HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-OCT-08 3ES4 TITLE CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION (DUF861) WITH A RMLC- TITLE 2 LIKE CUPIN FOLD (17741406) FROM AGROBACTERIUM TUMEFACIENS STR. C58 TITLE 3 (DUPONT) AT 1.64 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN DUF861 WITH A RMLC-LIKE CUPIN FOLD; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS STR. C58; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 GENE: 17741406, AGR_L_3519, ATU3045; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS 17741406, PROTEIN OF UNKNOWN FUNCTION (DUF861) WITH A RMLC-LIKE CUPIN KEYWDS 2 FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3ES4 1 REMARK SEQADV REVDAT 5 24-JUL-19 3ES4 1 REMARK LINK REVDAT 4 25-OCT-17 3ES4 1 REMARK REVDAT 3 13-JUL-11 3ES4 1 VERSN REVDAT 2 24-FEB-09 3ES4 1 VERSN REVDAT 1 14-OCT-08 3ES4 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION (DUF861) JRNL TITL 2 WITH A RMLC-LIKE CUPIN FOLD (17741406) FROM AGROBACTERIUM JRNL TITL 3 TUMEFACIENS STR. C58 (DUPONT) AT 1.64 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 34317 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.160 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1735 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2294 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.1840 REMARK 3 BIN FREE R VALUE SET COUNT : 113 REMARK 3 BIN FREE R VALUE : 0.2170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1758 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 17.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.070 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.393 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1958 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1340 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2666 ; 1.605 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3282 ; 0.865 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 5.882 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;28.322 ;24.474 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 315 ;12.408 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.484 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 294 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2231 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 369 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 343 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1415 ; 0.213 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 932 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1115 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 237 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.313 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.317 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1335 ; 2.255 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 497 ; 0.507 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2037 ; 2.532 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 788 ; 2.610 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 629 ; 3.835 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 113 6 REMARK 3 1 B 3 B 113 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 1338 ; 0.540 ; 5.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1338 ; 1.680 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): -8.9776 17.6785 42.1744 REMARK 3 T TENSOR REMARK 3 T11: -0.0152 T22: -0.0311 REMARK 3 T33: -0.0196 T12: 0.0029 REMARK 3 T13: 0.0147 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.8484 L22: 0.4315 REMARK 3 L33: 0.2895 L12: 0.1408 REMARK 3 L13: -0.1532 L23: 0.0156 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.0274 S13: 0.0112 REMARK 3 S21: -0.0614 S22: 0.0315 S23: -0.0834 REMARK 3 S31: -0.0220 S32: 0.0463 S33: -0.0149 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): -27.4862 13.2948 48.6654 REMARK 3 T TENSOR REMARK 3 T11: -0.0286 T22: -0.0162 REMARK 3 T33: -0.0317 T12: 0.0054 REMARK 3 T13: 0.0135 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.0242 L22: 0.6277 REMARK 3 L33: 0.6301 L12: 0.4059 REMARK 3 L13: 0.0299 L23: 0.2436 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: -0.0683 S13: 0.0864 REMARK 3 S21: -0.0092 S22: -0.0550 S23: 0.1033 REMARK 3 S31: -0.0015 S32: -0.1042 S33: 0.0199 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 (1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 (2). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. REMARK 3 (3). ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 (4). CL ION AND 1,2-ETHYLENE GLYCOL(EDO) FROM EITHER REMARK 3 CRYSTALLIZATION BUFFER OR CRYO SOLUTION WERE MODELED. REMARK 4 REMARK 4 3ES4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34348 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 29.285 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 5.9270 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : 0.37100 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M NA3CITRATE, 0.1M HEPES PH 7.5, REMARK 280 NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.62700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.49746 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.71833 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 47.62700 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 27.49746 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.71833 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 47.62700 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 27.49746 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.71833 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.99492 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 55.43667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 54.99492 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 55.43667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 54.99492 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 55.43667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 77 CG OD1 OD2 REMARK 470 GLU B 38 CG CD OE1 OE2 REMARK 470 ASP B 77 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 36 35.80 -88.82 REMARK 500 ASN A 39 73.84 -156.26 REMARK 500 ALA A 76 -128.38 49.75 REMARK 500 SER A 104 122.72 -39.18 REMARK 500 ALA B 17 -141.28 -123.04 REMARK 500 ALA B 17 -135.81 -123.04 REMARK 500 ASP B 36 31.25 -86.20 REMARK 500 ALA B 76 -130.89 51.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 119 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 119 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 120 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 121 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 122 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 390432 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3ES4 A 1 115 UNP A9CEL1 A9CEL1_AGRT5 1 115 DBREF 3ES4 B 1 115 UNP A9CEL1 A9CEL1_AGRT5 1 115 SEQADV 3ES4 GLY A 0 UNP A9CEL1 EXPRESSION TAG SEQADV 3ES4 GLY B 0 UNP A9CEL1 EXPRESSION TAG SEQRES 1 A 116 GLY MSE THR MSE PRO ILE PHE ASN ILE SER ASP ASP VAL SEQRES 2 A 116 ASP LEU VAL PRO ALA MSE PRO ALA GLU GLY ARG ASP GLY SEQRES 3 A 116 GLY SER TYR ARG ARG GLN ILE TRP GLN ASP ASP VAL GLU SEQRES 4 A 116 ASN GLY THR ILE VAL ALA VAL TRP MSE ALA GLU PRO GLY SEQRES 5 A 116 ILE TYR ASN TYR ALA GLY ARG ASP LEU GLU GLU THR PHE SEQRES 6 A 116 VAL VAL VAL GLU GLY GLU ALA LEU TYR SER GLN ALA ASP SEQRES 7 A 116 ALA ASP PRO VAL LYS ILE GLY PRO GLY SER ILE VAL SER SEQRES 8 A 116 ILE ALA LYS GLY VAL PRO SER ARG LEU GLU ILE LEU SER SEQRES 9 A 116 SER PHE ARG LYS LEU ALA THR VAL ILE PRO LYS PRO SEQRES 1 B 116 GLY MSE THR MSE PRO ILE PHE ASN ILE SER ASP ASP VAL SEQRES 2 B 116 ASP LEU VAL PRO ALA MSE PRO ALA GLU GLY ARG ASP GLY SEQRES 3 B 116 GLY SER TYR ARG ARG GLN ILE TRP GLN ASP ASP VAL GLU SEQRES 4 B 116 ASN GLY THR ILE VAL ALA VAL TRP MSE ALA GLU PRO GLY SEQRES 5 B 116 ILE TYR ASN TYR ALA GLY ARG ASP LEU GLU GLU THR PHE SEQRES 6 B 116 VAL VAL VAL GLU GLY GLU ALA LEU TYR SER GLN ALA ASP SEQRES 7 B 116 ALA ASP PRO VAL LYS ILE GLY PRO GLY SER ILE VAL SER SEQRES 8 B 116 ILE ALA LYS GLY VAL PRO SER ARG LEU GLU ILE LEU SER SEQRES 9 B 116 SER PHE ARG LYS