HEADER TRANSPORT 22-OCT-08 3EYY TITLE STRUCTURAL BASIS FOR THE SPECIALIZATION OF NUR, A NICKEL-SPECIFIC FUR TITLE 2 HOMOLOGUE, IN METAL SENSING AND DNA RECOGNITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE IRON UPTAKE REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; SOURCE 3 ORGANISM_TAXID: 1902; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-3A KEYWDS NUR, NICKEL-UPTAKE REGULATOR, D-DOMAIN, DIMERIZATION DOMAIN, DB- KEYWDS 2 DOMAIN, DNA-BINDING DOMAIN, TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.-S.CHA,Y.J.AN REVDAT 3 27-DEC-23 3EYY 1 REMARK LINK REVDAT 2 23-JUN-09 3EYY 1 JRNL REVDAT 1 09-JUN-09 3EYY 0 JRNL AUTH Y.J.AN,B.-E.AHN,A.-R.HAN,H.-M.KIM,K.M.CHUNG,J.-H.SHIN, JRNL AUTH 2 Y.-B.CHO,J.-H.ROE,S.-S.CHA JRNL TITL STRUCTURAL BASIS FOR THE SPECIALIZATION OF NUR, A JRNL TITL 2 NICKEL-SPECIFIC FUR HOMOLOG, IN METAL SENSING AND DNA JRNL TITL 3 RECOGNITION JRNL REF NUCLEIC ACIDS RES. V. 37 3442 2009 JRNL REFN ISSN 0305-1048 JRNL PMID 19336416 JRNL DOI 10.1093/NAR/GKP198 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.100 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1031976.850 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 13008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 655 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1904 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 102 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.46000 REMARK 3 B22 (A**2) : 2.46000 REMARK 3 B33 (A**2) : -4.91000 REMARK 3 B12 (A**2) : 2.59000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.32 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.37 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.740 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 40.05 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : MAL.PARAM REMARK 3 PARAMETER FILE 5 : EDO.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 4 : MAL.TOP REMARK 3 TOPOLOGY FILE 5 : EDO.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3EYY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000049942. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4847, 1.4857, 1.4510 REMARK 200 MONOCHROMATOR : NI MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18205 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 3350, 0.4M SODIUM MALONATE (PH REMARK 280 7), 0.1MM BENZAMIDINE HYDROCHLORIDE, 0.1MM NICL2, PH 7.0, REMARK 280 MICROBATCH, TEMPERATURE 296.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.57733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.15467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 CYS A 136 REMARK 465 SER A 137 REMARK 465 LEU A 138 REMARK 465 LYS A 139 REMARK 465 GLY A 140 REMARK 465 SER A 141 REMARK 465 THR A 142 REMARK 465 THR A 143 REMARK 465 ASP A 144 REMARK 465 SER A 145 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 CYS B 136 REMARK 465 SER B 137 REMARK 465 LEU B 138 REMARK 465 LYS B 139 REMARK 465 GLY B 140 REMARK 465 SER B 141 REMARK 465 THR B 142 REMARK 465 THR B 143 REMARK 465 ASP B 144 REMARK 465 SER B 145 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 4 OG1 CG2 REMARK 470 SER A 8 OG REMARK 470 ARG A 11 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 12 CG CD OE1 NE2 REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 ASP A 84 CG OD1 OD2 REMARK 470 ARG A 85 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 87 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 95 CG OD1 OD2 REMARK 470 THR A 97 OG1 CG2 REMARK 470 ASN A 98 CG OD1 ND2 REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 LEU A 114 CG CD1 CD2 REMARK 470 ARG A 115 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 GLN A 117 CG CD OE1 NE2 REMARK 470 ARG A 132 CG CD NE CZ NH1 NH2 REMARK 470 CYS A 133 SG REMARK 470 GLU A 134 CG CD OE1 OE2 REMARK 470 THR B 4 OG1 CG2 REMARK 470 SER B 8 OG REMARK 470 ARG B 11 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 12 CG CD OE1 NE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 ASP B 84 CG OD1 OD2 REMARK 470 ARG B 85 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 87 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 95 CG OD1 OD2 REMARK 470 THR B 97 OG1 CG2 REMARK 470 ASN B 98 CG OD1 ND2 REMARK 470 LYS B 113 CG CD CE NZ REMARK 470 LEU B 114 CG CD1 CD2 REMARK 470 ARG B 115 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 116 CG CD OE1 OE2 REMARK 470 GLN B 117 CG CD OE1 NE2 REMARK 470 ARG B 132 CG CD NE CZ NH1 NH2 REMARK 470 CYS B 133 SG REMARK 470 GLU B 134 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 12 1.46 -69.21 REMARK 500 GLU A 32 110.97 63.27 REMARK 500 LEU A 73 -138.34 -119.11 REMARK 500 ARG A 94 16.20 -68.36 REMARK 500 ASP A 95 -53.67 -168.83 REMARK 500 VAL A 106 17.66 -62.77 REMARK 500 ALA A 107 21.78 -150.86 REMARK 500 GLU A 116 -70.70 -93.37 REMARK 500 MET A 124 2.00 82.28 REMARK 500 GLN B 12 1.21 -69.52 REMARK 500 GLU B 32 111.06 63.53 REMARK 500 LEU B 73 -137.99 -119.76 REMARK 500 ARG B 94 16.26 -68.18 REMARK 500 ASP B 95 -53.82 -168.96 REMARK 500 VAL B 106 17.76 -62.73 REMARK 500 ALA B 107 22.09 -151.07 REMARK 500 GLU B 116 -70.70 -93.45 REMARK 500 MET B 124 1.80 82.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 147 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 33 NE2 REMARK 620 2 HIS A 86 ND1 92.8 REMARK 620 3 HIS A 88 NE2 154.8 96.3 REMARK 620 4 HIS A 90 NE2 90.9 149.1 93.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 146 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 70 NE2 REMARK 620 2 HIS A 72 NE2 97.8 REMARK 620 3 HIS A 126 NE2 91.4 97.1 REMARK 620 4 EDO A 151 O2 88.9 85.0 177.8 REMARK 620 5 MLI A 153 O8 171.4 90.7 86.3 93.1 REMARK 620 6 MLI A 153 O6 90.9 170.5 86.5 91.3 80.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 147 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 33 NE2 REMARK 620 2 HIS B 86 ND1 94.2 REMARK 620 3 HIS B 88 NE2 149.2 98.8 REMARK 620 4 HIS B 90 NE2 88.6 154.0 91.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 146 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 70 NE2 REMARK 620 2 HIS B 72 NE2 96.0 REMARK 620 3 HIS B 126 NE2 89.4 95.9 REMARK 620 4 EDO B 150 O2 95.0 96.8 166.0 REMARK 620 5 MLI B 152 O8 88.1 174.8 80.8 86.1 REMARK 620 6 MLI B 152 O6 170.4 92.2 84.7 89.0 83.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI B 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 154 DBREF 3EYY A 1 145 UNP Q9K4F8 Q9K4F8_STRCO 1 145 DBREF 3EYY B 1 145 UNP Q9K4F8 Q9K4F8_STRCO 1 145 SEQRES 1 A 145 MET VAL SER THR ASP TRP LYS SER ASP LEU ARG GLN ARG SEQRES 2 A 145 GLY TYR ARG LEU THR PRO GLN ARG GLN LEU VAL LEU GLU SEQRES 3 A 145 ALA VAL ASP THR LEU GLU HIS ALA THR PRO ASP ASP ILE SEQRES 4 A 145 LEU GLY GLU VAL ARG LYS THR ALA SER GLY ILE ASN ILE SEQRES 5 A 145 SER THR VAL TYR ARG THR LEU GLU LEU LEU GLU GLU LEU SEQRES 6 A 145 GLY LEU VAL SER HIS ALA HIS LEU GLY HIS GLY ALA PRO SEQRES 7 A 145 THR TYR HIS LEU ALA ASP ARG HIS HIS HIS ILE HIS LEU SEQRES 8 A 145 VAL CYS ARG ASP CYS THR ASN VAL ILE GLU ALA ASP LEU SEQRES 9 A 145 SER VAL ALA ALA ASP PHE THR ALA LYS LEU ARG GLU GLN SEQRES 10 A 145 PHE GLY PHE ASP THR ASP MET LYS HIS PHE ALA ILE PHE SEQRES 11 A 145 GLY ARG CYS GLU SER CYS SER LEU LYS GLY SER THR THR SEQRES 12 A 145 ASP SER SEQRES 1 B 145 MET VAL SER THR ASP TRP LYS SER ASP LEU ARG GLN ARG SEQRES 2 B 145 GLY TYR ARG LEU THR PRO GLN ARG GLN LEU VAL LEU GLU SEQRES 3 B 145 ALA VAL ASP THR LEU GLU HIS ALA THR PRO ASP ASP ILE SEQRES 4 B 145 LEU GLY GLU VAL ARG LYS THR ALA SER GLY ILE ASN ILE SEQRES 5 B 145 SER THR VAL TYR ARG THR LEU GLU LEU LEU GLU GLU LEU SEQRES 6 B 145 GLY LEU VAL SER HIS ALA HIS LEU GLY HIS GLY ALA PRO SEQRES 7 B 145 THR TYR HIS LEU ALA ASP ARG HIS HIS HIS ILE HIS LEU SEQRES 8 B 145 VAL CYS ARG ASP CYS THR ASN VAL ILE GLU ALA ASP LEU SEQRES 9 B 145 SER VAL ALA ALA ASP PHE THR ALA LYS LEU ARG GLU GLN SEQRES 10 B 145 PHE GLY PHE ASP THR ASP MET LYS HIS PHE ALA ILE PHE SEQRES 11 B 145 GLY ARG CYS GLU SER CYS SER LEU LYS GLY SER THR THR SEQRES 12 B 145 ASP SER HET NI A 146 1 HET ZN A 147 1 HET CL A 148 1 HET CL A 149 1 HET CL A 150 1 HET EDO A 151 4 HET EDO A 152 4 HET MLI A 153 7 HET MLI A 154 7 HET NI B 146 1 HET ZN B 147 1 HET CL B 148 1 HET CL B 149 1 HET EDO B 150 4 HET EDO B 151 4 HET MLI B 152 7 HETNAM NI NICKEL (II) ION HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM MLI MALONATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NI 2(NI 2+) FORMUL 4 ZN 2(ZN 2+) FORMUL 5 CL 5(CL 1-) FORMUL 8 EDO 4(C2 H6 O2) FORMUL 10 MLI 3(C3 H2 O4 2-) FORMUL 19 HOH *82(H2 O) HELIX 1 1 ASP A 5 GLN A 12 1 8 HELIX 2 2 THR A 18 GLU A 32 1 15 HELIX 3 3 THR A 35 LYS A 45 1 11 HELIX 4 4 ASN A 51 LEU A 65 1 15 HELIX 5 5 GLY A 74 GLY A 76 5 3 HELIX 6 6 ASP A 103 VAL A 106 5 4 HELIX 7 7 ALA A 107 PHE A 118 1 12 HELIX 8 8 ASP B 5 GLN B 12 1 8 HELIX 9 9 THR B 18 GLU B 32 1 15 HELIX 10 10 THR B 35 LYS B 45 1 11 HELIX 11 11 ASN B 51 LEU B 65 1 15 HELIX 12 12 GLY B 74 GLY B 76 5 3 HELIX 13 13 ASP B 103 VAL B 106 5 4 HELIX 14 14 ALA B 107 PHE B 118 1 12 SHEET 1 A 2 VAL A 68 HIS A 72 0 SHEET 2 A 2 PRO A 78 LEU A 82 -1 O THR A 79 N ALA A 71 SHEET 1 B 4 VAL A 99 ALA A 102 0 SHEET 2 B 4 ILE A 89 CYS A 93 -1 N ILE A 89 O ALA A 102 SHEET 3 B 4 ILE A 129 CYS A 133 1 O ILE A 129 N VAL A 92 SHEET 4 B 4 PHE B 120 THR B 122 -1 O ASP B 121 N ARG A 132 SHEET 1 C 4 PHE A 120 THR A 122 0 SHEET 2 C 4 ILE B 129 CYS B 133 -1 O ARG B 132 N ASP A 121 SHEET 3 C 4 ILE B 89 CYS B 93 1 N VAL B 92 O ILE B 129 SHEET 4 C 4 VAL B 99 ALA B 102 -1 O ALA B 102 N ILE B 89 SHEET 1 D 2 VAL B 68 HIS B 72 0 SHEET 2 D 2 PRO B 78 LEU B 82 -1 O THR B 79 N ALA B 71 LINK NE2 HIS A 33 ZN ZN A 147 1555 1555 2.16 LINK NE2 HIS A 70 NI NI A 146 1555 1555 2.06 LINK NE2 HIS A 72 NI NI A 146 1555 1555 2.09 LINK ND1 HIS A 86 ZN ZN A 147 1555 1555 2.39 LINK NE2 HIS A 88 ZN ZN A 147 1555 1555 2.61 LINK NE2 HIS A 90 ZN ZN A 147 1555 1555 2.18 LINK NE2 HIS A 126 NI NI A 146 1555 1555 2.08 LINK NI NI A 146 O2 EDO A 151 1555 1555 2.41 LINK NI NI A 146 O8 MLI A 153 1555 1555 2.14 LINK NI NI A 146 O6 MLI A 153 1555 1555 2.17 LINK NE2 HIS B 33 ZN ZN B 147 1555 1555 2.21 LINK NE2 HIS B 70 NI NI B 146 1555 1555 2.10 LINK NE2 HIS B 72 NI NI B 146 1555 1555 2.10 LINK ND1 HIS B 86 ZN ZN B 147 1555 1555 2.29 LINK NE2 HIS B 88 ZN ZN B 147 1555 1555 2.62 LINK NE2 HIS B 90 ZN ZN B 147 1555 1555 2.23 LINK NE2 HIS B 126 NI NI B 146 1555 1555 2.12 LINK NI NI B 146 O2 EDO B 150 1555 1555 2.38 LINK NI NI B 146 O8 MLI B 152 1555 1555 2.00 LINK NI NI B 146 O6 MLI B 152 1555 1555 2.14 SITE 1 AC1 5 HIS B 70 HIS B 72 HIS B 126 EDO B 150 SITE 2 AC1 5 MLI B 152 SITE 1 AC2 5 HIS A 70 HIS A 72 HIS A 126 EDO A 151 SITE 2 AC2 5 MLI A 153 SITE 1 AC3 4 HIS B 33 HIS B 86 HIS B 88 HIS B 90 SITE 1 AC4 4 HIS A 33 HIS A 86 HIS A 88 HIS A 90 SITE 1 AC5 2 ASP B 5 SER B 8 SITE 1 AC6 2 ASP A 5 SER A 8 SITE 1 AC7 2 ASP A 29 GLU A 32 SITE 1 AC8 2 ASP B 29 GLU B 32 SITE 1 AC9 5 HIS A 70 HIS A 72 NI A 146 MLI A 153 SITE 2 AC9 5 HIS B 75 SITE 1 BC1 5 HIS A 75 HIS B 70 HIS B 72 NI B 146 SITE 2 BC1 5 MLI B 152 SITE 1 BC2 2 ARG A 13 TYR A 15 SITE 1 BC3 9 GLY A 74 HIS A 75 HIS B 70 HIS B 72 SITE 2 BC3 9 HIS B 126 PHE B 127 NI B 146 EDO B 150 SITE 3 BC3 9 HOH B 153 SITE 1 BC4 10 HIS A 70 HIS A 72 HIS A 126 PHE A 127 SITE 2 BC4 10 NI A 146 EDO A 151 HOH A 181 HOH A 184 SITE 3 BC4 10 GLY B 74 HIS B 75 SITE 1 BC5 3 GLU A 63 GLU A 64 GLY A 66 CRYST1 79.164 79.164 49.732 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012632 0.007293 0.000000 0.00000 SCALE2 0.000000 0.014586 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020108 0.00000