HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-NOV-08 3FBQ TITLE THE CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN PROTEIN FROM BACILLUS TITLE 2 ANTHRACIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED DOMAIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX,ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 260799; SOURCE 5 STRAIN: STR. STERNE; SOURCE 6 GENE: BAS1627, BA_1754, GBAA1754, GI:49178568; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS CONSERVED DOMAIN PROTEIN, BACILLUS ANTHRACIS, STRUCTURAL GENOMICS, KEYWDS 2 PSI2, MCSG, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,G.JOACHIMIAK,Y.KIM,P.GORNICKI,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 27-DEC-23 3FBQ 1 REMARK REVDAT 2 13-JUL-11 3FBQ 1 VERSN REVDAT 1 23-DEC-08 3FBQ 0 JRNL AUTH R.ZHANG,G.JOACHIMIAK,Y.KIM,P.GORNICKI,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN PROTEIN FROM JRNL TITL 2 BACILLUS ANTHRACIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0054 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 9226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 642 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.4720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2222 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 52.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.790 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.385 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.280 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.511 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.866 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2257 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3035 ; 2.556 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ;11.877 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;44.788 ;25.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 428 ;24.844 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.404 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 334 ; 0.211 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1672 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1393 ; 0.953 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2250 ; 1.818 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 864 ; 2.906 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 785 ; 4.822 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 7 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 50 REMARK 3 RESIDUE RANGE : A 51 A 100 REMARK 3 RESIDUE RANGE : A 101 A 150 REMARK 3 RESIDUE RANGE : A 151 A 200 REMARK 3 RESIDUE RANGE : A 201 A 250 REMARK 3 RESIDUE RANGE : A 256 A 279 REMARK 3 RESIDUE RANGE : A 280 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5790 -0.3170 26.5420 REMARK 3 T TENSOR REMARK 3 T11: 0.2090 T22: 0.1039 REMARK 3 T33: 0.0707 T12: 0.0539 REMARK 3 T13: -0.0015 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.8247 L22: 1.2852 REMARK 3 L33: 1.3958 L12: -0.3750 REMARK 3 L13: -0.1159 L23: -0.7066 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.0783 S13: 0.0560 REMARK 3 S21: -0.1088 S22: -0.0617 S23: -0.0536 REMARK 3 S31: 0.3130 S32: 0.1214 S33: 0.0623 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794, 0.9796 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9226 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 71.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 0.79500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)2SO4, 0.1M TRIS AND 0.2M REMARK 280 LI2SO4, PH 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 50.70300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.70300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.70300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.70300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.70300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.70300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 50.70300 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 50.70300 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 50.70300 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 50.70300 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 50.70300 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 50.70300 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 50.70300 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 50.70300 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 50.70300 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 50.70300 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 50.70300 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 50.70300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN EXISTED AS TRIMER. THE SECOND AND THIRD PART REMARK 300 OF THE BIOLOGICAL ARE GENARATED BY THE THREE FOLD AXIS: Z,X,Y AND Y, REMARK 300 Z,X REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 3 REMARK 465 HIS A 251 REMARK 465 THR A 252 REMARK 465 PRO A 253 REMARK 465 GLU A 254 REMARK 465 ASN A 255 REMARK 465 LYS A 292 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD2 LEU A 31 OE1 GLU A 260 2555 1.