HEADER GROWTH FACTOR 29-JAN-92 3FGF OBSLTE 15-JUL-93 3FGF 4FGF TITLE THREE-DIMENSIONAL STRUCTURE OF HUMAN BASIC FIBROBLAST TITLE 2 GROWTH FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE:; COMPND 3 CHAIN: NULL; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS GROWTH FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR A.E.ERIKSSON,B.W.MATTHEWS REVDAT 2 15-JUL-93 3FGF 3 OBSLTE REVDAT 1 15-JAN-92 3FGF 0 JRNL AUTH A.E.ERIKSSON,L.S.COUSENS,L.H.WEAVER,B.W.MATTHEWS JRNL TITL THREE-DIMENSIONAL STRUCTURE OF HUMAN BASIC JRNL TITL 2 FIBROBLAST GROWTH FACTOR JRNL REF PROC.NATL.ACAD.SCI.USA V. 88 3441 1991 JRNL REFN ASTM PNASA6 US ISSN 0027-8424 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NULL ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : NULL REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1002 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FGF COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 3FGF SECONDARY STRUCTURE ELEMENTS WERE DEFINED BY USE OF REMARK 5 THE 3FGF PROCEDURE OF W. KABSCH AND C. SANDER (PROGRAM * REMARK 5 DSSP*). 3FGF REMARK 6 REMARK 6 3FGF CYS 69 FORMS AN S-S LINKAGE TO A MOLECULE OF 3FGF BETA REMARK 6 -MERCAPTOETHANOL. THE DEPOSITORS ASSIGNED THE RESIDUE 3FGF REMARK 6 NAME BME TO THE BETA-MERCAPTOETHANOL. IN ORDER TO FOLLOW REMARK 6 3FGF PROTEIN DATA BANK NOMENCLATURE, THE RESIDUE IS REMARK 6 PRESENTED 3FGF AS CYS AND THE MERCAPTOETHANOL IS PRESENTED REMARK 6 AS *HET* GROUP 3FGF *SEO*. 3FGF REMARK 7 REMARK 7 3FGF CORRECTION. THIS ENTRY IS OBSOLETE. 15-JUL-93. 3FGF REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO 1 REMARK 465 ALA 2 REMARK 465 LEU 3 REMARK 465 PRO 4 REMARK 465 GLU 5 REMARK 465 ASP 6 REMARK 465 GLY 7 REMARK 465 GLY 8 REMARK 465 SER 9 REMARK 465 GLY 10 REMARK 465 ALA 11 REMARK 465 PHE 12 REMARK 465 PRO 13 REMARK 465 PRO 14 REMARK 465 GLY 15 REMARK 465 HIS 16 REMARK 465 PHE 17 REMARK 465 LYS 18 REMARK 465 ASP 19 REMARK 465 ALA 144 REMARK 465 LYS 145 REMARK 465 SER 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 SG CYS 69 SG SEO 69 2.10 REMARK 525 REMARK 525 SOLVENT REMARK 525 THE FOLLOWING SOLVENT MOLECULES LIE FARTHER THAN EXPECTED REMARK 525 FROM THE PROTEIN OR NUCLEIC ACID MOLECULE AND MAY BE REMARK 525 ASSOCIATED WITH A SYMMETRY RELATED MOLECULE (M=MODEL REMARK 525 NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH 197 DISTANCE = 5.47 ANGSTROMS SEQRES 1 146 PRO ALA LEU PRO GLU ASP GLY GLY SER GLY ALA PHE PRO SEQRES 2 146 PRO GLY HIS PHE LYS ASP PRO LYS ARG LEU TYR CYS LYS SEQRES 3 146 ASN GLY GLY PHE PHE LEU ARG ILE HIS PRO ASP GLY ARG SEQRES 4 146 VAL ASP GLY VAL ARG GLU LYS SER ASP PRO HIS ILE LYS SEQRES 5 146 LEU GLN LEU GLN ALA GLU GLU ARG GLY VAL VAL SER ILE SEQRES 6 146 LYS GLY VAL CYS ALA ASN ARG TYR LEU ALA MET LYS GLU SEQRES 7 146 ASP GLY ARG LEU LEU ALA SER LYS CYS VAL THR ASP GLU SEQRES 8 146 CYS PHE PHE PHE GLU ARG LEU GLU SER ASN ASN TYR ASN SEQRES 9 146 THR TYR ARG SER ARG LYS TYR THR SER TRP TYR VAL ALA SEQRES 10 146 LEU LYS ARG THR GLY GLN TYR LYS LEU GLY SER LYS THR SEQRES 11 146 GLY PRO GLY GLN LYS ALA ILE LEU PHE LEU PRO MET SER SEQRES 12 146 ALA LYS SER FTNOTE 1 SG SEO 69 IS BONDED TO SG CYS 69. HET SO4 147 5 HET SEO 69 4 HETNAM SO4 SULFATE ION HETNAM SEO 2-MERCAPTOETHANOL HETSYN SEO 2-SULFHYDRYL-ETHANOL FORMUL 2 SO4 O4 S 2- FORMUL 3 SEO C2 H6 O S FORMUL 4 HOH *70(H2 O1) HELIX 1 1 ASP 48 ILE 51 5 4 HELIX 2 2 THR 89 CYS 92 5 4 HELIX 3 3 LEU 126 THR 130 5 5 HELIX 4 4 GLN 134 ILE 137 5 4 SHEET 1 S1 4 ARG 39 VAL 43 0 SHEET 2 S1 4 PHE 30 HIS 35 -1 N PHE 31 O VAL 43 SHEET 3 S1 4 ARG 22 CYS 25 -1 N CYS 25 O PHE 30 SHEET 4 S1 4 LEU 138 MET 142 -1 N LEU 140 O TYR 24 SHEET 1 S2 4 GLY 80 LYS 86 0 SHEET 2 S2 4 ARG 72 GLU 78 -1 O TYR 73 N SER 85 SHEET 3 S2 4 VAL 62 VAL 68 -1 N GLY 67 O ARG 72 SHEET 4 S2 4 LYS 52 GLU 58 -1 N GLU 58 O VAL 62 SHEET 1 S3 4 GLN 123 LYS 125 0 SHEET 2 S3 4 TRP 114 LYS 119 -1 N LYS 119 O GLN 123 SHEET 3 S3 4 TYR 103 ARG 109 -1 O TYR 106 N VAL 116 SHEET 4 S3 4 PHE 93 GLU 99 -1 O PHE 93 N ARG 109 TURN 1 T1 HIS 35 GLY 38 BETA, TYPE I TURN 2 T2 GLU 45 ASP 48 BETA, TYPE I TURN 3 T3 GLU 59 VAL 62 BETA, TYPE II TURN 4 T4 LYS 77 GLY 80 BETA, TYPE I TURN 5 T5 GLU 99 ASN 102 BETA, TYPE I TURN 6 T6 TYR 111 TRP 114 BETA, TYPE I TURN 7 T7 LYS 119 GLY 122 BETA, TYPE I CRYST1 30.900 33.400 35.900 59.50 72.00 75.60 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032362 -0.008309 -0.007501 0.00000 SCALE2 0.000000 0.030911 -0.016349 0.00000 SCALE3 0.000000 0.000000 0.033133 0.00000