data_3FDI # _entry.id 3FDI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FDI pdb_00003fdi 10.2210/pdb3fdi/pdb RCSB RCSB050454 ? ? WWPDB D_1000050454 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Source and taxonomy' 4 2 'Structure model' 'Version format compliance' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FDI _pdbx_database_status.recvd_initial_deposition_date 2008-11-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC21034 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nocek, B.' 1 'Keigher, L.' 2 'Jedrzejczak, R.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nocek, B.' 1 ? primary 'Keigher, L.' 2 ? primary 'Jedrzejczak, R.' 3 ? primary 'Joachimiak, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'uncharacterized protein' 23476.615 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 water nat water 18.015 63 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)KQIIIAIGREFGSGGHLVAKKLAEHYNIPLYSKELLDEVAKDGRYSKEVLERFDEKP(MSE)NFAFIPVPAG GTTISLEQDIAIRQFNFIRKKANEEKESFVIVGRCAEEILSDNPN(MSE)ISAFILGDKDTKTKRV(MSE)EREGVDEKT ALN(MSE)(MSE)KK(MSE)DK(MSE)RKVYHNFYCESKWGDSRTYDICIKIGKVDVDTATD(MSE)IIKYIDSRDN ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMKQIIIAIGREFGSGGHLVAKKLAEHYNIPLYSKELLDEVAKDGRYSKEVLERFDEKPMNFAFIPVPAGGTTISLEQ DIAIRQFNFIRKKANEEKESFVIVGRCAEEILSDNPNMISAFILGDKDTKTKRVMEREGVDEKTALNMMKKMDKMRKVYH NFYCESKWGDSRTYDICIKIGKVDVDTATDMIIKYIDSRDN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC21034 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'CHLORIDE ION' CL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 LYS n 1 6 GLN n 1 7 ILE n 1 8 ILE n 1 9 ILE n 1 10 ALA n 1 11 ILE n 1 12 GLY n 1 13 ARG n 1 14 GLU n 1 15 PHE n 1 16 GLY n 1 17 SER n 1 18 GLY n 1 19 GLY n 1 20 HIS n 1 21 LEU n 1 22 VAL n 1 23 ALA n 1 24 LYS n 1 25 LYS n 1 26 LEU n 1 27 ALA n 1 28 GLU n 1 29 HIS n 1 30 TYR n 1 31 ASN n 1 32 ILE n 1 33 PRO n 1 34 LEU n 1 35 TYR n 1 36 SER n 1 37 LYS n 1 38 GLU n 1 39 LEU n 1 40 LEU n 1 41 ASP n 1 42 GLU n 1 43 VAL n 1 44 ALA n 1 45 LYS n 1 46 ASP n 1 47 GLY n 1 48 ARG n 1 49 TYR n 1 50 SER n 1 51 LYS n 1 52 GLU n 1 53 VAL n 1 54 LEU n 1 55 GLU n 1 56 ARG n 1 57 PHE n 1 58 ASP n 1 59 GLU n 1 60 LYS n 1 61 PRO n 1 62 MSE n 1 63 ASN n 1 64 PHE n 1 65 ALA n 1 66 PHE n 1 67 ILE n 1 68 PRO n 1 69 VAL n 1 70 PRO n 1 71 ALA n 1 72 GLY n 1 73 GLY n 1 74 THR n 1 75 THR n 1 76 ILE n 1 77 SER n 1 78 LEU n 1 79 GLU n 1 80 GLN n 1 81 ASP n 1 82 ILE n 1 83 ALA n 1 84 ILE n 1 85 ARG n 1 86 GLN n 1 87 PHE n 1 88 ASN n 1 89 PHE n 1 90 ILE n 1 91 ARG n 1 92 LYS n 1 93 LYS n 1 94 ALA n 1 95 ASN n 1 96 GLU n 1 97 GLU n 1 98 LYS n 1 99 GLU n 1 100 SER n 1 101 PHE n 1 102 VAL n 1 103 ILE n 1 104 VAL n 1 105 GLY n 1 106 ARG n 1 107 CYS n 1 108 ALA n 1 109 GLU n 1 110 GLU n 1 111 ILE n 1 112 LEU n 1 113 SER n 1 114 ASP n 1 115 ASN n 1 116 PRO n 1 117 ASN n 1 118 MSE n 1 119 ILE n 1 120 SER n 1 121 ALA n 1 122 PHE n 1 123 ILE n 1 124 LEU n 1 125 GLY n 1 126 ASP n 1 127 LYS n 1 128 ASP n 1 129 THR n 1 130 LYS n 1 131 THR n 1 132 LYS n 1 133 ARG n 1 134 VAL n 1 135 MSE n 1 136 GLU n 1 137 ARG n 1 138 GLU n 1 139 GLY n 1 140 VAL n 1 141 ASP n 1 142 GLU n 1 143 LYS n 1 144 THR n 1 145 ALA n 1 146 LEU n 1 147 ASN n 1 148 MSE n 1 149 MSE n 1 150 LYS n 1 151 LYS n 1 152 MSE n 1 153 ASP n 1 154 LYS n 1 155 MSE n 1 156 ARG n 1 157 LYS n 1 158 VAL n 1 159 TYR n 1 160 HIS n 1 161 ASN n 1 162 PHE n 1 163 TYR n 1 164 CYS n 1 165 GLU n 1 166 SER n 1 167 LYS n 1 168 TRP n 1 169 GLY n 1 170 ASP n 1 171 SER n 1 172 ARG n 1 173 THR n 1 174 TYR n 1 175 ASP n 1 176 ILE n 1 177 CYS n 1 178 ILE n 1 179 LYS n 1 180 ILE n 1 181 GLY n 1 182 LYS n 1 183 VAL n 1 184 ASP n 1 185 VAL n 1 186 ASP n 1 187 THR n 1 188 ALA n 1 189 THR n 1 190 ASP n 1 191 MSE n 1 192 ILE n 1 193 ILE n 1 194 LYS n 1 195 TYR n 1 196 ILE n 1 197 ASP n 1 198 SER n 1 199 ARG n 1 200 ASP n 1 201 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EUBVEN_02315 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 27560' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Eubacterium ventriosum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 411463 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21DE(3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG9 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 ? ? ? A . n A 1 5 LYS 5 2 ? ? ? A . n A 1 6 GLN 6 3 3 GLN GLN A . n A 1 7 ILE 7 4 4 ILE ILE A . n A 1 8 ILE 8 5 5 ILE ILE A . n A 1 9 ILE 9 6 6 ILE ILE A . n A 1 10 ALA 10 7 7 ALA ALA A . n A 1 11 ILE 11 8 8 ILE ILE A . n A 1 12 GLY 12 9 9 GLY GLY A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 GLU 14 11 11 GLU GLU A . n A 1 15 PHE 15 12 12 PHE PHE A . n A 1 16 GLY 16 13 13 GLY GLY A . n A 1 17 SER 17 14 14 SER SER A . n A 1 18 GLY 18 15 15 GLY GLY A . n A 1 19 GLY 19 16 16 GLY GLY A . n A 1 20 HIS 20 17 17 HIS HIS A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 LYS 24 21 21 LYS LYS A . n A 1 25 LYS 25 22 22 LYS LYS A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 HIS 29 26 26 HIS HIS A . n A 1 30 TYR 30 27 27 TYR TYR A . n A 1 31 ASN 31 28 28 ASN ASN A . n A 1 32 ILE 32 29 29 ILE ILE A . n A 1 33 