data_3FGE # _entry.id 3FGE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FGE pdb_00003fge 10.2210/pdb3fge/pdb RCSB RCSB050558 ? ? WWPDB D_1000050558 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 375055 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3FGE _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-12-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of putative flavin reductase with split barrel domain (YP_750721.1) from SHEWANELLA FRIGIDIMARINA NCIMB 400 at 1.74 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3FGE _cell.length_a 58.351 _cell.length_b 65.502 _cell.length_c 96.791 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FGE _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative flavin reductase with split barrel domain' 22918.105 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 147 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)HFSKEHINALETRTRAHFINSLSGFKSANLIGTQDRQGNTNLSIVSSVIHLGANPPL(MSE)G(MSE)IIRPHS VPRHTFENI(MSE)QTGLYTINHVNQSIYEQAHQTSARYDKDESEFEATGLTPEYLSDFCAPFVKESRLKYSVKLVEHQH LAINGTEFVIGEIVDVYVDDNAVQTDGFIDLQAIDTVAISGLDCYYTGDKLARLPYAKK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMHFSKEHINALETRTRAHFINSLSGFKSANLIGTQDRQGNTNLSIVSSVIHLGANPPLMGMIIRPHSVPRHTFENIMQT GLYTINHVNQSIYEQAHQTSARYDKDESEFEATGLTPEYLSDFCAPFVKESRLKYSVKLVEHQHLAINGTEFVIGEIVDV YVDDNAVQTDGFIDLQAIDTVAISGLDCYYTGDKLARLPYAKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 375055 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 HIS n 1 4 PHE n 1 5 SER n 1 6 LYS n 1 7 GLU n 1 8 HIS n 1 9 ILE n 1 10 ASN n 1 11 ALA n 1 12 LEU n 1 13 GLU n 1 14 THR n 1 15 ARG n 1 16 THR n 1 17 ARG n 1 18 ALA n 1 19 HIS n 1 20 PHE n 1 21 ILE n 1 22 ASN n 1 23 SER n 1 24 LEU n 1 25 SER n 1 26 GLY n 1 27 PHE n 1 28 LYS n 1 29 SER n 1 30 ALA n 1 31 ASN n 1 32 LEU n 1 33 ILE n 1 34 GLY n 1 35 THR n 1 36 GLN n 1 37 ASP n 1 38 ARG n 1 39 GLN n 1 40 GLY n 1 41 ASN n 1 42 THR n 1 43 ASN n 1 44 LEU n 1 45 SER n 1 46 ILE n 1 47 VAL n 1 48 SER n 1 49 SER n 1 50 VAL n 1 51 ILE n 1 52 HIS n 1 53 LEU n 1 54 GLY n 1 55 ALA n 1 56 ASN n 1 57 PRO n 1 58 PRO n 1 59 LEU n 1 60 MSE n 1 61 GLY n 1 62 MSE n 1 63 ILE n 1 64 ILE n 1 65 ARG n 1 66 PRO n 1 67 HIS n 1 68 SER n 1 69 VAL n 1 70 PRO n 1 71 ARG n 1 72 HIS n 1 73 THR n 1 74 PHE n 1 75 GLU n 1 76 ASN n 1 77 ILE n 1 78 MSE n 1 79 GLN n 1 80 THR n 1 81 GLY n 1 82 LEU n 1 83 TYR n 1 84 THR n 1 85 ILE n 1 86 ASN n 1 87 HIS n 1 88 VAL n 1 89 ASN n 1 90 GLN n 1 91 SER n 1 92 ILE n 1 93 TYR n 1 94 GLU n 1 95 GLN n 1 96 ALA n 1 97 HIS n 1 98 GLN n 1 99 THR n 1 100 SER n 1 101 ALA n 1 102 ARG n 1 103 TYR n 1 104 ASP n 1 105 LYS n 1 106 ASP n 1 107 GLU n 1 108 SER n 1 109 GLU n 1 110 PHE n 1 111 GLU n 1 112 ALA n 1 113 THR n 1 114 GLY n 1 115 LEU n 1 116 THR n 1 117 PRO n 1 118 GLU n 1 119 TYR n 1 120 LEU n 1 121 SER n 1 122 ASP n 1 123 PHE n 1 124 CYS n 1 125 ALA n 1 126 PRO n 1 127 PHE n 1 128 VAL n 1 129 LYS n 1 130 GLU n 1 131 SER n 1 132 ARG n 1 133 LEU n 1 134 LYS n 1 135 TYR n 1 136 SER n 1 137 VAL n 1 138 LYS n 1 139 LEU n 1 140 VAL n 1 141 GLU n 1 142 HIS n 1 143 GLN n 1 144 HIS n 1 145 LEU n 1 146 ALA n 1 147 ILE n 1 148 ASN n 1 149 GLY n 1 150 THR n 1 151 GLU n 1 152 PHE n 1 153 VAL n 1 154 ILE n 1 155 GLY n 1 156 GLU n 1 157 ILE n 1 158 VAL n 1 159 ASP n 1 160 VAL n 1 161 TYR n 1 162 VAL n 1 163 ASP n 1 164 ASP n 1 165 ASN n 1 166 ALA n 1 167 VAL n 1 168 GLN n 1 169 THR n 1 170 ASP n 1 171 GLY n 1 172 PHE n 1 173 ILE n 1 174 ASP n 1 175 LEU n 1 176 GLN n 1 177 ALA n 1 178 ILE n 1 179 ASP n 1 180 THR n 1 181 VAL n 1 182 ALA n 1 183 ILE n 1 184 SER n 1 185 GLY n 1 186 LEU n 1 187 ASP n 1 188 CYS n 1 189 TYR n 1 190 TYR n 1 191 THR n 1 192 GLY n 1 193 ASP n 1 194 LYS n 1 195 LEU n 1 196 ALA n 1 197 ARG n 1 198 LEU n 1 199 PRO n 1 200 TYR n 1 201 ALA n 1 202 LYS n 1 203 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Sfri_2037, YP_750721.