data_3ETP # _entry.id 3ETP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ETP pdb_00003etp 10.2210/pdb3etp/pdb RCSB RCSB049754 ? ? WWPDB D_1000049754 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1NUK . unspecified PDB 1KGY . unspecified PDB 1SHW . unspecified PDB 2QBX . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ETP _pdbx_database_status.recvd_initial_deposition_date 2008-10-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Goldgur, Y.' 1 'Paavilainen, S.' 2 'Nikolov, D.B.' 3 'Himanen, J.P.' 4 # _citation.id primary _citation.title 'Structure of the ligand-binding domain of the EphB2 receptor at 2 A resolution.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 65 _citation.page_first 71 _citation.page_last 74 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19193989 _citation.pdbx_database_id_DOI 10.1107/S1744309108043078 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goldgur, Y.' 1 ? primary 'Paavilainen, S.' 2 ? primary 'Nikolov, D.' 3 ? primary 'Himanen, J.P.' 4 ? # _cell.entry_id 3ETP _cell.length_a 54.028 _cell.length_b 54.028 _cell.length_c 157.412 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3ETP _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ephrin type-B receptor 2' 21437.211 1 2.7.10.1 ? 'UNP residues 28-207' ? 2 water nat water 18.015 185 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Tyrosine-protein kinase receptor EPH-3, Neural kinase, Nuk receptor tyrosine kinase, SEK-3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AMAISDPEETLMDSTTATAELGWMVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKF SVRDCSSIPSVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESISQVDLGGRVMKINTEVRSFGPVSRN GFYLAFQDYGGCMSLIAVRVFYRKCPR ; _entity_poly.pdbx_seq_one_letter_code_can ;AMAISDPEETLMDSTTATAELGWMVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKF SVRDCSSIPSVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESISQVDLGGRVMKINTEVRSFGPVSRN GFYLAFQDYGGCMSLIAVRVFYRKCPR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 MET n 1 3 ALA n 1 4 ILE n 1 5 SER n 1 6 ASP n 1 7 PRO n 1 8 GLU n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 MET n 1 13 ASP n 1 14 SER n 1 15 THR n 1 16 THR n 1 17 ALA n 1 18 THR n 1 19 ALA n 1 20 GLU n 1 21 LEU n 1 22 GLY n 1 23 TRP n 1 24 MET n 1 25 VAL n 1 26 HIS n 1 27 PRO n 1 28 PRO n 1 29 SER n 1 30 GLY n 1 31 TRP n 1 32 GLU n 1 33 GLU n 1 34 VAL n 1 35 SER n 1 36 GLY n 1 37 TYR n 1 38 ASP n 1 39 GLU n 1 40 ASN n 1 41 MET n 1 42 ASN n 1 43 THR n 1 44 ILE n 1 45 ARG n 1 46 THR n 1 47 TYR n 1 48 GLN n 1 49 VAL n 1 50 CYS n 1 51 ASN n 1 52 VAL n 1 53 PHE n 1 54 GLU n 1 55 SER n 1 56 SER n 1 57 GLN n 1 58 ASN n 1 59 ASN n 1 60 TRP n 1 61 LEU n 1 62 ARG n 1 63 THR n 1 64 LYS n 1 65 PHE n 1 66 ILE n 1 67 ARG n 1 68 ARG n 1 69 ARG n 1 70 GLY n 1 71 ALA n 1 72 HIS n 1 73 ARG n 1 74 ILE n 1 75 HIS n 1 76 VAL n 1 77 GLU n 1 78 MET n 1 79 LYS n 1 80 PHE n 1 81 SER n 1 82 VAL n 1 83 ARG n 1 84 ASP n 1 85 CYS n 1 86 SER n 1 87 SER n 1 88 ILE n 1 89 PRO n 1 90 SER n 1 91 VAL n 1 92 PRO n 1 93 GLY n 1 94 SER n 1 95 CYS n 1 96 LYS n 1 97 GLU n 1 98 THR