PRO 33 30 30 PRO PRO A . n A 1 34 LEU 34 31 31 LEU LEU A . n A 1 35 TYR 35 32 32 TYR TYR A . n A 1 36 SER 36 33 33 SER SER A . n A 1 37 LYS 37 34 34 LYS LYS A . n A 1 38 GLU 38 35 35 GLU GLU A . n A 1 39 LEU 39 36 36 LEU LEU A . n A 1 40 LEU 40 37 37 LEU LEU A . n A 1 41 ASP 41 38 38 ASP ASP A . n A 1 42 GLU 42 39 39 GLU GLU A . n A 1 43 VAL 43 40 40 VAL VAL A . n A 1 44 ALA 44 41 41 ALA ALA A . n A 1 45 LYS 45 42 42 LYS LYS A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 GLY 47 44 ? ? ? A . n A 1 48 ARG 48 45 ? ? ? A . n A 1 49 TYR 49 46 ? ? ? A . n A 1 50 SER 50 47 ? ? ? A . n A 1 51 LYS 51 48 ? ? ? A . n A 1 52 GLU 52 49 ? ? ? A . n A 1 53 VAL 53 50 ? ? ? A . n A 1 54 LEU 54 51 ? ? ? A . n A 1 55 GLU 55 52 ? ? ? A . n A 1 56 ARG 56 53 ? ? ? A . n A 1 57 PHE 57 54 ? ? ? A . n A 1 58 ASP 58 55 ? ? ? A . n A 1 59 GLU 59 56 ? ? ? A . n A 1 60 LYS 60 57 ? ? ? A . n A 1 61 PRO 61 58 ? ? ? A . n A 1 62 MSE 62 59 ? ? ? A . n A 1 63 ASN 63 60 ? ? ? A . n A 1 64 PHE 64 61 ? ? ? A . n A 1 65 ALA 65 62 ? ? ? A . n A 1 66 PHE 66 63 ? ? ? A . n A 1 67 ILE 67 64 ? ? ? A . n A 1 68 PRO 68 65 ? ? ? A . n A 1 69 VAL 69 66 ? ? ? A . n A 1 70 PRO 70 67 ? ? ? A . n A 1 71 ALA 71 68 ? ? ? A . n A 1 72 GLY 72 69 ? ? ? A . n A 1 73 GLY 73 70 ? ? ? A . n A 1 74 THR 74 71 ? ? ? A . n A 1 75 THR 75 72 ? ? ? A . n A 1 76 ILE 76 73 ? ? ? A . n A 1 77 SER 77 74 ? ? ? A . n A 1 78 LEU 78 75 ? ? ? A . n A 1 79 GLU 79 76 ? ? ? A . n A 1 80 GLN 80 77 77 GLN GLN A . n A 1 81 ASP 81 78 78 ASP ASP A . n A 1 82 ILE 82 79 79 ILE ILE A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 ILE 84 81 81 ILE ILE A . n A 1 85 ARG 85 82 82 ARG ARG A . n A 1 86 GLN 86 83 83 GLN GLN A . n A 1 87 PHE 87 84 84 PHE PHE A . n A 1 88 ASN 88 85 85 ASN ASN A . n A 1 89 PHE 89 86 86 PHE PHE A . n A 1 90 ILE 90 87 87 ILE ILE A . n A 1 91 ARG 91 88 88 ARG ARG A . n A 1 92 LYS 92 89 89 LYS LYS A . n A 1 93 LYS 93 90 90 LYS LYS A . n A 1 94 ALA 94 91 91 ALA ALA A . n A 1 95 ASN 95 92 92 ASN ASN A . n A 1 96 GLU 96 93 93 GLU GLU A . n A 1 97 GLU 97 94 94 GLU GLU A . n A 1 98 LYS 98 95 95 LYS LYS A . n A 1 99 GLU 99 96 96 GLU GLU A . n A 1 100 SER 100 97 97 SER SER A . n A 1 101 PHE 101 98 98 PHE PHE A . n A 1 102 VAL 102 99 99 VAL VAL A . n A 1 103 ILE 103 100 100 ILE ILE A . n A 1 104 VAL 104 101 101 VAL VAL A . n A 1 105 GLY 105 102 102 GLY GLY A . n A 1 106 ARG 106 103 103 ARG ARG A . n A 1 107 CYS 107 104 104 CYS CYS A . n A 1 108 ALA 108 105 105 ALA ALA A . n A 1 109 GLU 109 106 106 GLU GLU A . n A 1 110 GLU 110 107 107 GLU GLU A . n A 1 111 ILE 111 108 108 ILE ILE A . n A 1 112 LEU 112 109 109 LEU LEU A . n A 1 113 SER 113 110 110 SER SER A . n A 1 114 ASP 114 111 111 ASP ASP A . n A 1 115 ASN 115 112 112 ASN ASN A . n A 1 116 PRO 116 113 113 PRO PRO A . n A 1 117 ASN 117 114 114 ASN ASN A . n A 1 118 MSE 118 115 115 MSE MSE A . n A 1 119 ILE 119 116 116 ILE ILE A . n A 1 120 SER 120 117 117 SER SER A . n A 1 121 ALA 121 118 118 ALA ALA A . n A 1 122 PHE 122 119 119 PHE PHE A . n A 1 123 ILE 123 120 120 ILE ILE A . n A 1 124 LEU 124 121 121 LEU LEU A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 ASP 126 123 123 ASP ASP A . n A 1 127 LYS 127 124 124 LYS LYS A . n A 1 128 ASP 128 125 125 ASP ASP A . n A 1 129 THR 129 126 126 THR THR A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 THR 131 128 128 THR THR A . n A 1 132 LYS 132 129 129 LYS LYS A . n A 1 133 ARG 133 130 130 ARG ARG A . n A 1 134 VAL 134 131 131 VAL VAL A . n A 1 135 MSE 135 132 132 MSE MSE A . n A 1 136 GLU 136 133 133 GLU GLU A . n A 1 137 ARG 137 134 134 ARG ARG A . n A 1 138 GLU 138 135 135 GLU GLU A . n A 1 139 GLY 139 136 136 GLY GLY A . n A 1 140 VAL 140 137 137 VAL VAL A . n A 1 141 ASP 141 138 138 ASP ASP A . n A 1 142 GLU 142 139 139 GLU GLU A . n A 1 143 LYS 143 140 140 LYS LYS A . n A 1 144 THR 144 141 141 THR THR A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 LEU 146 143 143 LEU LEU A . n A 1 147 ASN 147 144 144 ASN ASN A . n A 1 148 MSE 148 145 145 MSE MSE A . n A 1 149 MSE 149 146 146 MSE MSE A . n A 1 150 LYS 150 147 147 LYS LYS A . n A 1 151 LYS 151 148 148 LYS LYS A . n A 1 152 MSE 152 149 149 MSE MSE A . n A 1 153 ASP 153 150 150 ASP ASP A . n A 1 154 LYS 154 151 151 LYS LYS A . n A 1 155 MSE 155 152 152 MSE MSE A . n A 1 156 ARG 156 153 153 ARG ARG A . n A 1 157 LYS 157 154 154 LYS LYS A . n A 1 158 VAL 158 155 155 VAL VAL A . n A 1 159 TYR 159 156 156 TYR TYR A . n A 1 160 HIS 160 157 157 HIS HIS A . n A 1 161 ASN 161 158 158 ASN ASN A . n A 1 162 PHE 162 159 159 PHE PHE A . n A 1 163 TYR 163 160 160 TYR TYR A . n A 1 164 CYS 164 161 161 CYS CYS A . n A 1 165 GLU 165 162 162 GLU GLU A . n A 1 166 SER 166 163 163 SER SER A . n A 1 167 LYS 167 164 164 LYS LYS A . n A 1 168 TRP 168 165 165 TRP TRP A . n A 1 169 GLY 169 166 166 GLY GLY A . n A 1 170 ASP 170 167 167 ASP ASP A . n A 1 171 SER 171 168 168 SER SER A . n A 1 172 ARG 172 169 169 ARG ARG A . n A 1 173 THR 173 170 170 THR THR A . n A 1 174 TYR 174 171 171 TYR TYR A . n A 1 175 ASP 175 172 172 ASP ASP A . n A 1 176 ILE 176 173 173 ILE ILE A . n A 1 177 CYS 177 174 174 CYS CYS A . n A 1 178 ILE 