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella frigidimarina NCIMB 400' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 318167 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q082D2_SHEFN _struct_ref.pdbx_db_accession Q082D2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHFSKEHINALETRTRAHFINSLSGFKSANLIGTQDRQGNTNLSIVSSVIHLGANPPLMGMIIRPHSVPRHTFENIMQTG LYTINHVNQSIYEQAHQTSARYDKDESEFEATGLTPEYLSDFCAPFVKESRLKYSVKLVEHQHLAINGTEFVIGEIVDVY VDDNAVQTDGFIDLQAIDTVAISGLDCYYTGDKLARLPYAKK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FGE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 203 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q082D2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 202 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 202 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3FGE _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q082D2 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3FGE # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 39.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M Ca(OAc)2, 20.0000% PEG-3000, 0.1M TRIS pH 7.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.details 'Adjustable focusing mirrors in K-B geometry' _diffrn_detector.pdbx_collection_date 2008-10-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) Double Crystal Monochrometer' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.94645 1.0 2 0.97967 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_wavelength_list 0.94645,0.97967 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 3FGE _reflns.d_resolution_high 1.74 _reflns.d_resolution_low 27.929 _reflns.number_obs 19361 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_netI_over_sigmaI 11.8 _reflns.pdbx_Rsym_value 0.089 _reflns.pdbx_redundancy 3.600 _reflns.percent_possible_obs 99.700 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 18.592 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.74 1.79 ? 4317 ? 0.589 1.8 0.589 ? 3.20 ? 1346 96.90 1 1 1.79 1.83 ? 5006 ? 0.464 2.6 0.464 ? 3.60 ? 1397 100.00 2 1 1.83 1.89 ? 4862 ? 0.376 3.3 0.376 ? 3.70 ? 1332 99.90 3 1 1.89 1.95 ? 4743 ? 0.291 4.3 0.291 ? 3.60 ? 1308 100.00 4 1 1.95 2.01 ? 4722 ? 0.252 5.1 0.252 ? 3.70 ? 1272 100.00 5 1 2.01 2.08 ? 4479 ? 0.191 6.9 0.191 ? 3.70 ? 1218 100.00 6 1 2.08 2.16 ? 4320 ? 0.170 8.0 0.170 ? 3.70 ? 1174 100.00 7 1 2.16 2.25 ? 4193 ? 0.139 9.7 0.139 ? 3.70 ? 1144 100.00 8 1 2.25 2.35 ? 4032 ? 0.128 10.9 0.128 ? 3.70 ? 1094 100.00 9 1 2.35 2.46 ? 3900 ? 0.117 11.9 0.117 ? 3.70 ? 1062 100.00 10 1 2.46 2.59 ? 3676 ? 0.101 13.9 0.101 ? 3.70 ? 998 100.00 11 1 2.59 2.75 ? 3530 ? 0.085 15.5 0.085 ? 3.70 ? 960 100.00 12 1 2.75 2.94 ? 3271 ? 0.075 18.6 0.075 ? 3.70 ? 891 99.90 13 1 2.94 3.18 ? 2990 ? 0.073 21.1 0.073 ? 3.60 ? 826 100.00 14 1 3.18 3.48 ? 2750 ? 0.068 24.6 0.068 ? 3.50 ? 778 100.00 15 1 3.48 3.89 ? 2549 ? 0.053 27.6 0.053 ? 3.60 ? 712 100.00 16 1 3.89 4.49 ? 2232 ? 0.048 29.0 0.048 ? 3.60 ? 627 100.00 17 1 4.49 5.50 ? 1928 ? 0.045 28.9 0.045 ? 3.50 ? 546 100.00 18 1 5.50 7.78 ? 1468 ? 0.052 25.3 0.052 ? 3.50 ? 424 100.00 19 1 7.78 27.93 ? 790 ? 0.054 25.0 0.054 ? 3.10 ? 252 97.80 20 1 # _refine.entry_id 3FGE _refine.ls_d_res_high 1.740 _refine.ls_d_res_low 27.929 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.740 _refine.ls_number_reflns_obs 19333 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. UNEXPLAINED ELECTRON DENSITY NEAR THE SIDECHAIN OF CYS 123 WAS NOT MODELED. 5.CA IONs FROM CRYSTALLIZATION ARE MODELED INTO THIS STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.169 _refine.ls_R_factor_R_work 0.167 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.214 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 988 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.627 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.650 _refine.aniso_B[2][2] 1.450 _refine.aniso_B[3][3] -0.800 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.114 _refine.pdbx_overall_ESU_R_Free 0.116 _refine.overall_SU_ML 0.078 _refine.overall_SU_B 4.646 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 63.57 _refine.B_iso_min 8.93 _refine.occupancy_max 