data_3FJ2 # _entry.id 3FJ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FJ2 pdb_00003fj2 10.2210/pdb3fj2/pdb RCSB RCSB050649 ? ? WWPDB D_1000050649 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 390900 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3FJ2 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-12-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Monooxygenase-like Protein (NP_471648.1) from LISTERIA INNOCUA at 1.85 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3FJ2 _cell.length_a 72.944 _cell.length_b 72.944 _cell.length_c 213.691 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FJ2 _symmetry.Int_Tables_number 178 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Monooxygenase-like Protein' 22251.143 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 3 water nat water 18.015 183 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)KKVFITTGTEHYLRQL(MSE)ENYIGENVTLLQNFSQSLLYQESTGEKLFQE GKEYRVLQSSGSLKGFGIVVFEYIQLRDEEIPIFLQ(MSE)YQHASLHFSETPGLQSTKLTKA(MSE)NTNQFLIVSFWD SEVFFQEWKKTPLHKEITSI(MSE)KKNNTQVGFSHEDIYHYPEFSHDAK ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMKKVFITTGTEHYLRQLMENYIGENVTLLQNFSQSLLYQESTGEKLFQEGKEYRVLQSSGS LKGFGIVVFEYIQLRDEEIPIFLQMYQHASLHFSETPGLQSTKLTKAMNTNQFLIVSFWDSEVFFQEWKKTPLHKEITSI MKKNNTQVGFSHEDIYHYPEFSHDAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 390900 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 LYS n 1 22 LYS n 1 23 VAL n 1 24 PHE n 1 25 ILE n 1 26 THR n 1 27 THR n 1 28 GLY n 1 29 THR n 1 30 GLU n 1 31 HIS n 1 32 TYR n 1 33 LEU n 1 34 ARG n 1 35 GLN n 1 36 LEU n 1 37 MSE n 1 38 GLU n 1 39 ASN n 1 40 TYR n 1 41 ILE n 1 42 GLY n 1 43 GLU n 1 44 ASN n 1 45 VAL n 1 46 THR n 1 47 LEU n 1 48 LEU n 1 49 GLN n 1 50 ASN n 1 51 PHE n 1 52 SER n 1 53 GLN n 1 54 SER n 1 55 LEU n 1 56 LEU n 1 57 TYR n 1 58 GLN n 1 59 GLU n 1 60 SER n 1 61 THR n 1 62 GLY n 1 63 GLU n 1 64 LYS n 1 65 LEU n 1 66 PHE n 1 67 GLN n 1 68 GLU n 1 69 GLY n 1 70 LYS n 1 71 GLU n 1 72 TYR n 1 73 ARG n 1 74 VAL n 1 75 LEU n 1 76 GLN n 1 77 SER n 1 78 SER n 1 79 GLY n 1 80 SER n 1 81 LEU n 1 82 LYS n 1 83 GLY n 1 84 PHE n 1 85 GLY n 1 86 ILE n 1 87 VAL n 1 88 VAL n 1 89 PHE n 1 90 GLU n 1 91 TYR n 1 92 ILE n 1 93 GLN n 1 94 LEU n 1 95 ARG n 1 96 ASP n 1 97 GLU n 1 98 GLU n 1 99 ILE n 1 100 PRO n 1 101 ILE n 1 102 PHE n 1 103 LEU n 1 104 GLN n 1 105 MSE n 1 106 TYR n 1 107 GLN n 1 108 HIS n 1 109 ALA n 1 110 SER n 1 111 LEU n 1 112 HIS n 1 113 PHE n 1 114 SER n 1 115 GLU n 1 116 THR n 1 117 PRO n 1 118 GLY n 1 119 LEU n 1 120 GLN n 1 121 SER n 1 122 THR n 1 123 LYS n 1 124 LEU n 1 125 THR n 1 126 LYS n 1 127 ALA n 1 128 MSE n 1 129 ASN n 1 130 THR n 1 131 ASN n 1 132 GLN n 1 133 PHE n 1 134 LEU n 1 135 ILE n 1 136 VAL n 1 137 SER n 1 138 PHE n 1 139 TRP n 1 140 ASP n 1 141 SER n 1 142 GLU n 1 143 VAL n 1 144 PHE n 1 145 PHE n 1 146 GLN n 1 147 GLU n 1 148 TRP n 1 149 LYS n 1 150 LYS n 1 151 THR n 1 152 PRO n 1 153 LEU n 1 154 HIS n 1 155 LYS n 1 156 GLU n 1 157 ILE n 1 158 THR n 1 159 SER n 1 160 ILE n 1 161 MSE n 1 162 LYS n 1 163 LYS n 1 164 ASN n 1 165 ASN n 1 166 THR n 1 167 GLN n 1 168 VAL n 1 169 GLY n 1 170 PHE n 1 171 SER n 1 172 HIS n 1 173 GLU n 1 174 ASP n 1 175 ILE n 1 176 TYR n 1 177 HIS n 1 178 TYR n 1 179 PRO n 1 180 GLU n 1 181 PHE n 1 182 SER n 1 183 HIS n 1 184 ASP n 1 185 ALA n 1 186 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'lin2316, NP_471648.