178 175 175 ILE ILE A . n A 1 179 LYS 179 176 176 LYS LYS A . n A 1 180 ILE 180 177 177 ILE ILE A . n A 1 181 GLY 181 178 178 GLY GLY A . n A 1 182 LYS 182 179 179 LYS LYS A . n A 1 183 VAL 183 180 180 VAL VAL A . n A 1 184 ASP 184 181 181 ASP ASP A . n A 1 185 VAL 185 182 182 VAL VAL A . n A 1 186 ASP 186 183 183 ASP ASP A . n A 1 187 THR 187 184 184 THR THR A . n A 1 188 ALA 188 185 185 ALA ALA A . n A 1 189 THR 189 186 186 THR THR A . n A 1 190 ASP 190 187 187 ASP ASP A . n A 1 191 MSE 191 188 188 MSE MSE A . n A 1 192 ILE 192 189 189 ILE ILE A . n A 1 193 ILE 193 190 190 ILE ILE A . n A 1 194 LYS 194 191 191 LYS LYS A . n A 1 195 TYR 195 192 192 TYR TYR A . n A 1 196 ILE 196 193 193 ILE ILE A . n A 1 197 ASP 197 194 194 ASP ASP A . n A 1 198 SER 198 195 195 SER SER A . n A 1 199 ARG 199 196 196 ARG ARG A . n A 1 200 ASP 200 197 ? ? ? A . n A 1 201 ASN 201 198 ? ? ? A . n B 1 1 SER 1 -2 ? ? ? B . n B 1 2 ASN 2 -1 ? ? ? B . n B 1 3 ALA 3 0 ? ? ? B . n B 1 4 MSE 4 1 ? ? ? B . n B 1 5 LYS 5 2 2 LYS ALA B . n B 1 6 GLN 6 3 3 GLN GLN B . n B 1 7 ILE 7 4 4 ILE ILE B . n B 1 8 ILE 8 5 5 ILE ILE B . n B 1 9 ILE 9 6 6 ILE ILE B . n B 1 10 ALA 10 7 7 ALA ALA B . n B 1 11 ILE 11 8 8 ILE ILE B . n B 1 12 GLY 12 9 9 GLY GLY B . n B 1 13 ARG 13 10 10 ARG ARG B . n B 1 14 GLU 14 11 11 GLU GLU B . n B 1 15 PHE 15 12 12 PHE PHE B . n B 1 16 GLY 16 13 13 GLY GLY B . n B 1 17 SER 17 14 14 SER SER B . n B 1 18 GLY 18 15 15 GLY GLY B . n B 1 19 GLY 19 16 16 GLY GLY B . n B 1 20 HIS 20 17 17 HIS HIS B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 VAL 22 19 19 VAL VAL B . n B 1 23 ALA 23 20 20 ALA ALA B . n B 1 24 LYS 24 21 21 LYS LYS B . n B 1 25 LYS 25 22 22 LYS LYS B . n B 1 26 LEU 26 23 23 LEU LEU B . n B 1 27 ALA 27 24 24 ALA ALA B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 HIS 29 26 26 HIS HIS B . n B 1 30 TYR 30 27 27 TYR TYR B . n B 1 31 ASN 31 28 28 ASN ASN B . n B 1 32 ILE 32 29 29 ILE ILE B . n B 1 33 PRO 33 30 30 PRO PRO B . n B 1 34 LEU 34 31 31 LEU LEU B . n B 1 35 TYR 35 32 32 TYR TYR B . n B 1 36 SER 36 33 33 SER SER B . n B 1 37 LYS 37 34 34 LYS LYS B . n B 1 38 GLU 38 35 35 GLU GLU B . n B 1 39 LEU 39 36 36 LEU LEU B . n B 1 40 LEU 40 37 37 LEU LEU B . n B 1 41 ASP 41 38 38 ASP ASP B . n B 1 42 GLU 42 39 39 GLU GLU B . n B 1 43 VAL 43 40 40 VAL VAL B . n B 1 44 ALA 44 41 41 ALA ALA B . n B 1 45 LYS 45 42 42 LYS LYS B . n B 1 46 ASP 46 43 43 ASP ASP B . n B 1 47 GLY 47 44 ? ? ? B . n B 1 48 ARG 48 45 ? ? ? B . n B 1 49 TYR 49 46 ? ? ? B . n B 1 50 SER 50 47 ? ? ? B . n B 1 51 LYS 51 48 ? ? ? B . n B 1 52 GLU 52 49 ? ? ? B . n B 1 53 VAL 53 50 50 VAL VAL B . n B 1 54 LEU 54 51 51 LEU LEU B . n B 1 55 GLU 55 52 52 GLU GLU B . n B 1 56 ARG 56 53 53 ARG ARG B . n B 1 57 PHE 57 54 54 PHE PHE B . n B 1 58 ASP 58 55 55 ASP ASP B . n B 1 59 GLU 59 56 56 GLU GLU B . n B 1 60 LYS 60 57 57 LYS LYS B . n B 1 61 PRO 61 58 58 PRO PRO B . n B 1 62 MSE 62 59 59 MSE MSE B . n B 1 63 ASN 63 60 60 ASN ASN B . n B 1 64 PHE 64 61 61 PHE PHE B . n B 1 65 ALA 65 62 62 ALA ALA B . n B 1 66 PHE 66 63 63 PHE PHE B . n B 1 67 ILE 67 64 64 ILE ILE B . n B 1 68 PRO 68 65 65 PRO PRO B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PRO 70 67 ? ? ? B . n B 1 71 ALA 71 68 ? ? ? B . n B 1 72 GLY 72 69 ? ? ? B . n B 1 73 GLY 73 70 ? ? ? B . n B 1 74 THR 74 71 ? ? ? B . n B 1 75 THR 75 72 ? ? ? B . n B 1 76 ILE 76 73 ? ? ? B . n B 1 77 SER 77 74 ? ? ? B . n B 1 78 LEU 78 75 ? ? ? B . n B 1 79 GLU 79 76 ? ? ? B . n B 1 80 GLN 80 77 77 GLN GLN B . n B 1 81 ASP 81 78 78 ASP ASP B . n B 1 82 ILE 82 79 79 ILE ILE B . n B 1 83 ALA 83 80 80 ALA ALA B . n B 1 84 ILE 84 81 81 ILE ILE B . n B 1 85 ARG 85 82 82 ARG ARG B . n B 1 86 GLN 86 83 83 GLN GLN B . n B 1 87 PHE 87 84 84 PHE PHE B . n B 1 88 ASN 88 85 85 ASN ASN B . n B 1 89 PHE 89 86 86 PHE PHE B . n B 1 90 ILE 90 87 87 ILE ILE B . n B 1 91 ARG 91 88 88 ARG ARG B . n B 1 92 LYS 92 89 89 LYS LYS B . n B 1 93 LYS 93 90 90 LYS LYS B . n B 1 94 ALA 94 91 91 ALA ALA B . n B 1 95 ASN 95 92 92 ASN ASN B . n B 1 96 GLU 96 93 93 GLU GLU B . n B 1 97 GLU 97 94 94 GLU GLU B . n B 1 98 LYS 98 95 95 LYS LYS B . n B 1 99 GLU 99 96 96 GLU GLU B . n B 1 100 SER 100 97 97 SER SER B . n B 1 101 PHE 101 98 98 PHE PHE B . n B 1 102 VAL 102 99 99 VAL VAL B . n B 1 103 ILE 103 100 100 ILE ILE B . n B 1 104 VAL 104 101 101 VAL VAL B . n B 1 105 GLY 105 102 102 GLY GLY B . n B 1 106 ARG 106 103 103 ARG ARG B . n B 1 107 CYS 107 104 104 CYS CYS B . n B 1 108 ALA 108 105 105 ALA ALA B . n B 1 109 GLU 109 106 106 GLU GLU B . n B 1 110 GLU 110 107 107 GLU GLU B . n B 1 111 ILE 111 108 108 ILE ILE B . n B 1 112 LEU 112 109 109 LEU LEU B . n B 1 113 SER 113 110 110 SER SER B . n B 1 114 ASP 114 111 111 ASP ASP B . n B 1 115 ASN 115 112 112 ASN ASN B . n B 1 116 PRO 116 113 113 PRO PRO B . n B 1 117 ASN 117 114 114 ASN ASN B . n B 1 118 MSE 118 115 115 MSE MSE B . n B 1 119 ILE 119 116 116 ILE ILE B . n B 1 120 SER 120 117 117 SER SER B . n B 1 121 ALA 121 118 118 ALA ALA B . n B 1 122 PHE 122 119 119 PHE PHE B . n B 1 123 ILE 123 120 120 ILE ILE B . n B 1 124 LEU 124 121 121 LEU LEU B . n B 1 125 GLY 125 