HEADER TRANSFERASE 05-NOV-08 3F6D TITLE CRYSTAL STRUCTURE OF A GENETICALLY MODIFIED DELTA CLASS GST (ADGSTD4- TITLE 2 4) FROM ANOPHELES DIRUS, F123A, IN COMPLEX WITH S-HEXYL GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE GST1-4; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADGSTD4-4; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANOPHELES DIRUS; SOURCE 3 ORGANISM_TAXID: 7168; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS GLUTATHIONE TRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.WONGSANTICHON,R.C.ROBINSON,A.J.KETTERMAN REVDAT 6 01-NOV-23 3F6D 1 REMARK REVDAT 5 10-NOV-21 3F6D 1 REMARK SEQADV REVDAT 4 13-JUL-11 3F6D 1 VERSN REVDAT 3 12-MAY-10 3F6D 1 JRNL REVDAT 2 09-MAR-10 3F6D 1 JRNL REVDAT 1 27-OCT-09 3F6D 0 JRNL AUTH J.WONGSANTICHON,R.C.ROBINSON,A.J.KETTERMAN JRNL TITL STRUCTURAL CONTRIBUTIONS OF DELTA CLASS GLUTATHIONE JRNL TITL 2 TRANSFERASE ACTIVE-SITE RESIDUES TO CATALYSIS JRNL REF BIOCHEM.J. V. 428 25 2010 JRNL REFN ISSN 0264-6021 JRNL PMID 20196771 JRNL DOI 10.1042/BJ20091939 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 41408 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2190 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2619 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3376 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 321 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.59000 REMARK 3 B22 (A**2) : 0.59000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.30000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.612 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3509 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4757 ; 1.161 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 418 ; 5.297 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;36.396 ;23.371 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 550 ;12.240 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;15.652 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 500 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2746 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1842 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2469 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 283 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.189 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.160 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2144 ; 0.557 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3359 ; 0.868 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1549 ; 1.535 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1398 ; 2.446 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0918 21.1842 33.5842 REMARK 3 T TENSOR REMARK 3 T11: -0.1477 T22: -0.1999 REMARK 3 T33: -0.1921 T12: 0.0192 REMARK 3 T13: 0.0212 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 1.6372 L22: 1.5215 REMARK 3 L33: 2.1442 L12: -0.3400 REMARK 3 L13: -0.0319 L23: 0.0909 REMARK 3 S TENSOR REMARK 3 S11: 0.0862 S12: -0.0395 S13: 0.0300 REMARK 3 S21: 0.0780 S22: -0.0048 S23: 0.0091 REMARK 3 S31: -0.1215 S32: -0.1223 S33: -0.0814 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 119 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0080 21.0840 11.6348 REMARK 3 T TENSOR REMARK 3 T11: -0.1196 T22: -0.1138 REMARK 3 T33: -0.1745 T12: 0.0640 REMARK 3 T13: 0.0198 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.1239 L22: 2.5420 REMARK 3 L33: 3.4442 L12: -0.4260 REMARK 3 L13: 0.4761 L23: -1.1995 REMARK 3 S TENSOR REMARK 3 S11: 0.0487 S12: 0.2106 S13: 0.0310 REMARK 3 S21: -0.1809 S22: 0.0290 S23: 0.0735 REMARK 3 S31: -0.0568 S32: -0.2223 S33: -0.0777 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 130 B 213 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0265 13.7622 10.3274 REMARK 3 T TENSOR REMARK 3 T11: -0.0729 T22: -0.0189 REMARK 3 T33: -0.1158 T12: 0.1342 REMARK 3 T13: 0.0692 T23: 0.0280 REMARK 3 L TENSOR REMARK 3 L11: 3.6722 L22: 2.7910 REMARK 3 L33: 6.0231 L12: -0.0753 REMARK 3 L13: 0.2743 L23: -2.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.1413 S12: 0.3181 S13: 0.0117 REMARK 3 S21: -0.3948 S22: -0.3379 S23: -0.3248 REMARK 3 S31: 0.3979 S32: 0.8388 S33: 0.1966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3F6D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43657 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3F63 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% (W/V) PEG 4000, 0.1M SODIUM REMARK 280 CACODYLATE PH 6.6, 0.15M SODIUM ACETATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 181.96200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.98100 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.98100 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 181.96200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 219 REMARK 465 PRO B 120 REMARK 465 GLN B 121 REMARK 465 ILE B 122 REMARK 465 ALA B 123 REMARK 465 GLY B 124 REMARK 465 GLN B 125 REMARK 465 LYS B 126 REMARK 465 VAL B 127 REMARK 465 PRO B 128 REMARK 465 VAL B 129 REMARK 465 ARG B 214 REMARK 465 TYR B 215 REMARK 465 PHE B 216 REMARK 465 THR B 217 REMARK 465 GLN B 218 REMARK 465 LYS B 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 225 O HOH A 226 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 110.47 68.93 REMARK 500 TYR A 89 71.08 -156.80 REMARK 500 VAL A 109 -62.72 -126.65 REMARK 500 GLU B 65 109.04 68.47 REMARK 500 TYR B 89 70.91 -153.41 REMARK 500 VAL B 109 -61.89 -127.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTX A 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTX B 220 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F63 RELATED DB: PDB REMARK 900 THE WILD-TYPE PROTEIN COMPLEXED WITH S-HEXYL GLUTATHIONE DBREF 3F6D A 1 219 UNP Q9GN60 Q9GN60_9DIPT 1 219 DBREF 3F6D B 1 219 UNP Q9GN60 Q9GN60_9DIPT 1 219 SEQADV 3F6D ALA A 123 UNP Q9GN60 PHE 123 ENGINEERED MUTATION SEQADV 3F6D ALA B 123 UNP Q9GN60 PHE 123 ENGINEERED MUTATION SEQRES 1 A 219 MET ASP PHE TYR TYR LEU PRO GLY SER ALA PRO CYS ARG SEQRES 2 A 219 ALA VAL GLN MET THR ALA ALA ALA VAL GLY VAL GLU LEU SEQRES 3 A 219 ASN LEU LYS LEU THR ASN LEU MET ALA GLY GLU HIS MET SEQRES 4 A 219 LYS PRO GLU PHE LEU LYS LEU ASN PRO GLN HIS CYS ILE SEQRES 5 A 219 PRO THR LEU VAL ASP GLU ASP GLY PHE VAL LEU TRP GLU SEQRES 6 A 219 SER ARG ALA ILE GLN ILE TYR LEU VAL GLU LYS TYR GLY SEQRES 7 A 219 ALA HIS ASP ALA ASP LEU ALA GLU ARG LEU TYR PRO SER SEQRES 8 A 219 ASP PRO ARG ARG ARG ALA VAL VAL HIS GLN ARG LEU PHE SEQRES 9 A 219 PHE ASP VAL ALA VAL LEU TYR GLN ARG PHE ALA GLU TYR SEQRES 10 A 219 TYR TYR PRO GLN ILE ALA GLY GLN LYS VAL PRO VAL GLY SEQRES 11 A 219 ASP PRO GLY ARG LEU ARG SER MET GLU GLN ALA LEU GLU SEQRES 12 A 219 PHE LEU ASN THR PHE LEU GLU GLY GLU GLN TYR VAL ALA SEQRES 13 A 219 GLY GLY ASP ASP PRO THR ILE ALA ASP LEU SER ILE LEU SEQRES 14 A 219 ALA THR ILE ALA THR TYR GLU VAL ALA GLY TYR ASP LEU SEQRES 15 A 219 ARG ARG TYR GLU ASN VAL GLN ARG TRP TYR GLU ARG THR SEQRES 16 A 219 SER ALA ILE VAL PRO GLY ALA ASP LYS ASN VAL GLU GLY SEQRES 17 A 219 ALA LYS VAL PHE GLY ARG TYR PHE THR GLN LYS SEQRES 1 B 219 MET ASP PHE TYR TYR LEU PRO GLY SER ALA PRO CYS ARG SEQRES 2 B 219 ALA VAL GLN MET THR ALA ALA ALA VAL GLY VAL GLU LEU SEQRES 3 B 219 ASN LEU LYS LEU THR ASN LEU MET ALA GLY GLU HIS MET SEQRES 4 B 219 LYS PRO GLU PHE LEU LYS LEU ASN PRO GLN HIS CYS ILE SEQRES 5 B 219 PRO THR LEU VAL ASP GLU ASP GLY PHE VAL LEU TRP GLU SEQRES 6 B 219 SER ARG ALA ILE GLN ILE TYR LEU VAL GLU LYS TYR GLY SEQRES 7 B 219 ALA HIS ASP ALA ASP LEU ALA GLU ARG LEU TYR PRO SER SEQRES 8 B 219 ASP PRO ARG ARG ARG ALA VAL VAL HIS GLN ARG LEU PHE SEQRES 9 B 219 PHE ASP VAL ALA VAL LEU TYR GLN ARG PHE ALA GLU TYR SEQRES 10 B 219 TYR TYR PRO GLN ILE ALA GLY GLN LYS VAL PRO VAL GLY SEQRES 11 B 219 ASP PRO GLY ARG LEU ARG SER MET GLU GLN ALA LEU GLU SEQRES 12 B 219 PHE LEU ASN THR PHE LEU GLU GLY GLU GLN TYR VAL ALA SEQRES 13 B 219 GLY GLY ASP ASP PRO THR ILE ALA ASP LEU SER ILE LEU SEQRES 14 B 219 ALA THR ILE ALA THR TYR GLU VAL ALA GLY TYR ASP LEU SEQRES 15 B 219 ARG ARG TYR GLU ASN VAL GLN ARG TRP TYR GLU ARG THR SEQRES 16 B 219 SER ALA ILE VAL PRO GLY ALA ASP LYS ASN VAL GLU GLY SEQRES 17 B 219 ALA LYS VAL PHE GLY ARG TYR PHE THR GLN LYS HET GTX A 220 26 HET GTX B 220 26 HETNAM GTX S-HEXYLGLUTATHIONE FORMUL 3 GTX 2(C16 H30 N3 O6 S 1+) FORMUL 5 HOH *321(H2 O) HELIX 1 1 SER A 9 GLY A 23 1 15 HELIX 2 2 GLY A 36 MET A 39 5 4 HELIX 3 3 LYS A 40 ASN A 47 1 8 HELIX 4 4 GLU A 65 GLY A 78 1 14 HELIX 5 5 ASP A 81 TYR A 89 1 9 HELIX 6 6 ASP A 92 VAL A 109 1 18 HELIX 7 7 VAL A 109 ALA A 123 1 15 HELIX 8 8 ASP A 131 LEU A 149 1 19 HELIX 9 9 THR A 162 ALA A 178 1 17 HELIX 10 10 ASP A 181 ARG A 184 5 4 HELIX 11 11 TYR A 185 VAL A 199 1 15 HELIX 12 12 GLY A 201 GLY A 213 1 13 HELIX 13 13 ARG A 214 THR A 217 5 4 HELIX 14 14 SER B 9 GLY B 23 1 15 HELIX 15 15 GLY B 36 MET B 39 5 4 HELIX 16 16 LYS B 40 ASN B 47 1 8 HELIX 17 17 GLU B 65 TYR B 77 1 13 HELIX 18 18 GLY B 78 HIS B 80 5 3 HELIX 19 19 ASP B 81 TYR B 89 1 9 HELIX 20 20 ASP B 92 VAL B 109 1 18 HELIX 21 21 VAL B 109 TYR B 119 1 11 HELIX 22 22 ASP B 131 LEU B 149 1 19 HELIX 23 23 THR B 162 GLY B 179 1 18 HELIX 24 24 ASP B 181 ARG B 184 5 4 HELIX 25 25 TYR B 185 VAL B 199 1 15 HELIX 26 26 GLY B 201 GLY B 213 1 13 SHEET 1 A 4 ASN A 27 LEU A 30 0 SHEET 2 A 4 ASP A 2 TYR A 5 1 N PHE A 3 O LYS A 29 SHEET 3 A 4 THR A 54 VAL A 56 -1 O THR A 54 N TYR A 4 SHEET 4 A 4 VAL A 62 TRP A 64 -1 O LEU A 63 N LEU A 55 SHEET 1 B 4 ASN B 27 LEU B 30 0 SHEET 2 B 4 ASP B 2 TYR B 5 1 N PHE B 3 O LYS B 29 SHEET 3 B 4 THR B 54 VAL B 56 -1 O THR B 54 N TYR B 4 SHEET 4 B 4 VAL B 62 TRP B 64 -1 O LEU B 63 N LEU B 55 CISPEP 1 ILE A 52 PRO A 53 0 1.25 CISPEP 2 ILE B 52 PRO B 53 0 2.18 SITE 1 AC1 22 SER A 9 PRO A 11 LEU A 33 HIS A 50 SITE 2 AC1 22 CYS A 51 ILE A 52 PRO A 53 GLU A 65 SITE 3 AC1 22 SER A 66 ARG A 67 VAL A 107 TYR A 119 SITE 4 AC1 22 ALA A 123 TYR A 215 HOH A 245 HOH A 257 SITE 5 AC1 22 HOH A 279 HOH A 284 HOH A 288 HOH A 293 SITE 6 AC1 22 HOH A 380 HOH A 429 SITE 1 AC2 21 SER B 9 PRO B 11 LEU B 33 HIS B 50 SITE 2 AC2 21 CYS B 51 ILE B 52 PRO B 53 GLU B 65 SITE 3 AC2 21 SER B 66 ARG B 67 VAL B 107 PHE B 212 SITE 4 AC2 21 HOH B 230 HOH B 248 HOH B 250 HOH B 266 SITE 5 AC2 21 HOH B 300 HOH B 338 HOH B 353 HOH B 460 SITE 6 AC2 21 HOH B 480 CRYST1 49.692 49.692 272.943 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020124 0.011619 0.000000 0.00000 SCALE2 0.000000 0.023237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003664 0.00000