data_3FEA # _entry.id 3FEA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FEA pdb_00003fea 10.2210/pdb3fea/pdb RCSB RCSB050482 ? ? WWPDB D_1000050482 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FE7 . unspecified PDB 3DAB . unspecified # _pdbx_database_status.entry_id 3FEA _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-11-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Kallen, J.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal Structures of Human MdmX (HdmX) in Complex with p53 Peptide Analogues Reveal Surprising Conformational Changes' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 8812 _citation.page_last 8821 _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19153082 _citation.pdbx_database_id_DOI 10.1074/jbc.M809096200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kallen, J.' 1 ? primary 'Goepfert, A.' 2 ? primary 'Blechschmidt, A.' 3 ? primary 'Izaac, A.' 4 ? primary 'Geiser, M.' 5 ? primary 'Tavares, G.' 6 ? primary 'Ramage, P.' 7 ? primary 'Furet, P.' 8 ? primary 'Masuya, K.' 9 ? primary 'Lisztwan, J.' 10 ? # _cell.length_a 42.249 _cell.length_b 42.249 _cell.length_c 70.449 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3FEA _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 41' _symmetry.entry_id 3FEA _symmetry.Int_Tables_number 76 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mdm4 protein' 11186.985 1 ? C17S 'N-terminal domain, UNP residues 14-111' ? 2 polymer syn 'p53-peptidomimetic Ac-Phe-Met-Aib-Pmp-6-Cl-Trp-Glu-Ac3c-Leu-NH2' 1192.731 2 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 water nat water 18.015 82 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'p53-binding protein Mdm4, Mdm2-like p53-binding protein, Protein Mdmx, Double minute 4 protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPDSASRISPGQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFS VKDPSPLYDMLRKNLVTLAT ; ;GPDSASRISPGQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFS VKDPSPLYDMLRKNLVTLAT ; A ? 2 'polypeptide(L)' no yes '(ACE)FM(AIB)(PM3)(6CW)E(1AC)L(NH2)' XFMAFWEXLX L,M ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ASP n 1 4 SER n 1 5 ALA n 1 6 SER n 1 7 ARG n 1 8 ILE n 1 9 SER n 1 10 PRO n 1 11 GLY n 1 12 GLN n 1 13 ILE n 1 14 ASN n 1 15 GLN n 1 16 VAL n 1 17 ARG n 1 18 PRO n 1 19 LYS n 1 20 LEU n 1 21 PRO n 1 22 LEU n 1 23 LEU n 1 24 LYS n 1 25 ILE n 1 26 LEU n 1 27 HIS n 1 28 ALA n 1 29 ALA n 1 30 GLY n 1 31 ALA n 1 32 GLN n 1 33 GLY n 1 34 GLU n 1 35 MET n 1 36 PHE n 1 37 THR n 1 38 VAL n 1 39 LYS n 1 40 GLU n 1 41 VAL n 1 42 MET n 1 43 HIS n 1 44 TYR n 1 45 LEU n 1 46 GLY n 1 47 GLN n 1 48 TYR n 1 49 ILE n 1 50 MET n 1 51 VAL n 1 52 LYS n 1 53 GLN n 1 54 LEU n 1 55 TYR n 1 56 ASP n 1 57 GLN n 1 58 GLN n 1 59 GLU n 1 60 GLN n 1 61 HIS n 1 62 MET n 1 63 VAL n 1 64 TYR n 1 65 CYS n 1 66 GLY n 1 67 GLY n 1 68 ASP n 1 69 LEU n 1 70 LEU n 1 71 GLY n 1 72 GLU n 1 73 LEU n 1 74 LEU n 1 75 GLY n 1 76 ARG n 1 77 GLN n 1 78 SER n 1 79 PHE n 1 80 SER n 1 81 VAL n 1 82 LYS n 1 83 ASP n 1 84 PRO n 1 85 SER n 1 86 PRO n 1 87 LEU n 1 88 TYR n 1 89 ASP n 1 90 MET n 1 91 LEU n 1 92 ARG n 1 93 LYS n 1 94 ASN n 1 95 LEU n 1 96 VAL n 1 97 THR n 1 98 LEU n 1 99 ALA n 1 100 THR n 2 1 ACE n 2 2 PHE n 2 3 MET n 2 4 AIB n 2 5 PM3 n 2 6 6CW n 2 7 GLU n 2 8 1AC n 2 9 LEU n 2 10 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MDM4, MDMX' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28 derivative pXI607e' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Peptide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MDM4_HUMAN O15151 1 ;DSACRISPGQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVK DPSPLYDMLRKNLVTLAT ; 14 ? 2 PDB 3FEA 3FEA 2 XFMAFWEXLX 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FEA A 3 ? 100 ? O15151 14 ? 111 ? 14 111 2 2 3FEA L 1 ? 10 ? 3FEA 1 ? 10 ? 1 10 3 2 3FEA M 1 ? 10 ? 3FEA 1 ? 10 ? 1 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FEA GLY A 1 ? UNP O15151 ? ? 'expression tag' 12 1 1 3FEA PRO A 2 ? UNP O15151 ? ? 'expression tag' 13 2 1 3FEA SER A 6 ? UNP O15151 CYS 17 'engineered mutation' 17 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1AC 'peptide linking' n '1-AMINOCYCLOPROPANECARBOXYLIC ACID' ? 'C4 H7 N O2' 101.104 6CW 'L-peptide linking' n 6-CHLORO-L-TRYPTOPHAN ? 'C11 H11 Cl N2 O2' 238.670 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PM3 'L-peptide linking' n '2-AMINO-3-(4-PHOSPHONOMETHYL-PHENYL)-PROPIONIC ACID' ? 