HEADER OXIDOREDUCTASE 02-NOV-08 3F4R TITLE CRYSTAL STRUCTURE OF WOLBACHIA PIPIENTIS ALPHA-DSBA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-DSBA1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WOLBACHIA PIPIENTIS; SOURCE 3 ORGANISM_TAXID: 66077; SOURCE 4 STRAIN: WMEL; SOURCE 5 GENE: WD_1055; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET42A KEYWDS THIOREDOXIN-FOLD, DSBA, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KURZ,B.HERAS,J.L.MARTIN REVDAT 4 27-DEC-23 3F4R 1 REMARK SEQADV REVDAT 3 13-JUL-11 3F4R 1 VERSN REVDAT 2 09-JUN-09 3F4R 1 JRNL REMARK REVDAT 1 24-MAR-09 3F4R 0 JRNL AUTH M.KURZ,I.ITURBE-ORMAETXE,R.JARROTT,S.R.SHOULDICE, JRNL AUTH 2 M.A.WOUTERS,P.FREI,R.GLOCKSHUBER,S.L.O'NEILL,B.HERAS, JRNL AUTH 3 J.L.MARTIN JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE JRNL TITL 2 OXIDOREDUCTASE ALPHA-DSBA1 FROM WOLBACHIA PIPIENTIS JRNL REF ANTIOXID.REDOX SIGNAL. V. 11 1485 2009 JRNL REFN ISSN 1523-0864 JRNL PMID 19265485 JRNL DOI 10.1089/ARS.2008.2420 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 30405 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3022 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1740 - 4.4510 0.95 1295 131 0.1640 0.2210 REMARK 3 2 4.4510 - 3.5340 1.00 1308 148 0.1230 0.1390 REMARK 3 3 3.5340 - 3.0870 0.99 1283 152 0.1410 0.1470 REMARK 3 4 3.0870 - 2.8050 1.00 1295 152 0.1540 0.2050 REMARK 3 5 2.8050 - 2.6040 1.00 1279 149 0.1620 0.1670 REMARK 3 6 2.6040 - 2.4510 0.99 1301 140 0.1640 0.1880 REMARK 3 7 2.4510 - 2.3280 0.99 1289 142 0.1470 0.1990 REMARK 3 8 2.3280 - 2.2270 0.99 1282 131 0.1450 0.1850 REMARK 3 9 2.2270 - 2.1410 1.00 1305 130 0.1540 0.1860 REMARK 3 10 2.1410 - 2.0670 0.99 1268 128 0.1600 0.1640 REMARK 3 11 2.0670 - 2.0020 1.00 1313 135 0.1630 0.1960 REMARK 3 12 2.0020 - 1.9450 0.99 1273 148 0.1560 0.1870 REMARK 3 13 1.9450 - 1.8940 0.99 1251 147 0.1650 0.2100 REMARK 3 14 1.8940 - 1.8480 0.98 1267 141 0.1680 0.1980 REMARK 3 15 1.8480 - 1.8060 0.97 1218 153 0.1740 0.2230 REMARK 3 16 1.8060 - 1.7670 0.97 1272 137 0.1630 0.1990 REMARK 3 17 1.7670 - 1.7320 0.95 1201 140 0.1830 0.2270 REMARK 3 18 1.7320 - 1.6990 0.95 1231 116 0.1790 0.2180 REMARK 3 19 1.6990 - 1.6690 0.95 1199 144 0.1790 0.2170 REMARK 3 20 1.6690 - 1.6410 0.94 1213 138 0.1780 0.2210 REMARK 3 21 1.6410 - 1.6140 0.92 1141 136 0.1880 0.2370 REMARK 3 22 1.6140 - 1.6000 0.68 899 84 0.1890 0.2340 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 71.61 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.94600 REMARK 3 B22 (A**2) : 0.32900 REMARK 3 B33 (A**2) : 0.61700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.61700 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1879 REMARK 3 ANGLE : 1.344 2549 REMARK 3 CHIRALITY : 0.100 273 REMARK 3 PLANARITY : 0.008 327 REMARK 3 DIHEDRAL : 15.428 725 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 20:80 REMARK 3 ORIGIN FOR THE GROUP (A): 8.5139 4.8552 18.6924 REMARK 3 T TENSOR REMARK 3 T11: 0.1637 T22: 0.1802 REMARK 3 T33: 0.0833 T12: 0.0114 REMARK 3 T13: -0.0389 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.1145 L22: 0.9326 REMARK 3 L33: -0.0876 L12: 0.0740 REMARK 3 L13: -0.8740 L23: -0.5368 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: -0.2821 S13: 0.0412 REMARK 3 S21: 0.2408 S22: -0.0879 S23: -0.1133 REMARK 3 S31: -0.0356 S32: 0.1194 S33: 0.0812 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 81:166 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4928 5.0272 4.6428 REMARK 3 T TENSOR REMARK 3 T11: 0.1032 T22: 0.0687 REMARK 3 T33: 0.1370 T12: 0.0061 REMARK 3 T13: -0.0114 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.9051 L22: 0.9536 REMARK 3 L33: 0.7350 L12: -0.2252 REMARK 3 L13: -0.1680 L23: -0.0847 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: -0.0476 S13: 0.0053 REMARK 3 S21: 0.1042 S22: -0.0068 S23: -0.2031 REMARK 3 S31: 0.0582 S32: 0.0537 S33: 0.0230 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 167:218 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4627 -1.2279 24.7515 REMARK 3 T TENSOR REMARK 3 T11: 0.2873 T22: 0.3354 REMARK 3 T33: 0.1242 T12: -0.0039 REMARK 3 T13: -0.0148 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.1331 L22: 1.0533 REMARK 3 L33: -1.0036 L12: -0.0163 REMARK 3 L13: -0.0362 L23: -0.1132 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: -0.3592 S13: -0.0557 REMARK 3 S21: 0.3561 S22: -0.0720 S23: -0.0229 REMARK 3 S31: 0.0654 S32: -0.0241 S33: 0.0550 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 1000:1279 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6468 4.8239 11.6852 REMARK 3 T TENSOR REMARK 3 T11: 0.1609 T22: 0.1465 REMARK 3 T33: 0.1464 T12: 0.0096 REMARK 3 T13: -0.0244 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.0463 L22: 0.8965 REMARK 3 L33: 0.1256 L12: 0.1434 REMARK 3 L13: 0.2498 L23: -0.1234 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: -0.1465 S13: 0.1002 REMARK 3 S21: 0.1485 S22: -0.0121 S23: -0.1068 REMARK 3 S31: -0.0447 S32: -0.0002 S33: 0.0325 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESID 227 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8034 0.0506 0.5817 REMARK 3 T TENSOR REMARK 3 T11: 0.2435 T22: 0.2579 REMARK 3 T33: 0.3851 T12: 0.0191 REMARK 3 T13: -0.0222 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.7086 L22: 6.5001 REMARK 3 L33: 1.8817 L12: 1.8188 REMARK 3 L13: 2.4172 L23: 2.0362 REMARK 3 S TENSOR REMARK 3 S11: -0.2970 S12: -2.3229 S13: 0.9594 REMARK 3 S21: -0.7452 S22: -1.1205 S23: -1.8366 REMARK 3 S31: -0.5999 S32: -4.0300 S33: 1.4419 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND RESID 228 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9391 17.7655 8.3624 REMARK 3 T TENSOR REMARK 3 T11: 0.6591 T22: 0.2583 REMARK 3 T33: 0.7538 T12: -0.0275 REMARK 3 T13: 0.1478 T23: 0.1122 REMARK 3 L TENSOR REMARK 3 L11: 4.1708 L22: 1.9367 REMARK 3 L33: 0.0922 L12: -0.1561 REMARK 3 L13: 1.6927 L23: -0.2708 REMARK 3 S TENSOR REMARK 3 S11: 0.1474 S12: 0.0579 S13: 0.1070 REMARK 3 S21: 0.3879 S22: 0.1359 S23: 0.1965 REMARK 3 S31: -0.1232 S32: -0.0283 S33: -0.2492 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3F4R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050145. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-05; 19-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.5-5.9 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; ALS REMARK 200 BEAMLINE : 8.3.1; 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1159; 0.9796, 0.9797, 0.9537 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; ADSC QUANTUM REMARK 200 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31005 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.27700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M AMMONIUM CITRATE PH REMARK 280 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.70000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.70000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1240 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 VAL A 2 REMARK 465 LYS A 3 REMARK 465 GLN A 4 REMARK 465 ASP A 5 REMARK 465 LEU A 6 REMARK 465 SER A 7 REMARK 465 ASP A 8 REMARK 465 ASN A 9 REMARK 465 GLN A 10 REMARK 465 TYR A 11 REMARK 465 ILE A 12 REMARK 465 GLN A 13 REMARK 465 LYS A 14 REMARK 465 LYS A 15 REMARK 465 PRO A 16 REMARK 465 ASN A 17 REMARK 465 GLU A 18 REMARK 465 ILE A 19 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 38 CD CE NZ REMARK 480 GLU A 99 CG CD OE1 OE2 REMARK 480 LYS A 151 CD CE NZ REMARK 480 LYS A 166 CE NZ REMARK 480 LYS A 183 CE NZ REMARK 480 SER A 184 OG REMARK 480 GLU A 187 CG CD OE1 OE2 REMARK 480 LYS A 190 CD CE NZ REMARK 480 LYS A 200 CD CE NZ REMARK 480 LYS A 208 CD CE NZ REMARK 480 LYS A 212 CE NZ REMARK 480 LYS A 216 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 25 41.71 -93.23 REMARK 500 LEU A 25 41.71 -90.41 REMARK 500 THR A 170 -65.36 -125.14 REMARK 500 THR A 170 -79.39 -125.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 227 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 228 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F4S RELATED DB: PDB REMARK 900 THE SAME PROTEIN, T172V VARIANT REMARK 900 RELATED ID: 3F4T RELATED DB: PDB REMARK 900 THE SAME PROTEIN, C97A/C146A VARIANT DBREF 3F4R A 1 216 UNP Q73GA4 Q73GA4_WOLPM 19 234 SEQADV 3F4R LEU A 217 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R GLU A 218 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 219 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 220 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 221 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 222 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 223 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 224 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 225 UNP Q73GA4 EXPRESSION TAG SEQADV 3F4R HIS A 226 UNP Q73GA4 EXPRESSION TAG SEQRES 1 A 226 VAL VAL LYS GLN ASP LEU SER ASP ASN GLN TYR ILE GLN SEQRES 2 A 226 LYS LYS PRO ASN GLU ILE THR SER ASN GLU LEU LEU LEU SEQRES 3 A 226 PRO LEU PRO ASN ASP LYS LEU LEU GLY ASP PRO LYS ALA SEQRES 4 A 226 PRO ILE LEU MET ILE GLU TYR ALA SER LEU THR CYS TYR SEQRES 5 A 226 HIS CYS SER LEU PHE HIS ARG ASN VAL PHE PRO LYS ILE SEQRES 6 A 226 LYS GLU LYS TYR ILE ASP THR GLY LYS MET LEU TYR ILE SEQRES 7 A 226 PHE ARG HIS PHE PRO LEU ASP TYR ARG GLY LEU LYS ALA SEQRES 8 A 226 ALA MET LEU SER HIS CYS TYR GLU LYS GLN GLU ASP TYR SEQRES 9 A 226 PHE ASN PHE ASN LYS ALA VAL PHE ASN SER ILE ASP SER SEQRES 10 A 226 TRP ASN TYR TYR ASN LEU SER ASP LEU THR LEU LEU GLN SEQRES 11 A 226 ARG ILE ALA ALA LEU SER ASN LEU LYS GLN ASP ALA PHE SEQRES 12 A 226 ASN GLN CYS ILE ASN ASP LYS LYS ILE MET ASP LYS ILE SEQRES 13 A 226 VAL ASN ASP LYS SER LEU ALA ILE ASN LYS LEU GLY ILE SEQRES 14 A 226 THR ALA THR PRO ILE PHE PHE ILE LYS LEU ASN ASP ASP SEQRES 15 A 226 LYS SER TYR ILE GLU HIS ASN LYS VAL LYS HIS GLY GLY SEQRES 16 A 226 TYR LYS GLU LEU LYS TYR PHE THR ASN VAL ILE ASP LYS SEQRES 17 A 226 LEU TYR GLY LYS ALA ILE VAL LYS LEU GLU HIS HIS HIS SEQRES 18 A 226 HIS HIS HIS HIS HIS HET PGE A 227 10 HET 1PE A 228 16 HETNAM PGE TRIETHYLENE GLYCOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 2 PGE C6 H14 O4 FORMUL 3 1PE C10 H22 O6 FORMUL 4 HOH *264(H2 O) HELIX 1 1 THR A 20 LEU A 25 1 6 HELIX 2 2 CYS A 51 VAL A 61 1 11 HELIX 3 3 VAL A 61 ILE A 70 1 10 HELIX 4 4 ASP A 85 HIS A 96 1 12 HELIX 5 5 LYS A 100 SER A 114 1 15 HELIX 6 6 ILE A 115 TRP A 118 5 4 HELIX 7 7 LEU A 126 SER A 136 1 11 HELIX 8 8 LYS A 139 ASN A 148 1 10 HELIX 9 9 ASP A 149 GLY A 168 1 20 HELIX 10 10 GLU A 187 LYS A 190 5 4 HELIX 11 11 GLU A 198 GLU A 218 1 21 SHEET 1 A 5 LEU A 33 LEU A 34 0 SHEET 2 A 5 MET A 75 HIS A 81 -1 O TYR A 77 N LEU A 34 SHEET 3 A 5 ILE A 41 ALA A 47 1 N GLU A 45 O ARG A 80 SHEET 4 A 5 ILE A 174 LEU A 179 -1 O LYS A 178 N LEU A 42 SHEET 5 A 5 LYS A 192 GLY A 194 -1 O HIS A 193 N PHE A 175 SSBOND 1 CYS A 51 CYS A 54 1555 1555 2.02 SSBOND 2 CYS A 97 CYS A 146 1555 1555 2.04 CISPEP 1 THR A 172 PRO A 173 0 1.48 CISPEP 2 THR A 172 PRO A 173 0 0.70 SITE 1 AC1 6 CYS A 51 TYR A 52 HIS A 53 HOH A1238 SITE 2 AC1 6 HOH A1253 HOH A1254 SITE 1 AC2 9 TYR A 86 TYR A 98 ASP A 103 ASN A 106 SITE 2 AC2 9 PHE A 107 LEU A 135 SER A 136 HOH A1183 SITE 3 AC2 9 HOH A1218 CRYST1 71.400 49.600 69.700 90.00 107.00 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014006 0.000000 0.004282 0.00000 SCALE2 0.000000 0.020161 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015003 0.00000