing N N 412 HIS CG ND1 sing Y N 413 HIS CG CD2 doub Y N 414 HIS ND1 CE1 doub Y N 415 HIS ND1 HD1 sing N N 416 HIS CD2 NE2 sing Y N 417 HIS CD2 HD2 sing N N 418 HIS CE1 NE2 sing Y N 419 HIS CE1 HE1 sing N N 420 HIS NE2 HE2 sing N N 421 HIS OXT HXT sing N N 422 HOH O H1 sing N N 423 HOH O H2 sing N N 424 ILE N CA sing N N 425 ILE N H sing N N 426 ILE N H2 sing N N 427 ILE CA C sing N N 428 ILE CA CB sing N N 429 ILE CA HA sing N N 430 ILE C O doub N N 431 ILE C OXT sing N N 432 ILE CB CG1 sing N N 433 ILE CB CG2 sing N N 434 ILE CB HB sing N N 435 ILE CG1 CD1 sing N N 436 ILE CG1 HG12 sing N N 437 ILE CG1 HG13 sing N N 438 ILE CG2 HG21 sing N N 439 ILE CG2 HG22 sing N N 440 ILE CG2 HG23 sing N N 441 ILE CD1 HD11 sing N N 442 ILE CD1 HD12 sing N N 443 ILE CD1 HD13 sing N N 444 ILE OXT HXT sing N N 445 LEU N CA sing N N 446 LEU N H sing N N 447 LEU N H2 sing N N 448 LEU CA C sing N N 449 LEU CA CB sing N N 450 LEU CA HA sing N N 451 LEU C O doub N N 452 LEU C OXT sing N N 453 LEU CB CG sing N N 454 LEU CB HB2 sing N N 455 LEU CB HB3 sing N N 456 LEU CG CD1 sing N N 457 LEU CG CD2 sing N N 458 LEU CG HG sing N N 459 LEU CD1 HD11 sing N N 460 LEU CD1 HD12 sing N N 461 LEU CD1 HD13 sing N N 462 LEU CD2 HD21 sing N N 463 LEU CD2 HD22 sing N N 464 LEU CD2 HD23 sing N N 465 LEU OXT HXT sing N N 466 LYS N CA sing N N 467 LYS N H sing N N 468 LYS N H2 sing N N 469 LYS CA C sing N N 470 LYS CA CB sing N N 471 LYS CA HA sing N N 472 LYS C O doub N N 473 LYS C OXT sing N N 474 LYS CB CG sing N N 475 LYS CB HB2 sing N N 476 LYS CB HB3 sing N N 477 LYS CG CD sing N N 478 LYS CG HG2 sing N N 479 LYS CG HG3 sing N N 480 LYS CD CE sing N N 481 LYS CD HD2 sing N N 482 LYS CD HD3 sing N N 483 LYS CE NZ sing N N 484 LYS CE HE2 sing N N 485 LYS CE HE3 sing N N 486 LYS NZ HZ1 sing N N 487 LYS NZ HZ2 sing N N 488 LYS NZ HZ3 sing N N 489 LYS OXT HXT sing N N 490 MET N CA sing N N 491 MET N H sing N N 492 MET N H2 sing N N 493 MET CA C sing N N 494 MET CA CB sing N N 495 MET CA HA sing N N 496 MET C O doub N N 497 MET C OXT sing N N 498 MET CB CG sing N N 499 MET CB HB2 sing N N 500 MET CB HB3 sing N N 501 MET CG SD sing N N 502 MET CG HG2 sing N N 503 MET CG HG3 sing N N 504 MET SD CE sing N N 505 MET CE HE1 sing N N 506 MET CE HE2 sing N N 507 MET CE HE3 sing N N 508 MET OXT HXT sing N N 509 PHE N CA sing N N 510 PHE N H sing N N 511 PHE N H2 sing N N 512 PHE CA C sing N N 513 PHE CA CB sing N N 514 PHE CA HA sing N N 515 PHE C O doub N N 516 PHE C OXT sing N N 517 PHE CB CG sing N N 518 PHE CB HB2 sing N N 519 PHE CB HB3 sing N N 520 PHE CG CD1 doub Y N 521 PHE CG CD2 sing Y N 522 PHE CD1 CE1 sing Y N 523 PHE CD1 HD1 sing N N 524 PHE CD2 CE2 doub Y N 525 PHE CD2 HD2 sing N N 526 PHE CE1 CZ doub Y N 527 PHE CE1 HE1 sing N N 528 PHE CE2 CZ sing Y N 529 PHE CE2 HE2 sing N N 530 PHE CZ HZ sing N N 531 PHE OXT HXT sing N N 532 PRO N CA sing N N 533 PRO N CD sing N N 534 PRO N H sing N N 535 PRO CA C sing N N 536 PRO CA CB sing N N 537 PRO CA HA sing N N 538 PRO C O doub N N 539 PRO C OXT sing N N 540 PRO CB CG sing N N 541 PRO CB HB2 sing N N 542 PRO CB HB3 sing N N 543 PRO CG CD sing N N 544 PRO CG HG2 sing N N 545 PRO CG HG3 sing N N 546 PRO CD HD2 sing N N 547 PRO CD HD3 sing N N 548 PRO OXT HXT sing N N 549 SER N CA sing N N 550 SER N H sing N N 551 SER N H2 sing N N 552 SER CA C sing N N 553 SER CA CB sing N N 554 SER CA HA sing N N 555 SER C O doub N N 556 SER C OXT sing N N 557 SER CB OG sing N N 558 SER CB HB2 sing N N 559 SER CB HB3 sing N N 560 SER OG HG sing N N 561 SER OXT HXT sing N N 562 THR N CA sing N N 563 THR N H sing N N 