122 122 GLY GLY B . n B 1 126 ASP 126 123 123 ASP ASP B . n B 1 127 LYS 127 124 124 LYS LYS B . n B 1 128 ASP 128 125 125 ASP ASP B . n B 1 129 THR 129 126 126 THR THR B . n B 1 130 LYS 130 127 127 LYS LYS B . n B 1 131 THR 131 128 128 THR THR B . n B 1 132 LYS 132 129 129 LYS LYS B . n B 1 133 ARG 133 130 130 ARG ARG B . n B 1 134 VAL 134 131 131 VAL VAL B . n B 1 135 MSE 135 132 132 MSE MSE B . n B 1 136 GLU 136 133 133 GLU GLU B . n B 1 137 ARG 137 134 134 ARG ARG B . n B 1 138 GLU 138 135 135 GLU GLU B . n B 1 139 GLY 139 136 136 GLY GLY B . n B 1 140 VAL 140 137 137 VAL VAL B . n B 1 141 ASP 141 138 138 ASP ASP B . n B 1 142 GLU 142 139 139 GLU GLU B . n B 1 143 LYS 143 140 140 LYS LYS B . n B 1 144 THR 144 141 141 THR THR B . n B 1 145 ALA 145 142 142 ALA ALA B . n B 1 146 LEU 146 143 143 LEU LEU B . n B 1 147 ASN 147 144 144 ASN ASN B . n B 1 148 MSE 148 145 145 MSE MSE B . n B 1 149 MSE 149 146 146 MSE MSE B . n B 1 150 LYS 150 147 147 LYS LYS B . n B 1 151 LYS 151 148 148 LYS LYS B . n B 1 152 MSE 152 149 149 MSE MSE B . n B 1 153 ASP 153 150 150 ASP ASP B . n B 1 154 LYS 154 151 151 LYS LYS B . n B 1 155 MSE 155 152 152 MSE MSE B . n B 1 156 ARG 156 153 153 ARG ARG B . n B 1 157 LYS 157 154 154 LYS LYS B . n B 1 158 VAL 158 155 155 VAL VAL B . n B 1 159 TYR 159 156 156 TYR TYR B . n B 1 160 HIS 160 157 157 HIS HIS B . n B 1 161 ASN 161 158 158 ASN ASN B . n B 1 162 PHE 162 159 159 PHE PHE B . n B 1 163 TYR 163 160 160 TYR TYR B . n B 1 164 CYS 164 161 161 CYS CYS B . n B 1 165 GLU 165 162 162 GLU GLU B . n B 1 166 SER 166 163 163 SER SER B . n B 1 167 LYS 167 164 164 LYS LYS B . n B 1 168 TRP 168 165 165 TRP TRP B . n B 1 169 GLY 169 166 166 GLY GLY B . n B 1 170 ASP 170 167 167 ASP ASP B . n B 1 171 SER 171 168 168 SER SER B . n B 1 172 ARG 172 169 169 ARG ARG B . n B 1 173 THR 173 170 170 THR THR B . n B 1 174 TYR 174 171 171 TYR TYR B . n B 1 175 ASP 175 172 172 ASP ASP B . n B 1 176 ILE 176 173 173 ILE ILE B . n B 1 177 CYS 177 174 174 CYS CYS B . n B 1 178 ILE 178 175 175 ILE ILE B . n B 1 179 LYS 179 176 176 LYS LYS B . n B 1 180 ILE 180 177 177 ILE ILE B . n B 1 181 GLY 181 178 178 GLY GLY B . n B 1 182 LYS 182 179 179 LYS LYS B . n B 1 183 VAL 183 180 180 VAL VAL B . n B 1 184 ASP 184 181 181 ASP ASP B . n B 1 185 VAL 185 182 182 VAL VAL B . n B 1 186 ASP 186 183 183 ASP ASP B . n B 1 187 THR 187 184 184 THR THR B . n B 1 188 ALA 188 185 185 ALA ALA B . n B 1 189 THR 189 186 186 THR THR B . n B 1 190 ASP 190 187 187 ASP ASP B . n B 1 191 MSE 191 188 188 MSE MSE B . n B 1 192 ILE 192 189 189 ILE ILE B . n B 1 193 ILE 193 190 190 ILE ILE B . n B 1 194 LYS 194 191 191 LYS LYS B . n B 1 195 TYR 195 192 192 TYR TYR B . n B 1 196 ILE 196 193 193 ILE ILE B . n B 1 197 ASP 197 194 194 ASP ASP B . n B 1 198 SER 198 195 195 SER SER B . n B 1 199 ARG 199 196 196 ARG ARG B . n B 1 200 ASP 200 197 ? ? ? B . n B 1 201 ASN 201 198 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 2002 2002 SO4 SO4 A . D 2 SO4 1 2003 2003 SO4 SO4 A . E 3 CL 1 5001 5001 CL CL A . F 2 SO4 1 2005 2005 SO4 SO4 B . G 2 SO4 1 2006 2006 SO4 SO4 B . H 3 CL 1 5001 5001 CL CL B . I 4 HOH 1 199 6 HOH HOH A . I 4 HOH 2 200 7 HOH HOH A . I 4 HOH 3 201 8 HOH HOH A . I 4 HOH 4 202 10 HOH HOH A . I 4 HOH 5 203 13 HOH HOH A . I 4 HOH 6 204 15 HOH HOH A . I 4 HOH 7 205 18 HOH HOH A . I 4 HOH 8 206 20 HOH HOH A . I 4 HOH 9 207 24 HOH HOH A . I 4 HOH 10 208 25 HOH HOH A . I 4 HOH 11 209 26 HOH HOH A . I 4 HOH 12 210 27 HOH HOH A . I 4 HOH 13 211 31 HOH HOH A . I 4 HOH 14 212 32 HOH HOH A . I 4 HOH 15 213 35 HOH HOH A . I 4 HOH 16 214 36 HOH HOH A . I 4 HOH 17 215 46 HOH HOH A . I 4 HOH 18 216 48 HOH HOH A . I 4 HOH 19 217 49 HOH HOH A . I 4 HOH 20 218 52 HOH HOH A . I 4 HOH 21 219 57 HOH HOH A . I 4 HOH 22 220 58 HOH HOH A . I 4 HOH 23 221 59 HOH HOH A . I 4 HOH 24 222 60 HOH HOH A . I 4 HOH 25 223 61 HOH HOH A . I 4 HOH 26 224 62 HOH HOH A . I 4 HOH 27 225 63 HOH HOH A . I 4 HOH 28 226 64 HOH HOH A . I 4 HOH 29 227 65 HOH HOH A . I 4 HOH 30 228 66 HOH HOH A . I 4 HOH 31 229 67 HOH HOH A . I 4 HOH 32 230 68 HOH HOH A . J 4 HOH 1 199 3 HOH HOH B . J 4 HOH 2 200 4 HOH HOH B . J 4 HOH 3 201 5 HOH HOH B . J 4 HOH 4 202 9 HOH HOH B . J 4 HOH 5 203 11 HOH HOH B . J 4 HOH 6 204 12 HOH HOH B . J 4 HOH 7 205 17 HOH HOH B . J 4 HOH 8 206 19 HOH HOH B . J 4 HOH 9 207 21 HOH HOH B . J 4 HOH 10 208 22 HOH HOH B . J 4 HOH 11 209 23 HOH HOH B . J 4 HOH 12 210 29 HOH HOH B . J 4 HOH 13 211 30 HOH HOH B . J 4 HOH 14 212 33 HOH HOH B . J 4 HOH 15 213 37 HOH HOH B . J 4 HOH 16 214 38 HOH HOH B . J 4 HOH 17 215 39 HOH HOH B . J 4 HOH 18 216 40 HOH HOH B . J 4 HOH 19 217 41 HOH HOH B . J 4 HOH 20 218 42 HOH HOH B . J 4 HOH 21 219 43 HOH HOH B . J 4 HOH 22 220 44 HOH HOH B . J 4 HOH 23 221 45 HOH HOH B . J 4 HOH 24 222 47 HOH HOH B . J 4 HOH 25 223 50 HOH HOH B . J 4 HOH 26 224 51 HOH HOH B . J 4 HOH 27 225 53 HOH HOH B . J 4 HOH 28 226 54 HOH HOH B . J 4 HOH 29 227 55 HOH HOH B . J 4 HOH 30 228 56 HOH HOH B . J 4 HOH 31 229 70 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 2 ? CG ? B LYS 5 CG 2 1 Y 1 B LYS 2 ? CD ? B LYS 5 CD 3 1 Y 1 B LYS 2 ? CE ? B LYS 5 CE 4 1 Y 1 B LYS 2 ? NZ ? B LYS 5 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 phasing . ? 