HEADER TRANSFERASE 10-DEC-08 3FHS OBSLTE 25-JUN-14 3FHS 4TOP TITLE GLUTATHIONE TRANSFERASE FROM GLYCINE MAX AT 2.7 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2,4-D INDUCIBLE GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLYCINE MAX; SOURCE 3 ORGANISM_COMMON: SOYBEAN; SOURCE 4 ORGANISM_TAXID: 3847; SOURCE 5 GENE: GST 4(GMGST4-4), GSTA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE-70 KEYWDS INDUCED-FIT MECHANISM, TAU CLASS GST, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.AXARLI,D.PRATHUSHA,A.C.PAPAGEORGIOU,N.E.LABROU REVDAT 4 25-JUN-14 3FHS 1 OBSLTE REVDAT 3 13-JUL-11 3FHS 1 VERSN REVDAT 2 25-AUG-09 3FHS 1 JRNL REVDAT 1 07-JUL-09 3FHS 0 JRNL AUTH I.AXARLI,P.DHAVALA,A.C.PAPAGEORGIOU,N.E.LABROU JRNL TITL CRYSTAL STRUCTURE OF GLYCINE MAX GLUTATHIONE TRANSFERASE IN JRNL TITL 2 COMPLEX WITH GLUTATHIONE: INVESTIGATION OF THE MECHANISM JRNL TITL 3 OPERATING BY THE TAU CLASS GLUTATHIONE TRANSFERASES JRNL REF BIOCHEM.J. V. 422 247 2009 JRNL REFN ISSN 0264-6021 JRNL PMID 19538182 JRNL DOI 10.1042/BJ20090224 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 24684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1320 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1837 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3593 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 100 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.326 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.260 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.179 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.349 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3750 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5068 ; 1.883 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 441 ;10.328 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;38.825 ;24.719 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 695 ;21.499 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.814 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 533 ; 0.172 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2836 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1917 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2567 ; 0.324 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 158 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.225 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.233 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2236 ; 0.726 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3543 ; 1.329 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1742 ; 1.905 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1521 ; 3.099 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 210 5 REMARK 3 1 B 3 B 210 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 824 ; 0.13 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 879 ; 0.45 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 824 ; 0.43 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 879 ; 0.95 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 219 REMARK 3 RESIDUE RANGE : B 1 B 219 REMARK 3 ORIGIN FOR THE GROUP (A): -59.0802 0.0739 -1.1762 REMARK 3 T TENSOR REMARK 3 T11: -0.0317 T22: -0.2591 REMARK 3 T33: -0.1740 T12: 0.0006 REMARK 3 T13: -0.0061 T23: 0.0968 REMARK 3 L TENSOR REMARK 3 L11: 1.3780 L22: 2.1508 REMARK 3 L33: 2.9451 L12: -0.0777 REMARK 3 L13: -0.0628 L23: 0.8482 REMARK 3 S TENSOR REMARK 3 S11: -0.0082 S12: -0.0148 S13: 0.0028 REMARK 3 S21: -0.0029 S22: 0.0718 S23: -0.1387 REMARK 3 S31: -0.0062 S32: 0.2918 S33: -0.0635 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FHS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-DEC-08. REMARK 100 THE RCSB ID CODE IS RCSB050607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8088 REMARK 200 MONOCHROMATOR : FIXED-EXIT SAGITAL FOCUSING REMARK 200 DOUBLE SILICON (111) CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : FLAT SIC MIRROR, RH-COATED MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26170 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.56300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VO4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRI-SODIUM CITRATE 1.2-1.3M IN HEPES REMARK 280 BUFFER 0.1M, PH7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.23233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.46467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.34850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 75.58083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 15.11617 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ASP A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 117 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 46 O HOH B 237 2.13 REMARK 500 O HOH B 225 O HOH B 248 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 20 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 20 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLN B 46 N - CA - CB ANGL. DEV. = 11.3 DEGREES REMARK 500 GLU B 130 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 66 112.55 76.69 REMARK 500 TRP A 78 58.14 -95.56 REMARK 500 ASN A 82 72.23 47.45 REMARK 500 LYS A 117 -75.52 -102.14 REMARK 500 LEU A 139 -71.99 114.48 REMARK 500 ASP A 141 89.81 2.82 REMARK 500 LYS A 215 50.02 -59.54 REMARK 500 LEU A 216 -41.18 170.51 REMARK 500 ILE A 218 113.21 -33.65 REMARK 500 LEU B 45 0.32 -60.19 REMARK 500 GLN B 46 -68.35 -160.23 REMARK 500 MET B 47 -82.32 22.71 REMARK 500 GLU B 66 113.20 74.79 REMARK 500 TRP B 78 55.86 -96.68 REMARK 500 ALA B 131 -100.10 54.52 REMARK 500 THR B 143 -53.15 86.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 116 LYS A 117 -144.15 REMARK 500 ASP A 141 LYS A 142 120.88 REMARK 500 LEU B 45 GLN B 46 -110.53 REMARK 500 GLN B 46 MET B 47 85.52 REMARK 500 GLU B 130 ALA B 131 67.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 VAL A 50 23.4 L L OUTSIDE RANGE REMARK 500 ASP A 141 20.9 L L OUTSIDE RANGE REMARK 500 THR A 143 25.0 L L OUTSIDE RANGE REMARK 500 VAL A 195 22.6 L L OUTSIDE RANGE REMARK 500 ILE A 218 24.5 L L OUTSIDE RANGE REMARK 500 LEU B 45 20.9 L L OUTSIDE RANGE REMARK 500 GLN B 46 22.5 L L OUTSIDE RANGE REMARK 500 MET B 47 9.8 L L EXPECTING SP3 REMARK 500 VAL B 50 23.8 L L OUTSIDE RANGE REMARK 500 GLU B 130 17.6 L L OUTSIDE RANGE REMARK 500 THR B 143 21.6 L L OUTSIDE RANGE REMARK 500 VAL B 153 23.1 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A3587 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B3587 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VO4 RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC AND FUNCTIONAL CHARACTERIZATION OF THE REMARK 900 FLUORODIFEN-INDUCIBLE GLUTATHIONE TRANSFERASE FROM GLYCINE REMARK 900 MAX REVEALS AN ACTIVE SITE TOPOGRAPHY SUITED FOR REMARK 900 DIPHENYLETHER HERBICIDES AND A NOVEL L-SITE DBREF 3FHS A 1 219 UNP O49235 O49235_SOYBN 1 219 DBREF 3FHS B 1 219 UNP O49235 O49235_SOYBN 1 219 SEQADV 3FHS GLN A 2 UNP O49235 SER 2 CONFLICT SEQADV 3FHS GLN B 2 UNP O49235 SER 2 CONFLICT SEQRES 1 A 219 MET GLN ASP GLU VAL VAL LEU LEU ASP PHE TRP PRO SER SEQRES 2 A 219 PRO PHE GLY MET ARG VAL ARG ILE ALA LEU ALA GLU LYS SEQRES 3 A 219 GLY ILE LYS TYR GLU TYR LYS GLU GLU ASP LEU ARG ASN SEQRES 4 A 219 LYS SER PRO LEU LEU LEU GLN MET ASN PRO VAL HIS LYS SEQRES 5 A 219 LYS ILE PRO VAL LEU ILE HIS ASN GLY LYS PRO ILE CYS SEQRES 6 A 219 GLU SER LEU ILE ALA VAL GLN TYR ILE GLU GLU VAL TRP SEQRES 7 A 219 ASN ASP ARG ASN PRO LEU LEU PRO SER ASP PRO TYR GLN SEQRES 8 A 219 ARG ALA GLN THR ARG PHE TRP ALA ASP TYR VAL ASP LYS SEQRES 9 A 219 LYS ILE TYR ASP LEU GLY ARG LYS ILE TRP THR SER LYS SEQRES 10 A 219 GLY GLU GLU LYS GLU ALA ALA LYS LYS GLU PHE ILE GLU SEQRES 11 A 219 ALA LEU LYS LEU LEU GLU GLU GLN LEU GLY ASP LYS THR SEQRES 12 A 219 TYR PHE GLY GLY ASP ASN LEU GLY PHE VAL ASP ILE ALA SEQRES 13 A 219 LEU VAL PRO PHE TYR THR TRP PHE LYS ALA TYR GLU THR SEQRES 14 A 219 PHE GLY THR LEU ASN ILE GLU SER GLU CYS PRO LYS PHE SEQRES 15 A 219 ILE ALA TRP ALA LYS ARG CYS LEU GLN LYS GLU SER VAL SEQRES 16 A 219 ALA LYS SER LEU PRO ASP GLN GLN LYS VAL TYR GLU PHE SEQRES 17 A 219 ILE MET ASP LEU ARG LYS LYS LEU GLY ILE GLU SEQRES 1 B 219 MET GLN ASP GLU VAL VAL LEU LEU ASP PHE TRP PRO SER SEQRES 2 B 219 PRO PHE GLY MET ARG VAL ARG ILE ALA LEU ALA GLU LYS SEQRES 3 B 219 GLY ILE LYS TYR GLU TYR LYS GLU GLU ASP LEU ARG ASN SEQRES 4 B 219 LYS SER PRO LEU LEU LEU GLN MET ASN PRO VAL HIS LYS SEQRES 5 B 219 LYS ILE PRO VAL LEU ILE HIS ASN GLY LYS PRO ILE CYS SEQRES 6 B 219 GLU SER LEU ILE ALA VAL GLN TYR ILE GLU GLU VAL TRP SEQRES 7 B 219 ASN ASP ARG ASN PRO LEU LEU PRO SER ASP PRO TYR GLN SEQRES 8 B 219 ARG ALA GLN THR ARG PHE TRP ALA ASP TYR VAL ASP LYS SEQRES 9 B 219 LYS ILE TYR ASP LEU GLY ARG LYS ILE TRP THR SER LYS SEQRES 10 B 219 GLY GLU GLU LYS GLU ALA ALA LYS LYS GLU PHE ILE GLU SEQRES 11 B 219 ALA LEU LYS LEU LEU GLU GLU GLN LEU GLY ASP LYS THR SEQRES 12 B 219 TYR PHE GLY GLY ASP ASN LEU GLY PHE VAL ASP ILE ALA SEQRES 13 B 219 LEU VAL PRO PHE TYR THR TRP PHE LYS ALA TYR GLU THR SEQRES 14 B 219 PHE GLY THR LEU ASN ILE GLU SER GLU CYS PRO LYS PHE SEQRES 15 B 219 ILE ALA TRP ALA LYS ARG CYS LEU GLN LYS GLU SER VAL SEQRES 16 B 219 ALA LYS SER LEU PRO ASP GLN GLN LYS VAL TYR GLU PHE SEQRES 17 B 219 ILE MET ASP LEU ARG LYS LYS LEU GLY ILE GLU HET GSH A3587 20 HET GSH B3587 20 HETNAM GSH GLUTATHIONE FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 5 HOH *100(H2 O) HELIX 1 1 SER A 13 LYS A 26 1 14 HELIX 2 2 SER A 41 ASN A 48 1 8 HELIX 3 3 GLU A 66 TRP A 78 1 13 HELIX 4 4 ASP A 88 SER A 116 1 29 HELIX 5 5 GLY A 118 GLN A 138 1 21 HELIX 6 6 GLY A 151 VAL A 158 1 8 HELIX 7 7 PRO A 159 THR A 162 5 4 HELIX 8 8 TRP A 163 THR A 172 1 10 HELIX 9 9 ASN A 174 CYS A 179 1 6 HELIX 10 10 CYS A 179 LEU A 190 1 12 HELIX 11 11 LYS A 192 LYS A 197 1 6 HELIX 12 12 ASP A 201 ARG A 213 1 13 HELIX 13 13 SER B 13 GLY B 27 1 15 HELIX 14 14 LEU B 43 ASN B 48 1 6 HELIX 15 15 GLU B 66 TRP B 78 1 13 HELIX 16 16 ASP B 88 SER B 116 1 29 HELIX 17 17 LYS B 117 GLY B 140 1 24 HELIX 18 18 GLY B 151 VAL B 158 1 8 HELIX 19 19 PRO B 159 THR B 162 5 4 HELIX 20 20 TRP B 163 THR B 172 1 10 HELIX 21 21 ASN B 174 CYS B 179 1 6 HELIX 22 22 CYS B 179 LEU B 190 1 12 HELIX 23 23 LYS B 192 LYS B 197 1 6 HELIX 24 24 ASP B 201 GLY B 217 1 17 SHEET 1 A 4 GLU A 31 GLU A 34 0 SHEET 2 A 4 VAL A 5 ASP A 9 1 N LEU A 7 O GLU A 31 SHEET 3 A 4 VAL A 56 HIS A 59 -1 O ILE A 58 N VAL A 6 SHEET 4 A 4 LYS A 62 CYS A 65 -1 O ILE A 64 N LEU A 57 SHEET 1 B 4 GLU B 31 GLU B 34 0 SHEET 2 B 4 VAL B 5 ASP B 9 1 N LEU B 7 O GLU B 31 SHEET 3 B 4 VAL B 56 HIS B 59 -1 O ILE B 58 N VAL B 6 SHEET 4 B 4 LYS B 62 CYS B 65 -1 O LYS B 62 N HIS B 59 CISPEP 1 ILE A 54 PRO A 55 0 -0.76 CISPEP 2 GLY A 140 ASP A 141 0 -1.98 CISPEP 3 GLY A 217 ILE A 218 0 14.62 CISPEP 4 ILE A 218 GLU A 219 0 1.44 CISPEP 5 ILE B 54 PRO B 55 0 -0.25 CISPEP 6 GLY B 140 ASP B 141 0 7.18 CISPEP 7 GLY B 217 ILE B 218 0 -8.80 SITE 1 AC1 13 SER A 13 PHE A 15 LEU A 37 LYS A 53 SITE 2 AC1 13 ILE A 54 PRO A 55 GLU A 66 SER A 67 SITE 3 AC1 13 TYR A 107 HOH A 231 HOH A 237 HOH A 262 SITE 4 AC1 13 HOH A 270 SITE 1 AC2 12 PHE B 10 SER B 13 PHE B 15 LYS B 53 SITE 2 AC2 12 ILE B 54 PRO B 55 GLU B 66 SER B 67 SITE 3 AC2 12 TYR B 107 HOH B 232 HOH B 250 HOH B 266 CRYST1 136.211 136.211 90.697 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007342 0.004239 0.000000 0.00000 SCALE2 0.000000 0.008477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011026 0.00000