HEADER HYDROLASE 13-OCT-08 3EVY TITLE CRYSTAL STRUCTURE OF A FRAGMENT OF A PUTATIVE TYPE I RESTRICTION TITLE 2 ENZYME R PROTEIN FROM BACTEROIDES FRAGILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TYPE I RESTRICTION ENZYME R PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 656-884; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS NCTC 9343; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: ATCC 25285; SOURCE 5 GENE: BF1836, HSDR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,M.GILMORE,K.T.BAIN,S.MILLER,P.SAMPATHKUMAR,S.WASSERMAN, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 27-DEC-23 3EVY 1 REMARK REVDAT 5 10-FEB-21 3EVY 1 AUTHOR JRNL SEQADV REVDAT 4 14-NOV-18 3EVY 1 AUTHOR REVDAT 3 25-OCT-17 3EVY 1 REMARK REVDAT 2 24-FEB-09 3EVY 1 VERSN REVDAT 1 21-OCT-08 3EVY 0 JRNL AUTH J.B.BONANNO,M.GILMORE,K.T.BAIN,S.MILLER,P.SAMPATHKUMAR, JRNL AUTH 2 S.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A FRAGMENT OF A PUTATIVE TYPE I JRNL TITL 2 RESTRICTION ENZYME R PROTEIN FROM BACTEROIDES FRAGILIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17721 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 900 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1192 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.4120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.91000 REMARK 3 B22 (A**2) : -0.85000 REMARK 3 B33 (A**2) : -2.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.140 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.984 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1428 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1915 ; 1.695 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 165 ; 5.040 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;27.750 ;23.659 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 266 ;16.404 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;20.850 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 200 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1100 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 833 ; 1.245 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1335 ; 2.268 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 595 ; 3.800 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 580 ; 5.859 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EVY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17791 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 45.314 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : 0.11400 REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : 0.59000 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200MM POTASSIUM SULFATE, REMARK 280 PH 7.0, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.41700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.92850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.92850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.41700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROBABLE MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 653 REMARK 465 SER A 654 REMARK 465 LEU A 655 REMARK 465 SER A 656 REMARK 465 SER A 657 REMARK 465 GLU A 658 REMARK 465 VAL A 659 REMARK 465 VAL A 660 REMARK 465 LEU A 661 REMARK 465 ASN A 745 REMARK 465 GLU A 746 REMARK 465 PHE A 747 REMARK 465 ALA A 748 REMARK 465 ILE A 749 REMARK 465 THR A 750 REMARK 465 SER A 751 REMARK 465 GLU A 752 REMARK 465 LYS A 753 REMARK 465 GLU A 754 REMARK 465 ASP A 755 REMARK 465 ALA A 756 REMARK 465 GLU A 757 REMARK 465 SER A 758 REMARK 465 ILE A 759 REMARK 465 LEU A 760 REMARK 465 GLN A 761 REMARK 465 ASP A 762 REMARK 465 ILE A 763 REMARK 465 ASP A 764 REMARK 465 PHE A 765 REMARK 465 GLU A 766 REMARK 465 LEU A 767 REMARK 465 GLU A 768 REMARK 465 LEU A 769 REMARK 465 VAL A 770 REMARK 465 HIS A 771 REMARK 465 ARG A 772 REMARK 465 ASP A 773 REMARK 465 ILE A 774 REMARK 465 ILE A 775 REMARK 465 ASN A 776 REMARK 465 VAL A 777 REMARK 465 MET A 778 REMARK 465 TYR A 779 REMARK 465 ILE A 780 REMARK 465 LEU A 781 REMARK 465 ALA A 782 REMARK 465 LEU A 783 REMARK 465 LEU A 784 REMARK 465 GLN A 785 REMARK 465 ASP A 786 REMARK 465 LEU A 787 REMARK 465 LYS A 788 REMARK 465 PRO A 789 REMARK 465 GLU A 790 REMARK 465 SER A 791 REMARK 465 SER A 792 REMARK 465 SER A 793 REMARK 465 TYR A 794 REMARK 465 PRO A 795 REMARK 465 LYS A 796 REMARK 465 ASP A 797 REMARK 465 ARG A 798 REMARK 465 LYS A 799 REMARK 465 ALA A 800 REMARK 465 VAL A 801 REMARK 465 LEU A 802 REMARK 465 ASP A 803 REMARK 465 THR A 804 REMARK 465 MET A 805 REMARK 465 ASP A 806 REMARK 465 SER A 807 REMARK 465 ASN A 808 REMARK 465 PRO A 809 REMARK 465 GLU A 810 REMARK 465 LEU A 811 REMARK 465 ARG A 812 REMARK 465 SER A 813 REMARK 465 LYS A 814 REMARK 465 ILE A 815 REMARK 465 ALA A 816 REMARK 465 LEU A 817 REMARK 465 ILE A 818 REMARK 465 ASP A 819 REMARK 465 ASN A 820 REMARK 465 PHE A 821 REMARK 465 ILE A 822 REMARK 465 LYS A 823 REMARK 465 LEU A 824 REMARK 465 HIS A 825 REMARK 465 ILE A 826 REMARK 465 ASP A 827 REMARK 465 GLY A 828 REMARK 465 ARG A 829 REMARK 465 GLN A 830 REMARK 465 SER A 831 REMARK 465 ASN A 832 REMARK 465 ASP A 833 REMARK 465 LEU A 834 REMARK 465 PRO A 835 REMARK 465 ALA A 836 REMARK 465 ASP A 837 REMARK 465 MET A 838 REMARK 465 GLU A 839 REMARK 465 SER A 840 REMARK 465 ASP A 841 REMARK 465 LEU A 842 REMARK 465 ASP A 843 REMARK 465 LYS A 844 REMARK 465 TYR A 845 REMARK 465 ILE A 846 REMARK 465 ALA A 847 REMARK 465 THR A 848 REMARK 465 GLN A 849 REMARK 465 LYS A 850 REMARK 465 ALA A 851 REMARK 465 ILE A 852 REMARK 465 ALA A 853 REMARK 465 ILE A 854 REMARK 465 GLU A 855 REMARK 465 GLN A 856 REMARK 465 VAL A 857 REMARK 465 ALA A 858 REMARK 465 THR A 859 REMARK 465 GLU A 860 REMARK 465 GLU A 861 REMARK 465 GLY A 862 REMARK 465 ILE A 863 REMARK 465 ASP A 864 REMARK 465 SER A 865 REMARK 465 THR A 866 REMARK 465 LEU A 867 REMARK 465 LEU A 868 REMARK 465 HIS A 869 REMARK 465 GLU A 870 REMARK 465 TYR A 871 REMARK 465 ILE A 872 REMARK 465 SER A 873 REMARK 465 GLU A 874 REMARK 465 TYR A 875 REMARK 465 GLU A 876 REMARK 465 TYR A 877 REMARK 465 LEU A 878 REMARK 465 GLY A 879 REMARK 465 LYS A 880 REMARK 465 PRO A 881 REMARK 465 LYS A 882 REMARK 465 ASN A 883 REMARK 465 GLU A 884 REMARK 465 GLY A 885 REMARK 465 HIS A 886 REMARK 465 HIS A 887 REMARK 465 HIS A 888 REMARK 465 HIS A 889 REMARK 465 HIS A 890 REMARK 465 HIS A 891 REMARK 465 MET B 653 REMARK 465 SER B 654 REMARK 465 LEU B 655 REMARK 465 SER B 656 REMARK 465 SER B 657 REMARK 465 GLU B 658 REMARK 465 VAL B 659 REMARK 465 VAL B 660 REMARK 465 ASN B 745 REMARK 465 GLU B 746 REMARK 465 PHE B 747 REMARK 465 ALA B 748 REMARK 465 ILE B 749 REMARK 465 THR B 750 REMARK 465 SER B 751 REMARK 465 GLU B 752 REMARK 465 LYS B 753 REMARK 465 GLU B 754 REMARK 465 ASP B 755 REMARK 465 ALA B 756 REMARK 465 GLU B 757 REMARK 465 SER B 758 REMARK 465 ILE B 759 REMARK 465 LEU B 760 REMARK 465 GLN B 761 REMARK 465 ASP B 762 REMARK 465 ILE B 763 REMARK 465 ASP B 764 REMARK 465 PHE B 765 REMARK 465 GLU B 766 REMARK 465 LEU B 767 REMARK 465 GLU B 768 REMARK 465 LEU B 769 REMARK 465 VAL B 770 REMARK 465 HIS B 771 REMARK 465 ARG B 772 REMARK 465 ASP B 773 REMARK 465 ILE B 774 REMARK 465 ILE B 775 REMARK 465 ASN B 776 REMARK 465 VAL B 777 REMARK 465 MET B 778 REMARK 465 TYR B 779 REMARK 465 ILE B 780 REMARK 465 LEU B 781 REMARK 465 ALA B 782 REMARK 465 LEU B 783 REMARK 465 LEU B 784 REMARK 465 GLN B 785 REMARK 465 ASP B 786 REMARK 465 LEU B 787 REMARK 465 LYS B 788 REMARK 465 PRO B 789 REMARK 465 GLU B 790 REMARK 465 SER B 791 REMARK 465 SER B 792 REMARK 465 SER B 793 REMARK 465 TYR B 794 REMARK 465 PRO B 795 REMARK 465 LYS B 796 REMARK 465 ASP B 797 REMARK 465 ARG B 798 REMARK 465 LYS B 799 REMARK 465 ALA B 800 REMARK 465 VAL B 801 REMARK 465 LEU B 802 REMARK 465 ASP B 803 REMARK 465 THR B 804 REMARK 465 MET B 805 REMARK 465 ASP B 806 REMARK 465 SER B 807 REMARK 465 ASN B 808 REMARK 465 PRO B 809 REMARK 465 GLU B 810 REMARK 465 LEU B 811 REMARK 465 ARG B 812 REMARK 465 SER B 813 REMARK 465 LYS B 814 REMARK 465 ILE B 815 REMARK 465 ALA B 816 REMARK 465 LEU B 817 REMARK 465 ILE B 818 REMARK 465 ASP B 819 REMARK 465 ASN B 820 REMARK 465 PHE B 821 REMARK 465 ILE B 822 REMARK 465 LYS B 823 REMARK 465 LEU B 824 REMARK 465 HIS B 825 REMARK 465 ILE B 826 REMARK 465 ASP B 827 REMARK 465 GLY B 828 REMARK 465 ARG B 829 REMARK 465 GLN B 830 REMARK 465 SER B 831 REMARK 465 ASN B 832 REMARK 465 ASP B 833 REMARK 465 LEU B 834 REMARK 465 PRO B 835 REMARK 465 ALA B 836 REMARK 465 ASP B 837 REMARK 465 MET B 838 REMARK 465 GLU B 839 REMARK 465 SER B 840 REMARK 465 ASP B 841 REMARK 465 LEU B 842 REMARK 465 ASP B 843 REMARK 465 LYS B 844 REMARK 465 TYR B 845 REMARK 465 ILE B 846 REMARK 465 ALA B 847 REMARK 465 THR B 848 REMARK 465 GLN B 849 REMARK 465 LYS B 850 REMARK 465 ALA B 851 REMARK 465 ILE B 852 REMARK 465 ALA B 853 REMARK 465 ILE B 854 REMARK 465 GLU B 855 REMARK 465 GLN B 856 REMARK 465 VAL B 857 REMARK 465 ALA B 858 REMARK 465 THR B 859 REMARK 465 GLU B 860 REMARK 465 GLU B 861 REMARK 465 GLY B 862 REMARK 465 ILE B 863 REMARK 465 ASP B 864 REMARK 465 SER B 865 REMARK 465 THR B 866 REMARK 465 LEU B 867 REMARK 465 LEU B 868 REMARK 465 HIS B 869 REMARK 465 GLU B 870 REMARK 465 TYR B 871 REMARK 465 ILE B 872 REMARK 465 SER B 873 REMARK 465 GLU B 874 REMARK 465 TYR B 875 REMARK 465 GLU B 876 REMARK 465 TYR B 877 REMARK 465 LEU B 878 REMARK 465 GLY B 879 REMARK 465 LYS B 880 REMARK 465 PRO B 881 REMARK 465 LYS B 882 REMARK 465 ASN B 883 REMARK 465 GLU B 884 REMARK 465 GLY B 885 REMARK 465 HIS B 886 REMARK 465 HIS B 887 REMARK 465 HIS B 888 REMARK 465 HIS B 889 REMARK 465 HIS B 890 REMARK 465 HIS B 891 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 663 CG CD CE NZ REMARK 470 LYS B 667 CG CD CE NZ REMARK 470 LYS B 716 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 724 CD GLU A 724 OE2 0.077 REMARK 500 GLU B 729 CG GLU B 729 CD 0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 728 118.60 78.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10357N RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHOR STATE THAT IT IS POSSIBLE THAT WHAT CRYSTALLIZED WAS A REMARK 999 PROTEOLYTIC FRAGMENT. THE MS DID NOT INDICATE A FRAGMENT OF THE REMARK 999 APPROXIMATE SIZE OF THE OBSERVED PORTION SO IT IS POSSIBLE REMARK 999 FRAGMENTATION OCCURRED DURING THE CRYSTALLIZATION EXPERIMENT. REMARK 999 THEREFORE, THE WHOLE SEQUENCE IS LEFT IN THE RECORD. DBREF 3EVY A 656 884 UNP Q5LEB7 Q5LEB7_BACFN 656 884 DBREF 3EVY B 656 884 UNP Q5LEB7 Q5LEB7_BACFN 656 884 SEQADV 3EVY MET A 653 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY SER A 654 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY LEU A 655 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY GLY A 885 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS A 886 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS A 887 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS A 888 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS A 889 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS A 890 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS A 891 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY MET B 653 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY SER B 654 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY LEU B 655 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY GLY B 885 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS B 886 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS B 887 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS B 888 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS B 889 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS B 890 UNP Q5LEB7 EXPRESSION TAG SEQADV 3EVY HIS B 891 UNP Q5LEB7 EXPRESSION TAG SEQRES 1 A 239 MET SER LEU SER SER GLU VAL VAL LEU MET LYS PRO TYR SEQRES 2 A 239 GLU LYS LEU VAL GLU ARG PHE ASN GLU MET ALA ALA GLU SEQRES 3 A 239 PHE LEU SER TYR PHE PRO THR VAL LYS SER VAL GLY ASN SEQRES 4 A 239 LEU GLU SER GLU LEU ASP LYS ARG ARG PHE VAL ILE LEU SEQRES 5 A 239 PHE ARG ALA MET LEU ARG LEU ARG ASN GLU VAL LYS GLY SEQRES 6 A 239 TYR ASN GLU PHE ASP ALA GLU ASP LEU THR ILE GLU GLU SEQRES 7 A 239 GLN ARG PHE ALA ASP TYR GLN SER LYS TYR LEU ASP MET SEQRES 8 A 239 SER ASN GLU PHE ALA ILE THR SER GLU LYS GLU ASP ALA SEQRES 9 A 239 GLU SER ILE LEU GLN ASP ILE ASP PHE GLU LEU GLU LEU SEQRES 10 A 239 VAL HIS ARG ASP ILE ILE ASN VAL MET TYR ILE LEU ALA SEQRES 11 A 239 LEU LEU GLN ASP LEU LYS PRO GLU SER SER SER TYR PRO SEQRES 12 A 239 LYS ASP ARG LYS ALA VAL LEU ASP THR MET ASP SER ASN SEQRES 13 A 239 PRO GLU LEU ARG SER LYS ILE ALA LEU ILE ASP ASN PHE SEQRES 14 A 239 ILE LYS LEU HIS ILE ASP GLY ARG GLN SER ASN ASP LEU SEQRES 15 A 239 PRO ALA ASP MET GLU SER ASP LEU ASP LYS TYR ILE ALA SEQRES 16 A 239 THR GLN LYS ALA ILE ALA ILE GLU GLN VAL ALA THR GLU SEQRES 17 A 239 GLU GLY ILE ASP SER THR LEU LEU HIS GLU TYR ILE SER SEQRES 18 A 239 GLU TYR GLU TYR LEU GLY LYS PRO LYS ASN GLU GLY HIS SEQRES 19 A 239 HIS HIS HIS HIS HIS SEQRES 1 B 239 MET SER LEU SER SER GLU VAL VAL LEU MET LYS PRO TYR SEQRES 2 B 239 GLU LYS LEU VAL GLU ARG PHE ASN GLU MET ALA ALA GLU SEQRES 3 B 239 PHE LEU SER TYR PHE PRO THR VAL LYS SER VAL GLY ASN SEQRES 4 B 239 LEU GLU SER GLU LEU ASP LYS ARG ARG PHE VAL ILE LEU SEQRES 5 B 239 PHE ARG ALA MET LEU ARG LEU ARG ASN GLU VAL LYS GLY SEQRES 6 B 239 TYR ASN GLU PHE ASP ALA GLU ASP LEU THR ILE GLU GLU SEQRES 7 B 239 GLN ARG PHE ALA ASP TYR GLN SER LYS TYR LEU ASP MET SEQRES 8 B 239 SER ASN GLU PHE ALA ILE THR SER GLU LYS GLU ASP ALA SEQRES 9 B 239 GLU SER ILE LEU GLN ASP ILE ASP PHE GLU LEU GLU LEU SEQRES 10 B 239 VAL HIS ARG ASP ILE ILE ASN VAL MET TYR ILE LEU ALA SEQRES 11 B 239 LEU LEU GLN ASP LEU LYS PRO GLU SER SER SER TYR PRO SEQRES 12 B 239 LYS ASP ARG LYS ALA VAL LEU ASP THR MET ASP SER ASN SEQRES 13 B 239 PRO GLU LEU ARG SER LYS ILE ALA LEU ILE ASP ASN PHE SEQRES 14 B 239 ILE LYS LEU HIS ILE ASP GLY ARG GLN SER ASN ASP LEU SEQRES 15 B 239 PRO ALA ASP MET GLU SER ASP LEU ASP LYS TYR ILE ALA SEQRES 16 B 239 THR GLN LYS ALA ILE ALA ILE GLU GLN VAL ALA THR GLU SEQRES 17 B 239 GLU GLY ILE ASP SER THR LEU LEU HIS GLU TYR ILE SER SEQRES 18 B 239 GLU TYR GLU TYR LEU GLY LYS PRO LYS ASN GLU GLY HIS SEQRES 19 B 239 HIS HIS HIS HIS HIS FORMUL 3 HOH *109(H2 O) HELIX 1 1 LYS A 663 PHE A 683 1 21 HELIX 2 2 THR A 685 ASN A 691 1 7 HELIX 3 3 SER A 694 LYS A 716 1 23 HELIX 4 4 ASP A 722 LEU A 726 5 5 HELIX 5 5 GLU A 729 SER A 744 1 16 HELIX 6 6 LYS B 663 PHE B 683 1 21 HELIX 7 7 THR B 685 ASN B 691 1 7 HELIX 8 8 SER B 694 GLY B 717 1 24 HELIX 9 9 ASP B 722 LEU B 726 5 5 HELIX 10 10 GLU B 729 ASP B 742 1 14 CRYST1 54.834 56.470 75.857 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018237 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017709 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013183 0.00000