1.00 _refine.occupancy_min 0.20 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1498 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 147 _refine_hist.number_atoms_total 1651 _refine_hist.d_res_high 1.740 _refine_hist.d_res_low 27.929 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1605 0.018 0.021 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 996 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2195 1.680 1.937 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 2455 1.016 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 212 4.679 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 75 34.320 25.467 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 245 10.449 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 4 17.830 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 252 0.059 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1868 0.008 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 316 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 335 0.214 0.300 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1049 0.181 0.300 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 813 0.177 0.500 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 816 0.090 0.500 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 213 0.224 0.500 ? ? r_xyhbond_nbd_other 'X-RAY DIFFRACTION' 2 0.104 0.500 ? ? r_metal_ion_refined 'X-RAY DIFFRACTION' 6 0.128 0.500 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 23 0.235 0.300 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 61 0.217 0.300 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 29 0.239 0.500 ? ? r_symmetry_hbond_other 'X-RAY DIFFRACTION' 1 0.139 0.500 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1061 2.315 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 417 0.681 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1662 3.261 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 617 4.998 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 533 6.561 11.000 ? ? # _refine_ls_shell.d_res_high 1.740 _refine_ls_shell.d_res_low 1.785 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.680 _refine_ls_shell.number_reflns_R_work 1254 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.230 _refine_ls_shell.R_factor_R_free 0.270 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1339 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FGE _struct.title ;Crystal structure of putative flavin reductase with split barrel domain (YP_750721.1) from SHEWANELLA FRIGIDIMARINA NCIMB 400 at 1.74 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_750721.1, putative flavin reductase with split barrel domain, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Unknown function, Oxidoreductase ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3FGE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY INDICATES A DIMER IS A BIOLOGICALLY SIGNIFICANT OLIGIOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? LEU A 12 ? SER A 4 LEU A 11 1 ? 8 HELX_P HELX_P2 2 GLU A 13 ? LEU A 24 ? GLU A 12 LEU A 23 1 ? 12 HELX_P HELX_P3 3 PRO A 70 ? GLY A 81 ? PRO A 69 GLY A 80 1 ? 12 HELX_P HELX_P4 4 ILE A 92 ? THR A 99 ? ILE A 91 THR A 98 1 ? 8 HELX_P HELX_P5 5 SER A 108 ? THR A 113 ? SER A 107 THR A 112 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A HIS 3 N ? ? A MSE 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A LEU 59 C ? ? ? 1_555 A MSE 60 N ? ? A LEU 58 A MSE 59 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A MSE 60 C ? ? ? 1_555 A GLY 61 N ? ? A MSE 59 A GLY 60 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A GLY 61 C ? ? ? 1_555 A MSE 62 N ? ? A GLY 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? A MSE 62 C ? ? ? 1_555 A ILE 63 N ? ? A MSE 61 A ILE 62 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A ILE 77 C ? ? ? 1_555 A MSE 78 N ? ? A ILE 76 A MSE 77 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale8 covale both ? A MSE 78 C ? ? ? 1_555 A GLN 79 N ? ? A MSE 77 A GLN 78 1_555 ? ? ? ? ? ? ? 