HEADER TRANSCRIPTION/DNA 16-OCT-08 3EXJ TITLE CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOUSE P53 CORE DOMAIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(P*DGP*DAP*DGP*DCP*DAP*DTP*DGP*DCP*DTP*DCP*DA)-3'; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: P53 CONSENSUS SEQUENCE; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 5'-D(*DTP*DTP*DGP*DAP*DGP*DCP*DAP*DTP*DGP*DCP*DTP*DC)-3'; COMPND 12 CHAIN: D; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: P53 CONSENSUS SEQUENCE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES KEYWDS PROTEIN-DNA COMPLEX, ACETYLATION, ACTIVATOR, ANTI-ONCOGENE, KEYWDS 2 APOPTOSIS, CELL CYCLE, COVALENT PROTEIN-RNA LINKAGE, CYTOPLASM, KEYWDS 3 DISEASE MUTATION, DNA-BINDING, ENDOPLASMIC RETICULUM, METAL-BINDING, KEYWDS 4 METHYLATION, NUCLEUS, PHOSPHOPROTEIN, TRANSCRIPTION, TRANSCRIPTION KEYWDS 5 REGULATION, UBL CONJUGATION, ZINC, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.A.MALECKA REVDAT 4 27-DEC-23 3EXJ 1 REMARK LINK REVDAT 3 25-OCT-17 3EXJ 1 REMARK REVDAT 2 03-FEB-09 3EXJ 1 JRNL REVDAT 1 16-DEC-08 3EXJ 0 JRNL AUTH K.A.MALECKA,W.C.HO,R.MARMORSTEIN JRNL TITL CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA. JRNL REF ONCOGENE V. 28 325 2009 JRNL REFN ISSN 0950-9232 JRNL PMID 18978813 JRNL DOI 10.1038/ONC.2008.400 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 36093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3032 REMARK 3 NUCLEIC ACID ATOMS : 468 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 578 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EXJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000049891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36093 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 70.186 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.46500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM LITHIUM CITRATE, 20% PEG 3350, REMARK 280 PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.37000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.00800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.37000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.00800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 96 REMARK 465 GLN A 97 REMARK 465 LEU A 292 REMARK 465 GLU B 290 REMARK 465 VAL B 291 REMARK 465 LEU B 292 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 ARG A 206 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 LYS A 289 CG CD CE NZ REMARK 470 VAL A 291 CG1 CG2 REMARK 470 SER B 96 OG REMARK 470 GLN B 97 CG CD OE1 NE2 REMARK 470 LYS B 162 CG CD CE NZ REMARK 470 GLN B 189 CG CD OE1 NE2 REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 289 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 P DG C 13 O3' DC D 12 2555 1.60 REMARK 500 OP2 DG C 13 C3' DC D 12 2555 2.11 REMARK 500 OP2 DG C 13 O3' DC D 12 2555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 13 O5' - P - OP2 ANGL. DEV. = -16.5 DEGREES REMARK 500 DG C 13 P - O5' - C5' ANGL. DEV. = -21.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 180 59.14 -94.67 REMARK 500 LYS A 289 -20.48 173.15 REMARK 500 SER B 180 58.24 -98.34 REMARK 500 ARG B 287 44.64 -63.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 173 SG REMARK 620 2 HIS A 176 ND1 102.1 REMARK 620 3 CYS A 235 SG 111.3 111.6 REMARK 620 4 CYS A 239 SG 114.9 100.5 115.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 173 SG REMARK 620 2 HIS B 176 ND1 102.0 REMARK 620 3 CYS B 235 SG 110.4 109.3 REMARK 620 4 CYS B 239 SG 115.5 106.5 112.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC B 585 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EXL RELATED DB: PDB REMARK 999 REMARK 999 THE COMPLETE CRYSTALLIZED DNA SEQUENCE IS REMARK 999 5'-TTGAGCATGCTCGAGCATGCTCA-3'. THE SEQUENCE IN THE REMARK 999 ASYMMETRIC UNIT IS ONLY HALF OF THE COMPLETE SEQUENCE REMARK 999 (GAGCATGCTCA FOR CHAIN C AND GAGCATGTCTC FOR CHAIN D. THE REMARK 999 BIOLOGICAL UNIT ISGENERATED BY APPLYING THE (-X, Y, -Z) REMARK 999 SYMMETRY. DBREF 3EXJ A 96 292 UNP P02340 P53_MOUSE 93 289 DBREF 3EXJ B 96 292 UNP P02340 P53_MOUSE 93 289 DBREF 3EXJ C 13 23 PDB 3EXJ 3EXJ 13 23 DBREF 3EXJ D 1 12 PDB 3EXJ 3EXJ 1 12 SEQRES 1 A 197 SER GLN LYS THR TYR GLN GLY ASN TYR GLY PHE HIS LEU SEQRES 2 A 197 GLY PHE LEU GLN SER GLY THR ALA LYS SER VAL MET CYS SEQRES 3 A 197 THR TYR SER PRO PRO LEU ASN LYS LEU PHE CYS GLN LEU SEQRES 4 A 197 ALA LYS THR CYS PRO VAL GLN LEU TRP VAL SER ALA THR SEQRES 5 A 197 PRO PRO ALA GLY SER ARG VAL ARG ALA MET ALA ILE TYR SEQRES 6 A 197 LYS LYS SER GLN HIS MET THR GLU VAL VAL ARG ARG CYS SEQRES 7 A 197 PRO HIS HIS GLU ARG CYS SER ASP GLY ASP GLY LEU ALA SEQRES 8 A 197 PRO PRO GLN HIS LEU ILE ARG VAL GLU GLY ASN LEU TYR SEQRES 9 A 197 PRO GLU TYR LEU GLU ASP ARG GLN THR PHE ARG HIS SER SEQRES 10 A 197 VAL VAL VAL PRO TYR GLU PRO PRO GLU ALA GLY SER GLU SEQRES 11 A 197 TYR THR THR ILE HIS TYR LYS TYR MET CYS ASN SER SER SEQRES 12 A 197 CYS MET GLY GLY MET ASN ARG ARG PRO ILE LEU THR ILE SEQRES 13 A 197 ILE THR LEU GLU ASP SER SER GLY ASN LEU LEU GLY ARG SEQRES 14 A 197 ASP SER PHE GLU VAL ARG VAL CYS ALA CYS PRO GLY ARG SEQRES 15 A 197 ASP ARG ARG THR GLU GLU GLU ASN PHE ARG LYS LYS GLU SEQRES 16 A 197 VAL LEU SEQRES 1 B 197 SER GLN LYS THR TYR GLN GLY ASN TYR GLY PHE HIS LEU SEQRES 2 B 197 GLY PHE LEU GLN SER GLY THR ALA LYS SER VAL MET CYS SEQRES 3 B 197 THR TYR SER PRO PRO LEU ASN LYS LEU PHE CYS GLN LEU SEQRES 4 B 197 ALA LYS THR CYS PRO VAL GLN LEU TRP VAL SER ALA THR SEQRES 5 B 197 PRO PRO ALA GLY SER ARG VAL ARG ALA MET ALA ILE TYR SEQRES 6 B 197 LYS LYS SER GLN HIS MET THR GLU VAL VAL ARG ARG CYS SEQRES 7 B 197 PRO HIS HIS GLU ARG CYS SER ASP GLY ASP GLY LEU ALA SEQRES 8 B 197 PRO PRO GLN HIS LEU ILE ARG VAL GLU GLY ASN LEU TYR SEQRES 9 B 197 PRO GLU TYR LEU GLU ASP ARG GLN THR PHE ARG HIS SER SEQRES 10 B 197 VAL VAL VAL PRO TYR GLU PRO PRO GLU ALA GLY SER GLU SEQRES 11 B 197 TYR THR THR ILE HIS TYR LYS TYR MET CYS ASN SER SER SEQRES 12 B 197 CYS MET GLY GLY MET ASN ARG ARG PRO ILE LEU THR ILE SEQRES 13 B 197 ILE THR LEU GLU ASP SER SER GLY ASN LEU LEU GLY ARG SEQRES 14 B 197 ASP SER PHE GLU VAL ARG VAL CYS ALA CYS PRO GLY ARG SEQRES 15 B 197 ASP ARG ARG THR GLU GLU GLU ASN PHE ARG LYS LYS GLU SEQRES 16 B 197 VAL LEU SEQRES 1 C 11 DG DA DG DC DA DT DG DC DT DC DA SEQRES 1 D 12 DT DT DG DA DG DC DA DT DG DC DT DC HET ZN A 1 1 HET FLC B 585 13 HET ZN B 2 1 HETNAM ZN ZINC ION HETNAM FLC CITRATE ANION FORMUL 5 ZN 2(ZN 2+) FORMUL 6 FLC C6 H5 O7 3- FORMUL 8 HOH *578(H2 O) HELIX 1 1 GLN A 101 GLY A 105 5 5 HELIX 2 2 THR A 115 VAL A 119 5 5 HELIX 3 3 CYS A 173 ARG A 178 1 6 HELIX 4 4 CYS A 274 LYS A 288 1 15 HELIX 5 5 GLN B 101 GLY B 105 5 5 HELIX 6 6 THR B 115 VAL B 119 5 5 HELIX 7 7 CYS B 173 ARG B 178 1 6 HELIX 8 8 CYS B 274 ARG B 287 1 14 SHEET 1 A 4 HIS A 107 PHE A 110 0 SHEET 2 A 4 CYS A 138 TRP A 143 -1 O GLN A 141 N GLY A 109 SHEET 3 A 4 THR A 227 TYR A 233 -1 O THR A 227 N LEU A 142 SHEET 4 A 4 ILE A 192 GLU A 195 -1 N GLU A 195 O HIS A 230 SHEET 1 B 7 CYS A 121 SER A 124 0 SHEET 2 B 7 LYS A 129 CYS A 132 -1 O PHE A 131 N THR A 122 SHEET 3 B 7 LEU A 261 VAL A 271 1 O GLU A 268 N LEU A 130 SHEET 4 B 7 ILE A 248 GLU A 255 -1 N LEU A 254 O LEU A 262 SHEET 5 B 7 ARG A 153 TYR A 160 -1 N ARG A 153 O GLU A 255 SHEET 6 B 7 HIS A 211 PRO A 216 -1 O VAL A 215 N VAL A 154 SHEET 7 B 7 GLU A 201 GLU A 204 -1 N LEU A 203 O SER A 212 SHEET 1 C 4 HIS B 107 PHE B 110 0 SHEET 2 C 4 CYS B 138 TRP B 143 -1 O GLN B 141 N GLY B 109 SHEET 3 C 4 THR B 227 TYR B 233 -1 O TYR B 231 N CYS B 138 SHEET 4 C 4 ILE B 192 GLU B 195 -1 N GLU B 195 O HIS B 230 SHEET 1 D 7 CYS B 121 SER B 124 0 SHEET 2 D 7 LYS B 129 CYS B 132 -1 O PHE B 131 N THR B 122 SHEET 3 D 7 LEU B 261 VAL B 271 1 O GLU B 268 N LEU B 130 SHEET 4 D 7 ILE B 248 GLU B 255 -1 N LEU B 254 O LEU B 262 SHEET 5 D 7 ARG B 153 TYR B 160 -1 N MET B 157 O ILE B 251 SHEET 6 D 7 HIS B 211 PRO B 216 -1 O VAL B 215 N VAL B 154 SHEET 7 D 7 GLU B 201 GLU B 204 -1 N LEU B 203 O SER B 212 LINK ZN ZN A 1 SG CYS A 173 1555 1555 2.37 LINK ZN ZN A 1 ND1 HIS A 176 1555 1555 2.18 LINK ZN ZN A 1 SG CYS A 235 1555 1555 2.38 LINK ZN ZN A 1 SG CYS A 239 1555 1555 2.34 LINK ZN ZN B 2 SG CYS B 173 1555 1555 2.32 LINK ZN ZN B 2 ND1 HIS B 176 1555 1555 2.11 LINK ZN ZN B 2 SG CYS B 235 1555 1555 2.48 LINK ZN ZN B 2 SG CYS B 239 1555 1555 2.36 SITE 1 AC1 4 CYS A 173 HIS A 176 CYS A 235 CYS A 239 SITE 1 AC2 8 LYS A 162 SER A 163 HOH A 373 HOH A 423 SITE 2 AC2 8 THR B 115 LYS B 117 PRO B 139 HIS B 230 SITE 1 AC3 4 CYS B 173 HIS B 176 CYS B 235 CYS B 239 CRYST1 114.740 68.016 75.162 90.00 111.12 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008715 0.000000 0.003366 0.00000 SCALE2 0.000000 0.014702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014263 0.00000