n 1 99 PHE n 1 100 ASN n 1 101 LEU n 1 102 TYR n 1 103 TYR n 1 104 TYR n 1 105 GLU n 1 106 ALA n 1 107 ASP n 1 108 PHE n 1 109 ASP n 1 110 LEU n 1 111 ALA n 1 112 THR n 1 113 LYS n 1 114 THR n 1 115 PHE n 1 116 PRO n 1 117 ASN n 1 118 TRP n 1 119 MET n 1 120 GLU n 1 121 ASN n 1 122 PRO n 1 123 TRP n 1 124 VAL n 1 125 LYS n 1 126 VAL n 1 127 ASP n 1 128 THR n 1 129 ILE n 1 130 ALA n 1 131 ALA n 1 132 ASP n 1 133 GLU n 1 134 SER n 1 135 ILE n 1 136 SER n 1 137 GLN n 1 138 VAL n 1 139 ASP n 1 140 LEU n 1 141 GLY n 1 142 GLY n 1 143 ARG n 1 144 VAL n 1 145 MET n 1 146 LYS n 1 147 ILE n 1 148 ASN n 1 149 THR n 1 150 GLU n 1 151 VAL n 1 152 ARG n 1 153 SER n 1 154 PHE n 1 155 GLY n 1 156 PRO n 1 157 VAL n 1 158 SER n 1 159 ARG n 1 160 ASN n 1 161 GLY n 1 162 PHE n 1 163 TYR n 1 164 LEU n 1 165 ALA n 1 166 PHE n 1 167 GLN n 1 168 ASP n 1 169 TYR n 1 170 GLY n 1 171 GLY n 1 172 CYS n 1 173 MET n 1 174 SER n 1 175 LEU n 1 176 ILE n 1 177 ALA n 1 178 VAL n 1 179 ARG n 1 180 VAL n 1 181 PHE n 1 182 TYR n 1 183 ARG n 1 184 LYS n 1 185 CYS n 1 186 PRO n 1 187 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Ephb2, Epth3, Nuk, Sek3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain AD494 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EPHB2_MOUSE _struct_ref.pdbx_db_accession P54763 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EETLMDSTTATAELGWMVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSS IPSVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSRNGFYLAFQ DYGGCMSLIAVRVFYRKCPR ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ETP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 187 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P54763 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 28 _struct_ref_seq.pdbx_auth_seq_align_end 207 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ETP ALA A 1 ? UNP P54763 ? ? 'expression tag' 21 1 1 3ETP MET A 2 ? UNP P54763 ? ? 'expression tag' 22 2 1 3ETP ALA A 3 ? UNP P54763 ? ? 'expression tag' 23 3 1 3ETP ILE A 4 ? UNP P54763 ? ? 'expression tag' 24 4 1 3ETP SER A 5 ? UNP P54763 ? ? 'expression tag' 25 5 1 3ETP ASP A 6 ? UNP P54763 ? ? 'expression tag' 26 6 1 3ETP PRO A 7 ? UNP P54763 ? ? 'expression tag' 27 7 1 3ETP ILE A 135 ? UNP P54763 PHE 155 'SEE REMARK 999' 155 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ETP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 54.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.2 M Na/K phosphate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-08-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97950 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X6A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97950 # _reflns.entry_id 3ETP _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.13 _reflns.d_resolution_high 2 _reflns.number_obs 15984 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3ETP _refine.ls_number_reflns_obs 15163 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.11 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 96.31 _refine.ls_R_factor_obs 0.20134 