HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 01-DEC-08 3FEZ TITLE CRYSTAL STRUCTURE OF UNCHARACTERIZED FERREDOXIN FOLD PROTEIN RELATED TITLE 2 TO ANTIBIOTIC BIOSYNTHESIS MONOOXYGENASES (YP_014836.1) FROM LISTERIA TITLE 3 MONOCYTOGENES 4B F2365 AT 2.10 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED FERREDOXIN FOLD PROTEIN RELATED TO COMPND 3 ANTIBIOTIC BIOSYNTHESIS MONOOXYGENASES; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES STR. 4B F2365; SOURCE 3 ORGANISM_TAXID: 265669; SOURCE 4 GENE: LMOF2365_2246, YP_014836.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_014836.1, UNCHARACTERIZED FERREDOXIN FOLD PROTEIN RELATED TO KEYWDS 2 ANTIBIOTIC BIOSYNTHESIS MONOOXYGENASES, STRUCTURAL GENOMICS, JOINT KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 4 PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3FEZ 1 SEQADV REVDAT 4 24-JUL-19 3FEZ 1 REMARK LINK REVDAT 3 01-NOV-17 3FEZ 1 REMARK REVDAT 2 13-JUL-11 3FEZ 1 VERSN REVDAT 1 16-DEC-08 3FEZ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF UNCHARACTERIZED FERREDOXIN FOLD PROTEIN JRNL TITL 2 RELATED TO ANTIBIOTIC BIOSYNTHESIS MONOOXYGENASES JRNL TITL 3 (YP_014836.1) FROM LISTERIA MONOCYTOGENES 4B F2365 AT 2.10 A JRNL TITL 4 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 20282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1039 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1287 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1360 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 36.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.11000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.149 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.220 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1475 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 987 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1999 ; 1.289 ; 1.931 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2407 ; 0.771 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 184 ; 4.333 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;28.369 ;24.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 256 ;12.262 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;18.940 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 210 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1683 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 324 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 289 ; 0.235 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 950 ; 0.184 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 720 ; 0.192 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 739 ; 0.089 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 124 ; 0.165 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.035 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.239 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 40 ; 0.218 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.182 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 956 ; 0.843 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 363 ; 0.144 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1435 ; 1.242 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 655 ; 1.720 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 564 ; 2.343 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -6 A 162 REMARK 3 ORIGIN FOR THE GROUP (A): 61.9400 14.3165 17.2999 REMARK 3 T TENSOR REMARK 3 T11: -0.0582 T22: -0.1401 REMARK 3 T33: -0.1133 T12: 0.1047 REMARK 3 T13: -0.0192 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.5646 L22: 4.0281 REMARK 3 L33: 3.4719 L12: -1.1572 REMARK 3 L13: -0.6955 L23: -0.0715 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: -0.0377 S13: 0.0207 REMARK 3 S21: -0.2048 S22: 0.0712 S23: 0.0658 REMARK 3 S31: -0.3457 S32: -0.1386 S33: -0.0919 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS REMARK 3 ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REMARK 3 REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. REMARK 4 REMARK 4 3FEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94645,0.97966 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR MAR300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20290 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 28.976 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2000M NH4H2PO3, 20.0000% PEG-3350, REMARK 280 NO BUFFER PH 4.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.46000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 142.92000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 107.19000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 178.65000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.73000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.46000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 142.92000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 178.65000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 107.19000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 35.73000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 SER A 163 REMARK 465 HIS A 164 REMARK 465 ASP A 165 REMARK 465 ALA A 166 REMARK 465 LYS A 167 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A -6 CD OE1 OE2 REMARK 470 TYR A 21 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 45 CE NZ REMARK 470 GLN A 88 CD OE1 NE2 REMARK 470 LYS A 136 CE NZ REMARK 470 GLU A 137 CG CD OE1 OE2 REMARK 470 LYS A 143 CD CE NZ REMARK 470 LYS A 144 CE NZ REMARK 470 GLN A 148 CG CD OE1 NE2 REMARK 470 SER A 149 CB OG REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE A 142 SE MSE A 142 CE -0.376 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 46 -82.30 -122.95 REMARK 500 ASN A 112 42.93 -83.43 REMARK 500 ASN A 112 42.93 -88.40 REMARK 500 GLN A 148 -134.68 -93.