1.337 ? ? metalc1 metalc ? ? A PHE 110 O ? ? ? 1_555 B CA . CA ? ? A PHE 109 A CA 203 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc2 metalc ? ? A THR 113 O ? ? ? 1_555 B CA . CA ? ? A THR 112 A CA 203 1_555 ? ? ? ? ? ? ? 2.504 ? ? metalc3 metalc ? ? A LEU 115 O ? ? ? 1_555 B CA . CA ? ? A LEU 114 A CA 203 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 203 A HOH 225 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 203 A HOH 285 1_555 ? ? ? ? ? ? ? 2.302 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 204 A HOH 226 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 204 A HOH 265 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 204 A HOH 291 1_555 ? ? ? ? ? ? ? 2.596 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 56 A . ? ASN 55 A PRO 57 A ? PRO 56 A 1 1.93 2 ASN 56 A . ? ASN 55 A PRO 57 A ? PRO 56 A 1 2.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 28 ? SER A 29 ? LYS A 27 SER A 28 A 2 VAL A 181 ? SER A 184 ? VAL A 180 SER A 183 A 3 CYS A 188 ? THR A 191 ? CYS A 187 THR A 190 B 1 THR A 42 ? VAL A 47 ? THR A 41 VAL A 46 B 2 ASN A 31 ? GLN A 36 ? ASN A 30 GLN A 35 B 3 LEU A 82 ? HIS A 87 ? LEU A 81 HIS A 86 B 4 LEU A 133 ? HIS A 144 ? LEU A 132 HIS A 143 B 5 GLU A 151 ? VAL A 162 ? GLU A 150 VAL A 161 B 6 LEU A 59 ? ILE A 64 ? LEU A 58 ILE A 63 B 7 ILE A 51 ? GLY A 54 ? ILE A 50 GLY A 53 C 1 PRO A 117 ? GLU A 118 ? PRO A 116 GLU A 117 C 2 PHE A 127 ? VAL A 128 ? PHE A 126 VAL A 127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 28 ? N LYS A 27 O ILE A 183 ? O ILE A 182 A 2 3 N ALA A 182 ? N ALA A 181 O TYR A 190 ? O TYR A 189 B 1 2 O SER A 45 ? O SER A 44 N ILE A 33 ? N ILE A 32 B 2 3 N LEU A 32 ? N LEU A 31 O ASN A 86 ? O ASN A 85 B 3 4 N HIS A 87 ? N HIS A 86 O LEU A 133 ? O LEU A 132 B 4 5 N LYS A 134 ? N LYS A 133 O TYR A 161 ? O TYR A 160 B 5 6 O GLU A 151 ? O GLU A 150 N ILE A 64 ? N ILE A 63 B 6 7 O GLY A 61 ? O GLY A 60 N ILE A 51 ? N ILE A 50 C 1 2 N GLU A 118 ? N GLU A 117 O PHE A 127 ? O PHE A 126 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 203 ? 6 'BINDING SITE FOR RESIDUE CA A 203' AC2 Software A CA 204 ? 4 'BINDING SITE FOR RESIDUE CA A 204' AC3 Software A EDO 205 ? 6 'BINDING SITE FOR RESIDUE EDO A 205' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 7 ? GLU A 6 . ? 6_554 ? 2 AC1 6 PHE A 110 ? PHE A 109 . ? 1_555 ? 3 AC1 6 THR A 113 ? THR A 112 . ? 1_555 ? 4 AC1 6 LEU A 115 ? LEU A 114 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH A 225 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 285 . ? 1_555 ? 7 AC2 4 ASN A 41 ? ASN A 40 . ? 6_555 ? 8 AC2 4 HOH E . ? HOH A 226 . ? 1_555 ? 9 AC2 4 HOH E . ? HOH A 265 . ? 1_555 ? 10 AC2 4 HOH E . ? HOH A 291 . ? 1_555 ? 11 AC3 6 GLY A 1 ? GLY A 0 . ? 3_655 ? 12 AC3 6 SER A 131 ? SER A 130 . ? 1_555 ? 13 AC3 6 LYS A 134 ? LYS A 133 . ? 1_555 ? 14 AC3 6 VAL A 162 ? VAL A 161 . ? 1_555 ? 15 AC3 6 ASP A 163 ? ASP A 162 . ? 1_555 ? 16 AC3 6 HOH E . ? HOH A 328 . ? 1_555 ? # _atom_sites.entry_id 3FGE _atom_sites.fract_transf_matrix[1][1] 0.017138 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015267 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010332 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 HIS 3 2 2 HIS HIS A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 HIS 8 7 7 HIS HIS A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 THR 16 15 15 THR THR A . n A 1 17 ARG 17 16 16 ARG ARG A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 HIS 19 18 18 HIS HIS A . n A 1 20 PHE 20 19 19 PHE PHE A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 ASN 22 21 21 ASN ASN A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 PHE 27 26 26 PHE PHE A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 SER 29 28 28 SER SER A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 ASN 31 30 30 ASN ASN A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 GLN 36 35 35 GLN GLN A . n A 1 37 ASP 37 36 36 ASP ASP A . n A 1 38 ARG 38 37 37 ARG ARG A . n A 1 39 GLN 39 38 38 GLN GLN A . n A 1 40 