564 THR N H2 sing N N 565 THR CA C sing N N 566 THR CA CB sing N N 567 THR CA HA sing N N 568 THR C O doub N N 569 THR C OXT sing N N 570 THR CB OG1 sing N N 571 THR CB CG2 sing N N 572 THR CB HB sing N N 573 THR OG1 HG1 sing N N 574 THR CG2 HG21 sing N N 575 THR CG2 HG22 sing N N 576 THR CG2 HG23 sing N N 577 THR OXT HXT sing N N 578 TYR N CA sing N N 579 TYR N H sing N N 580 TYR N H2 sing N N 581 TYR CA C sing N N 582 TYR CA CB sing N N 583 TYR CA HA sing N N 584 TYR C O doub N N 585 TYR C OXT sing N N 586 TYR CB CG sing N N 587 TYR CB HB2 sing N N 588 TYR CB HB3 sing N N 589 TYR CG CD1 doub Y N 590 TYR CG CD2 sing Y N 591 TYR CD1 CE1 sing Y N 592 TYR CD1 HD1 sing N N 593 TYR CD2 CE2 doub Y N 594 TYR CD2 HD2 sing N N 595 TYR CE1 CZ doub Y N 596 TYR CE1 HE1 sing N N 597 TYR CE2 CZ sing Y N 598 TYR CE2 HE2 sing N N 599 TYR CZ OH sing N N 600 TYR OH HH sing N N 601 TYR OXT HXT sing N N 602 VAL N CA sing N N 603 VAL N H sing N N 604 VAL N H2 sing N N 605 VAL CA C sing N N 606 VAL CA CB sing N N 607 VAL CA HA sing N N 608 VAL C O doub N N 609 VAL C OXT sing N N 610 VAL CB CG1 sing N N 611 VAL CB CG2 sing N N 612 VAL CB HB sing N N 613 VAL CG1 HG11 sing N N 614 VAL CG1 HG12 sing N N 615 VAL CG1 HG13 sing N N 616 VAL CG2 HG21 sing N N 617 VAL CG2 HG22 sing N N 618 VAL CG2 HG23 sing N N 619 VAL OXT HXT sing N N 620 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3EPG 'double helix' 3EPG 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 12 1_555 C DT 11 1_555 -0.098 -0.250 0.382 10.362 -6.887 6.780 1 B_DA7:DT847_C B 7 ? C 847 ? 20 1 1 B DG 13 1_555 C DC 10 1_555 -0.401 -0.079 -0.108 6.868 -0.383 2.816 2 B_DG8:DC846_C B 8 ? C 846 ? 19 1 1 B DG 14 1_555 C DC 9 1_555 0.382 0.018 -0.198 -1.392 -7.100 2.024 3 B_DG9:DC845_C B 9 ? C 845 ? 19 1 1 B DA 15 1_555 C DT 8 1_555 0.315 -0.190 0.366 10.428 -10.273 -4.429 4 B_DA10:DT844_C B 10 ? C 844 ? 20 1 1 B DC 16 1_555 C DG 7 1_555 0.086 -0.208 -0.062 15.289 -17.413 -2.150 5 B_DC11:DG843_C B 11 ? C 843 ? 19 1 1 B DC 17 1_555 C DG 6 1_555 0.217 -0.078 0.083 5.517 -7.346 -1.306 6 B_DC12:DG842_C B 12 ? C 842 ? 19 1 1 B DOC 18 1_555 C DG 5 1_555 -0.076 -0.167 -0.250 -2.518 -2.099 2.125 7 B_DOC13:DG841_C B 13 ? C 841 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 12 1_555 C DT 11 1_555 B DG 13 1_555 C DC 10 1_555 0.344 -0.525 3.480 1.943 -2.481 29.617 -0.466 -0.233 3.526 -4.835 -3.788 29.780 1 BB_DA7DG8:DC846DT847_CC B 7 ? C 847 ? B 8 ? C 846 ? 1 B DG 13 1_555 C DC 10 1_555 B DG 14 1_555 C DC 9 1_555 0.290 -0.777 3.575 1.645 2.472 37.980 -1.532 -0.218 3.529 3.791 -2.522 38.091 2 BB_DG8DG9:DC845DC846_CC B 8 ? C 846 ? B 9 ? C 845 ? 1 B DG 14 1_555 C DC 9 1_555 B DA 15 1_555 C DT 8 1_555 -0.552 -0.655 3.088 -5.233 0.615 32.622 -1.251 0.124 3.124 1.086 9.241 33.034 3 BB_DG9DA10:DT844DC845_CC B 9 ? C 845 ? B 10 ? C 844 ? 1 B DA 15 1_555 C DT 8 1_555 B DC 16 1_555 C DG 7 1_555 0.717 -1.458 3.122 3.078 0.611 30.980 -2.828 -0.772 3.148 1.141 -5.743 31.135 4 BB_DA10DC11:DG843DT844_CC B 10 ? C 844 ? B 11 ? C 843 ? 1 B DC 16 1_555 C DG 7 1_555 B DC 17 1_555 C DG 6 1_555 -0.124 -1.956 3.564 -2.577 9.070 32.526 -4.845 -0.208 2.929 15.785 4.484 33.829 5 BB_DC11DC12:DG842DG843_CC B 11 ? C 843 ? B 12 ? C 842 ? 1 B DC 17 1_555 C DG 6 1_555 B DOC 18 1_555 C DG 5 1_555 -0.611 -1.395 3.513 4.563 5.072 23.516 -4.887 2.876 2.980 12.121 -10.906 24.472 6 BB_DC12DOC13:DG841DG842_CC B 12 ? C 842 ? B 13 ? C 841 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" DCP 4 'SODIUM ION' NA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ALZ _pdbx_initial_refinement_model.details '2ALZ minus DNA' #