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 390913 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. DBREF 3FEZ A 1 167 UNP Q71XF2 Q71XF2_LISMF 1 167 SEQADV 3FEZ MSE A -18 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ GLY A -17 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ SER A -16 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ ASP A -15 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ LYS A -14 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ ILE A -13 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ HIS A -12 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ HIS A -11 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ HIS A -10 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ HIS A -9 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ HIS A -8 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ HIS A -7 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ GLU A -6 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ ASN A -5 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ LEU A -4 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ TYR A -3 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ PHE A -2 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ GLN A -1 UNP Q71XF2 EXPRESSION TAG SEQADV 3FEZ GLY A 0 UNP Q71XF2 EXPRESSION TAG SEQRES 1 A 186 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 186 ASN LEU TYR PHE GLN GLY MSE LYS LYS VAL PHE ILE THR SEQRES 3 A 186 THR GLY THR GLU HIS TYR LEU ARG GLN LEU MSE ALA ASN SEQRES 4 A 186 TYR THR GLY GLY ASN VAL THR LEU LEU GLN ASN PHE SER SEQRES 5 A 186 GLN SER LEU LEU TYR GLN GLU SER THR GLY GLU LYS LEU SEQRES 6 A 186 PHE GLN GLU GLY ALA GLU TYR ARG VAL LEU GLN SER SER SEQRES 7 A 186 GLY SER LEU LYS GLY PHE GLY VAL VAL VAL PHE GLU TYR SEQRES 8 A 186 ILE HIS LEU ARG ASP GLU GLU ILE PRO ILE PHE LEU GLN SEQRES 9 A 186 MSE TYR GLN ARG ALA SER LEU HIS PHE SER GLU THR PRO SEQRES 10 A 186 GLY LEU GLN SER THR LYS LEU THR LYS ALA MSE ASN MSE SEQRES 11 A 186 ASN LYS PHE LEU ILE ILE SER PHE TRP ASP SER GLU VAL SEQRES 12 A 186 PHE PHE HIS ASP TRP LYS LYS THR PRO LEU SER LYS GLU SEQRES 13 A 186 ILE THR ASN ILE MSE LYS LYS ASN ASN THR GLN SER GLY SEQRES 14 A 186 PHE SER HIS GLU ASP ILE TYR HIS TYR PRO GLU PHE SER SEQRES 15 A 186 HIS ASP ALA LYS MODRES 3FEZ MSE A 1 MET SELENOMETHIONINE MODRES 3FEZ MSE A 18 MET SELENOMETHIONINE MODRES 3FEZ MSE A 86 MET SELENOMETHIONINE MODRES 3FEZ MSE A 109 MET SELENOMETHIONINE MODRES 3FEZ MSE A 111 MET SELENOMETHIONINE MODRES 3FEZ MSE A 142 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 18 16 HET MSE A 86 16 HET MSE A 109 8 HET MSE A 111 16 HET MSE A 142 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 HOH *84(H2 O) HELIX 1 1 ASN A -5 GLY A 0 1 6 HELIX 2 2 THR A 10 TYR A 21 1 12 HELIX 3 3 ARG A 76 GLU A 78 5 3 HELIX 4 4 GLU A 79 LEU A 92 1 14 HELIX 5 5 HIS A 93 THR A 97 5 5 HELIX 6 6 SER A 122 LYS A 130 1 9 HELIX 7 7 THR A 132 GLN A 148 1 17 SHEET 1 A 9 LYS A 2 GLY A 9 0 SHEET 2 A 9 SER A 35 THR A 42 -1 O SER A 41 N LYS A 3 SHEET 3 A 9 THR A 27 GLN A 30 -1 N LEU A 29 O LEU A 36 SHEET 4 A 9 HIS A 153 HIS A 158 -1 O HIS A 158 N GLN A 30 SHEET 5 A 9 VAL A 67 HIS A 74 -1 N VAL A 68 O TYR A 157 SHEET 6 A 9 LYS A 113 TRP A 120 -1 O PHE A 114 N ILE A 73 SHEET 7 A 9 LEU A 100 ALA A 108 -1 N GLN A 101 O PHE A 119 SHEET 8 A 9 ALA A 51 GLY A 60 -1 N ARG A 54 O LYS A 107 SHEET 9 A 9 LYS A 2 GLY A 9 -1 N LYS A 2 O VAL A 55 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C LEU A 17 N AMSE A 18 1555 1555 1.33 LINK C LEU A 17 N BMSE A 18 1555 1555 1.33 LINK C AMSE A 18 N ALA A 19 1555 1555 1.33 LINK C BMSE A 18 N ALA A 19 1555 1555 1.33 LINK C AGLN A 85 N AMSE A 86 1555 1555 1.33 LINK C BGLN A 85 N BMSE A 86 1555 1555 1.34 LINK C AMSE A 86 N TYR A 87 1555 1555 1.33 LINK C BMSE A 86 N TYR A 87 1555 1555 1.33 LINK C ALA A 108 N MSE A 109 1555 1555 1.33 LINK C MSE A 109 N ASN A 110 1555 1555 1.34 LINK C ASN A 110 N AMSE A 111 1555 1555 1.33 LINK C ASN A 110 N BMSE A 111 1555 1555 1.33 LINK C AMSE A 111 N ASN A 112 1555 1555 1.34 LINK C BMSE A 111 N ASN A 112 1555 1555 1.32 LINK C ILE A 141 N MSE A 142 1555 1555 1.32 LINK C MSE A 142 N LYS A 143 1555 1555 1.33 CRYST1 73.220 73.220 214.380 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013657 0.007885 0.000000 0.00000 SCALE2 0.000000 0.015770 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004665 0.00000