HEADER TRANSFERASE 03-NOV-98 3EZB TITLE COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE- TITLE 2 CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (PHOSPHOTRANSFER SYSTEM, ENZYME I); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: AMINO-TERMINAL DOMAIN RESIDUES 1 - 259; COMPND 5 EC: 2.7.3.9; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PROTEIN (PHOSPHOCARRIER PROTEIN HPR); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: GI698; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PLP2; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 STRAIN: GI698; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PSP100 KEYWDS PHOSPHOTRANSFERASE, KINASE, SUGAR TRANSPORT, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR G.M.CLORE,D.S.GARRETT,A.M.GRONENBORN REVDAT 5 27-DEC-23 3EZB 1 REMARK REVDAT 4 16-MAR-22 3EZB 1 REMARK SEQADV REVDAT 3 24-FEB-09 3EZB 1 VERSN REVDAT 2 29-DEC-99 3EZB 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 16-DEC-99 3EZB 0 SPRSDE 29-DEC-99 3EZB 3EZD JRNL AUTH D.S.GARRETT,Y.J.SEOK,A.PETERKOFSKY,A.M.GRONENBORN,G.M.CLORE JRNL TITL SOLUTION STRUCTURE OF THE 40,000 MR PHOSPHORYL TRANSFER JRNL TITL 2 COMPLEX BETWEEN THE N-TERMINAL DOMAIN OF ENZYME I AND HPR. JRNL REF NAT.STRUCT.BIOL. V. 6 166 1999 JRNL REFN ISSN 1072-8368 JRNL PMID 10048929 JRNL DOI 10.1038/5854 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.S.GARRETT,Y.J.SEOK,A.PETERKOFSKY,G.M.CLORE,A.M.GRONENBORN REMARK 1 TITL TAUTOMERIC STATE AND PKA OF THE PHOSPHORYLATED ACTI REMARK 1 TITL 2 HISTIDINE IN THE N- TERMINAL DOMAIN OF ENZYME I OF T REMARK 1 TITL 3 ESCHRICHIA COLI PHOSPHOENOLPYRUVATE:SUGAR PHOSPHOTR SYSTEM REMARK 1 REF PROTEIN SCI. V. 7 789 1998 REMARK 1 REFN ISSN 0961-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.S.GARRETT,Y.J.SEOK,D.I.LIAO,A.PETERKOFSKY,A.M.GRONENBORN, REMARK 1 AUTH 2 G.M.CLORE REMARK 1 TITL SOLUTION STRUCTURE OF THE 30 KDA N-TERMINAL DOMAIN OF ENZYME REMARK 1 TITL 2 I OF THE ESCHERICHIA COLI PHOSPHOENOLPYRUVATE:SUGAR REMARK 1 TITL 3 PHOSPHOTRANSFERASE SYSTEM BY MULTIDIMENSIONAL NMR REMARK 1 REF BIOCHEMISTRY V. 36 2517 1997 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH D.S.GARRETT,Y.J.SEOK,A.PETERKOFSKY,G.M.CLORE,A.M.GRONENBORN REMARK 1 TITL IDENTIFICATION BY NMR OF THE BINDING SURFACE FOR TH REMARK 1 TITL 2 HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR ON REMARK 1 TITL 3 N-TERMINAL DOMAIN OF ENZYME I OF THE ESCHERICHIA CO REMARK 1 TITL 4 PHOSPHOTRANSFERASE SYSTEM REMARK 1 REF BIOCHEMISTRY V. 36 4393 1997 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS, CLORE, DELANO, GROS, GROSSE REMARK 3 -KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, READ, REMARK 3 RICE WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES WERE CALCULATED USING REMARK 3 THE SIMULATED ANNEALING PROTOCOL OF NILGES ET AL. (1988) FEBS REMARK 3 LETT. 229, 129-136 USING THE PROGRAM CNS MODIFIED TO INCORPORATE REMARK 3 COUPLING CONSTANT RESTRAINTS (GARRETT ET AL. (1984) J. MAGN. REMARK 3 RESON. SERIES B 104, 99-103), CARBON CHEMICAL SHIFT RESTRAINTS, REMARK 3 (KUSZEWSKI ET AL. (1995) J. MAGN. RESON. SERIES B 106, 92-96) REMARK 3 RESTRAINTS, AND RESIDUAL DIPOLAR COUPLING RESTRAINTS (CLORE ET REMARK 3 AL. J. MAGN. RESON 131, 159-162 (1998); J. MAGN 133, 216-221 REMARK 3 (1998)). REMARK 4 REMARK 4 3EZB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-99. REMARK 100 THE DEPOSITION ID IS D_1000008052. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 7.00 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1) TRIPLE RESONANCE FOR REMARK 210 ASSIGNMENT OF PROTEIN. (2) REMARK 210 QUANTITATIVE J CORRELATION FOR REMARK 210 COUPLING CONSTANTS. (3) 3D; 4D REMARK 210 HETERONUCLEAR SEPARATED; REMARK 210 FILTERED NOE E (4) IPAP EXPTS REMARK 210 FOR DIPOLAR COUPLINGS DIPOLAR REMARK 210 COUPLINGS WERE MEASURED IN A REMARK 210 NEMATIC PHASE OF A CO SUSPENSION REMARK 210 OF PHAGE FD (CLORE ET AL. 1998 REMARK 210 J. AM. CHEM. SOC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : DMX500; DMX600; DMX750 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : REGULARIZED MEAN STRUCTURE REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE 3D STRUCTURE OF THE EIN-HPR COMPLEX WAS SOLVED BY REMARK 210 MULTI HETERONUCLEAR NMR AND IS BASED ON 5475 REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-40 REMARK 470 RES CSSEQI ATOMS REMARK 470 MET A 1 N REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY A 4 HD22 ASN A 225 1.27 REMARK 500 O LEU B 350 H LEU B 353 1.43 REMARK 500 O ALA A 91 H ASP A 95 1.54 REMARK 500 O LYS A 15 H ILE A 157 1.55 REMARK 500 O LYS A 60 HG1 THR A 64 1.55 REMARK 500 O GLU A 74 H MET A 78 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 6 98.14 53.30 REMARK 500 1 LYS A 49 -73.70 -72.46 REMARK 500 1 ASP A 119 48.98 -99.33 REMARK 500 1 ASP A 148 103.36 63.76 REMARK 500 1 GLN A 170 38.52 -85.02 REMARK 500 1 ALA A 183 -159.67 -57.44 REMARK 500 1 SER A 207 35.01 -157.34 REMARK 500 1 ASP A 215 -2.53 89.30 REMARK 500 1 ALA A 222 11.67 46.76 REMARK 500 1 HIS B 315 -159.97 -97.69 REMARK 500 1 GLN B 351 -22.68 -38.33 REMARK 500 1 GLN B 357 157.44 -48.62 REMARK 500 1 ALA B 373 -76.03 -47.27 REMARK 500 2 LEU A 6 103.60 51.51 REMARK 500 2 LYS A 49 -73.43 -72.33 REMARK 500 2 ALA A 50 -34.70 -38.53 REMARK 500 2 GLU A 117 -17.92 -49.26 REMARK 500 2 ASP A 119 44.15 -93.94 REMARK 500 2 ASP A 148 113.91 62.62 REMARK 500 2 GLN A 170 39.75 -82.27 REMARK 500 2 ALA A 183 -172.14 -47.85 REMARK 500 2 SER A 207 38.36 -156.92 REMARK 500 2 ASP A 215 -0.03 82.59 REMARK 500 2 ALA A 222 16.14 45.71 REMARK 500 2 ASN A 230 70.17 68.55 REMARK 500 2 LYS A 250 42.55 -85.80 REMARK 500 2 LYS A 257 -172.23 45.94 REMARK 500 2 ASP A 258 -123.05 -150.72 REMARK 500 2 GLN B 351 -12.56 -43.16 REMARK 500 2 ALA B 373 -75.13 -46.61 REMARK 500 3 LEU A 6 96.41 54.94 REMARK 500 3 LYS A 49 -72.97 -63.50 REMARK 500 3 ALA A 50 -34.00 -37.88 REMARK 500 3 ASP A 119 41.51 -85.76 REMARK 500 3 ASP A 148 125.58 60.17 REMARK 500 3 ALA A 151 27.97 -79.72 REMARK 500 3 ASP A 162 146.48 -170.51 REMARK 500 3 GLN A 170 38.08 -86.99 REMARK 500 3 ALA A 183 -162.92 -55.37 REMARK 500 3 ASP A 215 10.72 83.53 REMARK 500 3 ALA A 222 15.80 48.89 REMARK 500 3 VAL A 223 -46.12 -132.19 REMARK 500 3 ASN A 230 69.92 69.25 REMARK 500 3 ALA A 254 6.94 48.39 REMARK 500 3 LYS A 255 8.46 49.52 REMARK 500 3 HIS B 315 -159.78 -96.54 REMARK 500 3 LYS B 327 -17.34 -49.96 REMARK 500 3 GLN B 351 -23.69 -38.37 REMARK 500 3 ALA B 373 -74.80 -50.18 REMARK 500 4 LEU A 6 103.93 51.02 REMARK 500 REMARK 500 THIS ENTRY HAS 698 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EZA RELATED DB: PDB REMARK 900 RESTRAINED REGULARIZED MEAN STRUCTURE REMARK 900 RELATED ID: 3EZE RELATED DB: PDB REMARK 900 RESTRAINED REGULARIZED MEAN STRUCTURE OF THE TRANSITION STATE DBREF 3EZB A 1 259 UNP P08839 PT1_ECOLI 1 259 DBREF 3EZB B 301 385 UNP P0AA04 PTHP_ECOLI 1 85 SEQADV 3EZB ARG A 259 UNP P08839 LEU 259 CONFLICT SEQRES 1 A 259 MET ILE SER GLY ILE LEU ALA SER PRO GLY ILE ALA PHE SEQRES 2 A 259 GLY LYS ALA LEU LEU LEU LYS GLU ASP GLU ILE VAL ILE SEQRES 3 A 259 ASP ARG LYS LYS ILE SER ALA ASP GLN VAL ASP GLN GLU SEQRES 4 A 259 VAL GLU ARG PHE LEU SER GLY ARG ALA LYS ALA SER ALA SEQRES 5 A 259 GLN LEU GLU THR ILE LYS THR LYS ALA GLY GLU THR PHE SEQRES 6 A 259 GLY GLU GLU LYS GLU ALA ILE PHE GLU GLY HIS ILE MET SEQRES 7 A 259 LEU LEU GLU ASP GLU GLU LEU GLU GLN GLU ILE ILE ALA SEQRES 8 A 259 LEU ILE LYS ASP LYS HIS MET THR ALA ASP ALA ALA ALA SEQRES 9 A 259 HIS GLU VAL ILE GLU GLY GLN ALA SER ALA LEU GLU GLU SEQRES 10 A 259 LEU ASP ASP GLU TYR LEU LYS GLU ARG ALA ALA ASP VAL SEQRES 11 A 259 ARG ASP ILE GLY LYS ARG LEU LEU ARG ASN ILE LEU GLY SEQRES 12 A 259 LEU LYS ILE ILE ASP LEU SER ALA ILE GLN ASP GLU VAL SEQRES 13 A 259 ILE LEU VAL ALA ALA ASP LEU THR PRO SER GLU THR ALA SEQRES 14 A 259 GLN LEU ASN LEU LYS LYS VAL LEU GLY PHE ILE THR ASP SEQRES 15 A 259 ALA GLY GLY ARG THR SER HIS THR SER ILE MET ALA ARG SEQRES 16 A 259 SER LEU GLU LEU PRO ALA ILE VAL GLY THR GLY SER VAL SEQRES 17 A 259 THR SER GLN VAL LYS ASN ASP ASP TYR LEU ILE LEU ASP SEQRES 18 A 259 ALA VAL ASN ASN GLN VAL TYR VAL ASN PRO THR ASN GLU SEQRES 19 A 259 VAL ILE ASP LYS MET ARG ALA VAL GLN GLU GLN VAL ALA SEQRES 20 A 259 SER GLU LYS ALA GLU LEU ALA LYS LEU LYS ASP ARG SEQRES 1 B 85 MET PHE GLN GLN GLU VAL THR ILE THR ALA PRO ASN GLY SEQRES 2 B 85 LEU HIS THR ARG PRO ALA ALA GLN PHE VAL LYS GLU ALA SEQRES 3 B 85 LYS GLY PHE THR SER GLU ILE THR VAL THR SER ASN GLY SEQRES 4 B 85 LYS SER ALA SER ALA LYS SER LEU PHE LYS LEU GLN THR SEQRES 5 B 85 LEU GLY LEU THR GLN GLY THR VAL VAL THR ILE SER ALA SEQRES 6 B 85 GLU GLY GLU ASP GLU GLN LYS ALA VAL GLU HIS LEU VAL SEQRES 7 B 85 LYS LEU MET ALA GLU LEU GLU HELIX 1 1 ALA A 33 THR A 64 1 32 HELIX 2 2 GLU A 67 LEU A 80 1 14 HELIX 3 3 GLU A 83 LYS A 96 1 14 HELIX 4 4 ALA A 100 GLU A 116 1 17 HELIX 5 5 GLU A 121 LEU A 142 1 22 HELIX 6 6 LEU A 149 ALA A 151 5 3 HELIX 7 7 PRO A 165 ALA A 169 1 5 HELIX 8 8 HIS A 189 LEU A 197 1 9 HELIX 9 9 VAL A 208 GLN A 211 1 4 HELIX 10 10 ASN A 233 ALA A 251 1 19 HELIX 11 11 THR B 316 GLY B 328 1 13 HELIX 12 12 LEU B 347 THR B 352 1 6 HELIX 13 13 GLU B 370 GLU B 383 1 14 SHEET 1 A 5 PHE A 179 THR A 181 0 SHEET 2 A 5 ILE A 157 ALA A 160 1 N LEU A 158 O ILE A 180 SHEET 3 A 5 ALA A 12 LEU A 18 1 N LEU A 17 O ILE A 157 SHEET 4 A 5 ASP A 216 LEU A 220 -1 N LEU A 220 O ALA A 12 SHEET 5 A 5 VAL A 227 VAL A 229 -1 N TYR A 228 O ILE A 219 SHEET 1 B 4 PHE B 302 THR B 307 0 SHEET 2 B 4 VAL B 360 GLU B 366 -1 N ALA B 365 O PHE B 302 SHEET 3 B 4 GLU B 332 SER B 337 -1 N THR B 336 O THR B 362 SHEET 4 B 4 LYS B 340 SER B 343 -1 N ALA B 342 O VAL B 335 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1