LEU ALA THR VAL ILE PRO LYS PRO MODRES 3ES4 MSE A 1 MET SELENOMETHIONINE MODRES 3ES4 MSE A 3 MET SELENOMETHIONINE MODRES 3ES4 MSE A 18 MET SELENOMETHIONINE MODRES 3ES4 MSE A 47 MET SELENOMETHIONINE MODRES 3ES4 MSE B 1 MET SELENOMETHIONINE MODRES 3ES4 MSE B 3 MET SELENOMETHIONINE MODRES 3ES4 MSE B 18 MET SELENOMETHIONINE MODRES 3ES4 MSE B 47 MET SELENOMETHIONINE HET MSE A 1 16 HET MSE A 3 8 HET MSE A 18 16 HET MSE A 47 16 HET MSE B 1 16 HET MSE B 3 8 HET MSE B 18 16 HET MSE B 47 8 HET CL A 116 1 HET EDO A 117 4 HET EDO A 118 4 HET EDO A 119 4 HET EDO A 120 4 HET EDO A 121 4 HET EDO A 122 4 HET EDO B 116 4 HET EDO B 117 4 HET EDO B 118 4 HET EDO B 119 4 HET EDO B 120 4 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 CL CL 1- FORMUL 4 EDO 11(C2 H6 O2) FORMUL 15 HOH *300(H2 O) SHEET 1 A 7 ILE A 5 ASN A 7 0 SHEET 2 A 7 SER B 87 ILE B 91 -1 O ILE B 88 N PHE A 6 SHEET 3 A 7 LEU B 60 GLU B 68 -1 N GLU B 62 O ILE B 91 SHEET 4 A 7 PHE B 105 PRO B 113 -1 O ILE B 112 N GLU B 61 SHEET 5 A 7 ILE B 42 ALA B 48 -1 N ALA B 44 O ALA B 109 SHEET 6 A 7 GLY B 26 GLN B 34 -1 N ARG B 30 O VAL B 45 SHEET 7 A 7 VAL B 15 PRO B 19 -1 N ALA B 17 O SER B 27 SHEET 1 B 7 VAL A 15 PRO A 16 0 SHEET 2 B 7 SER A 27 GLN A 34 -1 O ARG A 29 N VAL A 15 SHEET 3 B 7 ILE A 42 ALA A 48 -1 O VAL A 43 N TRP A 33 SHEET 4 B 7 PHE A 105 PRO A 113 -1 O ALA A 109 N ALA A 44 SHEET 5 B 7 LEU A 60 GLU A 68 -1 N GLU A 61 O ILE A 112 SHEET 6 B 7 SER A 87 ILE A 91 -1 O ILE A 91 N GLU A 62 SHEET 7 B 7 ILE B 5 ASN B 7 -1 O PHE B 6 N ILE A 88 SHEET 1 C 4 GLY A 51 TYR A 55 0 SHEET 2 C 4 SER A 97 ILE A 101 -1 O LEU A 99 N TYR A 53 SHEET 3 C 4 ALA A 71 GLN A 75 -1 N LEU A 72 O GLU A 100 SHEET 4 C 4 VAL A 81 ILE A 83 -1 O ILE A 83 N ALA A 71 SHEET 1 D 4 GLY B 51 TYR B 55 0 SHEET 2 D 4 SER B 97 ILE B 101 -1 O SER B 97 N TYR B 55 SHEET 3 D 4 ALA B 71 GLN B 75 -1 N LEU B 72 O GLU B 100 SHEET 4 D 4 VAL B 81 ILE B 83 -1 O VAL B 81 N TYR B 73 LINK C GLY A 0 N AMSE A 1 1555 1555 1.32 LINK C GLY A 0 N BMSE A 1 1555 1555 1.33 LINK C AMSE A 1 N THR A 2 1555 1555 1.33 LINK C BMSE A 1 N THR A 2 1555 1555 1.32 LINK C THR A 2 N MSE A 3 1555 1555 1.33 LINK C MSE A 3 N PRO A 4 1555 1555 1.34 LINK C ALA A 17 N AMSE A 18 1555 1555 1.33 LINK C ALA A 17 N BMSE A 18 1555 1555 1.32 LINK C AMSE A 18 N PRO A 19 1555 1555 1.35 LINK C BMSE A 18 N PRO A 19 1555 1555 1.35 LINK C TRP A 46 N AMSE A 47 1555 1555 1.32 LINK C TRP A 46 N BMSE A 47 1555 1555 1.33 LINK C AMSE A 47 N ALA A 48 1555 1555 1.32 LINK C BMSE A 47 N ALA A 48 1555 1555 1.33 LINK C GLY B 0 N AMSE B 1 1555 1555 1.32 LINK C GLY B 0 N BMSE B 1 1555 1555 1.34 LINK C AMSE B 1 N THR B 2 1555 1555 1.33 LINK C BMSE B 1 N THR B 2 1555 1555 1.33 LINK C THR B 2 N MSE B 3 1555 1555 1.33 LINK C MSE B 3 N PRO B 4 1555 1555 1.35 LINK C ALA B 17 N AMSE B 18 1555 1555 1.33 LINK C ALA B 17 N BMSE B 18 1555 1555 1.33 LINK C AMSE B 18 N PRO B 19 1555 1555 1.35 LINK C BMSE B 18 N PRO B 19 1555 1555 1.35 LINK C TRP B 46 N MSE B 47 1555 1555 1.34 LINK C MSE B 47 N ALA B 48 1555 1555 1.33 SITE 1 AC1 6 GLY A 0 MSE A 1 THR A 2 MSE A 3 SITE 2 AC1 6 GLU A 21 GLY A 22 SITE 1 AC2 4 PHE B 6 ARG B 30 HOH B 138 HOH B 173 SITE 1 AC3 8 MSE A 47 ALA A 48 GLU A 49 SER A 104 SITE 2 AC3 8 PHE A 105 ARG A 106 HOH A 186 HOH A 309 SITE 1 AC4 5 GLN B 31 ILE B 32 TRP B 33 GLN B 34 SITE 2 AC4 5 HOH B 169 SITE 1 AC5 4 PHE A 6 GLN A 31 ILE A 32 ASP B 24 SITE 1 AC6 1 ARG B 29 SITE 1 AC7 6 ASN A 54 TYR A 55 ALA A 56 HOH A 229 SITE 2 AC7 6 HOH A 298 HOH B 227 SITE 1 AC8 5 PRO A 4 HOH A 137 HOH A 212 SER B 90 SITE 2 AC8 5 HOH B 206 SITE 1 AC9 5 HOH A 159 TYR B 55 ARG B 58 GLU B 62 SITE 2 AC9 5 LYS B 107 SITE 1 BC1 5 SER A 9 ASP A 10 ASP A 11 GLY A 26 SITE 2 BC1 5 HOH A 244 SITE 1 BC2 8 GLU A 38 SER A 90 ALA A 92 HOH A 153 SITE 2 BC2 8 HOH A 235 HOH A 237 HOH A 239 TRP B 33 SITE 1 BC3 5 SER A 74 GLN A 75 ALA A 76 PRO A 96 SITE 2 BC3 5 SER A 97 CRYST1 95.254 95.254 83.155 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010498 0.006061 0.000000 0.00000 SCALE2 0.000000 0.012122 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012026 0.00000