2 SHELX 'model building' . ? 3 Coot 'model building' . ? 4 MLPHARE phasing . ? 5 CCP4 'model building' . ? 6 PHENIX 'model building' . ? 7 REFMAC refinement 5.5.0054 ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 SHELX phasing . ? 11 CCP4 phasing . ? 12 PHENIX phasing . ? 13 # _cell.entry_id 3FDI _cell.length_a 84.613 _cell.length_b 114.932 _cell.length_c 59.530 _cell.angle_alpha 90.00 _cell.angle_beta 128.06 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FDI _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3FDI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '0.2 M (NH4)2SO4, Bis-Tris pH5.5, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-09-21 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 3FDI _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 35 _reflns.d_resolution_high 2.20 _reflns.number_obs 22354 _reflns.number_all 22602 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.73 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.24 _reflns_shell.percent_possible_all 89.6 _reflns_shell.Rmerge_I_obs 0.57 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1030 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3FDI _refine.ls_number_reflns_obs 21205 _refine.ls_number_reflns_all 22352 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 98.66 _refine.ls_R_factor_obs 0.19969 _refine.ls_R_factor_all 0.2020 _refine.ls_R_factor_R_work 0.19751 _refine.ls_R_factor_R_free 0.24384 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1147 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 36.680 _refine.aniso_B[1][1] 3.82 _refine.aniso_B[2][2] -2.90 _refine.aniso_B[3][3] 2.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 2.40 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.238 _refine.pdbx_overall_ESU_R_Free 0.201 _refine.overall_SU_ML 0.149 _refine.overall_SU_B 13.205 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2747 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 63 _refine_hist.number_atoms_total 2832 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.022 ? 2802 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1991 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.770 1.971 ? 3744 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.931 3.000 ? 4853 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.628 5.000 ? 335 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 27.740 24.470 ? 132 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.370 15.000 ? 569 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.144 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.095 0.200 ? 407 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 3015 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 550 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.877 1.500 ? 1683 'X-RAY DIFFRACTION' ? r_mcbond_other 0.208 1.500 ? 690 'X-RAY DIFFRACTION' ? r_mcangle_it 1.637 2.000 ? 2716 'X-RAY DIFFRACTION' ? r_scbond_it 2.757 3.000 ? 1119 'X-RAY DIFFRACTION' ? r_scangle_it 4.314 4.500 ? 1028 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.203 _refine_ls_shell.d_res_low 2.260 _refine_ls_shell.number_reflns_R_work 1386 _refine_ls_shell.R_factor_R_work 0.287 _refine_ls_shell.percent_reflns_obs 88.71 _refine_ls_shell.R_factor_R_free 0.337 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3FDI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3FDI _struct.title 'Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FDI _struct_keywords.pdbx_keywords 'structural genomics, unknown function' _struct_keywords.text ;Cytidylate kinase like protein, PSI, MCSG, PRK04182 class member, Structural Genomics, Protein Structure Initiative, Midwest Center for Structural Genomics, unknown function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A5Z9C0_9FIRM _struct_ref.pdbx_db_accession A5Z9C0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKQIIIAIGREFGSGGHLVAKKLAEHYNIPLYSKELLDEVAKDGRYSKEVLERFDEKPMNFAFIPVPAGGTTISLEQDIA IRQFNFIRKKANEEKESFVIVGRCAEEILSDNPNMISAFILGDKDTKTKRVMEREGVDEKTALNMMKKMDKMRKVYHNFY CESKWGDSRTYDICIKIGKVDVDTATDMIIKYIDSRDN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FDI A 4 ? 201 ? A5Z9C0 1 ? 198 ? 1 198 2 1 3FDI B 4 ? 201 ? A5Z9C0 1 ? 198 ? 1 198 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FDI SER A 1 ? UNP A5Z9C0 ? ? 'expression tag' -2 1 1 3FDI ASN A 2 ? UNP A5Z9C0 ? ? 'expression tag' -1 2 1 3FDI ALA A 3 ? UNP A5Z9C0 ? ? 'expression tag' 0 3 2 3FDI SER B 1 ? UNP A5Z9C0 ? ? 'expression tag' -2 4 2 3FDI ASN B 2 ? UNP A5Z9C0 ? ? 'expression tag' -1 5 2 3FDI ALA B 3 ? UNP A5Z9C0 ? ? 'expression tag' 0 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9850 ? 1 MORE -239 ? 1 'SSA (A^2)' 31350 ? 2 'ABSA (A^2)' 3620 ? 2 MORE -112 ? 2 'SSA (A^2)' 16980 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E,F,G,H,I,J 2 1 A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 -36.6994318519 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 46.8718743144 # _struct_biol.id 1 _struct_biol.details 'authors state that the biological assembly is highly likely dimer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 18 ? TYR A 30 ? GLY A 15 TYR A 27 1 ? 13 HELX_P HELX_P2 2 SER A 36 ? VAL A 43 ? SER A 33 VAL A 40 1 ? 8 HELX_P HELX_P3 3 GLN A 80 ? GLU A 96 ? GLN A 77 GLU A 93 1 ? 17 HELX_P HELX_P4 4 CYS A 107 ? LEU A 112 ? CYS A 104 LEU A 109 1 ? 6 HELX_P HELX_P5 5 ASP A 126 ? GLY A 139 ? ASP A 123 GLY A 136 1 ? 14 HELX_P HELX_P6 6 ASP A 141 ? CYS A 164 ? ASP A 138 CYS A 161 1 ? 24 HELX_P HELX_P7 7 ASP A 170 ? TYR A 174 ? ASP A 167 TYR A 171 5 ? 5 HELX_P HELX_P8 8 ASP A 184 ? SER A 198 ? ASP A 181 SER A 195 1 ? 15 HELX_P HELX_P9 9 GLY B 18 ? ASN B 31 ? GLY B 15 ASN B 28 1 ? 14 HELX_P HELX_P10 10 SER B 36 ? ALA B 44 ? SER B 33 ALA B 41 1 ? 9 HELX_P HELX_P11 11 GLU B 59 ? ILE B 67 ? GLU B 56 ILE B 64 1 ? 9 HELX_P HELX_P12 12 GLN B 80 ? GLU B 96 ? GLN B 77 GLU B 93 1 ? 17 HELX_P HELX_P13 13 CYS B 107 ? LEU B 112 ? CYS B 104 LEU B 109 1 ? 6 HELX_P HELX_P14 14 ASP B 126 ? GLY B 139 ? ASP B 123 GLY B 136 1 ? 14 HELX_P HELX_P15 15 ASP B 141 ? CYS B 164 ? ASP B 138 CYS B 161 1 ? 24 HELX_P HELX_P16 16 ASP B 170 ? TYR B 174 ? ASP B 167 TYR B 171 5 ? 5 HELX_P HELX_P17 17 ASP B 184 ? SER B 198 ? ASP B 181 SER B 195 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 117 C ? ? ? 1_555 A MSE 118 N ? ? A ASN 114 A MSE 115 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale2 covale both ? A MSE 118 C ? ? ? 1_555 A ILE 119 N ? ? A MSE 115 A ILE 116 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale3 covale both ? A VAL 134 C ? ? ? 1_555 A MSE 135 N ? ? A VAL 131 A MSE 132 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale4 covale both ? A MSE 135 C ? ? ? 1_555 A GLU 136 N ? ? A MSE 132 A GLU 133 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A ASN 147 C ? ? ? 1_555 A MSE 148 N ? ? A ASN 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? A MSE 148 C ? ? ? 1_555 A MSE 149 N ? ? A MSE 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale7 covale both ? A MSE 149 C ? ? ? 1_555 A LYS 150 N ? ? A MSE 146 A LYS 147 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A LYS 151 C ? ? ? 1_555 A MSE 152 N ? ? A LYS 148 A MSE 149 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale9 covale both ? A MSE 152 C ? ? ? 1_555 A ASP 153 N ? ? A MSE 149 A ASP 150 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale10 covale both ? A LYS 154 C ? ? ? 1_555 A MSE 155 N ? ? A LYS 151 A MSE 152 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale11 covale both ? A MSE 155 C ? ? ? 1_555 A ARG 156 N ? ? A MSE 152 A ARG 153 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale12 covale both ? A ASP 190 C ? ? ? 1_555 A MSE 191 N ? ? A ASP 187 A MSE 188 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale13 covale both ? A MSE 191 C ? ? ? 1_555 A ILE 192 N ? ? A MSE 188 A ILE 189 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale14 covale both ? B PRO 61 C ? ? ? 1_555 B MSE 62 N ? ? B PRO 58 B MSE 59 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale15 covale both ? B MSE 62 C ? ? ? 1_555 B ASN 63 N ? ? B MSE 59 B ASN 60 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale16 covale both ? B ASN 117 C ? ? ? 1_555 B MSE 118 N ? ? B ASN 114 B MSE 115 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale17 covale both ? B MSE 118 C ? ? ? 1_555 B ILE 119 N ? ? B MSE 115 B ILE 116 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale18 covale both ? B VAL 134 C ? ? ? 1_555 B MSE 135 N ? ? B VAL 131 B MSE 132 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale19 covale both ? B MSE 135 C ? ? ? 1_555 B GLU 136 N ? ? B MSE 132 B GLU 133 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale20 covale both ? B ASN 147 C ? ? ? 1_555 B MSE 148 N ? ? B ASN 144 B MSE 145 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale21 covale both ? B MSE 148 C ? ? ? 1_555 B MSE 149 N ? ? B MSE 145 B MSE 146 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale22 covale both ? B MSE 149 C ? ? ? 1_555 B LYS 150 N ? ? B MSE 146 B LYS 147 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale23 covale both ? B LYS 151 C ? ? ? 1_555 B MSE 152 N ? ? B LYS 148 B MSE 149 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale24 covale both ? B MSE 152 C ? ? ? 1_555 B ASP 153 N ? ? B MSE 149 B ASP 150 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale25 covale both ? B LYS 154 C ? ? ? 1_555 B MSE 155 N ? ? B LYS 151 B MSE 152 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale26 covale both ? B MSE 155 C ? ? ? 1_555 B ARG 156 N ? ? B MSE 152 B ARG 153 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale27 covale both ? B ASP 190 C ? ? ? 1_555 B MSE 191 N ? ? B ASP 187 B MSE 188 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale28 covale both ? B MSE 191 C ? ? ? 1_555 B ILE 192 N ? ? B MSE 188 B ILE 189 1_555 ? ? ? ? ? ? ? 1.347 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel A 9 10 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 34 ? TYR A 35 ? LEU A 31 TYR A 32 A 2 PHE A 101 ? VAL A 104 ? PHE A 98 VAL A 101 A 3 ILE A 8 ? ARG A 13 ? ILE A 5 ARG A 10 A 4 MSE A 118 ? GLY A 125 ? MSE A 115 GLY A 122 A 5 ILE A 176 ? ILE A 180 ? ILE A 173 ILE A 177 A 6 ILE B 176 ? ILE B 180 ? ILE B 173 ILE B 177 A 7 MSE B 118 ? GLY B 125 ? MSE B 115 GLY B 122 A 8 ILE B 8 ? ARG B 13 ? ILE B 5 ARG B 10 A 9 PHE B 101 ? VAL B 104 ? PHE B 98 VAL B 101 A 10 LEU B 34 ? TYR B 35 ? LEU B 31 TYR B 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 35 ? N TYR A 32 O VAL A 102 ? O VAL A 99 A 2 3 O ILE A 103 ? O ILE A 100 N ILE A 11 ? N ILE A 8 A 3 4 N GLY A 12 ? N GLY A 9 O ALA A 121 ? O ALA A 118 A 4 5 N LEU A 124 ? N LEU A 121 O ILE A 180 ? O ILE A 177 A 5 6 N CYS A 177 ? N CYS A 174 O CYS B 177 ? O CYS B 174 A 6 7 O ILE B 180 ? O ILE B 177 N LEU B 124 ? N LEU B 121 A 7 8 O ILE B 119 ? O ILE B 116 N ALA B 10 ? N ALA B 7 A 8 9 N ILE B 11 ? N ILE B 8 O ILE B 103 ? O ILE B 100 A 9 10 O VAL B 102 ? O VAL B 99 N TYR B 35 ? N TYR B 32 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A2002' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE SO4 A2003' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A5001' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 B2005' AC5 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 B2006' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL B5001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 13 ? ARG A 10 . ? 1_555 ? 2 AC1 5 LYS A 37 ? LYS A 34 . ? 1_555 ? 3 AC1 5 GLY A 105 ? GLY A 102 . ? 1_555 ? 4 AC1 5 ARG A 106 ? ARG A 103 . ? 1_555 ? 5 AC1 5 HOH I . ? HOH A 221 . ? 1_555 ? 6 AC2 9 ARG A 13 ? ARG A 10 . ? 1_555 ? 7 AC2 9 GLU A 14 ? GLU A 11 . ? 1_555 ? 8 AC2 9 GLY A 16 ? GLY A 13 . ? 1_555 ? 9 AC2 9 SER A 17 ? SER A 14 . ? 1_555 ? 10 AC2 9 GLY A 18 ? GLY A 15 . ? 1_555 ? 11 AC2 9 GLY A 19 ? GLY A 16 . ? 1_555 ? 12 AC2 9 HIS A 20 ? HIS A 17 . ? 1_555 ? 13 AC2 9 ARG A 137 ? ARG A 134 . ? 1_555 ? 14 AC2 9 HOH I . ? HOH A 199 . ? 1_555 ? 15 AC3 3 GLY A 12 ? GLY A 9 . ? 1_555 ? 16 AC3 3 ARG A 13 ? ARG A 10 . ? 1_555 ? 17 AC3 3 TRP A 168 ? TRP A 165 . ? 1_555 ? 18 AC4 6 ARG B 13 ? ARG B 10 . ? 1_555 ? 19 AC4 6 LYS B 37 ? LYS B 34 . ? 1_555 ? 20 AC4 6 ARG B 106 ? ARG B 103 . ? 1_555 ? 21 AC4 6 HOH J . ? HOH B 207 . ? 1_555 ? 22 AC4 6 HOH J . ? HOH B 225 . ? 1_555 ? 23 AC4 6 HOH J . ? HOH B 226 . ? 1_555 ? 24 AC5 8 ARG B 13 ? ARG B 10 . ? 1_555 ? 25 AC5 8 GLU B 14 ? GLU B 11 . ? 1_555 ? 26 AC5 8 GLY B 16 ? GLY B 13 . ? 1_555 ? 27 AC5 8 SER B 17 ? SER B 14 . ? 1_555 ? 28 AC5 8 GLY B 18 ? GLY B 15 . ? 1_555 ? 29 AC5 8 GLY B 19 ? GLY B 16 . ? 1_555 ? 30 AC5 8 HIS B 20 ? HIS B 17 . ? 1_555 ? 31 AC5 8 ARG B 137 ? ARG B 134 . ? 1_555 ? 32 AC6 4 GLY B 12 ? GLY B 9 . ? 1_555 ? 33 AC6 4 ARG B 13 ? ARG B 10 . ? 1_555 ? 34 AC6 4 TRP B 168 ? TRP B 165 . ? 1_555 ? 35 AC6 4 HOH J . ? HOH B 207 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 121 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 121 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 121 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 132.23 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 16.93 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 10 ? ? -172.08 148.76 2 1 CYS A 104 ? ? 48.08 26.60 3 1 ARG B 10 ? ? -174.46 149.16 4 1 LYS B 42 ? ? -91.06 31.30 5 1 ARG B 53 ? ? -156.83 74.06 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 118 A MSE 115 ? MET SELENOMETHIONINE 2 A MSE 135 A MSE 132 ? MET SELENOMETHIONINE 3 A MSE 148 A MSE 145 ? MET SELENOMETHIONINE 4 A MSE 149 A MSE 146 ? MET SELENOMETHIONINE 5 A MSE 152 A MSE 149 ? MET SELENOMETHIONINE 6 A MSE 155 A MSE 152 ? MET SELENOMETHIONINE 7 A MSE 191 A MSE 188 ? MET SELENOMETHIONINE 8 B MSE 62 B MSE 59 ? MET SELENOMETHIONINE 9 B MSE 118 B MSE 115 ? MET SELENOMETHIONINE 10 B MSE 135 B MSE 132 ? MET SELENOMETHIONINE 11 B MSE 148 B MSE 145 ? MET SELENOMETHIONINE 12 B MSE 149 B MSE 146 ? MET SELENOMETHIONINE 13 B MSE 152 B MSE 149 ? MET SELENOMETHIONINE 14 B MSE 155 B MSE 152 ? MET SELENOMETHIONINE 15 B MSE 191 B MSE 188 ? MET SELENOMETHIONINE # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -1.5921 _pdbx_refine_tls.origin_y 99.4929 _pdbx_refine_tls.origin_z 22.3001 _pdbx_refine_tls.T[1][1] 0.0660 _pdbx_refine_tls.T[2][2] 0.0756 _pdbx_refine_tls.T[3][3] 0.0474 _pdbx_refine_tls.T[1][2] 0.0095 _pdbx_refine_tls.T[1][3] -0.0017 _pdbx_refine_tls.T[2][3] -0.0180 _pdbx_refine_tls.L[1][1] 1.5845 _pdbx_refine_tls.L[2][2] 3.2462 _pdbx_refine_tls.L[3][3] 0.7650 _pdbx_refine_tls.L[1][2] -0.0195 _pdbx_refine_tls.L[1][3] -0.2556 _pdbx_refine_tls.L[2][3] 0.1231 _pdbx_refine_tls.S[1][1] -0.0539 _pdbx_refine_tls.S[2][2] 0.1212 _pdbx_refine_tls.S[3][3] -0.0673 _pdbx_refine_tls.S[1][2] -0.1210 _pdbx_refine_tls.S[1][3] 0.1169 _pdbx_refine_tls.S[2][3] -0.3255 _pdbx_refine_tls.S[2][1] 0.1569 _pdbx_refine_tls.S[3][1] -0.0278 _pdbx_refine_tls.S[3][2] -0.0410 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 B 199 B 229 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 199 A 230 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 B 2005 B 5001 ? . . . . ? 'X-RAY DIFFRACTION' 4 1 A 2002 A 5001 ? . . . . ? 'X-RAY DIFFRACTION' 5 1 B 2 B 196 ? . . . . ? 'X-RAY DIFFRACTION' 6 1 A 3 A 196 ? . . . . ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MSE 1 ? A MSE 4 5 1 Y 1 A LYS 2 ? A LYS 5 6 1 Y 1 A GLY 44 ? A GLY 47 7 1 Y 1 A ARG 45 ? A ARG 48 8 1 Y 1 A TYR 46 ? A TYR 49 9 1 Y 1 A SER 47 ? A SER 50 10 1 Y 1 A LYS 48 ? A LYS 51 11 1 Y 1 A GLU 49 ? A GLU 52 12 1 Y 1 A VAL 50 ? A VAL 53 13 1 Y 1 A LEU 51 ? A LEU 54 14 1 Y 1 A GLU 52 ? A GLU 55 15 1 Y 1 A ARG 53 ? A ARG 56 16 1 Y 1 A PHE 54 ? A PHE 57 17 1 Y 1 A ASP 55 ? A ASP 58 18 1 Y 1 A GLU 56 ? A GLU 59 19 1 Y 1 A LYS 57 ? A LYS 60 20 1 Y 1 A PRO 58 ? A PRO 61 21 1 Y 1 A MSE 59 ? A MSE 62 22 1 Y 1 A ASN 60 ? A ASN 63 23 1 Y 1 A PHE 61 ? A PHE 64 24 1 Y 1 A ALA 62 ? A ALA 65 25 1 Y 1 A PHE 63 ? A PHE 66 26 1 Y 1 A ILE 64 ? A ILE 67 27 1 Y 1 A PRO 65 ? A PRO 68 28 1 Y 1 A VAL 66 ? A VAL 69 29 1 Y 1 A PRO 67 ? A PRO 70 30 1 Y 1 A ALA 68 ? A ALA 71 31 1 Y 1 A GLY 69 ? A GLY 72 32 1 Y 1 A GLY 70 ? A GLY 73 33 1 Y 1 A THR 71 ? A THR 74 34 1 Y 1 A THR 72 ? A THR 75 35 1 Y 1 A ILE 73 ? A ILE 76 36 1 Y 1 A SER 74 ? A SER 77 37 1 Y 1 A LEU 75 ? A LEU 78 38 1 Y 1 A GLU 76 ? A GLU 79 39 1 Y 1 A ASP 197 ? A ASP 200 40 1 Y 1 A ASN 198 ? A ASN 201 41 1 Y 1 B SER -2 ? B SER 1 42 1 Y 1 B ASN -1 ? B ASN 2 43 1 Y 1 B ALA 0 ? B ALA 3 44 1 Y 1 B MSE 1 ? B MSE 4 45 1 Y 1 B GLY 44 ? B GLY 47 46 1 Y 1 B ARG 45 ? B ARG 48 47 1 Y 1 B TYR 46 ? B TYR 49 48 1 Y 1 B SER 47 ? B SER 50 49 1 Y 1 B LYS 48 ? B LYS 51 50 1 Y 1 B GLU 49 ? B GLU 52 51 1 Y 1 B PRO 67 ? B PRO 70 52 1 Y 1 B ALA 68 ? B ALA 71 53 1 Y 1 B GLY 69 ? B GLY 72 54 1 Y 1 B GLY 70 ? B GLY 73 55 1 Y 1 B THR 71 ? B THR 74 56 1 Y 1 B THR 72 ? B THR 75 57 1 Y 1 B ILE 73 ? B ILE 76 58 1 Y 1 B SER 74 ? B SER 77 59 1 Y 1 B LEU 75 ? B LEU 78 60 1 Y 1 B GLU 76 ? B GLU 79 61 1 Y 1 B ASP 197 ? B ASP 200 62 1 Y 1 B ASN 198 ? B ASN 201 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MSE N N N N 231 MSE CA C N S 232 MSE C C N N 233 MSE O O N N 234 MSE OXT O N N 235 MSE CB C N N 236 MSE CG C N N 237 MSE SE SE N N 238 MSE CE C N N 239 MSE H H N N 240 MSE H2 H N N 241 MSE HA H N N 242 MSE HXT H N N 243 MSE HB2 H N N 244 MSE HB3 H N N 245 MSE HG2 H N N 246 MSE HG3 H N N 247 MSE HE1 H N N 248 MSE HE2 H N N 249 MSE HE3 H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 SO4 S S N N 305 SO4 O1 O N N 306 SO4 O2 O N N 307 SO4 O3 O N N 308 SO4 O4 O N N 309 THR N N N N 310 THR CA C N S 311 THR C C N N 312 THR O O N N 313 THR CB C N R 314 THR OG1 O N N 315 THR CG2 C N N 316 THR OXT O N N 317 THR H H N N 318 THR H2 H N N 319 THR HA H N N 320 THR HB H N N 321 THR HG1 H N N 322 THR HG21 H N N 323 THR HG22 H N N 324 THR HG23 H N N 325 THR HXT H N N 326 TRP N N N N 327 TRP CA C N S 328 TRP C C N N 329 TRP O O N N 330 TRP CB C N N 331 TRP CG C Y N 332 TRP CD1 C Y N 333 TRP CD2 C Y N 334 TRP NE1 N Y N 335 TRP CE2 C Y N 336 TRP CE3 C Y N 337 TRP CZ2 C Y N 338 TRP CZ3 C Y N 339 TRP CH2 C Y N 340 TRP OXT O N N 341 TRP H H N N 342 TRP H2 H N N 343 TRP HA H N N 344 TRP HB2 H N N 345 TRP HB3 H N N 346 TRP HD1 H N N 347 TRP HE1 H N N 348 TRP HE3 H N N 349 TRP HZ2 H N N 350 TRP HZ3 H N N 351 TRP HH2 H N N 352 TRP HXT H N N 353 TYR N N N N 354 TYR CA C N S 355 TYR C C N N 356 TYR O O N N 357 TYR CB C N N 358 TYR CG C Y N 359 TYR CD1 C Y N 360 TYR CD2 C Y N 361 TYR CE1 C Y N 362 TYR CE2 C Y N 363 TYR CZ C Y N 364 TYR OH O N N 365 TYR OXT O N N 366 TYR H H N N 367 TYR H2 H N N 368 TYR HA H N N 369 TYR HB2 H N N 370 TYR HB3 H N N 371 TYR HD1 H N N 372 TYR HD2 H N N 373 TYR HE1 H N N 374 TYR HE2 H N N 375 TYR HH H N N 376 TYR HXT H N N 377 VAL N N N N 378 VAL CA C N S 379 VAL C C N N 380 VAL O O N N 381 VAL CB C N N 382 VAL CG1 C N N 383 VAL CG2 C N N 384 VAL OXT O N N 385 VAL H H N N 386 VAL H2 H N N 387 VAL HA H N N 388 VAL HB H N N 389 VAL HG11 H N N 390 VAL HG12 H N N 391 VAL HG13 H N N 392 VAL HG21 H N N 393 VAL HG22 H N N 394 VAL HG23 H N N 395 VAL HXT H N N 396 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MSE N CA sing N N 218 MSE N H sing N N 219 MSE N H2 sing N N 220 MSE CA C sing N N 221 MSE CA CB sing N N 222 MSE CA HA sing N N 223 MSE C O doub N N 224 MSE C OXT sing N N 225 MSE OXT HXT sing N N 226 MSE CB CG sing N N 227 MSE CB HB2 sing N N 228 MSE CB HB3 sing N N 229 MSE CG SE sing N N 230 MSE CG HG2 sing N N 231 MSE CG HG3 sing N N 232 MSE SE CE sing N N 233 MSE CE HE1 sing N N 234 MSE CE HE2 sing N N 235 MSE CE HE3 sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SO4 S O1 doub N N 290 SO4 S O2 doub N N 291 SO4 S O3 sing N N 292 SO4 S O4 sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 VAL N CA sing N N 362 VAL N H sing N N 363 VAL N H2 sing N N 364 VAL CA C sing N N 365 VAL CA CB sing N N 366 VAL CA HA sing N N 367 VAL C O doub N N 368 VAL C OXT sing N N 369 VAL CB CG1 sing N N 370 VAL CB CG2 sing N N 371 VAL CB HB sing N N 372 VAL CG1 HG11 sing N N 373 VAL CG1 HG12 sing N N 374 VAL CG1 HG13 sing N N 375 VAL CG2 HG21 sing N N 376 VAL CG2 HG22 sing N N 377 VAL CG2 HG23 sing N N 378 VAL OXT HXT sing N N 379 # _atom_sites.entry_id 3FDI _atom_sites.fract_transf_matrix[1][1] 0.011819 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009252 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021333 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE # loop_