HEADER VIRAL PROTEIN 21-OCT-08 3EYJ TITLE STRUCTURE OF INFLUENZA HAEMAGGLUTININ IN COMPLEX WITH AN INHIBITOR OF TITLE 2 MEMBRANE FUSION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ HA1 CHAIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: HEMAGGLUTININ HA2 CHAIN; COMPND 6 CHAIN: B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 6 ORGANISM_TAXID: 11320 KEYWDS INFLUENZA, HEMAGGLUTININ, INHIBITOR, ENVELOPE PROTEIN, FUSION KEYWDS 2 PROTEIN, GLYCOPROTEIN, LIPOPROTEIN, MEMBRANE, PALMITATE, KEYWDS 3 TRANSMEMBRANE, VIRION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.J.RUSSELL,P.S.KERRY,D.J.STEVENS,D.A.STEINAHUER,S.R.MARTIN, AUTHOR 2 S.J.GAMBLIN,J.J.SKEHEL REVDAT 2 27-DEC-23 3EYJ 1 REMARK REVDAT 1 13-JAN-09 3EYJ 0 JRNL AUTH R.J.RUSSELL,P.S.KERRY,D.J.STEVENS,D.A.STEINHAUER,S.R.MARTIN, JRNL AUTH 2 S.J.GAMBLIN,J.J.SKEHEL JRNL TITL STRUCTURE OF INFLUENZA HEMAGGLUTININ IN COMPLEX WITH AN JRNL TITL 2 INHIBITOR OF MEMBRANE FUSION JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 17736 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 19004788 JRNL DOI 10.1073/PNAS.0807142105 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.890 REMARK 3 COMPLETENESS FOR RANGE (%) : 51.8 REMARK 3 NUMBER OF REFLECTIONS : 27461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1381 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5867 - 5.5906 0.54 2734 151 0.2341 0.2391 REMARK 3 2 5.5906 - 4.4423 0.53 2638 148 0.1585 0.2045 REMARK 3 3 4.4423 - 3.8822 0.52 2633 131 0.1488 0.1726 REMARK 3 4 3.8822 - 3.5278 0.51 2598 130 0.1637 0.2175 REMARK 3 5 3.5278 - 3.2753 0.51 2581 121 0.1816 0.2302 REMARK 3 6 3.2753 - 3.0824 0.51 2593 140 0.1729 0.2588 REMARK 3 7 3.0824 - 2.9282 0.51 2552 142 0.1910 0.2417 REMARK 3 8 2.9282 - 2.8008 0.51 2619 132 0.2086 0.3013 REMARK 3 9 2.8008 - 2.6931 0.51 2565 148 0.2253 0.3297 REMARK 3 10 2.6931 - 2.6000 0.51 2567 138 0.2391 0.3175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 33.53 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EYJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049927. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27461 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, PEG8000, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 69.38250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.38250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.38250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.38250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 69.38250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.38250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 69.38250 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 69.38250 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 69.38250 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 69.38250 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 69.38250 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 69.38250 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 69.38250 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 69.38250 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 69.38250 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 69.38250 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 69.38250 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 69.38250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -145.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 330 REMARK 465 GLN A 331 REMARK 465 ALA A 332 REMARK 465 LYS A 333 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 131 OG1 THR A 158 0.67 REMARK 500 O SER A 263 O HOH A 389 1.78 REMARK 500 O LYS A 264 CG2 THR A 267 1.96 REMARK 500 OD1 ASN A 218 NH2 ARG A 222 2.00 REMARK 500 CE LYS A 131 OG1 THR A 158 2.01 REMARK 500 NZ LYS A 131 CB THR A 158 2.07 REMARK 500 O GLU B 103 O HOH B 176 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB SER A 214 ND2 ASN A 218 9555 1.89 REMARK 500 NE2 GLN A 124 ND2 ASN B 160 2554 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 158 C ASN A 159 N 0.292 REMARK 500 GLY A 161 C ASN A 162 N -0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 15 CA - CB - CG ANGL. DEV. = -16.1 DEGREES REMARK 500 THR A 158 CA - C - N ANGL. DEV. = -33.9 DEGREES REMARK 500 THR A 158 O - C - N ANGL. DEV. = 33.3 DEGREES REMARK 500 ASN A 159 C - N - CA ANGL. DEV. = 35.9 DEGREES REMARK 500 LYS A 264 C - N - CA ANGL. DEV. = 26.3 DEGREES REMARK 500 LYS A 264 O - C - N ANGL. DEV. = 16.3 DEGREES REMARK 500 SER A 266 CA - C - O ANGL. DEV. = 13.5 DEGREES REMARK 500 THR A 267 C - N - CA ANGL. DEV. = -18.3 DEGREES REMARK 500 SER A 269 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 SER A 269 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 -20.76 79.75 REMARK 500 GLN A 62 -108.03 57.32 REMARK 500 ASN A 159 51.90 75.86 REMARK 500 ASN A 167 85.02 -156.08 REMARK 500 LYS A 198 -64.26 70.89 REMARK 500 VAL A 199 151.98 -49.29 REMARK 500 SER A 266 64.73 23.96 REMARK 500 GLU B 57 112.91 -26.69 REMARK 500 TYR B 63 -106.36 -112.70 REMARK 500 GLN B 65 -102.24 -129.70 REMARK 500 ARG B 127 -128.46 53.32 REMARK 500 PHE B 141 38.44 -85.90 REMARK 500 ASP B 145 -179.37 -69.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER A 266 -10.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EYK RELATED DB: PDB REMARK 900 RELATED ID: 3EYM RELATED DB: PDB DBREF 3EYJ A 9 333 UNP P26137 HEMA_I82A0 20 342 DBREF 3EYJ B 1 172 UNP P26137 HEMA_I82A0 343 514 SEQRES 1 A 323 GLY ASN PRO ILE ILE CYS LEU GLY HIS HIS ALA VAL GLU SEQRES 2 A 323 ASN GLY THR SER VAL LYS THR LEU THR ASP ASN HIS VAL SEQRES 3 A 323 GLU VAL VAL SER ALA LYS GLU LEU VAL GLU THR LYS HIS SEQRES 4 A 323 THR ASP GLU LEU CYS PRO SER PRO LEU LYS LEU VAL ASP SEQRES 5 A 323 GLY GLN ASP CYS ASP LEU ILE ASN GLY ALA LEU GLY SER SEQRES 6 A 323 PRO GLY CYS ASP ARG LEU GLN ASP THR THR TRP ASP VAL SEQRES 7 A 323 PHE ILE GLU ARG PRO THR ALA VAL ASP THR CYS TYR PRO SEQRES 8 A 323 PHE ASP VAL PRO ASP TYR GLN SER LEU ARG SER ILE LEU SEQRES 9 A 323 ALA SER SER GLY SER LEU GLU PHE ILE ALA GLU GLN PHE SEQRES 10 A 323 THR TRP ASN GLY VAL LYS VAL ASP GLY SER SER SER ALA SEQRES 11 A 323 CYS LEU ARG GLY GLY ARG ASN SER PHE PHE SER ARG LEU SEQRES 12 A 323 ASN TRP LEU THR LYS ALA THR ASN GLY ASN TYR GLY PRO SEQRES 13 A 323 ILE ASN VAL THR LYS GLU ASN THR GLY SER TYR VAL ARG SEQRES 14 A 323 LEU TYR LEU TRP GLY VAL HIS HIS PRO SER SER ASP ASN SEQRES 15 A 323 GLU GLN THR ASP LEU TYR LYS VAL ALA THR GLY ARG VAL SEQRES 16 A 323 THR VAL SER THR ARG SER ASP GLN ILE SER ILE VAL PRO SEQRES 17 A 323 ASN ILE GLY SER ARG PRO ARG VAL ARG ASN GLN SER GLY SEQRES 18 A 323 ARG ILE SER ILE TYR TRP THR LEU VAL ASN PRO GLY ASP SEQRES 19 A 323 SER ILE ILE PHE ASN SER ILE GLY ASN LEU ILE ALA PRO SEQRES 20 A 323 ARG GLY HIS TYR LYS ILE SER LYS SER THR LYS SER THR SEQRES 21 A 323 VAL LEU LYS SER ASP LYS ARG ILE GLY SER CYS THR SER SEQRES 22 A 323 PRO CYS LEU THR ASP LYS GLY SER ILE GLN SER ASP LYS SEQRES 23 A 323 PRO PHE GLN ASN VAL SER ARG ILE ALA ILE GLY ASN CYS SEQRES 24 A 323 PRO LYS TYR VAL LYS GLN GLY SER LEU MET LEU ALA THR SEQRES 25 A 323 GLY MET ARG ASN ILE PRO GLY LYS GLN ALA LYS SEQRES 1 B 172 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU ASN GLY SEQRES 2 B 172 TRP GLN GLY LEU ILE ASP GLY TRP TYR GLY PHE ARG HIS SEQRES 3 B 172 GLN ASN ALA GLU GLY THR GLY THR ALA ALA ASP LEU LYS SEQRES 4 B 172 SER THR GLN ALA ALA ILE ASP GLN ILE ASN GLY LYS LEU SEQRES 5 B 172 ASN ARG LEU ILE GLU LYS THR ASN GLU LYS TYR HIS GLN SEQRES 6 B 172 ILE GLU LYS GLU PHE GLU GLN VAL GLU GLY ARG ILE GLN SEQRES 7 B 172 ASP LEU GLU LYS TYR VAL GLU ASP THR LYS ILE ASP LEU SEQRES 8 B 172 TRP SER TYR ASN ALA GLU LEU LEU VAL ALA LEU GLU ASN SEQRES 9 B 172 GLN HIS THR ILE ASP VAL THR ASP SER GLU MET ASN LYS SEQRES 10 B 172 LEU PHE GLU ARG VAL ARG ARG GLN LEU ARG GLU ASN ALA SEQRES 11 B 172 GLU ASP GLN GLY ASN GLY CYS PHE GLU ILE PHE HIS GLN SEQRES 12 B 172 CYS ASP ASN ASN CYS ILE GLU SER ILE ARG ASN GLY THR SEQRES 13 B 172 TYR ASP HIS ASN ILE TYR ARG ASP GLU ALA ILE ASN ASN SEQRES 14 B 172 ARG ILE LYS FORMUL 3 HOH *364(H2 O) HELIX 1 1 ASP A 65 GLY A 72 1 8 HELIX 2 2 SER A 73 GLN A 80 5 8 HELIX 3 3 ASP A 104 GLY A 116 1 13 HELIX 4 4 SER A 189 LYS A 198 1 10 HELIX 5 5 ASP B 37 GLU B 57 1 21 HELIX 6 6 GLY B 75 ARG B 127 1 53 HELIX 7 7 ASP B 145 ASN B 154 1 10 HELIX 8 8 ASP B 158 LYS B 172 1 15 SHEET 1 A 5 GLY B 31 ALA B 36 0 SHEET 2 A 5 TYR B 22 ASN B 28 -1 N ASN B 28 O GLY B 31 SHEET 3 A 5 ILE A 12 HIS A 17 -1 N CYS A 14 O ARG B 25 SHEET 4 A 5 CYS B 137 ILE B 140 -1 O PHE B 138 N ILE A 13 SHEET 5 A 5 ALA B 130 ASP B 132 -1 N GLU B 131 O GLU B 139 SHEET 1 B 2 THR A 24 VAL A 26 0 SHEET 2 B 2 VAL A 34 VAL A 36 -1 O VAL A 36 N THR A 24 SHEET 1 C 2 ALA A 39 GLU A 41 0 SHEET 2 C 2 MET A 319 ALA A 321 -1 O LEU A 320 N LYS A 40 SHEET 1 D 3 VAL A 43 GLU A 44 0 SHEET 2 D 3 PHE A 298 GLN A 299 1 O PHE A 298 N GLU A 44 SHEET 3 D 3 LYS A 311 TYR A 312 1 O LYS A 311 N GLN A 299 SHEET 1 E 3 LEU A 58 ASP A 60 0 SHEET 2 E 3 VAL A 86 GLU A 89 1 O ILE A 88 N VAL A 59 SHEET 3 E 3 THR A 270 LYS A 273 1 O LEU A 272 N PHE A 87 SHEET 1 F 5 PHE A 100 ASP A 101 0 SHEET 2 F 5 ARG A 231 VAL A 239 1 O ILE A 234 N ASP A 101 SHEET 3 F 5 VAL A 177 HIS A 186 -1 N TRP A 182 O TYR A 235 SHEET 4 F 5 GLY A 258 ILE A 262 -1 O ILE A 262 N VAL A 177 SHEET 5 F 5 ILE A 121 ALA A 122 -1 N ILE A 121 O HIS A 259 SHEET 1 G 5 PHE A 100 ASP A 101 0 SHEET 2 G 5 ARG A 231 VAL A 239 1 O ILE A 234 N ASP A 101 SHEET 3 G 5 VAL A 177 HIS A 186 -1 N TRP A 182 O TYR A 235 SHEET 4 G 5 LEU A 253 PRO A 256 -1 O ILE A 254 N GLY A 183 SHEET 5 G 5 LEU A 151 TRP A 153 -1 N ASN A 152 O ALA A 255 SHEET 1 H 2 VAL A 130 LYS A 131 0 SHEET 2 H 2 THR A 155 LYS A 156 -1 O THR A 155 N LYS A 131 SHEET 1 I 2 SER A 136 ARG A 141 0 SHEET 2 I 2 ARG A 144 SER A 146 -1 O ARG A 144 N ARG A 141 SHEET 1 J 4 ILE A 166 GLU A 171 0 SHEET 2 J 4 SER A 244 GLY A 251 -1 O SER A 249 N ILE A 166 SHEET 3 J 4 ARG A 203 SER A 207 -1 N THR A 205 O ASN A 248 SHEET 4 J 4 GLN A 212 ILE A 215 -1 O ILE A 215 N VAL A 204 SHEET 1 K 4 GLY A 290 SER A 291 0 SHEET 2 K 4 CYS A 285 THR A 287 -1 N THR A 287 O GLY A 290 SHEET 3 K 4 ALA A 305 ASN A 308 -1 O ILE A 306 N LEU A 286 SHEET 4 K 4 GLU B 61 LYS B 62 -1 O LYS B 62 N GLY A 307 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.02 SSBOND 2 CYS A 52 CYS A 281 1555 1555 2.05 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.02 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.06 SSBOND 5 CYS A 285 CYS A 309 1555 1555 2.06 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.05 CISPEP 1 SER A 54 PRO A 55 0 2.60 CRYST1 138.765 138.765 138.765 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007206 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007206 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007206 0.00000