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19833 _refine.ls_R_factor_R_free 0.26320 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 806 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.B_iso_mean 42.247 _refine.aniso_B[1][1] 1.20 _refine.aniso_B[2][2] 1.20 _refine.aniso_B[3][3] -2.40 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 1NUK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.183 _refine.pdbx_overall_ESU_R_Free 0.181 _refine.overall_SU_ML 0.120 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.368 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1503 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 185 _refine_hist.number_atoms_total 1688 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 37.11 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 1544 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.085 1.931 ? 2095 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.148 5.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.820 23.158 ? 76 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.222 15.000 ? 253 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.839 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.176 0.200 ? 220 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 1199 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.539 1.500 ? 933 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.710 2.000 ? 1514 'X-RAY DIFFRACTION' ? r_scbond_it 3.477 3.000 ? 611 'X-RAY DIFFRACTION' ? r_scangle_it 5.568 4.500 ? 581 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.054 _refine_ls_shell.number_reflns_R_work 872 _refine_ls_shell.R_factor_R_work 0.260 _refine_ls_shell.percent_reflns_obs 77.27 _refine_ls_shell.R_factor_R_free 0.357 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3ETP _struct.title 'The crystal structure of the ligand-binding domain of the EphB2 receptor at 2.0 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ETP _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;Eph receptor, tyrosine kinase, Alternative splicing, ATP-binding, Glycoprotein, Kinase, Membrane, Nucleotide-binding, Phosphoprotein, Receptor, Transferase, Transmembrane, Tyrosine-protein kinase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 15 ? ALA A 17 ? THR A 35 ALA A 37 5 ? 3 HELX_P HELX_P2 2 ASP A 84 ? ILE A 88 ? ASP A 104 ILE A 108 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 172 SG ? ? A CYS 70 A CYS 192 1_555 ? ? ? ? ? ? ? 2.112 ? ? disulf2 disulf ? ? A CYS 85 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 105 A CYS 115 1_555 ? ? ? ? ? ? ? 2.196 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 26 A . ? HIS 46 A PRO 27 A ? PRO 47 A 1 1.03 2 PHE 115 A . ? PHE 135 A PRO 116 A ? PRO 136 A 1 -1.68 3 ASN 121 A . ? ASN 141 A PRO 122 A ? PRO 142 A 1 20.53 4 GLY 155 A . ? GLY 175 A PRO 156 A ? PRO 176 A 1 0.