GLY 40 39 39 GLY GLY A . n A 1 41 ASN 41 40 40 ASN ASN A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 ASN 43 42 42 ASN ASN A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 SER 45 44 44 SER SER A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 ILE 51 50 50 ILE ILE A . n A 1 52 HIS 52 51 51 HIS HIS A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 ALA 55 54 54 ALA ALA A . n A 1 56 ASN 56 55 55 ASN ASN A . n A 1 57 PRO 57 56 56 PRO PRO A . n A 1 58 PRO 58 57 57 PRO PRO A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 MSE 60 59 59 MSE MSE A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 MSE 62 61 61 MSE MSE A . n A 1 63 ILE 63 62 62 ILE ILE A . n A 1 64 ILE 64 63 63 ILE ILE A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 PRO 66 65 65 PRO PRO A . n A 1 67 HIS 67 66 ? ? ? A . n A 1 68 SER 68 67 ? ? ? A . n A 1 69 VAL 69 68 ? ? ? A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 ARG 71 70 70 ARG ARG A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 PHE 74 73 73 PHE PHE A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 ILE 77 76 76 ILE ILE A . n A 1 78 MSE 78 77 77 MSE MSE A . n A 1 79 GLN 79 78 78 GLN GLN A . n A 1 80 THR 80 79 79 THR THR A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 TYR 83 82 82 TYR TYR A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ASN 86 85 85 ASN ASN A . n A 1 87 HIS 87 86 86 HIS HIS A . n A 1 88 VAL 88 87 87 VAL VAL A . n A 1 89 ASN 89 88 88 ASN ASN A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 TYR 93 92 92 TYR TYR A . n A 1 94 GLU 94 93 93 GLU GLU A . n A 1 95 GLN 95 94 94 GLN GLN A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 HIS 97 96 96 HIS HIS A . n A 1 98 GLN 98 97 97 GLN GLN A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 ARG 102 101 101 ARG ARG A . n A 1 103 TYR 103 102 102 TYR TYR A . n A 1 104 ASP 104 103 103 ASP ASP A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 SER 108 107 107 SER SER A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 PHE 110 109 109 PHE PHE A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 ALA 112 111 111 ALA ALA A . n A 1 113 THR 113 112 112 THR THR A . n A 1 114 GLY 114 113 113 GLY GLY A . n A 1 115 LEU 115 114 114 LEU LEU A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 PRO 117 116 116 PRO PRO A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 TYR 119 118 118 TYR TYR A . n A 1 120 LEU 120 119 119 LEU LEU A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 ASP 122 121 121 ASP ASP A . n A 1 123 PHE 123 122 122 PHE PHE A . n A 1 124 CYS 124 123 123 CYS CYS A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 PHE 127 126 126 PHE PHE A . n A 1 128 VAL 128 127 127 VAL VAL A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 SER 131 130 130 SER SER A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 LEU 133 132 132 LEU LEU A . n A 1 134 LYS 134 133 133 LYS LYS A . n A 1 135 TYR 135 134 134 TYR TYR A . n A 1 136 SER 136 135 135 SER SER A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 LYS 138 137 137 LYS LYS A . n A 1 139 LEU 139 138 138 LEU LEU A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 HIS 142 141 141 HIS HIS A . n A 1 143 GLN 143 142 142 GLN GLN A . n A 1 144 HIS 144 143 143 HIS HIS A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 ILE 147 146 146 ILE ILE A . n A 1 148 ASN 148 147 147 ASN ASN A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 GLU 151 150 150 GLU GLU A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 ILE 154 153 153 ILE ILE A . n A 1 155 GLY 155 154 154 GLY GLY A . n A 1 156 GLU 156 155 155 GLU GLU A . n A 1 157 ILE 157 156 156 ILE ILE A . n A 1 158 VAL 158 157 157 VAL VAL A . n A 1 159 ASP 159 158 158 ASP ASP A . n A 1 160 VAL 160 159 159 VAL VAL A . n A 1 161 TYR 161 160 160 TYR TYR A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 ASP 163 162 162 ASP ASP A . n A 1 164 ASP 164 163 163 ASP ASP A . n A 1 165 ASN 165 164 164 ASN ASN A . n A 1 166 ALA 166 165 165 ALA ALA A . n A 1 167 VAL 167 166 166 VAL VAL A . n A 1 168 GLN 168 167 167 GLN GLN A . n A 1 169 THR 169 168 168 THR THR A . n A 1 170 ASP 170 169 169 ASP ASP A . n A 1 171 GLY 171 170 170 GLY GLY A . n A 1 172 PHE 172 171 171 PHE PHE A . n A 1 173 ILE 173 172 172 ILE ILE A . n A 1 174 ASP 174 173 173 ASP ASP A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 GLN 176 175 175 GLN GLN A . n A 1 177 ALA 177 176 176 ALA ALA A . n A 1 178 ILE 178 177 177 ILE ILE A . n A 1 179 ASP 179 178 178 ASP ASP A . n A 1 180 THR 180 179 179 THR THR A . n A 1 181 VAL 181 180 180 VAL VAL A . n A 1 182 ALA 182 181 181 ALA ALA A . n A 1 183 ILE 183 182 182 ILE ILE A . n A 1 184 SER 184 183 183 SER SER A . n A 1 185 GLY 185 184 184 GLY GLY A . n A 1 186 LEU 186 185 185 LEU LEU A . n A 1 187 ASP 187 186 186 ASP ASP A . n A 1 188 CYS 188 187 187 CYS CYS A . n A 1 189 TYR 189 188 188 TYR TYR A . n A 1 190 TYR 190 189 189 TYR TYR A . n A 1 191 THR 191 190 190 THR THR A . n A 1 192 GLY 192 191 191 GLY GLY A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 LYS 194 193 193 LYS LYS A . n A 1 195 LEU 195 194 194 LEU LEU A . n A 1 196 ALA 196 195 195 ALA ALA A . n A 1 197 ARG 197 196 196 ARG ARG A . n A 1 198 LEU 198 197 197 LEU LEU A . n A 1 199 PRO 199 198 198 PRO PRO A . n A 1 200 TYR 200 199 199 TYR TYR A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 LYS 202 201 ? ? ? A . n A 1 203 LYS 203 202 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 203 1 CA CA A . C 2 CA 1 204 2 CA CA A . D 3 EDO 1 205 3 EDO EDO A . E 4 HOH 1 206 4 HOH HOH A . E 4 HOH 2 207 5 HOH HOH A . E 4 HOH 3 208 6 HOH HOH A . E 4 HOH 4 209 7 HOH HOH A . E 4 HOH 5 210 8 HOH HOH A . E 4 HOH 6 211 9 HOH HOH A . E 4 HOH 7 212 10 HOH HOH A . E 4 HOH 8 213 11 HOH HOH A . E 4 HOH 9 214 12 HOH HOH A . E 4 HOH 10 215 13 HOH HOH A . E 4 HOH 11 216 14 HOH HOH A . E 4 HOH 12 217 15 HOH HOH A . E 4 HOH 13 218 16 HOH HOH A . E 4 HOH 14 219 17 HOH HOH A . E 4 HOH 15 220 18 HOH HOH A . E 4 HOH 16 221 19 HOH HOH A . E 4 HOH 17 222 20 HOH HOH A . E 4 HOH 18 223 21 HOH HOH A . E 4 HOH 19 224 22 HOH HOH A . E 4 HOH 20 225 23 HOH HOH A . E 4 HOH 21 226 24 HOH HOH A . E 4 HOH 22 227 25 HOH HOH A . E 4 HOH 23 228 26 HOH HOH A . E 4 HOH 24 229 27 HOH HOH A . E 4 HOH 25 230 28 HOH HOH A . E 4 HOH 26 231 29 HOH HOH A . E 4 HOH 27 232 30 HOH HOH A . E 4 HOH 28 233 31 HOH HOH A . E 4 HOH 29 234 32 HOH HOH A . E 4 HOH 30 235 33 HOH HOH A . E 4 HOH 31 236 34 HOH HOH A . E 4 HOH 32 237 35 HOH HOH A . E 4 HOH 33 238 36 HOH HOH A . E 4 HOH 34 239 37 HOH HOH A . E 4 HOH 35 240 38 HOH HOH A . E 4 HOH 36 241 39 HOH HOH A . E 4 HOH 37 242 40 HOH HOH A . E 4 HOH 38 243 41 HOH HOH A . E 4 HOH 39 244 42 HOH HOH A . E 4 HOH 40 245 43 HOH HOH A . E 4 HOH 41 246 44 HOH HOH A . E 4 HOH 42 247 45 HOH HOH A . E 4 HOH 43 248 46 HOH HOH A . E 4 HOH 44 249 47 HOH HOH A . E 4 HOH 45 250 48 HOH HOH A . E 4 HOH 46 251 49 HOH HOH A . E 4 HOH 47 252 50 HOH HOH A . E 4 HOH 48 253 51 HOH HOH A . E 4 HOH 49 254 52 HOH HOH A . E 4 HOH 50 255 53 HOH HOH A . E 4 HOH 51 256 54 HOH HOH A . E 4 HOH 52 257 55 HOH HOH A . E 4 HOH 53 258 56 HOH HOH A . E 4 HOH 54 259 57 HOH HOH A . E 4 HOH 55 260 58 HOH HOH A . E 4 HOH 56 261 59 HOH HOH A . E 4 HOH 57 262 60 HOH HOH A . E 4 HOH 58 263 61 HOH HOH A . E 4 HOH 59 264 62 HOH HOH A . E 4 HOH 60 265 63 HOH HOH A . E 4 HOH 61 266 64 HOH HOH A . E 4 HOH 62 267 65 HOH HOH A . E 4 HOH 63 268 66 HOH HOH A . E 4 HOH 64 269 67 HOH HOH A . E 4 HOH 65 270 68 HOH HOH A . E 4 HOH 66 271 69 HOH HOH A . E 4 HOH 67 272 70 HOH HOH A . E 4 HOH 68 273 71 HOH HOH A . E 4 HOH 69 274 72 HOH HOH A . E 4 HOH 70 275 73 HOH HOH A . E 4 HOH 71 276 74 HOH HOH A . E 4 HOH 72 277 75 HOH HOH A . E 4 HOH 73 278 76 HOH HOH A . E 4 HOH 74 279 77 HOH HOH A . E 4 HOH 75 280 78 HOH HOH A . E 4 HOH 76 281 79 HOH HOH A . E 4 HOH 77 282 80 HOH HOH A . E 4 HOH 78 283 81 HOH HOH A . E 4 HOH 79 284 82 HOH HOH A . E 4 HOH 80 285 83 HOH HOH A . E 4 HOH 81 286 84 HOH HOH A . E 4 HOH 82 287 85 HOH HOH A . E 4 HOH 83 288 86 HOH HOH A . E 4 HOH 84 289 87 HOH HOH A . E 4 HOH 85 290 88 HOH HOH A . E 4 HOH 86 291 89 HOH HOH A . E 4 HOH 87 292 90 HOH HOH A . E 4 HOH 88 293 91 HOH HOH A . E 4 HOH 89 294 92 HOH HOH A . E 4 HOH 90 295 93 HOH HOH A . E 4 HOH 91 296 94 HOH HOH A . E 4 HOH 92 297 95 HOH HOH A . E 4 HOH 93 298 96 HOH HOH A . E 4 HOH 94 299 97 HOH HOH A . E 4 HOH 95 300 98 HOH HOH A . E 4 HOH 96 301 99 HOH HOH A . E 4 HOH 97 302 100 HOH HOH A . E 4 HOH 98 303 101 HOH HOH A . E 4 HOH 99 304 102 HOH HOH A . E 4 HOH 100 305 103 HOH HOH A . E 4 HOH 101 306 104 HOH HOH A . E 4 HOH 102 307 105 HOH HOH A . E 4 HOH 103 308 106 HOH HOH A . E 4 HOH 104 309 107 HOH HOH A . E 4 HOH 105 310 108 HOH HOH A . E 4 HOH 106 311 109 HOH HOH A . E 4 HOH 107 312 110 HOH HOH A . E 4 HOH 108 313 111 HOH HOH A . E 4 HOH 109 314 112 HOH HOH A . E 4 HOH 110 315 113 HOH HOH A . E 4 HOH 111 316 114 HOH HOH A . E 4 HOH 112 317 115 HOH HOH A . E 4 HOH 113 318 116 HOH HOH A . E 4 HOH 114 319 117 HOH HOH A . E 4 HOH 115 320 118 HOH HOH A . E 4 HOH 116 321 119 HOH HOH A . E 4 HOH 117 322 120 HOH HOH A . E 4 HOH 118 323 121 HOH HOH A . E 4 HOH 119 324 122 HOH HOH A . E 4 HOH 120 325 123 HOH HOH A . E 4 HOH 121 326 124 HOH HOH A . E 4 HOH 122 327 125 HOH HOH A . E 4 HOH 123 328 126 HOH HOH A . E 4 HOH 124 329 127 HOH HOH A . E 4 HOH 125 330 128 HOH HOH A . E 4 HOH 126 331 129 HOH HOH A . E 4 HOH 127 332 130 HOH HOH A . E 4 HOH 128 333 131 HOH HOH A . E 4 HOH 129 334 132 HOH HOH A . E 4 HOH 130 335 133 HOH HOH A . E 4 HOH 131 336 134 HOH HOH A . E 4 HOH 132 337 135 HOH HOH A . E 4 HOH 133 338 136 HOH HOH A . E 4 HOH 134 339 137 HOH HOH A . E 4 HOH 135 340 138 HOH HOH A . E 4 HOH 136 341 139 HOH HOH A . E 4 HOH 137 342 140 HOH HOH A . E 4 HOH 138 343 141 HOH HOH A . E 4 HOH 139 344 142 HOH HOH A . E 4 HOH 140 345 143 HOH HOH A . E 4 HOH 141 346 144 HOH HOH A . E 4 HOH 142 347 145 HOH HOH A . E 4 HOH 143 348 146 HOH HOH A . E 4 HOH 144 349 147 HOH HOH A . E 4 HOH 145 350 148 HOH HOH A . E 4 HOH 146 351 149 HOH HOH A . E 4 HOH 147 352 150 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 60 A MSE 59 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 61 ? MET SELENOMETHIONINE 4 A MSE 78 A MSE 77 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8460 ? 1 MORE -77 ? 1 'SSA (A^2)' 15260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 58.3510000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 48.3955000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A PHE 110 ? A PHE 109 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? A THR 113 ? A THR 112 ? 1_555 72.8 ? 2 O ? A PHE 110 ? A PHE 109 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? A LEU 115 ? A LEU 114 ? 1_555 88.2 ? 3 O ? A THR 113 ? A THR 112 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? A LEU 115 ? A LEU 114 ? 1_555 96.7 ? 4 O ? A PHE 110 ? A PHE 109 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 225 ? 1_555 94.3 ? 5 O ? A THR 113 ? A THR 112 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 225 ? 1_555 85.3 ? 6 O ? A LEU 115 ? A LEU 114 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 225 ? 1_555 177.1 ? 7 O ? A PHE 110 ? A PHE 109 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 285 ? 1_555 156.5 ? 8 O ? A THR 113 ? A THR 112 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 285 ? 1_555 83.8 ? 9 O ? A LEU 115 ? A LEU 114 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 285 ? 1_555 91.7 ? 10 O ? E HOH . ? A HOH 225 ? 1_555 CA ? B CA . ? A CA 203 ? 1_555 O ? E HOH . ? A HOH 285 ? 1_555 86.5 ? 11 O ? E HOH . ? A HOH 226 ? 1_555 CA ? C CA . ? A CA 204 ? 1_555 O ? E HOH . ? A HOH 265 ? 1_555 73.8 ? 12 O ? E HOH . ? A HOH 226 ? 1_555 CA ? C CA . ? A CA 204 ? 1_555 O ? E HOH . ? A HOH 291 ? 1_555 68.8 ? 13 O ? E HOH . ? A HOH 265 ? 1_555 CA ? C CA . ? A CA 204 ? 1_555 O ? E HOH . ? A HOH 291 ? 1_555 106.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.value' 17 5 'Structure model' '_struct_conn.pdbx_dist_value' 18 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 5 'Structure model' '_struct_ref_seq_dif.details' 20 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 21 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 22 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 19.9566 16.6486 42.0219 -0.0154 -0.0120 -0.0034 -0.0037 0.0258 -0.0003 2.4376 0.1021 4.1578 0.2163 -0.9982 -0.6462 0.0024 0.0051 -0.0074 -0.0943 0.0403 0.2014 -0.0608 0.1804 -0.3269 'X-RAY DIFFRACTION' 2 ? refined 22.2599 16.5315 13.6479 -0.0674 -0.0635 -0.0374 -0.0077 -0.0023 0.0150 1.0726 0.9517 1.9868 0.1685 0.5559 0.2884 0.0153 -0.0123 -0.0030 -0.0019 -0.0887 -0.0074 0.0191 0.0304 -0.1658 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 0 ? 1 1 A A 24 . . . . ? 'X-RAY DIFFRACTION' 25 ? 2 2 A A 195 . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3FGE _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SE _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 MSE _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 226 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 64 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 65 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 65 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.31 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 10.01 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 147 ? ? -148.15 19.93 2 1 VAL A 157 ? ? -101.94 -84.38 3 1 VAL A 157 ? ? -101.94 -83.33 4 1 ASN A 164 ? ? 73.91 -2.00 5 1 ASP A 186 ? ? -153.39 15.09 6 1 LEU A 194 ? ? -97.22 -63.20 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 14 ? CG ? A ARG 15 CG 2 1 Y 1 A ARG 14 ? CD ? A ARG 15 CD 3 1 Y 1 A ARG 14 ? NE ? A ARG 15 NE 4 1 Y 1 A ARG 14 ? CZ ? A ARG 15 CZ 5 1 Y 1 A ARG 14 ? NH1 ? A ARG 15 NH1 6 1 Y 1 A ARG 14 ? NH2 ? A ARG 15 NH2 7 1 Y 1 A ARG 37 ? CZ ? A ARG 38 CZ 8 1 Y 1 A ARG 37 ? NH1 ? A ARG 38 NH1 9 1 Y 1 A ARG 37 ? NH2 ? A ARG 38 NH2 10 1 Y 1 A ARG 64 ? CG ? A ARG 65 CG 11 1 Y 1 A ARG 64 ? CD ? A ARG 65 CD 12 1 Y 1 A ARG 64 ? NE ? A ARG 65 NE 13 1 Y 1 A ARG 64 ? CZ ? A ARG 65 CZ 14 1 Y 1 A ARG 64 ? NH1 ? A ARG 65 NH1 15 1 Y 1 A ARG 64 ? NH2 ? A ARG 65 NH2 16 1 Y 1 A PRO 65 ? CG ? A PRO 66 CG 17 1 Y 1 A PRO 65 ? CD ? A PRO 66 CD 18 1 Y 1 A ARG 70 ? CG ? A ARG 71 CG 19 1 Y 1 A ARG 70 ? CD ? A ARG 71 CD 20 1 Y 1 A ARG 70 ? NE ? A ARG 71 NE 21 1 Y 1 A ARG 70 ? CZ ? A ARG 71 CZ 22 1 Y 1 A ARG 70 ? NH1 ? A ARG 71 NH1 23 1 Y 1 A ARG 70 ? NH2 ? A ARG 71 NH2 24 1 Y 1 A GLN 78 ? CG ? A GLN 79 CG 25 1 Y 1 A GLN 78 ? CD ? A GLN 79 CD 26 1 Y 1 A GLN 78 ? OE1 ? A GLN 79 OE1 27 1 Y 1 A GLN 78 ? NE2 ? A GLN 79 NE2 28 1 Y 1 A ARG 101 ? CG ? A ARG 102 CG 29 1 Y 1 A ARG 101 ? CD ? A ARG 102 CD 30 1 Y 1 A ARG 101 ? NE ? A ARG 102 NE 31 1 Y 1 A ARG 101 ? CZ ? A ARG 102 CZ 32 1 Y 1 A ARG 101 ? NH1 ? A ARG 102 NH1 33 1 Y 1 A ARG 101 ? NH2 ? A ARG 102 NH2 34 1 Y 1 A ASP 103 ? CG ? A ASP 104 CG 35 1 Y 1 A ASP 103 ? OD1 ? A ASP 104 OD1 36 1 Y 1 A ASP 103 ? OD2 ? A ASP 104 OD2 37 1 Y 1 A LYS 104 ? CG ? A LYS 105 CG 38 1 Y 1 A LYS 104 ? CD ? A LYS 105 CD 39 1 Y 1 A LYS 104 ? CE ? A LYS 105 CE 40 1 Y 1 A LYS 104 ? NZ ? A LYS 105 NZ 41 1 Y 1 A ASP 105 ? CB ? A ASP 106 CB 42 1 Y 1 A ASP 105 ? CG ? A ASP 106 CG 43 1 Y 1 A ASP 105 ? OD1 ? A ASP 106 OD1 44 1 Y 1 A ASP 105 ? OD2 ? A ASP 106 OD2 45 1 Y 1 A LYS 128 ? CE ? A LYS 129 CE 46 1 Y 1 A LYS 128 ? NZ ? A LYS 129 NZ 47 1 Y 1 A LYS 137 ? CG ? A LYS 138 CG 48 1 Y 1 A LYS 137 ? CD ? A LYS 138 CD 49 1 Y 1 A LYS 137 ? CE ? A LYS 138 CE 50 1 Y 1 A LYS 137 ? NZ ? A LYS 138 NZ 51 1 Y 1 A GLN 142 ? CG ? A GLN 143 CG 52 1 Y 1 A GLN 142 ? CD ? A GLN 143 CD 53 1 Y 1 A GLN 142 ? OE1 ? A GLN 143 OE1 54 1 Y 1 A GLN 142 ? NE2 ? A GLN 143 NE2 55 1 Y 1 A TYR 199 ? CD1 ? A TYR 200 CD1 56 1 Y 1 A TYR 199 ? CD2 ? A TYR 200 CD2 57 1 Y 1 A TYR 199 ? CE1 ? A TYR 200 CE1 58 1 Y 1 A TYR 199 ? CE2 ? A TYR 200 CE2 59 1 Y 1 A TYR 199 ? CZ ? A TYR 200 CZ 60 1 Y 1 A TYR 199 ? OH ? A TYR 200 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 66 ? A HIS 67 2 1 Y 1 A SER 67 ? A SER 68 3 1 Y 1 A VAL 68 ? A VAL 69 4 1 Y 1 A LYS 201 ? A LYS 202 5 1 Y 1 A LYS 202 ? A LYS 203 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #