HEADER    LYASE                                   16-OCT-08   3EX4              
TITLE     HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN COMPLEX WITH BMP     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: OROTIDINE-5'-PHOSPHATE DECARBOXYLASE;                      
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 224-480;                                      
COMPND   5 SYNONYM: OMPDECASE;                                                  
COMPND   6 EC: 4.1.1.23;                                                        
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_TAXID: 9606;                                                
SOURCE   4 GENE: UMPS;                                                          
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3);                             
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PETM-30                                   
KEYWDS    DECARBOXYLASE, TIM BARREL, UNUSUAL CATALYSIS, ALTERNATIVE SPLICING,   
KEYWDS   2 DISEASE MUTATION, GLYCOSYLTRANSFERASE, LYASE, MULTIFUNCTIONAL        
KEYWDS   3 ENZYME, POLYMORPHISM, PYRIMIDINE BIOSYNTHESIS, TRANSFERASE           
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    D.HEINRICH,U.DIEDERICHSEN,M.RUDOLPH                                   
REVDAT   4   27-DEC-23 3EX4    1       REMARK SEQADV                            
REVDAT   3   25-OCT-17 3EX4    1       REMARK                                   
REVDAT   2   15-DEC-09 3EX4    1       JRNL                                     
REVDAT   1   07-APR-09 3EX4    0                                                
JRNL        AUTH   D.HEINRICH,U.DIEDERICHSEN,M.G.RUDOLPH                        
JRNL        TITL   LYS314 IS A NUCLEOPHILE IN NON-CLASSICAL REACTIONS OF        
JRNL        TITL 2 OROTIDINE-5'-MONOPHOSPHATE DECARBOXYLASE                     
JRNL        REF    CHEMISTRY                     V.  15  6619 2009              
JRNL        REFN                   ISSN 0947-6539                               
JRNL        PMID   19472232                                                     
JRNL        DOI    10.1002/CHEM.200900397                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.24 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.4.0077                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.24                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 38.66                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.5                           
REMARK   3   NUMBER OF REFLECTIONS             : 73733                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.119                           
REMARK   3   R VALUE            (WORKING SET) : 0.119                           
REMARK   3   FREE R VALUE                     : 0.135                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 3928                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.24                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.28                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 4459                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 81.58                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2460                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 245                          
REMARK   3   BIN FREE R VALUE                    : 0.2580                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1966                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 22                                      
REMARK   3   SOLVENT ATOMS            : 345                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 9.62                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.17000                                              
REMARK   3    B22 (A**2) : -0.16000                                             
REMARK   3    B33 (A**2) : -0.01000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.033         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.031         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.019         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.984         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.981                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.978                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2176 ; 0.014 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  1489 ; 0.002 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  2974 ; 1.607 ; 2.014       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  3670 ; 3.184 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   303 ; 5.947 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):    90 ;31.723 ;23.667       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   407 ;12.932 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    16 ;14.111 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   346 ; 0.110 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2439 ; 0.008 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):   433 ; 0.003 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1346 ; 1.438 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):   554 ; 0.714 ; 1.500       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  2182 ; 2.187 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   830 ; 3.230 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   770 ; 4.939 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  3665 ; 1.523 ; 3.000       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):   345 ; 7.292 ; 3.000       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  3607 ; 3.017 ; 3.000       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3EX4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-08.                  
REMARK 100 THE DEPOSITION ID IS D_1000049876.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 24-MAY-08                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X10SA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0000                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 225 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : SADABS                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 78072                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.240                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 44.700                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.9                               
REMARK 200  DATA REDUNDANCY                : 6.100                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.07500                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 11.8000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.24                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.26                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 47.1                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.80                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.35900                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.600                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: COMO                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 50.36                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.0, 1.8 M             
REMARK 280  (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 300.0K        
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -X,Y,-Z+1/2                                             
REMARK 290       4555   X,-Y,-Z                                                 
REMARK 290       5555   X+1/2,Y+1/2,Z                                           
REMARK 290       6555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       7555   -X+1/2,Y+1/2,-Z+1/2                                     
REMARK 290       8555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       31.03000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       31.03000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       38.66000            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       58.45000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000       38.66000            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       58.45000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       31.03000            
REMARK 290   SMTRY1   7 -1.000000  0.000000  0.000000       38.66000            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       58.45000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       31.03000            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000       38.66000            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000       58.45000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3700 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 19010 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.4 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000       62.06000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 495  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A 816  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   221                                                      
REMARK 465     ALA A   222                                                      
REMARK 465     VAL A   480                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   682     O    HOH A   782              2.00            
REMARK 500   O    HOH A   801     O    HOH A   824              2.02            
REMARK 500   O    HOH A   634     O    HOH A   824              2.12            
REMARK 500   O    HOH A   714     O    HOH A   731              2.13            
REMARK 500   O    HOH A   656     O    HOH A   711              2.15            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 477   NE  -  CZ  -  NH2 ANGL. DEV. =   3.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLU A 306       76.35     66.10                                   
REMARK 500    ALA A 316       34.50   -160.85                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMP A 481                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3EWU   RELATED DB: PDB                                   
REMARK 900 D312N MUTANT OF HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN     
REMARK 900 COMPLEX WITH 6-ACETYL-UMP, COVALENT ADDUCT                           
REMARK 900 RELATED ID: 3EWW   RELATED DB: PDB                                   
REMARK 900 D312N MUTANT OF HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN     
REMARK 900 COMPLEX WITH 6-CYANO-UMP, COVALENT ADDUCT                            
REMARK 900 RELATED ID: 3EWX   RELATED DB: PDB                                   
REMARK 900 K314A MUTANT OF HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN     
REMARK 900 COMPLEX WITH 6-AZIDO-UMP, DEGRADED TO BMP                            
REMARK 900 RELATED ID: 3EWY   RELATED DB: PDB                                   
REMARK 900 K314A MUTANT OF HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE        
REMARK 900 SOAKED WITH OMP, DECARBOXYLATED TO UMP                               
REMARK 900 RELATED ID: 3EWZ   RELATED DB: PDB                                   
REMARK 900 HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN COMPLEX WITH 5-     
REMARK 900 CYANO-UMP                                                            
REMARK 900 RELATED ID: 3EX0   RELATED DB: PDB                                   
REMARK 900 HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN COMPLEX WITH 6-     
REMARK 900 ACETYL-UMP                                                           
REMARK 900 RELATED ID: 3EX1   RELATED DB: PDB                                   
REMARK 900 HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE SOAKED WITH 6-CYANO-   
REMARK 900 UMP, CONVERTED TO UMP                                                
REMARK 900 RELATED ID: 3EX2   RELATED DB: PDB                                   
REMARK 900 HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN COMPLEX WITH 6-     
REMARK 900 CYANO-UMP                                                            
REMARK 900 RELATED ID: 3EX3   RELATED DB: PDB                                   
REMARK 900 HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN COMPLEX WITH 6-     
REMARK 900 AZIDO-UMP, COVALENT ADDUCT                                           
REMARK 900 RELATED ID: 3EX5   RELATED DB: PDB                                   
REMARK 900 HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN COMPLEX WITH 6-     
REMARK 900 MERCAPTO-UMP                                                         
REMARK 900 RELATED ID: 3EX6   RELATED DB: PDB                                   
REMARK 900 D312N MUTANT OF HUMAN OROTIDYL-5'-MONOPHOSPHATE DECARBOXYLASE IN     
REMARK 900 COMPLEX WITH 6-AZIDO-UMP, COVALENT ADDUCT                            
DBREF  3EX4 A  224   480  UNP    P11172   PYR5_HUMAN     224    480             
SEQADV 3EX4 GLY A  221  UNP  P11172              EXPRESSION TAG                 
SEQADV 3EX4 ALA A  222  UNP  P11172              EXPRESSION TAG                 
SEQADV 3EX4 MET A  223  UNP  P11172              EXPRESSION TAG                 
SEQRES   1 A  260  GLY ALA MET GLU LEU SER PHE GLY ALA ARG ALA GLU LEU          
SEQRES   2 A  260  PRO ARG ILE HIS PRO VAL ALA SER LYS LEU LEU ARG LEU          
SEQRES   3 A  260  MET GLN LYS LYS GLU THR ASN LEU CYS LEU SER ALA ASP          
SEQRES   4 A  260  VAL SER LEU ALA ARG GLU LEU LEU GLN LEU ALA ASP ALA          
SEQRES   5 A  260  LEU GLY PRO SER ILE CYS MET LEU LYS THR HIS VAL ASP          
SEQRES   6 A  260  ILE LEU ASN ASP PHE THR LEU ASP VAL MET LYS GLU LEU          
SEQRES   7 A  260  ILE THR LEU ALA LYS CYS HIS GLU PHE LEU ILE PHE GLU          
SEQRES   8 A  260  ASP ARG LYS PHE ALA ASP ILE GLY ASN THR VAL LYS LYS          
SEQRES   9 A  260  GLN TYR GLU GLY GLY ILE PHE LYS ILE ALA SER TRP ALA          
SEQRES  10 A  260  ASP LEU VAL ASN ALA HIS VAL VAL PRO GLY SER GLY VAL          
SEQRES  11 A  260  VAL LYS GLY LEU GLN GLU VAL GLY LEU PRO LEU HIS ARG          
SEQRES  12 A  260  GLY CYS LEU LEU ILE ALA GLU MET SER SER THR GLY SER          
SEQRES  13 A  260  LEU ALA THR GLY ASP TYR THR ARG ALA ALA VAL ARG MET          
SEQRES  14 A  260  ALA GLU GLU HIS SER GLU PHE VAL VAL GLY PHE ILE SER          
SEQRES  15 A  260  GLY SER ARG VAL SER MET LYS PRO GLU PHE LEU HIS LEU          
SEQRES  16 A  260  THR PRO GLY VAL GLN LEU GLU ALA GLY GLY ASP ASN LEU          
SEQRES  17 A  260  GLY GLN GLN TYR ASN SER PRO GLN GLU VAL ILE GLY LYS          
SEQRES  18 A  260  ARG GLY SER ASP ILE ILE ILE VAL GLY ARG GLY ILE ILE          
SEQRES  19 A  260  SER ALA ALA ASP ARG LEU GLU ALA ALA GLU MET TYR ARG          
SEQRES  20 A  260  LYS ALA ALA TRP GLU ALA TYR LEU SER ARG LEU GLY VAL          
HET    BMP  A 481      22                                                       
HETNAM     BMP 6-HYDROXYURIDINE-5'-PHOSPHATE                                    
FORMUL   2  BMP    C9 H13 N2 O10 P                                              
FORMUL   3  HOH   *345(H2 O)                                                    
HELIX    1   1 SER A  226  ALA A  231  1                                   6    
HELIX    2   2 HIS A  237  GLU A  251  1                                  15    
HELIX    3   3 LEU A  262  GLY A  274  1                                  13    
HELIX    4   4 PRO A  275  ILE A  277  5                                   3    
HELIX    5   5 HIS A  283  LEU A  287  5                                   5    
HELIX    6   6 THR A  291  GLU A  306  1                                  16    
HELIX    7   7 ILE A  318  GLY A  328  1                                  11    
HELIX    8   8 LYS A  332  ALA A  337  1                                   6    
HELIX    9   9 SER A  348  LEU A  359  1                                  12    
HELIX   10  10 THR A  379  HIS A  393  1                                  15    
HELIX   11  11 SER A  434  LYS A  441  1                                   8    
HELIX   12  12 GLY A  450  SER A  455  1                                   6    
HELIX   13  13 ASP A  458  GLY A  479  1                                  22    
SHEET    1   A 9 LEU A 254  SER A 257  0                                        
SHEET    2   A 9 MET A 279  THR A 282  1  O  LYS A 281   N  LEU A 256           
SHEET    3   A 9 LEU A 308  PHE A 315  1  O  ASP A 312   N  THR A 282           
SHEET    4   A 9 LEU A 339  HIS A 343  1  O  HIS A 343   N  PHE A 315           
SHEET    5   A 9 GLY A 364  ILE A 368  1  O  ILE A 368   N  ALA A 342           
SHEET    6   A 9 VAL A 397  ILE A 401  1  O  VAL A 398   N  CYS A 365           
SHEET    7   A 9 LEU A 413  THR A 416  1  O  LEU A 413   N  PHE A 400           
SHEET    8   A 9 ILE A 446  VAL A 449  1  O  ILE A 446   N  THR A 416           
SHEET    9   A 9 LEU A 254  SER A 257  1  N  CYS A 255   O  ILE A 447           
SITE     1 AC1 21 SER A 257  ASP A 259  LYS A 281  HIS A 283                    
SITE     2 AC1 21 ASP A 312  LYS A 314  ASP A 317  ILE A 318                    
SITE     3 AC1 21 THR A 321  MET A 371  SER A 372  PRO A 417                    
SITE     4 AC1 21 GLN A 430  TYR A 432  GLY A 450  ARG A 451                    
SITE     5 AC1 21 HOH A 483  HOH A 484  HOH A 494  HOH A 498                    
SITE     6 AC1 21 HOH A 517                                                     
CRYST1   77.320  116.900   62.060  90.00  90.00  90.00 C 2 2 21      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.012933  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.008554  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.016113        0.00000