'C10 H14 N O5 P' 259.196 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3FEA _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.604 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 46.90 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '3.1M AmSo4, 1% MPD, 0.1M MES, pH6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-04-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98371 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_wavelength_list 0.98371 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA # _reflns.entry_id 3FEA _reflns.d_resolution_high 1.330 _reflns.d_resolution_low 20.000 _reflns.number_obs 27490 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_netI_over_sigmaI 39.165 _reflns.pdbx_chi_squared 1.036 _reflns.pdbx_redundancy 8.100 _reflns.percent_possible_obs 97.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.33 _reflns_shell.d_res_low 1.38 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.266 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.118 _reflns_shell.pdbx_redundancy 2.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2078 _reflns_shell.percent_possible_all 74.20 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3FEA _refine.ls_d_res_high 1.330 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 96.800 _refine.ls_number_reflns_obs 27453 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.194 _refine.ls_R_factor_R_work 0.193 _refine.ls_wR_factor_R_work 0.207 _refine.ls_R_factor_R_free 0.206 _refine.ls_wR_factor_R_free 0.214 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1388 _refine.B_iso_mean 21.503 _refine.aniso_B[1][1] 0.000 _refine.aniso_B[2][2] 0.000 _refine.aniso_B[3][3] 0.000 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.954 _refine.overall_SU_R_Cruickshank_DPI 0.054 _refine.overall_SU_R_free 0.053 _refine.pdbx_overall_ESU_R 0.054 _refine.pdbx_overall_ESU_R_Free 0.053 _refine.overall_SU_ML 0.035 _refine.overall_SU_B 0.830 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.872 _refine.B_iso_max 58.73 _refine.B_iso_min 8.79 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 3FE7' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 840 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 930 _refine_hist.d_res_high 1.330 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 868 0.011 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1179 1.584 2.222 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 82 6.453 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30 42.675 24.667 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 130 10.674 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3 21.456 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 119 0.093 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 647 0.008 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 411 1.007 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 660 1.894 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 457 2.644 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 513 4.154 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.330 _refine_ls_shell.d_res_low 1.365 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 65.220 _refine_ls_shell.number_reflns_R_work 1297 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.R_factor_R_free 0.316 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1371 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FEA _struct.title 'Crystal Structure of HdmX bound to the p53-peptidomimetic Ac-Phe-Met-Aib-Pmp-6-Cl-Trp-Glu-Ac3c-Leu-NH2 at 1.33A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FEA _struct_keywords.text ;HdmX, Hdm4, human Mdm4, human MdmX, protein-protein interaction, p53, Metal-binding, Nucleus, Polymorphism, Zinc, Zinc-finger, CELL CYCLE ; _struct_keywords.pdbx_keywords 'CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 19 ? ALA A 29 ? LYS A 30 ALA A 40 1 ? 11 HELX_P HELX_P2 2 THR A 37 ? LYS A 52 ? THR A 48 LYS A 63 1 ? 16 HELX_P HELX_P3 3 ASP A 68 ? GLY A 75 ? ASP A 79 GLY A 86 1 ? 8 HELX_P HELX_P4 4 PRO A 84 ? ASN A 94 ? PRO A 95 ASN A 105 1 ? 11 HELX_P HELX_P5 5 PHE B 2 ? GLU B 7 ? PHE L 2 GLU L 7 1 ? 6 HELX_P HELX_P6 6 MET C 3 ? GLU C 7 ? MET M 3 GLU M 7 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ACE 1 C ? ? ? 1_555 B PHE 2 N ? ? L ACE 1 L PHE 2 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale2 covale both ? B MET 3 C ? ? ? 1_555 B AIB 4 N ? ? L MET 3 L AIB 4 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale3 covale both ? B AIB 4 C ? ? ? 1_555 B PM3 5 N ? ? L AIB 4 L PM3 5 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale4 covale both ? B PM3 5 C ? ? ? 1_555 B 6CW 6 N ? ? L PM3 5 L 6CW 6 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale5 covale both ? B 6CW 6 C ? ? ? 1_555 B GLU 7 N ? ? L 6CW 6 L GLU 7 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? B GLU 7 C ? ? ? 1_555 B 1AC 8 N ? ? L GLU 7 L 1AC 8 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale7 covale both ? B 1AC 8 C ? ? ? 1_555 B LEU 9 N ? ? L 1AC 8 L LEU 9 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale8 covale both ? B LEU 9 C ? ? ? 1_555 B NH2 10 N ? ? L LEU 9 L NH2 10 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale9 covale both ? C ACE 1 C ? ? ? 1_555 C PHE 2 N ? ? M ACE 1 M PHE 2 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale10 covale both ? C MET 3 C ? ? ? 1_555 C AIB 4 N ? ? M MET 3 M AIB 4 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale11 covale both ? C AIB 4 C ? ? ? 1_555 C PM3 5 N ? ? M AIB 4 M PM3 5 1_555 ? ? ? ? ? ? ? 1.359 ? ? covale12 covale both ? C PM3 5 C ? ? ? 1_555 C 6CW 6 N ? ? M PM3 5 M 6CW 6 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale13 covale both ? C 6CW 6 C ? ? ? 1_555 C GLU 7 N ? ? M 6CW 6 M GLU 7 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale14 covale both ? C GLU 7 C ? ? ? 1_555 C 1AC 8 N ? ? M GLU 7 M 1AC 8 1_555 ? ? ? ? ? ? ? 1.367 ? ? covale15 covale both ? C 1AC 8 C ? ? ? 1_555 C LEU 9 N ? ? M 1AC 8 M LEU 9 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale16 covale both ? C LEU 9 C ? ? ? 1_555 C NH2 10 N ? ? M LEU 9 M NH2 10 1_555 ? ? ? ? ? ? ? 1.345 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 17 ? PRO A 18 ? ARG A 28 PRO A 29 A 2 LEU A 95 ? VAL A 96 ? LEU A 106 VAL A 107 B 1 TYR A 55 ? ASP A 56 ? TYR A 66 ASP A 67 B 2 GLU A 59 ? TYR A 64 ? GLU A 70 TYR A 75 B 3 SER A 78 ? SER A 80 ? SER A 89 SER A 91 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 17 ? N ARG A 28 O VAL A 96 ? O VAL A 107 B 1 2 N ASP A 56 ? N ASP A 67 O MET A 62 ? O MET A 73 B 2 3 N VAL A 63 ? N VAL A 74 O PHE A 79 ? O PHE A 90 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MPD _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE MPD A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ALA A 28 ? ALA A 39 . ? 3_655 ? 2 AC1 5 VAL A 51 ? VAL A 62 . ? 3_655 ? 3 AC1 5 PRO A 84 ? PRO A 95 . ? 1_555 ? 4 AC1 5 TYR A 88 ? TYR A 99 . ? 1_555 ? 5 AC1 5 6CW C 6 ? 6CW M 6 . ? 1_555 ? # _atom_sites.entry_id 3FEA _atom_sites.fract_transf_matrix[1][1] 0.023669 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023669 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014195 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 12 ? ? ? A . n A 1 2 PRO 2 13 ? ? ? A . n A 1 3 ASP 3 14 ? ? ? A . n A 1 4 SER 4 15 ? ? ? A . n A 1 5 ALA 5 16 ? ? ? A . n A 1 6 SER 6 17 ? ? ? A . n A 1 7 ARG 7 18 ? ? ? A . n A 1 8 ILE 8 19 ? ? ? A . n A 1 9 SER 9 20 ? ? ? A . n A 1 10 PRO 10 21 ? ? ? A . n A 1 11 GLY 11 22 ? ? ? A . n A 1 12 GLN 12 23 ? ? ? A . n A 1 13 ILE 13 24 ? ? ? A . n A 1 14 ASN 14 25 ? ? ? A . n A 1 15 GLN 15 26 26 GLN GLN A . n A 1 16 VAL 16 27 27 VAL VAL A . n A 1 17 ARG 17 28 28 ARG ARG A . n A 1 18 PRO 18 29 29 PRO PRO A . n A 1 19 LYS 19 30 30 LYS LYS A . n A 1 20 LEU 20 31 31 LEU LEU A . n A 1 21 PRO 21 32 32 PRO PRO A . n A 1 22 LEU 22 33 33 LEU LEU A . n A 1 23 LEU 23 34 34 LEU LEU A . n A 1 24 LYS 24 35 35 LYS LYS A . n A 1 25 ILE 25 36 36 ILE ILE A . n A 1 26 LEU 26 37 37 LEU LEU A . n A 1 27 HIS 27 38 38 HIS HIS A . n A 1 28 ALA 28 39 39 ALA ALA A . n A 1 29 ALA 29 40 40 ALA ALA A . n A 1 30 GLY 30 41 41 GLY GLY A . n A 1 31 ALA 31 42 42 ALA ALA A . n A 1 32 GLN 32 43 43 GLN GLN A . n A 1 33 GLY 33 44 44 GLY GLY A . n A 1 34 GLU 34 45 45 GLU GLU A . n A 1 35 MET 35 46 46 MET MET A . n A 1 36 PHE 36 47 47 PHE PHE A . n A 1 37 THR 37 48 48 THR THR A . n A 1 38 VAL 38 49 49 VAL VAL A . n A 1 39 LYS 39 50 50 LYS LYS A . n A 1 40 GLU 40 51 51 GLU GLU A . n A 1 41 VAL 41 52 52 VAL VAL A . n A 1 42 MET 42 53 53 MET MET A . n A 1 43 HIS 43 54 54 HIS HIS A . n A 1 44 TYR 44 55 55 TYR TYR A . n A 1 45 LEU 45 56 56 LEU LEU A . n A 1 46 GLY 46 57 57 GLY GLY A . n A 1 47 GLN 47 58 58 GLN GLN A . n A 1 48 TYR 48 59 59 TYR TYR A . n A 1 49 ILE 49 60 60 ILE ILE A . n A 1 50 MET 50 61 61 MET MET A . n A 1 51 VAL 51 62 62 VAL VAL A . n A 1 52 LYS 52 63 63 LYS LYS A . n A 1 53 GLN 53 64 64 GLN GLN A . n A 1 54 LEU 54 65 65 LEU LEU A . n A 1 55 TYR 55 66 66 TYR TYR A . n A 1 56 ASP 56 67 67 ASP ASP A . n A 1 57 GLN 57 68 68 GLN GLN A . n A 1 58 GLN 58 69 69 GLN GLN A . n A 1 59 GLU 59 70 70 GLU GLU A . n A 1 60 GLN 60 71 71 GLN GLN A . n A 1 61 HIS 61 72 72 HIS HIS A . n A 1 62 MET 62 73 73 MET MET A . n A 1 63 VAL 63 74 74 VAL VAL A . n A 1 64 TYR 64 75 75 TYR TYR A . n A 1 65 CYS 65 76 76 CYS CYS A . n A 1 66 GLY 66 77 77 GLY GLY A . n A 1 67 GLY 67 78 78 GLY GLY A . n A 1 68 ASP 68 79 79 ASP ASP A . n A 1 69 LEU 69 80 80 LEU LEU A . n A 1 70 LEU 70 81 81 LEU LEU A . n A 1 71 GLY 71 82 82 GLY GLY A . n A 1 72 GLU 72 83 83 GLU GLU A . n A 1 73 LEU 73 84 84 LEU LEU A . n A 1 74 LEU 74 85 85 LEU LEU A . n A 1 75 GLY 75 86 86 GLY GLY A . n A 1 76 ARG 76 87 87 ARG ARG A . n A 1 77 GLN 77 88 88 GLN GLN A . n A 1 78 SER 78 89 89 SER SER A . n A 1 79 PHE 79 90 90 PHE PHE A . n A 1 80 SER 80 91 91 SER SER A . n A 1 81 VAL 81 92 92 VAL VAL A . n A 1 82 LYS 82 93 93 LYS LYS A . n A 1 83 ASP 83 94 94 ASP ASP A . n A 1 84 PRO 84 95 95 PRO PRO A . n A 1 85 SER 85 96 96 SER SER A . n A 1 86 PRO 86 97 97 PRO PRO A . n A 1 87 LEU 87 98 98 LEU LEU A . n A 1 88 TYR 88 99 99 TYR TYR A . n A 1 89 ASP 89 100 100 ASP ASP A . n A 1 90 MET 90 101 101 MET MET A . n A 1 91 LEU 91 102 102 LEU LEU A . n A 1 92 ARG 92 103 103 ARG ARG A . n A 1 93 LYS 93 104 104 LYS LYS A . n A 1 94 ASN 94 105 105 ASN ASN A . n A 1 95 LEU 95 106 106 LEU LEU A . n A 1 96 VAL 96 107 107 VAL VAL A . n A 1 97 THR 97 108 108 THR THR A . n A 1 98 LEU 98 109 ? ? ? A . n A 1 99 ALA 99 110 ? ? ? A . n A 1 100 THR 100 111 ? ? ? A . n B 2 1 ACE 1 1 1 ACE ACE L . n B 2 2 PHE 2 2 2 PHE PHE L . n B 2 3 MET 3 3 3 MET MET L . n B 2 4 AIB 4 4 4 AIB AIB L . n B 2 5 PM3 5 5 5 PM3 PM3 L . n B 2 6 6CW 6 6 6 6CW 6CW L . n B 2 7 GLU 7 7 7 GLU GLU L . n B 2 8 1AC 8 8 8 1AC 1AC L . n B 2 9 LEU 9 9 9 LEU LEU L . n B 2 10 NH2 10 10 10 NH2 NH2 L . n C 2 1 ACE 1 1 1 ACE ACE M . n C 2 2 PHE 2 2 2 PHE PHE M . n C 2 3 MET 3 3 3 MET MET M . n C 2 4 AIB 4 4 4 AIB AIB M . n C 2 5 PM3 5 5 5 PM3 PM3 M . n C 2 6 6CW 6 6 6 6CW 6CW M . n C 2 7 GLU 7 7 7 GLU GLU M . n C 2 8 1AC 8 8 8 1AC 1AC M . n C 2 9 LEU 9 9 9 LEU LEU M . n C 2 10 NH2 10 10 10 NH2 NH2 M . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 MPD 1 1 1 MPD MPD A . E 4 HOH 1 2 2 HOH HOH A . E 4 HOH 2 4 4 HOH HOH A . E 4 HOH 3 5 5 HOH HOH A . E 4 HOH 4 6 6 HOH HOH A . E 4 HOH 5 7 7 HOH HOH A . E 4 HOH 6 8 8 HOH HOH A . E 4 HOH 7 9 9 HOH HOH A . E 4 HOH 8 10 10 HOH HOH A . E 4 HOH 9 11 11 HOH HOH A . E 4 HOH 10 112 1 HOH HOH A . E 4 HOH 11 113 12 HOH HOH A . E 4 HOH 12 114 14 HOH HOH A . E 4 HOH 13 115 15 HOH HOH A . E 4 HOH 14 116 19 HOH HOH A . E 4 HOH 15 117 20 HOH HOH A . E 4 HOH 16 118 21 HOH HOH A . E 4 HOH 17 119 22 HOH HOH A . E 4 HOH 18 120 23 HOH HOH A . E 4 HOH 19 121 24 HOH HOH A . E 4 HOH 20 122 25 HOH HOH A . E 4 HOH 21 123 27 HOH HOH A . E 4 HOH 22 124 28 HOH HOH A . E 4 HOH 23 125 30 HOH HOH A . E 4 HOH 24 126 31 HOH HOH A . E 4 HOH 25 127 32 HOH HOH A . E 4 HOH 26 128 34 HOH HOH A . E 4 HOH 27 129 35 HOH HOH A . E 4 HOH 28 130 38 HOH HOH A . E 4 HOH 29 131 39 HOH HOH A . E 4 HOH 30 132 40 HOH HOH A . E 4 HOH 31 133 41 HOH HOH A . E 4 HOH 32 134 43 HOH HOH A . E 4 HOH 33 135 44 HOH HOH A . E 4 HOH 34 136 45 HOH HOH A . E 4 HOH 35 137 46 HOH HOH A . E 4 HOH 36 138 47 HOH HOH A . E 4 HOH 37 139 49 HOH HOH A . E 4 HOH 38 140 50 HOH HOH A . E 4 HOH 39 141 51 HOH HOH A . E 4 HOH 40 142 53 HOH HOH A . E 4 HOH 41 143 54 HOH HOH A . E 4 HOH 42 144 55 HOH HOH A . E 4 HOH 43 145 57 HOH HOH A . E 4 HOH 44 146 58 HOH HOH A . E 4 HOH 45 147 59 HOH HOH A . E 4 HOH 46 148 60 HOH HOH A . E 4 HOH 47 149 61 HOH HOH A . E 4 HOH 48 150 63 HOH HOH A . E 4 HOH 49 151 65 HOH HOH A . E 4 HOH 50 152 66 HOH HOH A . E 4 HOH 51 153 67 HOH HOH A . E 4 HOH 52 154 69 HOH HOH A . E 4 HOH 53 155 70 HOH HOH A . E 4 HOH 54 156 76 HOH HOH A . E 4 HOH 55 157 73 HOH HOH A . E 4 HOH 56 158 78 HOH HOH A . E 4 HOH 57 159 79 HOH HOH A . E 4 HOH 58 160 80 HOH HOH A . E 4 HOH 59 161 82 HOH HOH A . F 4 HOH 1 11 3 HOH HOH L . F 4 HOH 2 13 13 HOH HOH L . F 4 HOH 3 16 16 HOH HOH L . F 4 HOH 4 17 17 HOH HOH L . F 4 HOH 5 18 18 HOH HOH L . F 4 HOH 6 26 26 HOH HOH L . F 4 HOH 7 29 29 HOH HOH L . F 4 HOH 8 33 33 HOH HOH L . F 4 HOH 9 36 36 HOH HOH L . F 4 HOH 10 37 37 HOH HOH L . F 4 HOH 11 48 48 HOH HOH L . F 4 HOH 12 56 56 HOH HOH L . F 4 HOH 13 62 62 HOH HOH L . F 4 HOH 14 64 64 HOH HOH L . F 4 HOH 15 71 71 HOH HOH L . F 4 HOH 16 74 74 HOH HOH L . F 4 HOH 17 75 75 HOH HOH L . F 4 HOH 18 77 77 HOH HOH L . F 4 HOH 19 156 72 HOH HOH L . G 4 HOH 1 42 42 HOH HOH M . G 4 HOH 2 52 52 HOH HOH M . G 4 HOH 3 68 68 HOH HOH M . G 4 HOH 4 81 81 HOH HOH M . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B AIB 4 L AIB 4 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 2 B PM3 5 L PM3 5 ? PHE ? 3 B 6CW 6 L 6CW 6 ? TRP 6-CHLORO-L-TRYPTOPHAN 4 C AIB 4 M AIB 4 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 5 C PM3 5 M PM3 5 ? PHE ? 6 C 6CW 6 M 6CW 6 ? TRP 6-CHLORO-L-TRYPTOPHAN # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,D,E,F 2 1 C,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1760 ? 1 MORE -29 ? 1 'SSA (A^2)' 5550 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2023-11-01 6 'Structure model' 1 5 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 4 'Structure model' '_struct_ref_seq_dif.details' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 21 6 'Structure model' '_chem_comp_atom.atom_id' 22 6 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 REFMAC 5.5.0039 ? ? ? ? phasing ? ? ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD L GLU 7 ? ? OE2 L GLU 7 ? ? 1.325 1.252 0.073 0.011 N 2 1 CD M GLU 7 ? ? OE1 M GLU 7 ? ? 1.341 1.252 0.089 0.011 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 70 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -157.62 _pdbx_validate_torsion.psi 79.33 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C4 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id MPD _pdbx_validate_chiral.auth_seq_id 1 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 12 ? A GLY 1 2 1 Y 1 A PRO 13 ? A PRO 2 3 1 Y 1 A ASP 14 ? A ASP 3 4 1 Y 1 A SER 15 ? A SER 4 5 1 Y 1 A ALA 16 ? A ALA 5 6 1 Y 1 A SER 17 ? A SER 6 7 1 Y 1 A ARG 18 ? A ARG 7 8 1 Y 1 A ILE 19 ? A ILE 8 9 1 Y 1 A SER 20 ? A SER 9 10 1 Y 1 A PRO 21 ? A PRO 10 11 1 Y 1 A GLY 22 ? A GLY 11 12 1 Y 1 A GLN 23 ? A GLN 12 13 1 Y 1 A ILE 24 ? A ILE 13 14 1 Y 1 A ASN 25 ? A ASN 14 15 1 Y 1 A LEU 109 ? A LEU 98 16 1 Y 1 A ALA 110 ? A ALA 99 17 1 Y 1 A THR 111 ? A THR 100 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1AC CB C N N 1 1AC CG C N N 2 1AC CA C N N 3 1AC C C N N 4 1AC OXT O N N 5 1AC O O N N 6 1AC N N N N 7 1AC HB1 H N N 8 1AC HB2 H N N 9 1AC HG1 H N N 10 1AC HG2 H N N 11 1AC HXT H N N 12 1AC H H N N 13 1AC H2 H N N 14 6CW N N N N 15 6CW CA C N S 16 6CW CB C N N 17 6CW CG C Y N 18 6CW CD2 C Y N 19 6CW CE3 C Y N 20 6CW CE2 C Y N 21 6CW NE1 N Y N 22 6CW CD1 C Y N 23 6CW CZ2 C Y N 24 6CW CH2 C Y N 25 6CW CLL CL N N 26 6CW CZ3 C Y N 27 6CW C C N N 28 6CW O O N N 29 6CW OXT O N N 30 6CW H H N N 31 6CW H2 H N N 32 6CW HA H N N 33 6CW HB2 H N N 34 6CW HB3 H N N 35 6CW HE3 H N N 36 6CW HE1 H N N 37 6CW HD1 H N N 38 6CW HZ2 H N N 39 6CW HZ3 H N N 40 6CW HXT H N N 41 ACE C C N N 42 ACE O O N N 43 ACE CH3 C N N 44 ACE H H N N 45 ACE H1 H N N 46 ACE H2 H N N 47 ACE H3 H N N 48 AIB N N N N 49 AIB CA C N N 50 AIB C C N N 51 AIB O O N N 52 AIB OXT O N N 53 AIB CB1 C N N 54 AIB CB2 C N N 55 AIB H H N N 56 AIB H2 H N N 57 AIB HXT H N N 58 AIB HB11 H N N 59 AIB HB12 H N N 60 AIB HB13 H N N 61 AIB HB21 H N N 62 AIB HB22 H N N 63 AIB HB23 H N N 64 ALA N N N N 65 ALA CA C N S 66 ALA C C N N 67 ALA O O N N 68 ALA CB C N N 69 ALA OXT O N N 70 ALA H H N N 71 ALA H2 H N N 72 ALA HA H N N 73 ALA HB1 H N N 74 ALA HB2 H N N 75 ALA HB3 H N N 76 ALA HXT H N N 77 ARG N N N N 78 ARG CA C N S 79 ARG C C N N 80 ARG O O N N 81 ARG CB C N N 82 ARG CG C N N 83 ARG CD C N N 84 ARG NE N N N 85 ARG CZ C N N 86 ARG NH1 N N N 87 ARG NH2 N N N 88 ARG OXT O N N 89 ARG H H N N 90 ARG H2 H N N 91 ARG HA H N N 92 ARG HB2 H N N 93 ARG HB3 H N N 94 ARG HG2 H N N 95 ARG HG3 H N N 96 ARG HD2 H N N 97 ARG HD3 H N N 98 ARG HE H N N 99 ARG HH11 H N N 100 ARG HH12 H N N 101 ARG HH21 H N N 102 ARG HH22 H N N 103 ARG HXT H N N 104 ASN N N N N 105 ASN CA C N S 106 ASN C C N N 107 ASN O O N N 108 ASN CB C N N 109 ASN CG C N N 110 ASN OD1 O N N 111 ASN ND2 N N N 112 ASN OXT O N N 113 ASN H H N N 114 ASN H2 H N N 115 ASN HA H N N 116 ASN HB2 H N N 117 ASN HB3 H N N 118 ASN HD21 H N N 119 ASN HD22 H N N 120 ASN HXT H N N 121 ASP N N N N 122 ASP CA C N S 123 ASP C C N N 124 ASP O O N N 125 ASP CB C N N 126 ASP CG C N N 127 ASP OD1 O N N 128 ASP OD2 O N N 129 ASP OXT O N N 130 ASP H H N N 131 ASP H2 H N N 132 ASP HA H N N 133 ASP HB2 H N N 134 ASP HB3 H N N 135 ASP HD2 H N N 136 ASP HXT H N N 137 CYS N N N N 138 CYS CA C N R 139 CYS C C N N 140 CYS O O N N 141 CYS CB C N N 142 CYS SG S N N 143 CYS OXT O N N 144 CYS H H N N 145 CYS H2 H N N 146 CYS HA H N N 147 CYS HB2 H N N 148 CYS HB3 H N N 149 CYS HG H N N 150 CYS HXT H N N 151 GLN N N N N 152 GLN CA C N S 153 GLN C C N N 154 GLN O O N N 155 GLN CB C N N 156 GLN CG C N N 157 GLN CD C N N 158 GLN OE1 O N N 159 GLN NE2 N N N 160 GLN OXT O N N 161 GLN H H N N 162 GLN H2 H N N 163 GLN HA H N N 164 GLN HB2 H N N 165 GLN HB3 H N N 166 GLN HG2 H N N 167 GLN HG3 H N N 168 GLN HE21 H N N 169 GLN HE22 H N N 170 GLN HXT H N N 171 GLU N N N N 172 GLU CA C N S 173 GLU C C N N 174 GLU O O N N 175 GLU CB C N N 176 GLU CG C N N 177 GLU CD C N N 178 GLU OE1 O N N 179 GLU OE2 O N N 180 GLU OXT O N N 181 GLU H H N N 182 GLU H2 H N N 183 GLU HA H N N 184 GLU HB2 H N N 185 GLU HB3 H N N 186 GLU HG2 H N N 187 GLU HG3 H N N 188 GLU HE2 H N N 189 GLU HXT H N N 190 GLY N N N N 191 GLY CA C N N 192 GLY C C N N 193 GLY O O N N 194 GLY OXT O N N 195 GLY H H N N 196 GLY H2 H N N 197 GLY HA2 H N N 198 GLY HA3 H N N 199 GLY HXT H N N 200 HIS N N N N 201 HIS CA C N S 202 HIS C C N N 203 HIS O O N N 204 HIS CB C N N 205 HIS CG C Y N 206 HIS ND1 N Y N 207 HIS CD2 C Y N 208 HIS CE1 C Y N 209 HIS NE2 N Y N 210 HIS OXT O N N 211 HIS H H N N 212 HIS H2 H N N 213 HIS HA H N N 214 HIS HB2 H N N 215 HIS HB3 H N N 216 HIS HD1 H N N 217 HIS HD2 H N N 218 HIS HE1 H N N 219 HIS HE2 H N N 220 HIS HXT H N N 221 HOH O O N N 222 HOH H1 H N N 223 HOH H2 H N N 224 ILE N N N N 225 ILE CA C N S 226 ILE C C N N 227 ILE O O N N 228 ILE CB C N S 229 ILE CG1 C N N 230 ILE CG2 C N N 231 ILE CD1 C N N 232 ILE OXT O N N 233 ILE H H N N 234 ILE H2 H N N 235 ILE HA H N N 236 ILE HB H N N 237 ILE HG12 H N N 238 ILE HG13 H N N 239 ILE HG21 H N N 240 ILE HG22 H N N 241 ILE HG23 H N N 242 ILE HD11 H N N 243 ILE HD12 H N N 244 ILE HD13 H N N 245 ILE HXT H N N 246 LEU N N N N 247 LEU CA C N S 248 LEU C C N N 249 LEU O O N N 250 LEU CB C N N 251 LEU CG C N N 252 LEU CD1 C N N 253 LEU CD2 C N N 254 LEU OXT O N N 255 LEU H H N N 256 LEU H2 H N N 257 LEU HA H N N 258 LEU HB2 H N N 259 LEU HB3 H N N 260 LEU HG H N N 261 LEU HD11 H N N 262 LEU HD12 H N N 263 LEU HD13 H N N 264 LEU HD21 H N N 265 LEU HD22 H N N 266 LEU HD23 H N N 267 LEU HXT H N N 268 LYS N N N N 269 LYS CA C N S 270 LYS C C N N 271 LYS O O N N 272 LYS CB C N N 273 LYS CG C N N 274 LYS CD C N N 275 LYS CE C N N 276 LYS NZ N N N 277 LYS OXT O N N 278 LYS H H N N 279 LYS H2 H N N 280 LYS HA H N N 281 LYS HB2 H N N 282 LYS HB3 H N N 283 LYS HG2 H N N 284 LYS HG3 H N N 285 LYS HD2 H N N 286 LYS HD3 H N N 287 LYS HE2 H N N 288 LYS HE3 H N N 289 LYS HZ1 H N N 290 LYS HZ2 H N N 291 LYS HZ3 H N N 292 LYS HXT H N N 293 MET N N N N 294 MET CA C N S 295 MET C C N N 296 MET O O N N 297 MET CB C N N 298 MET CG C N N 299 MET SD S N N 300 MET CE C N N 301 MET OXT O N N 302 MET H H N N 303 MET H2 H N N 304 MET HA H N N 305 MET HB2 H N N 306 MET HB3 H N N 307 MET HG2 H N N 308 MET HG3 H N N 309 MET HE1 H N N 310 MET HE2 H N N 311 MET HE3 H N N 312 MET HXT H N N 313 MPD C1 C N N 314 MPD C2 C N N 315 MPD O2 O N N 316 MPD CM C N N 317 MPD C3 C N N 318 MPD C4 C N S 319 MPD O4 O N N 320 MPD C5 C N N 321 MPD H11 H N N 322 MPD H12 H N N 323 MPD H13 H N N 324 MPD HO2 H N N 325 MPD HM1 H N N 326 MPD HM2 H N N 327 MPD HM3 H N N 328 MPD H31 H N N 329 MPD H32 H N N 330 MPD H4 H N N 331 MPD HO4 H N N 332 MPD H51 H N N 333 MPD H52 H N N 334 MPD H53 H N N 335 NH2 N N N N 336 NH2 HN1 H N N 337 NH2 HN2 H N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PM3 N N N N 362 PM3 CA C N S 363 PM3 CB C N N 364 PM3 CG C Y N 365 PM3 CD1 C Y N 366 PM3 CE1 C Y N 367 PM3 CD2 C Y N 368 PM3 CE2 C Y N 369 PM3 CZ C Y N 370 PM3 CH4 C N N 371 PM3 P P N N 372 PM3 O1 O N N 373 PM3 O2 O N N 374 PM3 O3 O N N 375 PM3 C C N N 376 PM3 OXT O N N 377 PM3 O O N N 378 PM3 H H N N 379 PM3 H2 H N N 380 PM3 HA H N N 381 PM3 HB2 H N N 382 PM3 HB3 H N N 383 PM3 HD1 H N N 384 PM3 HE1 H N N 385 PM3 HD2 H N N 386 PM3 HE2 H N N 387 PM3 HH42 H N N 388 PM3 HH43 H N N 389 PM3 HO1 H N N 390 PM3 HO3 H N N 391 PM3 HXT H N N 392 PRO N N N N 393 PRO CA C N S 394 PRO C C N N 395 PRO O O N N 396 PRO CB C N N 397 PRO CG C N N 398 PRO CD C N N 399 PRO OXT O N N 400 PRO H H N N 401 PRO HA H N N 402 PRO HB2 H N N 403 PRO HB3 H N N 404 PRO HG2 H N N 405 PRO HG3 H N N 406 PRO HD2 H N N 407 PRO HD3 H N N 408 PRO HXT H N N 409 SER N N N N 410 SER CA C N S 411 SER C C N N 412 SER O O N N 413 SER CB C N N 414 SER OG O N N 415 SER OXT O N N 416 SER H H N N 417 SER H2 H N N 418 SER HA H N N 419 SER HB2 H N N 420 SER HB3 H N N 421 SER HG H N N 422 SER HXT H N N 423 THR N N N N 424 THR CA C N S 425 THR C C N N 426 THR O O N N 427 THR CB C N R 428 THR OG1 O N N 429 THR CG2 C N N 430 THR OXT O N N 431 THR H H N N 432 THR H2 H N N 433 THR HA H N N 434 THR HB H N N 435 THR HG1 H N N 436 THR HG21 H N N 437 THR HG22 H N N 438 THR HG23 H N N 439 THR HXT H N N 440 TYR N N N N 441 TYR CA C N S 442 TYR C C N N 443 TYR O O N N 444 TYR CB C N N 445 TYR CG C Y N 446 TYR CD1 C Y N 447 TYR CD2 C Y N 448 TYR CE1 C Y N 449 TYR CE2 C Y N 450 TYR CZ C Y N 451 TYR OH O N N 452 TYR OXT O N N 453 TYR H H N N 454 TYR H2 H N N 455 TYR HA H N N 456 TYR HB2 H N N 457 TYR HB3 H N N 458 TYR HD1 H N N 459 TYR HD2 H N N 460 TYR HE1 H N N 461 TYR HE2 H N N 462 TYR HH H N N 463 TYR HXT H N N 464 VAL N N N N 465 VAL CA C N S 466 VAL C C N N 467 VAL O O N N 468 VAL CB C N N 469 VAL CG1 C N N 470 VAL CG2 C N N 471 VAL OXT O N N 472 VAL H H N N 473 VAL H2 H N N 474 VAL HA H N N 475 VAL HB H N N 476 VAL HG11 H N N 477 VAL HG12 H N N 478 VAL HG13 H N N 479 VAL HG21 H N N 480 VAL HG22 H N N 481 VAL HG23 H N N 482 VAL HXT H N N 483 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1AC CB CG sing N N 1 1AC CB CA sing N N 2 1AC CB HB1 sing N N 3 1AC CB HB2 sing N N 4 1AC CG CA sing N N 5 1AC CG HG1 sing N N 6 1AC CG HG2 sing N N 7 1AC CA C sing N N 8 1AC CA N sing N N 9 1AC C OXT sing N N 10 1AC C O doub N N 11 1AC OXT HXT sing N N 12 1AC N H sing N N 13 1AC N H2 sing N N 14 6CW N CA sing N N 15 6CW N H sing N N 16 6CW N H2 sing N N 17 6CW CA CB sing N N 18 6CW CA C sing N N 19 6CW CA HA sing N N 20 6CW CB CG sing N N 21 6CW CB HB2 sing N N 22 6CW CB HB3 sing N N 23 6CW CG CD2 sing Y N 24 6CW CG CD1 doub Y N 25 6CW CD2 CE3 doub Y N 26 6CW CD2 CE2 sing Y N 27 6CW CE3 CZ3 sing Y N 28 6CW CE3 HE3 sing N N 29 6CW CE2 NE1 sing Y N 30 6CW CE2 CZ2 doub Y N 31 6CW NE1 CD1 sing Y N 32 6CW NE1 HE1 sing N N 33 6CW CD1 HD1 sing N N 34 6CW CZ2 CH2 sing Y N 35 6CW CZ2 HZ2 sing N N 36 6CW CH2 CLL sing N N 37 6CW CH2 CZ3 doub Y N 38 6CW CZ3 HZ3 sing N N 39 6CW C O doub N N 40 6CW C OXT sing N N 41 6CW OXT HXT sing N N 42 ACE C O doub N N 43 ACE C CH3 sing N N 44 ACE C H sing N N 45 ACE CH3 H1 sing N N 46 ACE CH3 H2 sing N N 47 ACE CH3 H3 sing N N 48 AIB N CA sing N N 49 AIB N H sing N N 50 AIB N H2 sing N N 51 AIB CA C sing N N 52 AIB CA CB1 sing N N 53 AIB CA CB2 sing N N 54 AIB C O doub N N 55 AIB C OXT sing N N 56 AIB OXT HXT sing N N 57 AIB CB1 HB11 sing N N 58 AIB CB1 HB12 sing N N 59 AIB CB1 HB13 sing N N 60 AIB CB2 HB21 sing N N 61 AIB CB2 HB22 sing N N 62 AIB CB2 HB23 sing N N 63 ALA N CA sing N N 64 ALA N H sing N N 65 ALA N H2 sing N N 66 ALA CA C sing N N 67 ALA CA CB sing N N 68 ALA CA HA sing N N 69 ALA C O doub N N 70 ALA C OXT sing N N 71 ALA CB HB1 sing N N 72 ALA CB HB2 sing N N 73 ALA CB HB3 sing N N 74 ALA OXT HXT sing N N 75 ARG N CA sing N N 76 ARG N H sing N N 77 ARG N H2 sing N N 78 ARG CA C sing N N 79 ARG CA CB sing N N 80 ARG CA HA sing N N 81 ARG C O doub N N 82 ARG C OXT sing N N 83 ARG CB CG sing N N 84 ARG CB HB2 sing N N 85 ARG CB HB3 sing N N 86 ARG CG CD sing N N 87 ARG CG HG2 sing N N 88 ARG CG HG3 sing N N 89 ARG CD NE sing N N 90 ARG CD HD2 sing N N 91 ARG CD HD3 sing N N 92 ARG NE CZ sing N N 93 ARG NE HE sing N N 94 ARG CZ NH1 sing N N 95 ARG CZ NH2 doub N N 96 ARG NH1 HH11 sing N N 97 ARG NH1 HH12 sing N N 98 ARG NH2 HH21 sing N N 99 ARG NH2 HH22 sing N N 100 ARG OXT HXT sing N N 101 ASN N CA sing N N 102 ASN N H sing N N 103 ASN N H2 sing N N 104 ASN CA C sing N N 105 ASN CA CB sing N N 106 ASN CA HA sing N N 107 ASN C O doub N N 108 ASN C OXT sing N N 109 ASN CB CG sing N N 110 ASN CB HB2 sing N N 111 ASN CB HB3 sing N N 112 ASN CG OD1 doub N N 113 ASN CG ND2 sing N N 114 ASN ND2 HD21 sing N N 115 ASN ND2 HD22 sing N N 116 ASN OXT HXT sing N N 117 ASP N CA sing N N 118 ASP N H sing N N 119 ASP N H2 sing N N 120 ASP CA C sing N N 121 ASP CA CB sing N N 122 ASP CA HA sing N N 123 ASP C O doub N N 124 ASP C OXT sing N N 125 ASP CB CG sing N N 126 ASP CB HB2 sing N N 127 ASP CB HB3 sing N N 128 ASP CG OD1 doub N N 129 ASP CG OD2 sing N N 130 ASP OD2 HD2 sing N N 131 ASP OXT HXT sing N N 132 CYS N CA sing N N 133 CYS N H sing N N 134 CYS N H2 sing N N 135 CYS CA C sing N N 136 CYS CA CB sing N N 137 CYS CA HA sing N N 138 CYS C O doub N N 139 CYS C OXT sing N N 140 CYS CB SG sing N N 141 CYS CB HB2 sing N N 142 CYS CB HB3 sing N N 143 CYS SG HG sing N N 144 CYS OXT HXT sing N N 145 GLN N CA sing N N 146 GLN N H sing N N 147 GLN N H2 sing N N 148 GLN CA C sing N N 149 GLN CA CB sing N N 150 GLN CA HA sing N N 151 GLN C O doub N N 152 GLN C OXT sing N N 153 GLN CB CG sing N N 154 GLN CB HB2 sing N N 155 GLN CB HB3 sing N N 156 GLN CG CD sing N N 157 GLN CG HG2 sing N N 158 GLN CG HG3 sing N N 159 GLN CD OE1 doub N N 160 GLN CD NE2 sing N N 161 GLN NE2 HE21 sing N N 162 GLN NE2 HE22 sing N N 163 GLN OXT HXT sing N N 164 GLU N CA sing N N 165 GLU N H sing N N 166 GLU N H2 sing N N 167 GLU CA C sing N N 168 GLU CA CB sing N N 169 GLU CA HA sing N N 170 GLU C O doub N N 171 GLU C OXT sing N N 172 GLU CB CG sing N N 173 GLU CB HB2 sing N N 174 GLU CB HB3 sing N N 175 GLU CG CD sing N N 176 GLU CG HG2 sing N N 177 GLU CG HG3 sing N N 178 GLU CD OE1 doub N N 179 GLU CD OE2 sing N N 180 GLU OE2 HE2 sing N N 181 GLU OXT HXT sing N N 182 GLY N CA sing N N 183 GLY N H sing N N 184 GLY N H2 sing N N 185 GLY CA C sing N N 186 GLY CA HA2 sing N N 187 GLY CA HA3 sing N N 188 GLY C O doub N N 189 GLY C OXT sing N N 190 GLY OXT HXT sing N N 191 HIS N CA sing N N 192 HIS N H sing N N 193 HIS N H2 sing N N 194 HIS CA C sing N N 195 HIS CA CB sing N N 196 HIS CA HA sing N N 197 HIS C O doub N N 198 HIS C OXT sing N N 199 HIS CB CG sing N N 200 HIS CB HB2 sing N N 201 HIS CB HB3 sing N N 202 HIS CG ND1 sing Y N 203 HIS CG CD2 doub Y N 204 HIS ND1 CE1 doub Y N 205 HIS ND1 HD1 sing N N 206 HIS CD2 NE2 sing Y N 207 HIS CD2 HD2 sing N N 208 HIS CE1 NE2 sing Y N 209 HIS CE1 HE1 sing N N 210 HIS NE2 HE2 sing N N 211 HIS OXT HXT sing N N 212 HOH O H1 sing N N 213 HOH O H2 sing N N 214 ILE N CA sing N N 215 ILE N H sing N N 216 ILE N H2 sing N N 217 ILE CA C sing N N 218 ILE CA CB sing N N 219 ILE CA HA sing N N 220 ILE C O doub N N 221 ILE C OXT sing N N 222 ILE CB CG1 sing N N 223 ILE CB CG2 sing N N 224 ILE CB HB sing N N 225 ILE CG1 CD1 sing N N 226 ILE CG1 HG12 sing N N 227 ILE CG1 HG13 sing N N 228 ILE CG2 HG21 sing N N 229 ILE CG2 HG22 sing N N 230 ILE CG2 HG23 sing N N 231 ILE CD1 HD11 sing N N 232 ILE CD1 HD12 sing N N 233 ILE CD1 HD13 sing N N 234 ILE OXT HXT sing N N 235 LEU N CA sing N N 236 LEU N H sing N N 237 LEU N H2 sing N N 238 LEU CA C sing N N 239 LEU CA CB sing N N 240 LEU CA HA sing N N 241 LEU C O doub N N 242 LEU C OXT sing N N 243 LEU CB CG sing N N 244 LEU CB HB2 sing N N 245 LEU CB HB3 sing N N 246 LEU CG CD1 sing N N 247 LEU CG CD2 sing N N 248 LEU CG HG sing N N 249 LEU CD1 HD11 sing N N 250 LEU CD1 HD12 sing N N 251 LEU CD1 HD13 sing N N 252 LEU CD2 HD21 sing N N 253 LEU CD2 HD22 sing N N 254 LEU CD2 HD23 sing N N 255 LEU OXT HXT sing N N 256 LYS N CA sing N N 257 LYS N H sing N N 258 LYS N H2 sing N N 259 LYS CA C sing N N 260 LYS CA CB sing N N 261 LYS CA HA sing N N 262 LYS C O doub N N 263 LYS C OXT sing N N 264 LYS CB CG sing N N 265 LYS CB HB2 sing N N 266 LYS CB HB3 sing N N 267 LYS CG CD sing N N 268 LYS CG HG2 sing N N 269 LYS CG HG3 sing N N 270 LYS CD CE sing N N 271 LYS CD HD2 sing N N 272 LYS CD HD3 sing N N 273 LYS CE NZ sing N N 274 LYS CE HE2 sing N N 275 LYS CE HE3 sing N N 276 LYS NZ HZ1 sing N N 277 LYS NZ HZ2 sing N N 278 LYS NZ HZ3 sing N N 279 LYS OXT HXT sing N N 280 MET N CA sing N N 281 MET N H sing N N 282 MET N H2 sing N N 283 MET CA C sing N N 284 MET CA CB sing N N 285 MET CA HA sing N N 286 MET C O doub N N 287 MET C OXT sing N N 288 MET CB CG sing N N 289 MET CB HB2 sing N N 290 MET CB HB3 sing N N 291 MET CG SD sing N N 292 MET CG HG2 sing N N 293 MET CG HG3 sing N N 294 MET SD CE sing N N 295 MET CE HE1 sing N N 296 MET CE HE2 sing N N 297 MET CE HE3 sing N N 298 MET OXT HXT sing N N 299 MPD C1 C2 sing N N 300 MPD C1 H11 sing N N 301 MPD C1 H12 sing N N 302 MPD C1 H13 sing N N 303 MPD C2 O2 sing N N 304 MPD C2 CM sing N N 305 MPD C2 C3 sing N N 306 MPD O2 HO2 sing N N 307 MPD CM HM1 sing N N 308 MPD CM HM2 sing N N 309 MPD CM HM3 sing N N 310 MPD C3 C4 sing N N 311 MPD C3 H31 sing N N 312 MPD C3 H32 sing N N 313 MPD C4 O4 sing N N 314 MPD C4 C5 sing N N 315 MPD C4 H4 sing N N 316 MPD O4 HO4 sing N N 317 MPD C5 H51 sing N N 318 MPD C5 H52 sing N N 319 MPD C5 H53 sing N N 320 NH2 N HN1 sing N N 321 NH2 N HN2 sing N N 322 PHE N CA sing N N 323 PHE N H sing N N 324 PHE N H2 sing N N 325 PHE CA C sing N N 326 PHE CA CB sing N N 327 PHE CA HA sing N N 328 PHE C O doub N N 329 PHE C OXT sing N N 330 PHE CB CG sing N N 331 PHE CB HB2 sing N N 332 PHE CB HB3 sing N N 333 PHE CG CD1 doub Y N 334 PHE CG CD2 sing Y N 335 PHE CD1 CE1 sing Y N 336 PHE CD1 HD1 sing N N 337 PHE CD2 CE2 doub Y N 338 PHE CD2 HD2 sing N N 339 PHE CE1 CZ doub Y N 340 PHE CE1 HE1 sing N N 341 PHE CE2 CZ sing Y N 342 PHE CE2 HE2 sing N N 343 PHE CZ HZ sing N N 344 PHE OXT HXT sing N N 345 PM3 N CA sing N N 346 PM3 N H sing N N 347 PM3 N H2 sing N N 348 PM3 CA CB sing N N 349 PM3 CA C sing N N 350 PM3 CA HA sing N N 351 PM3 CB CG sing N N 352 PM3 CB HB2 sing N N 353 PM3 CB HB3 sing N N 354 PM3 CG CD1 sing Y N 355 PM3 CG CD2 doub Y N 356 PM3 CD1 CE1 doub Y N 357 PM3 CD1 HD1 sing N N 358 PM3 CE1 CZ sing Y N 359 PM3 CE1 HE1 sing N N 360 PM3 CD2 CE2 sing Y N 361 PM3 CD2 HD2 sing N N 362 PM3 CE2 CZ doub Y N 363 PM3 CE2 HE2 sing N N 364 PM3 CZ CH4 sing N N 365 PM3 CH4 P sing N N 366 PM3 CH4 HH42 sing N N 367 PM3 CH4 HH43 sing N N 368 PM3 P O1 sing N N 369 PM3 P O2 doub N N 370 PM3 P O3 sing N N 371 PM3 O1 HO1 sing N N 372 PM3 O3 HO3 sing N N 373 PM3 C OXT sing N N 374 PM3 C O doub N N 375 PM3 OXT HXT sing N N 376 PRO N CA sing N N 377 PRO N CD sing N N 378 PRO N H sing N N 379 PRO CA C sing N N 380 PRO CA CB sing N N 381 PRO CA HA sing N N 382 PRO C O doub N N 383 PRO C OXT sing N N 384 PRO CB CG sing N N 385 PRO CB HB2 sing N N 386 PRO CB HB3 sing N N 387 PRO CG CD sing N N 388 PRO CG HG2 sing N N 389 PRO CG HG3 sing N N 390 PRO CD HD2 sing N N 391 PRO CD HD3 sing N N 392 PRO OXT HXT sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 THR N CA sing N N 407 THR N H sing N N 408 THR N H2 sing N N 409 THR CA C sing N N 410 THR CA CB sing N N 411 THR CA HA sing N N 412 THR C O doub N N 413 THR C OXT sing N N 414 THR CB OG1 sing N N 415 THR CB CG2 sing N N 416 THR CB HB sing N N 417 THR OG1 HG1 sing N N 418 THR CG2 HG21 sing N N 419 THR CG2 HG22 sing N N 420 THR CG2 HG23 sing N N 421 THR OXT HXT sing N N 422 TYR N CA sing N N 423 TYR N H sing N N 424 TYR N H2 sing N N 425 TYR CA C sing N N 426 TYR CA CB sing N N 427 TYR CA HA sing N N 428 TYR C O doub N N 429 TYR C OXT sing N N 430 TYR CB CG sing N N 431 TYR CB HB2 sing N N 432 TYR CB HB3 sing N N 433 TYR CG CD1 doub Y N 434 TYR CG CD2 sing Y N 435 TYR CD1 CE1 sing Y N 436 TYR CD1 HD1 sing N N 437 TYR CD2 CE2 doub Y N 438 TYR CD2 HD2 sing N N 439 TYR CE1 CZ doub Y N 440 TYR CE1 HE1 sing N N 441 TYR CE2 CZ sing Y N 442 TYR CE2 HE2 sing N N 443 TYR CZ OH sing N N 444 TYR OH HH sing N N 445 TYR OXT HXT sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3FE7 _pdbx_initial_refinement_model.details 'PDB ENTRY 3FE7' #