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 31 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 HIS A 82 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 PRO A 272 C - N - CD ANGL. DEV. = -42.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 5 -117.48 51.07 REMARK 500 ASN A 45 -90.76 -80.14 REMARK 500 GLN A 64 143.42 164.74 REMARK 500 HIS A 82 -87.89 -84.92 REMARK 500 LYS A 159 -109.93 -173.19 REMARK 500 GLU A 160 13.41 -64.89 REMARK 500 ILE A 162 97.00 179.81 REMARK 500 GLU A 167 -46.99 -137.77 REMARK 500 ASP A 204 -1.27 -54.50 REMARK 500 TYR A 222 -51.06 -122.99 REMARK 500 GLN A 231 151.90 -46.94 REMARK 500 LYS A 232 107.79 -33.11 REMARK 500 VAL A 259 172.16 175.25 REMARK 500 GLU A 266 119.78 144.22 REMARK 500 ASP A 284 -129.29 -149.98 REMARK 500 ASP A 285 111.93 162.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 4 ILE A 5 -136.69 REMARK 500 ASN A 15 GLY A 16 -33.10 REMARK 500 GLY A 16 ARG A 17 149.95 REMARK 500 ASP A 50 GLY A 51 -147.71 REMARK 500 GLU A 63 GLN A 64 -140.85 REMARK 500 LYS A 130 LYS A 131 -145.88 REMARK 500 GLY A 161 ILE A 162 -110.92 REMARK 500 ILE A 162 LYS A 163 -140.90 REMARK 500 ASP A 204 LEU A 205 -124.35 REMARK 500 HIS A 256 GLY A 257 -134.26 REMARK 500 GLY A 257 GLY A 258 135.01 REMARK 500 GLY A 258 VAL A 259 -144.78 REMARK 500 ASN A 263 GLY A 264 -139.37 REMARK 500 GLY A 264 LYS A 265 -45.47 REMARK 500 LYS A 277 LYS A 278 -135.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC89528 RELATED DB: TARGETDB DBREF 3FBQ A 1 292 UNP Q81SB1 Q81SB1_BACAN 75 366 SEQRES 1 A 292 GLY GLY LEU PRO ILE VAL GLY ASP ILE PHE ARG PHE LEU SEQRES 2 A 292 ASP ASN GLY ARG THR GLY LEU TYR GLU ASN TYR LYS GLU SEQRES 3 A 292 PHE SER THR GLU LEU ASN MET THR ARG GLU SER ASN GLY SEQRES 4 A 292 VAL LYS VAL THR ILE ASN ASP VAL ILE SER ASP GLY ARG SEQRES 5 A 292 THR LEU SER ILE THR TYR SER LEU GLU SER GLU GLN ASP SEQRES 6 A 292 LEU GLY ASP ASP PRO ILE ILE LEU GLY GLY LEU ASP ILE SEQRES 7 A 292 MET ASP ALA HIS GLY SER SER GLY SER GLY LYS MET THR SEQRES 8 A 292 LYS VAL THR GLU LYS LYS TYR VAL GLY MET VAL THR THR SEQRES 9 A 292 THR HIS HIS ASP SER ASN LYS LYS ASP LYS VAL ASN PHE SEQRES 10 A 292 ARG TRP ASN ILE GLU GLY ILE GLU ILE PRO ASP ARG LYS SEQRES 11 A 292 LYS SER ILE GLN GLY HIS TRP ASN PHE ALA LEU THR VAL SEQRES 12 A 292 LYS SER MET ASP SER LYS GLU ARG THR ILE GLY GLY SER SEQRES 13 A 292 SER GLU LYS GLU GLY ILE LYS ALA ASN MET GLU LYS VAL SEQRES 14 A 292 ALA MET SER PRO VAL SER PHE ILE LEU TYR TYR ASN GLN SEQRES 15 A 292 GLU VAL SER LYS GLY ALA ARG LYS GLU TRP ASP SER VAL SEQRES 16 A 292 ASP VAL GLU LEU THR VAL LYS ASP ASP LEU GLY ASN ASP SEQRES 17 A 292 TYR SER GLY GLU GLY ASN GLY GLY SER GLY ASN ASP PRO SEQRES 18 A 292 TYR ASN ILE ARG TRP SER ALA THR PHE GLN LYS LEU ASN SEQRES 19 A 292 GLU ASN ALA THR LYS LEU ILE VAL THR PRO ARG VAL HIS SEQRES 20 A 292 LEU ARG VAL HIS THR PRO GLU ASN HIS GLY GLY VAL GLU SEQRES 21 A 292 TYR VAL ASN GLY LYS GLU LYS LYS ILE GLU VAL PRO ASN SEQRES 22 A 292 LYS GLU ALA LYS LYS LYS ASP ILE VAL LEU ASP ASP ILE SEQRES 23 A 292 VAL ILE ASP LEU LYS LYS FORMUL 2 HOH *27(H2 O) HELIX 1 1 ASP A 8 LEU A 13 1 6 HELIX 2 2 GLY A 19 GLU A 22 5 4 HELIX 3 3 ASN A 23 SER A 28 1 6 HELIX 4 4 SER A 185 TRP A 192 1 8 SHEET 1 A 5 THR A 29 SER A 37 0 SHEET 2 A 5 VAL A 40 SER A 49 -1 O VAL A 47 N THR A 29 SHEET 3 A 5 THR A 53 SER A 62 -1 O SER A 55 N ILE A 48 SHEET 4 A 5 LYS A 97 HIS A 106 -1 O THR A 104 N LEU A 54 SHEET 5 A 5 SER A 84 THR A 94 -1 N SER A 85 O THR A 105 SHEET 1 B 3 ILE A 71 ILE A 78 0 SHEET 2 B 3 LYS A 114 ILE A 126 -1 O GLU A 122 N LEU A 73 SHEET 3 B 3 LYS A 131 LYS A 144 -1 O LYS A 131 N ILE A 126 SHEET 1 C 3 LYS A 149 THR A 152 0 SHEET 2 C 3 ILE A 162 MET A 171 -1 O VAL A 169 N ARG A 151 SHEET 3 C 3 SER A 156 SER A 157 -1 N SER A 157 O ALA A 164 SHEET 1 D 5 LYS A 149 THR A 152 0 SHEET 2 D 5 ILE A 162 MET A 171 -1 O VAL A 169 N ARG A 151 SHEET 3 D 5 SER A 175 VAL A 184 -1 O ILE A 177 N ALA A 170 SHEET 4 D 5 ILE A 224 GLN A 231 -1 O TRP A 226 N TYR A 180 SHEET 5 D 5 GLY A 211 GLY A 218 -1 N SER A 217 O ARG A 225 SHEET 1 E 4 ASP A 208 TYR A 209 0 SHEET 2 E 4 ASP A 196 ASP A 203 -1 N VAL A 201 O TYR A 209 SHEET 3 E 4 LYS A 239 HIS A 247 -1 O ARG A 245 N GLU A 198 SHEET 4 E 4 ILE A 281 VAL A 282 -1 O VAL A 282 N VAL A 246 SHEET 1 F 4 ASP A 208 TYR A 209 0 SHEET 2 F 4 ASP A 196 ASP A 203 -1 N VAL A 201 O TYR A 209 SHEET 3 F 4 LYS A 239 HIS A 247 -1 O ARG A 245 N GLU A 198 SHEET 4 F 4 ILE A 286 ASP A 289 -1 O ILE A 286 N VAL A 242 CISPEP 1 GLU A 266 LYS A 267 0 13.10 CISPEP 2 PRO A 272 ASN A 273 0 -3.08 CRYST1 101.406 101.406 101.406 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009861 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009861 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009861 0.00000