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 4 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 8 ? ASP A 13 ? GLU A 28 ASP A 33 A 2 MET A 173 ? ARG A 183 ? MET A 193 ARG A 203 A 3 THR A 43 ? VAL A 49 ? THR A 63 VAL A 69 A 4 GLU A 32 ? TYR A 37 ? GLU A 52 TYR A 57 B 1 GLU A 8 ? ASP A 13 ? GLU A 28 ASP A 33 B 2 MET A 173 ? ARG A 183 ? MET A 193 ARG A 203 B 3 ILE A 74 ? VAL A 82 ? ILE A 94 VAL A 102 B 4 ARG A 143 ? PHE A 154 ? ARG A 163 PHE A 174 B 5 ILE A 135 ? LEU A 140 ? ILE A 155 LEU A 160 C 1 MET A 24 ? HIS A 26 ? MET A 44 HIS A 46 C 2 ASN A 59 ? ARG A 62 ? ASN A 79 ARG A 82 C 3 GLY A 161 ? ASP A 168 ? GLY A 181 ASP A 188 C 4 ILE A 66 ? ARG A 67 ? ILE A 86 ARG A 87 D 1 MET A 24 ? HIS A 26 ? MET A 44 HIS A 46 D 2 ASN A 59 ? ARG A 62 ? ASN A 79 ARG A 82 D 3 GLY A 161 ? ASP A 168 ? GLY A 181 ASP A 188 D 4 THR A 98 ? ALA A 106 ? THR A 118 ALA A 126 D 5 VAL A 124 ? ALA A 130 ? VAL A 144 ALA A 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 11 ? N LEU A 31 O VAL A 180 ? O VAL A 200 A 2 3 O LEU A 175 ? O LEU A 195 N TYR A 47 ? N TYR A 67 A 3 4 O THR A 46 ? O THR A 66 N VAL A 34 ? N VAL A 54 B 1 2 N LEU A 11 ? N LEU A 31 O VAL A 180 ? O VAL A 200 B 2 3 O ARG A 179 ? O ARG A 199 N GLU A 77 ? N GLU A 97 B 3 4 N VAL A 76 ? N VAL A 96 O ARG A 152 ? O ARG A 172 B 4 5 O ILE A 147 ? O ILE A 167 N SER A 136 ? N SER A 156 C 1 2 N HIS A 26 ? N HIS A 46 O TRP A 60 ? O TRP A 80 C 2 3 N ASN A 59 ? N ASN A 79 O ASP A 168 ? O ASP A 188 C 3 4 O PHE A 162 ? O PHE A 182 N ILE A 66 ? N ILE A 86 D 1 2 N HIS A 26 ? N HIS A 46 O TRP A 60 ? O TRP A 80 D 2 3 N ASN A 59 ? N ASN A 79 O ASP A 168 ? O ASP A 188 D 3 4 O ALA A 165 ? O ALA A 185 N TYR A 102 ? N TYR A 122 D 4 5 N PHE A 99 ? N PHE A 119 O ILE A 129 ? O ILE A 149 # _database_PDB_matrix.entry_id 3ETP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ETP _atom_sites.fract_transf_matrix[1][1] 0.018509 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018509 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006353 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 21 21 ALA ALA A . n A 1 2 MET 2 22 22 MET MET A . n A 1 3 ALA 3 23 23 ALA ALA A . n A 1 4 ILE 4 24 24 ILE ILE A . n A 1 5 SER 5 25 25 SER SER A . n A 1 6 ASP 6 26 26 ASP ASP A . n A 1 7 PRO 7 27 27 PRO PRO A . n A 1 8 GLU 8 28 28 GLU GLU A . n A 1 9 GLU 9 29 29 GLU GLU A . n A 1 10 THR 10 30 30 THR THR A . n A 1 11 LEU 11 31 31 LEU LEU A . n A 1 12 MET 12 32 32 MET MET A . n A 1 13 ASP 13 33 33 ASP ASP A . n A 1 14 SER 14 34 34 SER SER A . n A 1 15 THR 15 35 35 THR THR A . n A 1 16 THR 16 36 36 THR THR A . n A 1 17 ALA 17 37 37 ALA ALA A . n A 1 18 THR 18 38 38 THR THR A . n A 1 19 ALA 19 39 39 ALA ALA A . n A 1 20 GLU 20 40 40 GLU GLU A . n A 1 21 LEU 21 41 41 LEU LEU A . n A 1 22 GLY 22 42 42 GLY GLY A . n A 1 23 TRP 23 43 43 TRP TRP A . n A 1 24 MET 24 44 44 MET MET A . n A 1 25 VAL 25 45 45 VAL VAL A . n A 1 26 HIS 26 46 46 HIS HIS A . n A 1 27 PRO 27 47 47 PRO PRO A . n A 1 28 PRO 28 48 48 PRO PRO A . n A 1 29 SER 29 49 49 SER SER A . n A 1 30 GLY 30 50 50 GLY GLY A . n A 1 31 TRP 31 51 51 TRP TRP A . n A 1 32 GLU 32 52 52 GLU GLU A . n A 1 33 GLU 33 53 53 GLU GLU A . n A 1 34 VAL 34 54 54 VAL VAL A . n A 1 35 SER 35 55 55 SER SER A . n A 1 36 GLY 36 56 56 GLY GLY A . n A 1 37 TYR 37 57 57 TYR TYR A . n A 1 38 ASP 38 58 58 ASP ASP A . n A 1 39 GLU 39 59 59 GLU GLU A . n A 1 40 ASN 40 60 60 ASN ASN A . n A 1 41 MET 41 61 61 MET MET A . n A 1 42 ASN 42 62 62 ASN ASN A . n A 1 43 THR 43 63 63 THR THR A . n A 1 44 ILE 44 64 64 ILE ILE A . n A 1 45 ARG 45 65 65 ARG ARG A . n A 1 46 THR 46 66 66 THR THR A . n A 1 47 TYR 47 67 67 TYR TYR A . n A 1 48 GLN 48 68 68 GLN GLN A . n A 1 49 VAL 49 69 69 VAL VAL A . n A 1 50 CYS 50 70 70 CYS CYS A . n A 1 51 ASN 51 71 71 ASN ASN A . n A 1 52 VAL 52 72 72 VAL VAL A . n A 1 53 PHE 53 73 73 PHE PHE A . n A 1 54 GLU 54 74 74 GLU GLU A . n A 1 55 SER 55 75 75 SER SER A . n A 1 56 SER 56 76 76 SER SER A . n A 1 57 GLN 57 77 77 GLN GLN A . n A 1 58 ASN 58 78 78 ASN ASN A . n A 1 59 ASN 59 79 79 ASN ASN A . n A 1 60 TRP 60 80 80 TRP TRP A . n A 1 61 LEU 61 81 81 LEU LEU A . n A 1 62 ARG 62 82 82 ARG ARG A . n A 1 63 THR 63 83 83 THR THR A . n A 1 64 LYS 64 84 84 LYS LYS A . n A 1 65 PHE 65 85 85 PHE PHE A . n A 1 66 ILE 66 86 86 ILE ILE A . n A 1 67 ARG 67 87 87 ARG ARG A . n A 1 68 ARG 68 88 88 ARG ARG A . n A 1 69 ARG 69 89 89 ARG ARG A . n A 1 70 GLY 70 90 90 GLY GLY A . n A 1 71 ALA 71 91 91 ALA ALA A . n A 1 72 HIS 72 92 92 HIS HIS A . n A 1 73 ARG 73 93 93 ARG ARG A . n A 1 74 ILE 74 94 94 ILE ILE A . n A 1 75 HIS 75 95 95 HIS HIS A . n A 1 76 VAL 76 96 96 VAL VAL A . n A 1 77 GLU 77 97 97 GLU GLU A . n A 1 78 MET 78 98 98 MET MET A . n A 1 79 LYS 79 99 99 LYS LYS A . n A 1 80 PHE 80 100 100 PHE PHE A . n A 1 81 SER 81 101 101 SER SER A . n A 1 82 VAL 82 102 102 VAL VAL A . n A 1 83 ARG 83 103 103 ARG ARG A . n A 1 84 ASP 84 104 104 ASP ASP A . n A 1 85 CYS 85 105 105 CYS CYS A . n A 1 86 SER 86 106 106 SER SER A . n A 1 87 SER 87 107 107 SER SER A . n A 1 88 ILE 88 108 108 ILE ILE A . n A 1 89 PRO 89 109 109 PRO PRO A . n A 1 90 SER 90 110 110 SER SER A . n A 1 91 VAL 91 111 111 VAL VAL A . n A 1 92 PRO 92 112 112 PRO PRO A . n A 1 93 GLY 93 113 113 GLY GLY A . n A 1 94 SER 94 114 114 SER SER A . n A 1 95 CYS 95 115 115 CYS CYS A . n A 1 96 LYS 96 116 116 LYS LYS A . n A 1 97 GLU 97 117 117 GLU GLU A . n A 1 98 THR 98 118 118 THR THR A . n A 1 99 PHE 99 119 119 PHE PHE A . n A 1 100 ASN 100 120 120 ASN ASN A . n A 1 101 LEU 101 121 121 LEU LEU A . n A 1 102 TYR 102 122 122 TYR TYR A . n A 1 103 TYR 103 123 123 TYR TYR A . n A 1 104 TYR 104 124 124 TYR TYR A . n A 1 105 GLU 105 125 125 GLU GLU A . n A 1 106 ALA 106 126 126 ALA ALA A . n A 1 107 ASP 107 127 127 ASP ASP A . n A 1 108 PHE 108 128 128 PHE PHE A . n A 1 109 ASP 109 129 129 ASP ASP A . n A 1 110 LEU 110 130 130 LEU LEU A . n A 1 111 ALA 111 131 131 ALA ALA A . n A 1 112 THR 112 132 132 THR THR A . n A 1 113 LYS 113 133 133 LYS LYS A . n A 1 114 THR 114 134 134 THR THR A . n A 1 115 PHE 115 135 135 PHE PHE A . n A 1 116 PRO 116 136 136 PRO PRO A . n A 1 117 ASN 117 137 137 ASN ASN A . n A 1 118 TRP 118 138 138 TRP TRP A . n A 1 119 MET 119 139 139 MET MET A . n A 1 120 GLU 120 140 140 GLU GLU A . n A 1 121 ASN 121 141 141 ASN ASN A . n A 1 122 PRO 122 142 142 PRO PRO A . n A 1 123 TRP 123 143 143 TRP TRP A . n A 1 124 VAL 124 144 144 VAL VAL A . n A 1 125 LYS 125 145 145 LYS LYS A . n A 1 126 VAL 126 146 146 VAL VAL A . n A 1 127 ASP 127 147 147 ASP ASP A . n A 1 128 THR 128 148 148 THR THR A . n A 1 129 ILE 129 149 149 ILE ILE A . n A 1 130 ALA 130 150 150 ALA ALA A . n A 1 131 ALA 131 151 151 ALA ALA A . n A 1 132 ASP 132 152 152 ASP ASP A . n A 1 133 GLU 133 153 153 GLU GLU A . n A 1 134 SER 134 154 154 SER SER A . n A 1 135 ILE 135 155 155 ILE ILE A . n A 1 136 SER 136 156 156 SER SER A . n A 1 137 GLN 137 157 157 GLN GLN A . n A 1 138 VAL 138 158 158 VAL VAL A . n A 1 139 ASP 139 159 159 ASP ASP A . n A 1 140 LEU 140 160 160 LEU LEU A . n A 1 141 GLY 141 161 161 GLY GLY A . n A 1 142 GLY 142 162 162 GLY GLY A . n A 1 143 ARG 143 163 163 ARG ARG A . n A 1 144 VAL 144 164 164 VAL VAL A . n A 1 145 MET 145 165 165 MET MET A . n A 1 146 LYS 146 166 166 LYS LYS A . n A 1 147 ILE 147 167 167 ILE ILE A . n A 1 148 ASN 148 168 168 ASN ASN A . n A 1 149 THR 149 169 169 THR THR A . n A 1 150 GLU 150 170 170 GLU GLU A . n A 1 151 VAL 151 171 171 VAL VAL A . n A 1 152 ARG 152 172 172 ARG ARG A . n A 1 153 SER 153 173 173 SER SER A . n A 1 154 PHE 154 174 174 PHE PHE A . n A 1 155 GLY 155 175 175 GLY GLY A . n A 1 156 PRO 156 176 176 PRO PRO A . n A 1 157 VAL 157 177 177 VAL VAL A . n A 1 158 SER 158 178 178 SER SER A . n A 1 159 ARG 159 179 179 ARG ARG A . n A 1 160 ASN 160 180 180 ASN ASN A . n A 1 161 GLY 161 181 181 GLY GLY A . n A 1 162 PHE 162 182 182 PHE PHE A . n A 1 163 TYR 163 183 183 TYR TYR A . n A 1 164 LEU 164 184 184 LEU LEU A . n A 1 165 ALA 165 185 185 ALA ALA A . n A 1 166 PHE 166 186 186 PHE PHE A . n A 1 167 GLN 167 187 187 GLN GLN A . n A 1 168 ASP 168 188 188 ASP ASP A . n A 1 169 TYR 169 189 189 TYR TYR A . n A 1 170 GLY 170 190 190 GLY GLY A . n A 1 171 GLY 171 191 191 GLY GLY A . n A 1 172 CYS 172 192 192 CYS CYS A . n A 1 173 MET 173 193 193 MET MET A . n A 1 174 SER 174 194 194 SER SER A . n A 1 175 LEU 175 195 195 LEU LEU A . n A 1 176 ILE 176 196 196 ILE ILE A . n A 1 177 ALA 177 197 197 ALA ALA A . n A 1 178 VAL 178 198 198 VAL VAL A . n A 1 179 ARG 179 199 199 ARG ARG A . n A 1 180 VAL 180 200 200 VAL VAL A . n A 1 181 PHE 181 201 201 PHE PHE A . n A 1 182 TYR 182 202 202 TYR TYR A . n A 1 183 ARG 183 203 203 ARG ARG A . n A 1 184 LYS 184 204 204 LYS LYS A . n A 1 185 CYS 185 205 205 CYS CYS A . n A 1 186 PRO 186 206 206 PRO PRO A . n A 1 187 ARG 187 207 207 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 208 1 HOH HOH A . B 2 HOH 2 209 2 HOH HOH A . B 2 HOH 3 210 3 HOH HOH A . B 2 HOH 4 211 4 HOH HOH A . B 2 HOH 5 212 5 HOH HOH A . B 2 HOH 6 213 6 HOH HOH A . B 2 HOH 7 214 7 HOH HOH A . B 2 HOH 8 215 8 HOH HOH A . B 2 HOH 9 216 9 HOH HOH A . B 2 HOH 10 217 10 HOH HOH A . B 2 HOH 11 218 11 HOH HOH A . B 2 HOH 12 219 12 HOH HOH A . B 2 HOH 13 220 13 HOH HOH A . B 2 HOH 14 221 14 HOH HOH A . B 2 HOH 15 222 15 HOH HOH A . B 2 HOH 16 223 16 HOH HOH A . B 2 HOH 17 224 17 HOH HOH A . B 2 HOH 18 225 18 HOH HOH A . B 2 HOH 19 226 19 HOH HOH A . B 2 HOH 20 227 20 HOH HOH A . B 2 HOH 21 228 21 HOH HOH A . B 2 HOH 22 229 22 HOH HOH A . B 2 HOH 23 230 23 HOH HOH A . B 2 HOH 24 231 24 HOH HOH A . B 2 HOH 25 232 25 HOH HOH A . B 2 HOH 26 233 26 HOH HOH A . B 2 HOH 27 234 27 HOH HOH A . B 2 HOH 28 235 28 HOH HOH A . B 2 HOH 29 236 29 HOH HOH A . B 2 HOH 30 237 30 HOH HOH A . B 2 HOH 31 238 31 HOH HOH A . B 2 HOH 32 239 32 HOH HOH A . B 2 HOH 33 240 33 HOH HOH A . B 2 HOH 34 241 34 HOH HOH A . B 2 HOH 35 242 35 HOH HOH A . B 2 HOH 36 243 36 HOH HOH A . B 2 HOH 37 244 37 HOH HOH A . B 2 HOH 38 245 38 HOH HOH A . B 2 HOH 39 246 39 HOH HOH A . B 2 HOH 40 247 40 HOH HOH A . B 2 HOH 41 248 41 HOH HOH A . B 2 HOH 42 249 42 HOH HOH A . B 2 HOH 43 250 43 HOH HOH A . B 2 HOH 44 251 44 HOH HOH A . B 2 HOH 45 252 45 HOH HOH A . B 2 HOH 46 253 46 HOH HOH A . B 2 HOH 47 254 47 HOH HOH A . B 2 HOH 48 255 48 HOH HOH A . B 2 HOH 49 256 49 HOH HOH A . B 2 HOH 50 257 50 HOH HOH A . B 2 HOH 51 258 51 HOH HOH A . B 2 HOH 52 259 52 HOH HOH A . B 2 HOH 53 260 53 HOH HOH A . B 2 HOH 54 261 54 HOH HOH A . B 2 HOH 55 262 55 HOH HOH A . B 2 HOH 56 263 56 HOH HOH A . B 2 HOH 57 264 57 HOH HOH A . B 2 HOH 58 265 58 HOH HOH A . B 2 HOH 59 266 59 HOH HOH A . B 2 HOH 60 267 60 HOH HOH A . B 2 HOH 61 268 61 HOH HOH A . B 2 HOH 62 269 62 HOH HOH A . B 2 HOH 63 270 63 HOH HOH A . B 2 HOH 64 271 64 HOH HOH A . B 2 HOH 65 272 65 HOH HOH A . B 2 HOH 66 273 66 HOH HOH A . B 2 HOH 67 274 67 HOH HOH A . B 2 HOH 68 275 68 HOH HOH A . B 2 HOH 69 276 69 HOH HOH A . B 2 HOH 70 277 70 HOH HOH A . B 2 HOH 71 278 71 HOH HOH A . B 2 HOH 72 279 72 HOH HOH A . B 2 HOH 73 280 73 HOH HOH A . B 2 HOH 74 281 74 HOH HOH A . B 2 HOH 75 282 75 HOH HOH A . B 2 HOH 76 283 76 HOH HOH A . B 2 HOH 77 284 77 HOH HOH A . B 2 HOH 78 285 78 HOH HOH A . B 2 HOH 79 286 79 HOH HOH A . B 2 HOH 80 287 80 HOH HOH A . B 2 HOH 81 288 81 HOH HOH A . B 2 HOH 82 289 82 HOH HOH A . B 2 HOH 83 290 83 HOH HOH A . B 2 HOH 84 291 84 HOH HOH A . B 2 HOH 85 292 85 HOH HOH A . B 2 HOH 86 293 86 HOH HOH A . B 2 HOH 87 294 87 HOH HOH A . B 2 HOH 88 295 88 HOH HOH A . B 2 HOH 89 296 89 HOH HOH A . B 2 HOH 90 297 90 HOH HOH A . B 2 HOH 91 298 91 HOH HOH A . B 2 HOH 92 299 92 HOH HOH A . B 2 HOH 93 300 93 HOH HOH A . B 2 HOH 94 301 94 HOH HOH A . B 2 HOH 95 302 95 HOH HOH A . B 2 HOH 96 303 96 HOH HOH A . B 2 HOH 97 304 97 HOH HOH A . B 2 HOH 98 305 98 HOH HOH A . B 2 HOH 99 306 99 HOH HOH A . B 2 HOH 100 307 100 HOH HOH A . B 2 HOH 101 308 101 HOH HOH A . B 2 HOH 102 309 102 HOH HOH A . B 2 HOH 103 310 103 HOH HOH A . B 2 HOH 104 311 104 HOH HOH A . B 2 HOH 105 312 105 HOH HOH A . B 2 HOH 106 313 106 HOH HOH A . B 2 HOH 107 314 107 HOH HOH A . B 2 HOH 108 315 108 HOH HOH A . B 2 HOH 109 316 109 HOH HOH A . B 2 HOH 110 317 110 HOH HOH A . B 2 HOH 111 318 111 HOH HOH A . B 2 HOH 112 319 112 HOH HOH A . B 2 HOH 113 320 113 HOH HOH A . B 2 HOH 114 321 114 HOH HOH A . B 2 HOH 115 322 115 HOH HOH A . B 2 HOH 116 323 116 HOH HOH A . B 2 HOH 117 324 117 HOH HOH A . B 2 HOH 118 325 118 HOH HOH A . B 2 HOH 119 326 119 HOH HOH A . B 2 HOH 120 327 120 HOH HOH A . B 2 HOH 121 328 121 HOH HOH A . B 2 HOH 122 329 122 HOH HOH A . B 2 HOH 123 330 123 HOH HOH A . B 2 HOH 124 331 124 HOH HOH A . B 2 HOH 125 332 125 HOH HOH A . B 2 HOH 126 333 126 HOH HOH A . B 2 HOH 127 334 127 HOH HOH A . B 2 HOH 128 335 128 HOH HOH A . B 2 HOH 129 336 129 HOH HOH A . B 2 HOH 130 337 130 HOH HOH A . B 2 HOH 131 338 131 HOH HOH A . B 2 HOH 132 339 132 HOH HOH A . B 2 HOH 133 340 133 HOH HOH A . B 2 HOH 134 341 134 HOH HOH A . B 2 HOH 135 342 135 HOH HOH A . B 2 HOH 136 343 136 HOH HOH A . B 2 HOH 137 344 137 HOH HOH A . B 2 HOH 138 345 138 HOH HOH A . B 2 HOH 139 346 139 HOH HOH A . B 2 HOH 140 347 140 HOH HOH A . B 2 HOH 141 348 141 HOH HOH A . B 2 HOH 142 349 142 HOH HOH A . B 2 HOH 143 350 143 HOH HOH A . B 2 HOH 144 351 144 HOH HOH A . B 2 HOH 145 352 145 HOH HOH A . B 2 HOH 146 353 146 HOH HOH A . B 2 HOH 147 354 147 HOH HOH A . B 2 HOH 148 355 148 HOH HOH A . B 2 HOH 149 356 149 HOH HOH A . B 2 HOH 150 357 150 HOH HOH A . B 2 HOH 151 358 151 HOH HOH A . B 2 HOH 152 359 152 HOH HOH A . B 2 HOH 153 360 153 HOH HOH A . B 2 HOH 154 361 154 HOH HOH A . B 2 HOH 155 362 155 HOH HOH A . B 2 HOH 156 363 156 HOH HOH A . B 2 HOH 157 364 157 HOH HOH A . B 2 HOH 158 365 158 HOH HOH A . B 2 HOH 159 366 159 HOH HOH A . B 2 HOH 160 367 160 HOH HOH A . B 2 HOH 161 368 161 HOH HOH A . B 2 HOH 162 369 162 HOH HOH A . B 2 HOH 163 370 163 HOH HOH A . B 2 HOH 164 371 164 HOH HOH A . B 2 HOH 165 372 165 HOH HOH A . B 2 HOH 166 373 166 HOH HOH A . B 2 HOH 167 374 167 HOH HOH A . B 2 HOH 168 375 168 HOH HOH A . B 2 HOH 169 376 169 HOH HOH A . B 2 HOH 170 377 170 HOH HOH A . B 2 HOH 171 378 171 HOH HOH A . B 2 HOH 172 379 172 HOH HOH A . B 2 HOH 173 380 173 HOH HOH A . B 2 HOH 174 381 174 HOH HOH A . B 2 HOH 175 382 175 HOH HOH A . B 2 HOH 176 383 176 HOH HOH A . B 2 HOH 177 384 177 HOH HOH A . B 2 HOH 178 385 178 HOH HOH A . B 2 HOH 179 386 179 HOH HOH A . B 2 HOH 180 387 180 HOH HOH A . B 2 HOH 181 388 181 HOH HOH A . B 2 HOH 182 389 182 HOH HOH A . B 2 HOH 183 390 183 HOH HOH A . B 2 HOH 184 391 184 HOH HOH A . B 2 HOH 185 392 185 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-09-06 5 'Structure model' 1 4 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif 7 5 'Structure model' pdbx_database_related # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_pdbx_database_related.db_name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.4.0077 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3ETP _pdbx_entry_details.sequence_details ;ACCORDING TO THE AUTHORS, THE ELECTRON DENSITY OF THIS WELL ORDERED RESIDUE DOES NOT FIT PHE. IT IS PROBABLY A CLONING ARTEFACT. THE ORIGINAL PLASMID WAS SEQUENCED AND HAD EITHER TTC (PHE) OR ATC (ILE) AT THIS POSITION. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 213 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 369 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.95 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 58 ? ? -86.24 -159.78 2 1 CYS A 70 ? ? -152.65 57.09 3 1 ASN A 71 ? ? -93.88 53.45 4 1 ASN A 78 ? ? -155.81 80.69 5 1 ARG A 89 ? ? 39.47 52.35 6 1 ASN A 141 ? ? 60.25 88.65 7 1 SER A 156 ? ? -114.20 -164.41 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1NUK _pdbx_initial_refinement_model.details 'PDB entry 1NUK' #