data_3ES1 # _entry.id 3ES1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ES1 pdb_00003es1 10.2210/pdb3es1/pdb RCSB RCSB049695 ? ? WWPDB D_1000049695 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 391033 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3ES1 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-10-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of protein with a cupin-like fold and unknown function (YP_001165807.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.91 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3ES1 _cell.length_a 78.330 _cell.length_b 78.330 _cell.length_c 107.320 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3ES1 _symmetry.Int_Tables_number 181 _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cupin 2, conserved barrel domain protein' 18955.590 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 water nat water 18.015 188 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SEALSDSGLPPVQRVVTGHDAHGRAVFKSEDVTPTR(MSE)IPSGDASFLLVWTTATVPADNNDETDGRQREAG LTLDGGSVIRVVD(MSE)LPGKESP(MSE)HRTNSIDYGIVLEGEIELELDDGAKRTVRQGGIIVQRGTNHLWRNTTDKP CRIAFILIEAPAYLHNGQPLPEDKPDHK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSEALSDSGLPPVQRVVTGHDAHGRAVFKSEDVTPTRMIPSGDASFLLVWTTATVPADNNDETDGRQREAGLTLDGGSV IRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAKRTVRQGGIIVQRGTNHLWRNTTDKPCRIAFILIEAPAYLHN GQPLPEDKPDHK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 391033 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 GLU n 1 5 ALA n 1 6 LEU n 1 7 SER n 1 8 ASP n 1 9 SER n 1 10 GLY n 1 11 LEU n 1 12 PRO n 1 13 PRO n 1 14 VAL n 1 15 GLN n 1 16 ARG n 1 17 VAL n 1 18 VAL n 1 19 THR n 1 20 GLY n 1 21 HIS n 1 22 ASP n 1 23 ALA n 1 24 HIS n 1 25 GLY n 1 26 ARG n 1 27 ALA n 1 28 VAL n 1 29 PHE n 1 30 LYS n 1 31 SER n 1 32 GLU n 1 33 ASP n 1 34 VAL n 1 35 THR n 1 36 PRO n 1 37 THR n 1 38 ARG n 1 39 MSE n 1 40 ILE n 1 41 PRO n 1 42 SER n 1 43 GLY n 1 44 ASP n 1 45 ALA n 1 46 SER n 1 47 PHE n 1 48 LEU n 1 49 LEU n 1 50 VAL n 1 51 TRP n 1 52 THR n 1 53 THR n 1 54 ALA n 1 55 THR n 1 56 VAL n 1 57 PRO n 1 58 ALA n 1 59 ASP n 1 60 ASN n 1 61 ASN n 1 62 ASP n 1 63 GLU n 1 64 THR n 1 65 ASP n 1 66 GLY n 1 67 ARG n 1 68 GLN n 1 69 ARG n 1 70 GLU n 1 71 ALA n 1 72 GLY n 1 73 LEU n 1 74 THR n 1 75 LEU n 1 76 ASP n 1 77 GLY n 1 78 GLY n 1 79 SER n 1 80 VAL n 1 81 ILE n 1 82 ARG n 1 83 VAL n 1 84 VAL n 1 85 ASP n 1 86 MSE n 1 87 LEU n 1 88 PRO n 1 89 GLY n 1 90 LYS n 1 91 GLU n 1 92 SER n 1 93 PRO n 1 94 MSE n 1 95 HIS n 1 96 ARG n 1 97 THR n 1 98 ASN n 1 99 SER n 1 100 ILE n 1 101 ASP n 1 102 TYR n 1 103 GLY n 1 104 ILE n 1 105 VAL n 1 106 LEU n 1 107 GLU n 1 108 GLY n 1 109 GLU n 1 110 ILE n 1 111 GLU n 1 112 LEU n 1 113 GLU n 1 114 LEU n 1 115 ASP n 1 116 ASP n 1 117 GLY n 1 118 ALA n 1 119 LYS n 1 120 ARG n 1 121 THR n 1 122 VAL n 1 123 ARG n 1 124 GLN n 1 125 GLY n 1 126 GLY n 1 127 ILE n 1 128 ILE n 1 129 VAL n 1 130 GLN n 1 131 ARG n 1 132 GLY n 1 133 THR n 1 134 ASN n 1 135 HIS n 1 136 LEU n 1 137 TRP n 1 138 ARG n 1 139 ASN n 1 140 THR n 1 141 THR n 1 142 ASP n 1 143 LYS n 1 144 PRO n 1 145 CYS n 1 146 ARG n 1 147 ILE n 1 148 ALA n 1 149 PHE n 1 150 ILE n 1 151 LEU n 1 152 ILE n 1 153 GLU n 1 154 ALA n 1 155 PRO n 1 156 ALA n 1 157 TYR n 1 158 LEU n 1 159 HIS n 1 160 ASN n 1 161 GLY n 1 162 GLN n 1 163 PRO n 1 164 LEU n 1 165 PRO n 1 166 GLU n 1 167 ASP n 1 168 LYS n 1 169 PRO n 1 170 ASP n 1 171 HIS n 1 172 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YP_001165807.1, Saro_3421,' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Novosphingobium aromaticivorans DSM 12444' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 279238 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4XEC0_NOVAD _struct_ref.pdbx_db_accession A4XEC0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSEALSDSGLPPVQRVVTGHDAHGRAVFKSEDVTPTRMIPSGDASFLLVWTTATVPADNNDETDGRQREAGLTLDGGSVI RVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAKRTVRQGGIIVQRGTNHLWRNTTDKPCRIAFILIEAPAYLHNG QPLPEDKPDHK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ES1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 172 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A4XEC0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 171 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 171 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3ES1 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A4XEC0 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3ES1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M NaThioCyanate, 20.0% PEG-3350, No Buffer pH 6.9, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2008-08-11 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.92522 1.0 2 0.97932 1.0 3 0.97879 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.92522,0.97932,0.97879 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3ES1 _reflns.d_resolution_high 1.91 _reflns.d_resolution_low 28.665 _reflns.number_obs 15326 _reflns.pdbx_Rmerge_I_obs 0.147 _reflns.percent_possible_obs 98.000 _reflns.B_iso_Wilson_estimate 22.050 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.430 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.91 1.98 22127 ? 2830 0.011 2.1 ? ? ? ? ? 97.40 1 1 1.98 2.06 22211 ? 2828 0.011 2.9 ? ? ? ? ? 97.60 2 1 2.06 2.15 20841 ? 2666 0.011 4.0 ? ? ? ? ? 97.50 3 1 2.15 2.26 21305 ? 2725 0.011 4.8 ? ? ? ? ? 97.80 4 1 2.26 2.41 23369 ? 2972 0.011 5.9 ? ? ? ? ? 97.90 5 1 2.41 2.59 21323 ? 2711 0.011 7.5 ? ? ? ? ? 98.20 6 1 2.59 2.85 22057 ? 2808 0.011 10.7 ? ? ? ? ? 98.40 7 1 2.85 3.26 22280 ? 2832 0.011 18.2 ? ? ? ? ? 98.50 8 1 3.26 4.10 22138 ? 2828 0.011 33.0 ? ? ? ? ? 98.90 9 1 4.10 28.665 22589 ? 2872 0.011 44.0 ? ? ? ? ? 98.20 10 1 # _refine.entry_id 3ES1 _refine.ls_d_res_high 1.910 _refine.ls_d_res_low 28.665 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.540 _refine.ls_number_reflns_obs 15326 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.ONE CHLORIDE ION FROM CRYSTALLIZATION WAS MODELED IN THE STRUCTURE. ; _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_R_work 0.170 _refine.ls_R_factor_R_free 0.205 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 765 _refine.B_iso_mean 22.970 _refine.aniso_B[1][1] 0.960 _refine.aniso_B[2][2] 0.960 _refine.aniso_B[3][3] -1.440 _refine.aniso_B[1][2] 0.480 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.pdbx_overall_ESU_R 0.136 _refine.pdbx_overall_ESU_R_Free 0.127 _refine.overall_SU_ML 0.087 _refine.overall_SU_B 5.399 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.B_iso_max 55.37 _refine.B_iso_min 12.45 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1237 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 1426 _refine_hist.d_res_high 1.910 _refine_hist.d_res_low 28.665 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1299 0.017 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 870 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1771 1.571 1.961 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2124 1.413 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 168 6.995 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 59 34.891 23.729 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 210 13.223 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12 18.022 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 201 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1476 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 250 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 831 0.815 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 337 0.226 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1347 1.323 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 468 2.097 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 424 3.084 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.910 _refine_ls_shell.d_res_low 1.960 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.580 _refine_ls_shell.number_reflns_R_work 1047 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.205 _refine_ls_shell.R_factor_R_free 0.247 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1100 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3ES1 _struct.title ;Crystal structure of protein with a cupin-like fold and unknown function (YP_001165807.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.91 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_001165807.1, protein with a cupin-like fold and unknown function, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Cupin domain, unknown function ; _struct_keywords.pdbx_keywords 'structural genomics, unknown function' _struct_keywords.entry_id 3ES1 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 65 ? ARG A 69 ? ASP A 64 ARG A 68 5 ? 5 HELX_P HELX_P2 2 ASP A 115 ? GLY A 117 ? ASP A 114 GLY A 116 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ARG 38 C ? ? ? 1_555 A MSE 39 N ? ? A ARG 37 A MSE 38 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale2 covale both ? A MSE 39 C ? ? ? 1_555 A ILE 40 N ? ? A MSE 38 A ILE 39 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale3 covale both ? A ASP 85 C ? ? ? 1_555 A MSE 86 N A ? A ASP 84 A MSE 85 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A ASP 85 C ? ? ? 1_555 A MSE 86 N B ? A ASP 84 A MSE 85 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale5 covale both ? A MSE 86 C A ? ? 1_555 A LEU 87 N ? ? A MSE 85 A LEU 86 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 86 C B ? ? 1_555 A LEU 87 N ? ? A MSE 85 A LEU 86 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale7 covale both ? A PRO 93 C ? ? ? 1_555 A MSE 94 N A ? A PRO 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale8 covale both ? A PRO 93 C ? ? ? 1_555 A MSE 94 N B ? A PRO 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale9 covale both ? A MSE 94 C A ? ? 1_555 A HIS 95 N A ? A MSE 93 A HIS 94 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? A MSE 94 C B ? ? 1_555 A HIS 95 N B ? A MSE 93 A HIS 94 1_555 ? ? ? ? ? ? ? 1.333 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 56 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 55 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 57 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 56 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 14 ? HIS A 21 ? VAL A 13 HIS A 20 A 2 ALA A 27 ? THR A 35 ? ALA A 26 THR A 34 B 1 ARG A 38 ? MSE A 39 ? ARG A 37 MSE A 38 B 2 ALA A 45 ? THR A 53 ? ALA A 44 THR A 52 B 3 SER A 79 ? MSE A 86 ? SER A 78 MSE A 85 B 4 CYS A 145 ? GLU A 153 ? CYS A 144 GLU A 152 B 5 SER A 99 ? GLU A 107 ? SER A 98 GLU A 106 B 6 ILE A 127 ? GLN A 130 ? ILE A 126 GLN A 129 C 1 LYS A 119 ? VAL A 122 ? LYS A 118 VAL A 121 C 2 ILE A 110 ? GLU A 113 ? ILE A 109 GLU A 112 C 3 LEU A 136 ? ARG A 138 ? LEU A 135 ARG A 137 D 1 LEU A 158 ? HIS A 159 ? LEU A 157 HIS A 158 D 2 GLN A 162 ? PRO A 163 ? GLN A 161 PRO A 162 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 18 ? N VAL A 17 O LYS A 30 ? O LYS A 29 B 1 2 N ARG A 38 ? N ARG A 37 O PHE A 47 ? O PHE A 46 B 2 3 N LEU A 48 ? N LEU A 47 O VAL A 83 ? O VAL A 82 B 3 4 N ARG A 82 ? N ARG A 81 O PHE A 149 ? O PHE A 148 B 4 5 O ILE A 152 ? O ILE A 151 N ILE A 100 ? N ILE A 99 B 5 6 N GLY A 103 ? N GLY A 102 O ILE A 128 ? O ILE A 127 C 1 2 O VAL A 122 ? O VAL A 121 N ILE A 110 ? N ILE A 109 C 2 3 N GLU A 111 ? N GLU A 110 O ARG A 138 ? O ARG A 137 D 1 2 N HIS A 159 ? N HIS A 158 O GLN A 162 ? O GLN A 161 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CL _struct_site.pdbx_auth_seq_id 172 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE CL A 172' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 LYS A 30 ? LYS A 29 . ? 1_555 ? 2 AC1 2 SER A 31 ? SER A 30 . ? 1_555 ? # _atom_sites.entry_id 3ES1 _atom_sites.fract_transf_matrix[1][1] 0.012767 _atom_sites.fract_transf_matrix[1][2] 0.007371 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014741 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009318 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 SER 3 2 ? ? ? A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 ASP 8 7 7 ASP ASP A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 PRO 13 12 12 PRO PRO A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 HIS 21 20 20 HIS HIS A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 HIS 24 23 23 HIS HIS A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 ARG 26 25 25 ARG ARG A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 SER 31 30 30 SER SER A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 PRO 36 35 35 PRO PRO A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 ARG 38 37 37 ARG ARG A . n A 1 39 MSE 39 38 38 MSE MSE A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 PRO 41 40 40 PRO PRO A . n A 1 42 SER 42 41 41 SER SER A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 ASP 44 43 43 ASP ASP A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 PHE 47 46 46 PHE PHE A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 TRP 51 50 50 TRP TRP A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 THR 53 52 52 THR THR A . n A 1 54 ALA 54 53 53 ALA ALA A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 PRO 57 56 56 PRO PRO A . n A 1 58 ALA 58 57 57 ALA ALA A . n A 1 59 ASP 59 58 58 ASP ASP A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 ASP 65 64 64 ASP ASP A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 ARG 67 66 66 ARG ARG A . n A 1 68 GLN 68 67 67 GLN GLN A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 ASP 76 75 75 ASP ASP A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 SER 79 78 78 SER SER A . n A 1 80 VAL 80 79 79 VAL VAL A . n A 1 81 ILE 81 80 80 ILE ILE A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 VAL 84 83 83 VAL VAL A . n A 1 85 ASP 85 84 84 ASP ASP A . n A 1 86 MSE 86 85 85 MSE MSE A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 PRO 88 87 87 PRO PRO A . n A 1 89 GLY 89 88 88 GLY GLY A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 PRO 93 92 92 PRO PRO A . n A 1 94 MSE 94 93 93 MSE MSE A . n A 1 95 HIS 95 94 94 HIS HIS A . n A 1 96 ARG 96 95 95 ARG ARG A . n A 1 97 THR 97 96 96 THR THR A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 TYR 102 101 101 TYR TYR A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 ILE 104 103 103 ILE ILE A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 ASP 115 114 114 ASP ASP A . n A 1 116 ASP 116 115 115 ASP ASP A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 ALA 118 117 117 ALA ALA A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 ARG 120 119 119 ARG ARG A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 ARG 123 122 122 ARG ARG A . n A 1 124 GLN 124 123 123 GLN GLN A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 VAL 129 128 128 VAL VAL A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 ARG 131 130 130 ARG ARG A . n A 1 132 GLY 132 131 131 GLY GLY A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 ASN 134 133 133 ASN ASN A . n A 1 135 HIS 135 134 134 HIS HIS A . n A 1 136 LEU 136 135 135 LEU LEU A . n A 1 137 TRP 137 136 136 TRP TRP A . n A 1 138 ARG 138 137 137 ARG ARG A . n A 1 139 ASN 139 138 138 ASN ASN A . n A 1 140 THR 140 139 139 THR THR A . n A 1 141 THR 141 140 140 THR THR A . n A 1 142 ASP 142 141 141 ASP ASP A . n A 1 143 LYS 143 142 142 LYS LYS A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 CYS 145 144 144 CYS CYS A . n A 1 146 ARG 146 145 145 ARG ARG A . n A 1 147 ILE 147 146 146 ILE ILE A . n A 1 148 ALA 148 147 147 ALA ALA A . n A 1 149 PHE 149 148 148 PHE PHE A . n A 1 150 ILE 150 149 149 ILE ILE A . n A 1 151 LEU 151 150 150 LEU LEU A . n A 1 152 ILE 152 151 151 ILE ILE A . n A 1 153 GLU 153 152 152 GLU GLU A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 PRO 155 154 154 PRO PRO A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 TYR 157 156 156 TYR TYR A . n A 1 158 LEU 158 157 157 LEU LEU A . n A 1 159 HIS 159 158 158 HIS HIS A . n A 1 160 ASN 160 159 159 ASN ASN A . n A 1 161 GLY 161 160 160 GLY GLY A . n A 1 162 GLN 162 161 161 GLN GLN A . n A 1 163 PRO 163 162 162 PRO PRO A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 PRO 165 164 164 PRO PRO A . n A 1 166 GLU 166 165 165 GLU GLU A . n A 1 167 ASP 167 166 ? ? ? A . n A 1 168 LYS 168 167 ? ? ? A . n A 1 169 PRO 169 168 ? ? ? A . n A 1 170 ASP 170 169 ? ? ? A . n A 1 171 HIS 171 170 ? ? ? A . n A 1 172 LYS 172 171 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 172 1 CL CL A . C 3 HOH 1 173 2 HOH HOH A . C 3 HOH 2 174 3 HOH HOH A . C 3 HOH 3 175 4 HOH HOH A . C 3 HOH 4 176 5 HOH HOH A . C 3 HOH 5 177 6 HOH HOH A . C 3 HOH 6 178 7 HOH HOH A . C 3 HOH 7 179 8 HOH HOH A . C 3 HOH 8 180 9 HOH HOH A . C 3 HOH 9 181 10 HOH HOH A . C 3 HOH 10 182 11 HOH HOH A . C 3 HOH 11 183 12 HOH HOH A . C 3 HOH 12 184 13 HOH HOH A . C 3 HOH 13 185 14 HOH HOH A . C 3 HOH 14 186 15 HOH HOH A . C 3 HOH 15 187 16 HOH HOH A . C 3 HOH 16 188 17 HOH HOH A . C 3 HOH 17 189 18 HOH HOH A . C 3 HOH 18 190 19 HOH HOH A . C 3 HOH 19 191 20 HOH HOH A . C 3 HOH 20 192 21 HOH HOH A . C 3 HOH 21 193 22 HOH HOH A . C 3 HOH 22 194 23 HOH HOH A . C 3 HOH 23 195 24 HOH HOH A . C 3 HOH 24 196 25 HOH HOH A . C 3 HOH 25 197 26 HOH HOH A . C 3 HOH 26 198 27 HOH HOH A . C 3 HOH 27 199 28 HOH HOH A . C 3 HOH 28 200 29 HOH HOH A . C 3 HOH 29 201 30 HOH HOH A . C 3 HOH 30 202 31 HOH HOH A . C 3 HOH 31 203 32 HOH HOH A . C 3 HOH 32 204 33 HOH HOH A . C 3 HOH 33 205 34 HOH HOH A . C 3 HOH 34 206 35 HOH HOH A . C 3 HOH 35 207 36 HOH HOH A . C 3 HOH 36 208 37 HOH HOH A . C 3 HOH 37 209 38 HOH HOH A . C 3 HOH 38 210 39 HOH HOH A . C 3 HOH 39 211 40 HOH HOH A . C 3 HOH 40 212 41 HOH HOH A . C 3 HOH 41 213 42 HOH HOH A . C 3 HOH 42 214 43 HOH HOH A . C 3 HOH 43 215 44 HOH HOH A . C 3 HOH 44 216 45 HOH HOH A . C 3 HOH 45 217 46 HOH HOH A . C 3 HOH 46 218 47 HOH HOH A . C 3 HOH 47 219 48 HOH HOH A . C 3 HOH 48 220 49 HOH HOH A . C 3 HOH 49 221 50 HOH HOH A . C 3 HOH 50 222 51 HOH HOH A . C 3 HOH 51 223 52 HOH HOH A . C 3 HOH 52 224 53 HOH HOH A . C 3 HOH 53 225 54 HOH HOH A . C 3 HOH 54 226 55 HOH HOH A . C 3 HOH 55 227 56 HOH HOH A . C 3 HOH 56 228 57 HOH HOH A . C 3 HOH 57 229 58 HOH HOH A . C 3 HOH 58 230 59 HOH HOH A . C 3 HOH 59 231 60 HOH HOH A . C 3 HOH 60 232 61 HOH HOH A . C 3 HOH 61 233 62 HOH HOH A . C 3 HOH 62 234 63 HOH HOH A . C 3 HOH 63 235 64 HOH HOH A . C 3 HOH 64 236 65 HOH HOH A . C 3 HOH 65 237 66 HOH HOH A . C 3 HOH 66 238 67 HOH HOH A . C 3 HOH 67 239 68 HOH HOH A . C 3 HOH 68 240 69 HOH HOH A . C 3 HOH 69 241 70 HOH HOH A . C 3 HOH 70 242 71 HOH HOH A . C 3 HOH 71 243 72 HOH HOH A . C 3 HOH 72 244 73 HOH HOH A . C 3 HOH 73 245 74 HOH HOH A . C 3 HOH 74 246 75 HOH HOH A . C 3 HOH 75 247 76 HOH HOH A . C 3 HOH 76 248 77 HOH HOH A . C 3 HOH 77 249 78 HOH HOH A . C 3 HOH 78 250 79 HOH HOH A . C 3 HOH 79 251 80 HOH HOH A . C 3 HOH 80 252 81 HOH HOH A . C 3 HOH 81 253 82 HOH HOH A . C 3 HOH 82 254 83 HOH HOH A . C 3 HOH 83 255 84 HOH HOH A . C 3 HOH 84 256 85 HOH HOH A . C 3 HOH 85 257 86 HOH HOH A . C 3 HOH 86 258 87 HOH HOH A . C 3 HOH 87 259 88 HOH HOH A . C 3 HOH 88 260 89 HOH HOH A . C 3 HOH 89 261 90 HOH HOH A . C 3 HOH 90 262 91 HOH HOH A . C 3 HOH 91 263 92 HOH HOH A . C 3 HOH 92 264 93 HOH HOH A . C 3 HOH 93 265 94 HOH HOH A . C 3 HOH 94 266 95 HOH HOH A . C 3 HOH 95 267 96 HOH HOH A . C 3 HOH 96 268 97 HOH HOH A . C 3 HOH 97 269 98 HOH HOH A . C 3 HOH 98 270 99 HOH HOH A . C 3 HOH 99 271 100 HOH HOH A . C 3 HOH 100 272 101 HOH HOH A . C 3 HOH 101 273 102 HOH HOH A . C 3 HOH 102 274 103 HOH HOH A . C 3 HOH 103 275 104 HOH HOH A . C 3 HOH 104 276 105 HOH HOH A . C 3 HOH 105 277 106 HOH HOH A . C 3 HOH 106 278 107 HOH HOH A . C 3 HOH 107 279 108 HOH HOH A . C 3 HOH 108 280 109 HOH HOH A . C 3 HOH 109 281 110 HOH HOH A . C 3 HOH 110 282 111 HOH HOH A . C 3 HOH 111 283 112 HOH HOH A . C 3 HOH 112 284 113 HOH HOH A . C 3 HOH 113 285 114 HOH HOH A . C 3 HOH 114 286 115 HOH HOH A . C 3 HOH 115 287 116 HOH HOH A . C 3 HOH 116 288 117 HOH HOH A . C 3 HOH 117 289 118 HOH HOH A . C 3 HOH 118 290 119 HOH HOH A . C 3 HOH 119 291 120 HOH HOH A . C 3 HOH 120 292 121 HOH HOH A . C 3 HOH 121 293 122 HOH HOH A . C 3 HOH 122 294 123 HOH HOH A . C 3 HOH 123 295 124 HOH HOH A . C 3 HOH 124 296 125 HOH HOH A . C 3 HOH 125 297 126 HOH HOH A . C 3 HOH 126 298 127 HOH HOH A . C 3 HOH 127 299 128 HOH HOH A . C 3 HOH 128 300 129 HOH HOH A . C 3 HOH 129 301 130 HOH HOH A . C 3 HOH 130 302 131 HOH HOH A . C 3 HOH 131 303 132 HOH HOH A . C 3 HOH 132 304 133 HOH HOH A . C 3 HOH 133 305 134 HOH HOH A . C 3 HOH 134 306 135 HOH HOH A . C 3 HOH 135 307 136 HOH HOH A . C 3 HOH 136 308 137 HOH HOH A . C 3 HOH 137 309 138 HOH HOH A . C 3 HOH 138 310 139 HOH HOH A . C 3 HOH 139 311 140 HOH HOH A . C 3 HOH 140 312 141 HOH HOH A . C 3 HOH 141 313 142 HOH HOH A . C 3 HOH 142 314 143 HOH HOH A . C 3 HOH 143 315 144 HOH HOH A . C 3 HOH 144 316 145 HOH HOH A . C 3 HOH 145 317 146 HOH HOH A . C 3 HOH 146 318 147 HOH HOH A . C 3 HOH 147 319 148 HOH HOH A . C 3 HOH 148 320 149 HOH HOH A . C 3 HOH 149 321 150 HOH HOH A . C 3 HOH 150 322 151 HOH HOH A . C 3 HOH 151 323 152 HOH HOH A . C 3 HOH 152 324 153 HOH HOH A . C 3 HOH 153 325 154 HOH HOH A . C 3 HOH 154 326 155 HOH HOH A . C 3 HOH 155 327 156 HOH HOH A . C 3 HOH 156 328 157 HOH HOH A . C 3 HOH 157 329 158 HOH HOH A . C 3 HOH 158 330 159 HOH HOH A . C 3 HOH 159 331 160 HOH HOH A . C 3 HOH 160 332 161 HOH HOH A . C 3 HOH 161 333 162 HOH HOH A . C 3 HOH 162 334 163 HOH HOH A . C 3 HOH 163 335 164 HOH HOH A . C 3 HOH 164 336 165 HOH HOH A . C 3 HOH 165 337 166 HOH HOH A . C 3 HOH 166 338 167 HOH HOH A . C 3 HOH 167 339 168 HOH HOH A . C 3 HOH 168 340 169 HOH HOH A . C 3 HOH 169 341 170 HOH HOH A . C 3 HOH 170 342 171 HOH HOH A . C 3 HOH 171 343 172 HOH HOH A . C 3 HOH 172 344 173 HOH HOH A . C 3 HOH 173 345 174 HOH HOH A . C 3 HOH 174 346 175 HOH HOH A . C 3 HOH 175 347 176 HOH HOH A . C 3 HOH 176 348 177 HOH HOH A . C 3 HOH 177 349 178 HOH HOH A . C 3 HOH 178 350 179 HOH HOH A . C 3 HOH 179 351 180 HOH HOH A . C 3 HOH 180 352 181 HOH HOH A . C 3 HOH 181 353 182 HOH HOH A . C 3 HOH 182 354 183 HOH HOH A . C 3 HOH 183 355 184 HOH HOH A . C 3 HOH 184 356 185 HOH HOH A . C 3 HOH 185 357 186 HOH HOH A . C 3 HOH 186 358 187 HOH HOH A . C 3 HOH 187 359 188 HOH HOH A . C 3 HOH 188 360 189 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 39 A MSE 38 ? MET SELENOMETHIONINE 2 A MSE 86 A MSE 85 ? MET SELENOMETHIONINE 3 A MSE 94 A MSE 93 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6350 ? 1 MORE -52 ? 1 'SSA (A^2)' 14210 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/3 0.5000000000 -0.8660254038 0.0000000000 39.1650000000 -0.8660254038 -0.5000000000 0.0000000000 67.8357698784 0.0000000000 0.0000000000 -1.0000000000 35.7733333333 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 210 ? C HOH . 2 1 A HOH 227 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 54.2608 _pdbx_refine_tls.origin_y 22.7422 _pdbx_refine_tls.origin_z 15.0084 _pdbx_refine_tls.T[1][1] 0.0041 _pdbx_refine_tls.T[2][2] -0.0414 _pdbx_refine_tls.T[3][3] -0.0164 _pdbx_refine_tls.T[1][2] -0.0307 _pdbx_refine_tls.T[1][3] -0.0067 _pdbx_refine_tls.T[2][3] 0.0031 _pdbx_refine_tls.L[1][1] 0.2197 _pdbx_refine_tls.L[2][2] 0.3199 _pdbx_refine_tls.L[3][3] 0.4971 _pdbx_refine_tls.L[1][2] 0.0976 _pdbx_refine_tls.L[1][3] -0.0336 _pdbx_refine_tls.L[2][3] -0.0817 _pdbx_refine_tls.S[1][1] -0.0146 _pdbx_refine_tls.S[2][2] -0.0206 _pdbx_refine_tls.S[3][3] 0.0353 _pdbx_refine_tls.S[1][2] 0.0042 _pdbx_refine_tls.S[1][3] 0.0034 _pdbx_refine_tls.S[2][3] -0.0653 _pdbx_refine_tls.S[2][1] -0.0202 _pdbx_refine_tls.S[3][1] -0.0684 _pdbx_refine_tls.S[3][2] 0.0190 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 165 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_seq_id 3 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.4.0067 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHARP . ? ? ? ? phasing ? ? ? 8 # _pdbx_entry_details.entry_id 3ES1 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 119 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 119 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 119 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 115.96 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -4.34 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 72 ? ? -89.88 -76.91 2 1 THR A 73 ? ? -41.77 108.72 3 1 LEU A 113 ? ? -108.21 -141.78 4 1 ARG A 130 ? ? -98.38 55.69 5 1 GLU A 152 ? ? -35.76 130.85 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 69 ? CG ? A GLU 70 CG 2 1 Y 1 A GLU 69 ? CD ? A GLU 70 CD 3 1 Y 1 A GLU 69 ? OE1 ? A GLU 70 OE1 4 1 Y 1 A GLU 69 ? OE2 ? A GLU 70 OE2 5 1 Y 1 A LYS 142 ? CE ? A LYS 143 CE 6 1 Y 1 A LYS 142 ? NZ ? A LYS 143 NZ 7 1 Y 1 A GLU 165 ? CG ? A GLU 166 CG 8 1 Y 1 A GLU 165 ? CD ? A GLU 166 CD 9 1 Y 1 A GLU 165 ? OE1 ? A GLU 166 OE1 10 1 Y 1 A GLU 165 ? OE2 ? A GLU 166 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A SER 2 ? A SER 3 4 1 Y 1 A ASP 166 ? A ASP 167 5 1 Y 1 A LYS 167 ? A LYS 168 6 1 Y 1 A PRO 168 ? A PRO 169 7 1 Y 1 A ASP 169 ? A ASP 170 8 1 Y 1 A HIS 170 ? A HIS 171 9 1 Y 1 A LYS 171 ? A LYS 172 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH #