data_3FAD # _entry.id 3FAD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FAD pdb_00003fad 10.2210/pdb3fad/pdb RCSB RCSB050345 ? ? WWPDB D_1000050345 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1L34 'MUTANT R96H LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 1L63 'WILDTYPE T4 LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C7W 'MUTANT R96K LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C7Y 'Mutant R96A OF T4 LYSOZYME IN WILDTYPE BACKGROUND AT 298K' unspecified PDB 3C7Z 'MUTANT D89A/R96H LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C80 'MUTANT R96Y LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C81 'MUTANT K85A LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C82 'MUTANT K85A/R96H LYSOZYME AT ROOM' unspecified PDB 3C83 'MUTANT D89A LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C8Q 'MUTANT R96D LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C8R 'MUTANT R96G LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3C8S 'MUTANT R96E LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3CDO 'MUTANT R96V LYSOZYME AT LOW TEMPERATURE' unspecified PDB 3CDQ 'MUTANT R96S LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3CDR 'MUTANT R96Q LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3CDT 'MUTANT R96N LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3CDV 'MUTANT R96M LYSOZYME AT ROOM TEMPERATURE' unspecified PDB 3F8V 'R96H AT 1.08 ANG' unspecified PDB 3F9L 'D72A AT 1.19 ANG' unspecified PDB 3FA0 'WILD TYPE AT 1.09 ANG' unspecified PDB 3FI5 'R96W AT 1.73 ANG' unspecified # _pdbx_database_status.entry_id 3FAD _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-11-17 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mooers, B.H.M.' 1 'Matthews, B.W.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Evaluation at atomic resolution of the role of strain in destabilizing the temperature-sensitive T4 lysozyme mutant Arg 96 --> His.' 'Protein Sci.' 18 863 870 2009 PRCIEI US 0961-8368 0795 ? 19384984 10.1002/pro.93 1 'Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme.' 'Protein Sci.' 18 871 880 2009 PRCIEI US 0961-8368 0795 ? 19384988 10.1002/pro.94 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mooers, B.H.' 1 ? primary 'Tronrud, D.E.' 2 ? primary 'Matthews, B.W.' 3 ? 1 'Mooers, B.H.' 4 ? 1 'Baase, W.A.' 5 ? 1 'Wray, J.W.' 6 ? 1 'Matthews, B.W.' 7 ? # _cell.entry_id 3FAD _cell.length_a 60.211 _cell.length_b 60.211 _cell.length_c 97.091 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FAD _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 154 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Lysozyme 18599.410 1 3.2.1.17 D72A/R96H ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 4 water nat water 18.015 222 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lysis protein, Muramidase, Endolysin' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.3.2.1.17 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVAAAVRGILR NAKLKPVYDSLDAVRHCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YKNL ; _entity_poly.pdbx_seq_one_letter_code_can ;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVAAAVRGILR NAKLKPVYDSLDAVRHCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YKNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 ILE n 1 4 PHE n 1 5 GLU n 1 6 MET n 1 7 LEU n 1 8 ARG n 1 9 ILE n 1 10 ASP n 1 11 GLU n 1 12 GLY n 1 13 LEU n 1 14 ARG n 1 15 LEU n 1 16 LYS n 1 17 ILE n 1 18 TYR n 1 19 LYS n 1 20 ASP n 1 21 THR n 1 22 GLU n 1 23 GLY n 1 24 TYR n 1 25 TYR n 1 26 THR n 1 27 ILE n 1 28 GLY n 1 29 ILE n 1 30 GLY n 1 31 HIS n 1 32 LEU n 1 33 LEU n 1 34 THR n 1 35 LYS n 1 36 SER n 1 37 PRO n 1 38 SER n 1 39 LEU n 1 40 ASN n 1 41 ALA n 1 42 ALA n 1 43 LYS n 1 44 SER n 1 45 GLU n 1 46 LEU n 1 47 ASP n 1 48 LYS n 1 49 ALA n 1 50 ILE n 1 51 GLY n 1 52 ARG n 1 53 ASN n 1 54 CYS n 1 55 ASN n 1 56 GLY n 1 57 VAL n 1 58 ILE n 1 59 THR n 1 60 LYS n 1 61 ASP n 1 62 GLU n 1 63 ALA n 1 64 GLU n 1 65 LYS n 1 66 LEU n 1 67 PHE n 1 68 ASN n 1 69 GLN n 1 70 ASP n 1 71 VAL n 1 72 ALA n 1 73 ALA n 1 74 ALA n 1 75 VAL n 1 76 ARG n 1 77 GLY n 1 78 ILE n 1 79 LEU n 1 80 ARG n 1 81 ASN n 1 82 ALA n 1 83 LYS n 1 84 LEU n 1 85 LYS n 1 86 PRO n 1 87 VAL n 1 88 TYR n 1 89 ASP n 1 90 SER n 1 91 LEU n 1 92 ASP n 1 93 ALA n 1 94 VAL n 1 95 ARG n 1 96 HIS n 1 97 CYS n 1 98 ALA n 1 99 LEU n 1 100 ILE n 1 101 ASN n 1 102 MET n 1 103 VAL n 1 104 PHE n 1 105 GLN n 1 106 MET n 1 107 GLY n 1 108 GLU n 1 109 THR n 1 110 GLY n 1 111 VAL n 1 112 ALA n 1 113 GLY n 1 114 PHE n 1 115 THR n 1 116 ASN n 1 117 SER n 1 118 LEU n 1 119 ARG n 1 120 MET n 1 121 LEU n 1 122 GLN n 1 123 GLN n 1 124 LYS n 1 125 ARG n 1 126 TRP n 1 127 ASP n 1 128 GLU n 1 129 ALA n 1 130 ALA n 1 131 VAL n 1 132 ASN n 1 133 LEU n 1 134 ALA n 1 135 LYS n 1 136 SER n 1 137 ARG n 1 138 TRP n 1 139 TYR n 1 140 ASN n 1 141 GLN n 1 142 THR n 1 143 PRO n 1 144 ASN n 1 145 ARG n 1 146 ALA n 1 147 LYS n 1 148 ARG n 1 149 VAL n 1 150 ILE n 1 151 THR n 1 152 THR n 1 153 PHE n 1 154 ARG n 1 155 THR n 1 156 GLY n 1 157 THR n 1 158 TRP n 1 159 ASP n 1 160 ALA n 1 161 TYR n 1 162 LYS n 1 163 ASN n 1 164 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Bacteriophage T4' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'gene e' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage T4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain RR1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PHS1403 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code LYS_BPT4 _struct_ref.pdbx_db_accession P00720 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILR NAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YKNL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FAD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00720 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 164 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 164 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FAD ALA A 72 ? UNP P00720 ASP 72 'engineered mutation' 72 1 1 3FAD HIS A 96 ? UNP P00720 ARG 96 'engineered mutation' 96 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FAD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_percent_sol 54.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pH 6.7 _exptl_crystal_grow.pdbx_details '2 M Na/K Phospahte, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . _exptl_crystal_grow.temp_details ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 1999-11-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3FAD _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 4.0 _reflns.d_resolution_low 19.7 _reflns.d_resolution_high 1.20 _reflns.number_obs 62568 _reflns.number_all 63952 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 12.83 _reflns.B_iso_Wilson_estimate 14.66 _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.25 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.33 _reflns_shell.pdbx_Rsym_value 0.33 _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 7330 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3FAD _refine.ls_number_reflns_obs 58285 _refine.ls_number_reflns_all 63954 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.70 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.1474 _refine.ls_R_factor_all 0.1512 _refine.ls_R_factor_R_work 0.1468 _refine.ls_R_factor_R_free 0.1738 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 3168 _refine.ls_number_parameters 14355 _refine.ls_number_restraints 17953 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY 4.9%' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'AB INITIO' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3FAD _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 32 _refine_analyze.occupancy_sum_hydrogen 1233.40 _refine_analyze.occupancy_sum_non_hydrogen 1497.50 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1344 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 245 _refine_hist.number_atoms_total 1603 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 19.70 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.028 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0234 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.071 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.084 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.019 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.054 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.084 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.20 _refine_ls_shell.d_res_low 1.25 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 5557 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine.entry_id 3FAD _pdbx_refine.R_factor_all_no_cutoff 0.1512 _pdbx_refine.R_factor_obs_no_cutoff 0.1507 _pdbx_refine.free_R_factor_no_cutoff 0.1738 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 3168 _pdbx_refine.R_factor_all_4sig_cutoff 0.1474 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1468 _pdbx_refine.free_R_factor_4sig_cutoff 0.1692 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 4.9 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 2879 _pdbx_refine.number_reflns_obs_4sig_cutoff 58285 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FAD _struct.title 'Evaulaution at Atomic Resolution of the Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant Arg96-->His' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FAD _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Antimicrobial, Bacteriolytic enzyme, Glycosidase, Hydrolase, T4 lysozyme, bond angle strain, rotamer strain, temperature sensitive mutant ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 2 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLY A 12 ? ASN A 2 GLY A 12 1 ? 11 HELX_P HELX_P2 2 SER A 38 ? GLY A 51 ? SER A 38 GLY A 51 1 ? 14 HELX_P HELX_P3 3 THR A 59 ? ASN A 81 ? THR A 59 ASN A 81 1 ? 23 HELX_P HELX_P4 4 LYS A 83 ? LEU A 91 ? LYS A 83 LEU A 91 1 ? 9 HELX_P HELX_P5 5 ASP A 92 ? GLY A 107 ? ASP A 92 GLY A 107 1 ? 16 HELX_P HELX_P6 6 GLY A 107 ? GLY A 113 ? GLY A 107 GLY A 113 1 ? 7 HELX_P HELX_P7 7 PHE A 114 ? GLN A 123 ? PHE A 114 GLN A 123 1 ? 10 HELX_P HELX_P8 8 ARG A 125 ? LYS A 135 ? ARG A 125 LYS A 135 1 ? 11 HELX_P HELX_P9 9 SER A 136 ? THR A 142 ? SER A 136 THR A 142 1 ? 7 HELX_P HELX_P10 10 THR A 142 ? GLY A 156 ? THR A 142 GLY A 156 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 14 ? LYS A 19 ? ARG A 14 LYS A 19 A 2 TYR A 25 ? GLY A 28 ? TYR A 25 GLY A 28 A 3 HIS A 31 ? LEU A 32 ? HIS A 31 LEU A 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 18 ? N TYR A 18 O THR A 26 ? O THR A 26 A 2 3 N ILE A 27 ? N ILE A 27 O HIS A 31 ? O HIS A 31 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 165 ? 9 'BINDING SITE FOR RESIDUE PO4 A 165' AC2 Software A BME 166 ? 4 'BINDING SITE FOR RESIDUE BME A 166' AC3 Software A PO4 167 ? 4 'BINDING SITE FOR RESIDUE PO4 A 167' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG A 14 ? ARG A 14 . ? 4_545 ? 2 AC1 9 LYS A 19 ? LYS A 19 . ? 4_545 ? 3 AC1 9 ARG A 125 ? ARG A 125 . ? 1_555 ? 4 AC1 9 TRP A 126 ? TRP A 126 . ? 1_555 ? 5 AC1 9 ASP A 127 ? ASP A 127 . ? 1_555 ? 6 AC1 9 GLU A 128 ? GLU A 128 . ? 1_555 ? 7 AC1 9 HOH E . ? HOH A 192 . ? 4_545 ? 8 AC1 9 HOH E . ? HOH A 247 . ? 4_545 ? 9 AC1 9 HOH E . ? HOH A 358 . ? 1_555 ? 10 AC2 4 VAL A 75 ? VAL A 75 . ? 1_555 ? 11 AC2 4 LEU A 79 ? LEU A 79 . ? 1_555 ? 12 AC2 4 HOH E . ? HOH A 490 . ? 1_555 ? 13 AC2 4 HOH E . ? HOH A 499 . ? 5_555 ? 14 AC3 4 ARG A 76 ? ARG A 76 . ? 1_555 ? 15 AC3 4 ARG A 80 ? ARG A 80 . ? 1_555 ? 16 AC3 4 LYS A 85 ? LYS A 85 . ? 5_555 ? 17 AC3 4 HOH E . ? HOH A 516 . ? 1_555 ? # _atom_sites.entry_id 3FAD _atom_sites.fract_transf_matrix[1][1] 0.016608 _atom_sites.fract_transf_matrix[1][2] 0.009589 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019178 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010300 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 MET 6 6 6 MET MET A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 CYS 97 97 97 CYS CYS A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 MET 106 106 106 MET MET A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 ARG 154 154 154 ARG ARG A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 TRP 158 158 158 TRP TRP A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 LEU 164 164 164 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 165 165 PO4 PO4 A . C 3 BME 1 166 166 BME BME A . D 2 PO4 1 167 167 PO4 PO4 A . E 4 HOH 1 169 169 HOH HOH A . E 4 HOH 2 170 170 HOH HOH A . E 4 HOH 3 171 171 HOH HOH A . E 4 HOH 4 175 175 HOH HOH A . E 4 HOH 5 176 176 HOH HOH A . E 4 HOH 6 177 177 HOH HOH A . E 4 HOH 7 179 179 HOH HOH A . E 4 HOH 8 180 180 HOH HOH A . E 4 HOH 9 181 181 HOH HOH A . E 4 HOH 10 182 182 HOH HOH A . E 4 HOH 11 183 183 HOH HOH A . E 4 HOH 12 184 184 HOH HOH A . E 4 HOH 13 187 187 HOH HOH A . E 4 HOH 14 188 188 HOH HOH A . E 4 HOH 15 189 189 HOH HOH A . E 4 HOH 16 190 190 HOH HOH A . E 4 HOH 17 191 191 HOH HOH A . E 4 HOH 18 192 192 HOH HOH A . E 4 HOH 19 193 193 HOH HOH A . E 4 HOH 20 194 194 HOH HOH A . E 4 HOH 21 196 196 HOH HOH A . E 4 HOH 22 197 197 HOH HOH A . E 4 HOH 23 200 200 HOH HOH A . E 4 HOH 24 201 201 HOH HOH A . E 4 HOH 25 202 202 HOH HOH A . E 4 HOH 26 203 203 HOH HOH A . E 4 HOH 27 204 204 HOH HOH A . E 4 HOH 28 206 206 HOH HOH A . E 4 HOH 29 207 207 HOH HOH A . E 4 HOH 30 208 208 HOH HOH A . E 4 HOH 31 209 209 HOH HOH A . E 4 HOH 32 210 210 HOH HOH A . E 4 HOH 33 211 211 HOH HOH A . E 4 HOH 34 213 213 HOH HOH A . E 4 HOH 35 214 214 HOH HOH A . E 4 HOH 36 215 215 HOH HOH A . E 4 HOH 37 216 216 HOH HOH A . E 4 HOH 38 217 217 HOH HOH A . E 4 HOH 39 218 218 HOH HOH A . E 4 HOH 40 219 219 HOH HOH A . E 4 HOH 41 220 220 HOH HOH A . E 4 HOH 42 221 221 HOH HOH A . E 4 HOH 43 222 222 HOH HOH A . E 4 HOH 44 223 223 HOH HOH A . E 4 HOH 45 224 224 HOH HOH A . E 4 HOH 46 227 227 HOH HOH A . E 4 HOH 47 228 228 HOH HOH A . E 4 HOH 48 230 230 HOH HOH A . E 4 HOH 49 231 231 HOH HOH A . E 4 HOH 50 232 232 HOH HOH A . E 4 HOH 51 233 233 HOH HOH A . E 4 HOH 52 236 236 HOH HOH A . E 4 HOH 53 238 238 HOH HOH A . E 4 HOH 54 239 239 HOH HOH A . E 4 HOH 55 240 240 HOH HOH A . E 4 HOH 56 242 242 HOH HOH A . E 4 HOH 57 243 243 HOH HOH A . E 4 HOH 58 244 244 HOH HOH A . E 4 HOH 59 245 245 HOH HOH A . E 4 HOH 60 246 246 HOH HOH A . E 4 HOH 61 247 247 HOH HOH A . E 4 HOH 62 248 248 HOH HOH A . E 4 HOH 63 249 249 HOH HOH A . E 4 HOH 64 250 250 HOH HOH A . E 4 HOH 65 251 251 HOH HOH A . E 4 HOH 66 252 252 HOH HOH A . E 4 HOH 67 253 253 HOH HOH A . E 4 HOH 68 254 254 HOH HOH A . E 4 HOH 69 256 256 HOH HOH A . E 4 HOH 70 257 257 HOH HOH A . E 4 HOH 71 258 258 HOH HOH A . E 4 HOH 72 259 259 HOH HOH A . E 4 HOH 73 260 260 HOH HOH A . E 4 HOH 74 261 261 HOH HOH A . E 4 HOH 75 264 264 HOH HOH A . E 4 HOH 76 265 265 HOH HOH A . E 4 HOH 77 268 268 HOH HOH A . E 4 HOH 78 269 269 HOH HOH A . E 4 HOH 79 270 270 HOH HOH A . E 4 HOH 80 271 271 HOH HOH A . E 4 HOH 81 273 273 HOH HOH A . E 4 HOH 82 274 274 HOH HOH A . E 4 HOH 83 276 276 HOH HOH A . E 4 HOH 84 277 277 HOH HOH A . E 4 HOH 85 279 279 HOH HOH A . E 4 HOH 86 280 280 HOH HOH A . E 4 HOH 87 282 282 HOH HOH A . E 4 HOH 88 283 283 HOH HOH A . E 4 HOH 89 284 284 HOH HOH A . E 4 HOH 90 288 288 HOH HOH A . E 4 HOH 91 289 289 HOH HOH A . E 4 HOH 92 290 290 HOH HOH A . E 4 HOH 93 291 291 HOH HOH A . E 4 HOH 94 292 292 HOH HOH A . E 4 HOH 95 294 294 HOH HOH A . E 4 HOH 96 296 296 HOH HOH A . E 4 HOH 97 298 298 HOH HOH A . E 4 HOH 98 299 299 HOH HOH A . E 4 HOH 99 300 300 HOH HOH A . E 4 HOH 100 303 303 HOH HOH A . E 4 HOH 101 304 304 HOH HOH A . E 4 HOH 102 305 305 HOH HOH A . E 4 HOH 103 306 306 HOH HOH A . E 4 HOH 104 307 307 HOH HOH A . E 4 HOH 105 308 308 HOH HOH A . E 4 HOH 106 309 309 HOH HOH A . E 4 HOH 107 316 316 HOH HOH A . E 4 HOH 108 317 317 HOH HOH A . E 4 HOH 109 318 318 HOH HOH A . E 4 HOH 110 319 319 HOH HOH A . E 4 HOH 111 320 320 HOH HOH A . E 4 HOH 112 321 321 HOH HOH A . E 4 HOH 113 322 322 HOH HOH A . E 4 HOH 114 324 324 HOH HOH A . E 4 HOH 115 326 326 HOH HOH A . E 4 HOH 116 327 327 HOH HOH A . E 4 HOH 117 328 328 HOH HOH A . E 4 HOH 118 329 329 HOH HOH A . E 4 HOH 119 331 331 HOH HOH A . E 4 HOH 120 332 332 HOH HOH A . E 4 HOH 121 333 333 HOH HOH A . E 4 HOH 122 334 334 HOH HOH A . E 4 HOH 123 335 335 HOH HOH A . E 4 HOH 124 336 336 HOH HOH A . E 4 HOH 125 337 337 HOH HOH A . E 4 HOH 126 338 338 HOH HOH A . E 4 HOH 127 340 340 HOH HOH A . E 4 HOH 128 341 341 HOH HOH A . E 4 HOH 129 345 345 HOH HOH A . E 4 HOH 130 347 347 HOH HOH A . E 4 HOH 131 348 348 HOH HOH A . E 4 HOH 132 350 350 HOH HOH A . E 4 HOH 133 351 351 HOH HOH A . E 4 HOH 134 352 352 HOH HOH A . E 4 HOH 135 354 354 HOH HOH A . E 4 HOH 136 355 355 HOH HOH A . E 4 HOH 137 358 358 HOH HOH A . E 4 HOH 138 359 359 HOH HOH A . E 4 HOH 139 362 362 HOH HOH A . E 4 HOH 140 365 365 HOH HOH A . E 4 HOH 141 367 367 HOH HOH A . E 4 HOH 142 370 370 HOH HOH A . E 4 HOH 143 371 371 HOH HOH A . E 4 HOH 144 372 372 HOH HOH A . E 4 HOH 145 374 374 HOH HOH A . E 4 HOH 146 376 376 HOH HOH A . E 4 HOH 147 378 378 HOH HOH A . E 4 HOH 148 379 379 HOH HOH A . E 4 HOH 149 380 380 HOH HOH A . E 4 HOH 150 382 382 HOH HOH A . E 4 HOH 151 384 384 HOH HOH A . E 4 HOH 152 388 388 HOH HOH A . E 4 HOH 153 393 393 HOH HOH A . E 4 HOH 154 394 394 HOH HOH A . E 4 HOH 155 396 396 HOH HOH A . E 4 HOH 156 397 397 HOH HOH A . E 4 HOH 157 398 398 HOH HOH A . E 4 HOH 158 399 399 HOH HOH A . E 4 HOH 159 400 400 HOH HOH A . E 4 HOH 160 401 401 HOH HOH A . E 4 HOH 161 402 402 HOH HOH A . E 4 HOH 162 403 403 HOH HOH A . E 4 HOH 163 404 404 HOH HOH A . E 4 HOH 164 406 406 HOH HOH A . E 4 HOH 165 411 411 HOH HOH A . E 4 HOH 166 413 413 HOH HOH A . E 4 HOH 167 414 414 HOH HOH A . E 4 HOH 168 415 415 HOH HOH A . E 4 HOH 169 417 417 HOH HOH A . E 4 HOH 170 419 419 HOH HOH A . E 4 HOH 171 422 422 HOH HOH A . E 4 HOH 172 423 423 HOH HOH A . E 4 HOH 173 425 425 HOH HOH A . E 4 HOH 174 429 429 HOH HOH A . E 4 HOH 175 430 430 HOH HOH A . E 4 HOH 176 436 436 HOH HOH A . E 4 HOH 177 437 437 HOH HOH A . E 4 HOH 178 441 441 HOH HOH A . E 4 HOH 179 442 442 HOH HOH A . E 4 HOH 180 444 444 HOH HOH A . E 4 HOH 181 448 448 HOH HOH A . E 4 HOH 182 449 449 HOH HOH A . E 4 HOH 183 460 460 HOH HOH A . E 4 HOH 184 464 464 HOH HOH A . E 4 HOH 185 469 469 HOH HOH A . E 4 HOH 186 478 478 HOH HOH A . E 4 HOH 187 483 483 HOH HOH A . E 4 HOH 188 486 486 HOH HOH A . E 4 HOH 189 487 487 HOH HOH A . E 4 HOH 190 488 488 HOH HOH A . E 4 HOH 191 489 489 HOH HOH A . E 4 HOH 192 490 490 HOH HOH A . E 4 HOH 193 496 496 HOH HOH A . E 4 HOH 194 497 497 HOH HOH A . E 4 HOH 195 498 498 HOH HOH A . E 4 HOH 196 499 499 HOH HOH A . E 4 HOH 197 500 500 HOH HOH A . E 4 HOH 198 501 501 HOH HOH A . E 4 HOH 199 502 502 HOH HOH A . E 4 HOH 200 503 503 HOH HOH A . E 4 HOH 201 505 505 HOH HOH A . E 4 HOH 202 506 506 HOH HOH A . E 4 HOH 203 507 507 HOH HOH A . E 4 HOH 204 509 509 HOH HOH A . E 4 HOH 205 511 511 HOH HOH A . E 4 HOH 206 513 513 HOH HOH A . E 4 HOH 207 514 514 HOH HOH A . E 4 HOH 208 515 515 HOH HOH A . E 4 HOH 209 516 516 HOH HOH A . E 4 HOH 210 519 519 HOH HOH A . E 4 HOH 211 523 523 HOH HOH A . E 4 HOH 212 524 524 HOH HOH A . E 4 HOH 213 526 526 HOH HOH A . E 4 HOH 214 527 527 HOH HOH A . E 4 HOH 215 529 529 HOH HOH A . E 4 HOH 216 531 531 HOH HOH A . E 4 HOH 217 532 532 HOH HOH A . E 4 HOH 218 541 541 HOH HOH A . E 4 HOH 219 542 542 HOH HOH A . E 4 HOH 220 543 543 HOH HOH A . E 4 HOH 221 545 545 HOH HOH A . E 4 HOH 222 548 548 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2680 ? 2 MORE -28 ? 2 'SSA (A^2)' 15780 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 32.3636666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 SHELX 'model building' . ? 2 SHELXL-97 refinement . ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 SHELX phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 29 ? ? -102.47 72.76 2 1 ASN A 55 ? A 34.12 56.09 3 1 PHE A 114 ? ? -78.96 47.19 4 1 ASN A 163 ? ? 110.56 -8.95 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A CYS 54 ? N A A CYS 54 N 2 1 Y 0 A CYS 54 ? CA A A CYS 54 CA 3 1 Y 0 A CYS 54 ? C A A CYS 54 C 4 1 Y 0 A CYS 54 ? O A A CYS 54 O 5 1 Y 0 A CYS 54 ? CB A A CYS 54 CB 6 1 Y 0 A CYS 54 ? SG A A CYS 54 SG 7 1 Y 0 A ASN 68 ? N A A ASN 68 N 8 1 Y 0 A ASN 68 ? CA A A ASN 68 CA 9 1 Y 0 A ASN 68 ? C A A ASN 68 C 10 1 Y 0 A ASN 68 ? O A A ASN 68 O 11 1 Y 0 A ASN 68 ? CB A A ASN 68 CB 12 1 Y 0 A ASN 68 ? CG A A ASN 68 CG 13 1 Y 0 A ASN 68 ? OD1 A A ASN 68 OD1 14 1 Y 0 A ASN 68 ? ND2 A A ASN 68 ND2 15 1 Y 1 A LYS 162 ? CG ? A LYS 162 CG 16 1 Y 1 A LYS 162 ? CD ? A LYS 162 CD 17 1 Y 1 A LYS 162 ? CE ? A LYS 162 CE 18 1 Y 1 A LYS 162 ? NZ ? A LYS 162 NZ 19 1 Y 1 A ASN 163 ? CG ? A ASN 163 CG 20 1 Y 1 A ASN 163 ? OD1 ? A ASN 163 OD1 21 1 Y 1 A ASN 163 ? ND2 ? A ASN 163 ND2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 BETA-MERCAPTOETHANOL BME 4 water HOH #