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Listeria innocua' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1642 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q929G0_LISIN _struct_ref.pdbx_db_accession Q929G0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKKVFITTGTEHYLRQLMENYIGENVTLLQNFSQSLLYQESTGEKLFQEGKEYRVLQSSGSLKGFGIVVFEYIQLRDEEI PIFLQMYQHASLHFSETPGLQSTKLTKAMNTNQFLIVSFWDSEVFFQEWKKTPLHKEITSIMKKNNTQVGFSHEDIYHYP EFSHDAK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FJ2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 186 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q929G0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 167 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 167 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FJ2 MSE A 1 ? UNP Q929G0 ? ? 'expression tag' -18 1 1 3FJ2 GLY A 2 ? UNP Q929G0 ? ? 'expression tag' -17 2 1 3FJ2 SER A 3 ? UNP Q929G0 ? ? 'expression tag' -16 3 1 3FJ2 ASP A 4 ? UNP Q929G0 ? ? 'expression tag' -15 4 1 3FJ2 LYS A 5 ? UNP Q929G0 ? ? 'expression tag' -14 5 1 3FJ2 ILE A 6 ? UNP Q929G0 ? ? 'expression tag' -13 6 1 3FJ2 HIS A 7 ? UNP Q929G0 ? ? 'expression tag' -12 7 1 3FJ2 HIS A 8 ? UNP Q929G0 ? ? 'expression tag' -11 8 1 3FJ2 HIS A 9 ? UNP Q929G0 ? ? 'expression tag' -10 9 1 3FJ2 HIS A 10 ? UNP Q929G0 ? ? 'expression tag' -9 10 1 3FJ2 HIS A 11 ? UNP Q929G0 ? ? 'expression tag' -8 11 1 3FJ2 HIS A 12 ? UNP Q929G0 ? ? 'expression tag' -7 12 1 3FJ2 GLU A 13 ? UNP Q929G0 ? ? 'expression tag' -6 13 1 3FJ2 ASN A 14 ? UNP Q929G0 ? ? 'expression tag' -5 14 1 3FJ2 LEU A 15 ? UNP Q929G0 ? ? 'expression tag' -4 15 1 3FJ2 TYR A 16 ? UNP Q929G0 ? ? 'expression tag' -3 16 1 3FJ2 PHE A 17 ? UNP Q929G0 ? ? 'expression tag' -2 17 1 3FJ2 GLN A 18 ? UNP Q929G0 ? ? 'expression tag' -1 18 1 3FJ2 GLY A 19 ? UNP Q929G0 ? ? 'expression tag' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3FJ2 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.69 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 66.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.0000M NH4H2PO3, 0.1M Citrate pH 5.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.details 'Adjustable focusing mirrors in K-B geometry' _diffrn_detector.pdbx_collection_date 2008-10-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) Double Crystal Monochrometer' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.94645 1.0 2 0.97967 1.0 3 0.97953 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_wavelength_list 0.94645,0.97967,0.97953 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 3FJ2 _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 28.880 _reflns.number_obs 29746 _reflns.pdbx_Rmerge_I_obs 0.161 _reflns.pdbx_netI_over_sigmaI 2.986 _reflns.pdbx_Rsym_value 0.161 _reflns.pdbx_redundancy 14.000 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 20.997 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.85 1.90 ? 30636 ? 0.947 0.8 0.947 ? 14.40 ? 2124 99.80 1 1 1.90 1.95 ? 29950 ? 0.785 0.8 0.785 ? 14.40 ? 2086 99.80 2 1 1.95 2.01 ? 29208 ? 0.623 1.2 0.623 ? 14.40 ? 2032 99.90 3 1 2.01 2.07 ? 28423 ? 0.508 1.3 0.508 ? 14.40 ? 1977 99.90 4 1 2.07 2.14 ? 27613 ? 0.444 1.5 0.444 ? 14.40 ? 1922 99.90 5 1 2.14 2.21 ? 26872 ? 0.360 2.1 0.360 ? 14.40 ? 1869 100.00 6 1 2.21 2.29 ? 25558 ? 0.326 1.0 0.326 ? 14.20 ? 1797 100.00 7 1 2.29 2.39 ? 24794 ? 0.284 2.6 0.284 ? 14.30 ? 1730 100.00 8 1 2.39 2.49 ? 23792 ? 0.241 3.0 0.241 ? 14.20 ? 1670 100.00 9 1 2.49 2.62 ? 22897 ? 0.211 3.4 0.211 ? 14.20 ? 1612 100.00 10 1 2.62 2.76 ? 21825 ? 0.173 3.8 0.173 ? 14.10 ? 1545 100.00 11 1 2.76 2.93 ? 20443 ? 0.152 4.4 0.152 ? 14.00 ? 1456 100.00 12 1 2.93 3.13 ? 18948 ? 0.133 4.8 0.133 ? 13.90 ? 1368 100.00 13 1 3.13 3.38 ? 17668 ? 0.124 5.0 0.124 ? 13.50 ? 1304 100.00 14 1 3.38 3.70 ? 16089 ? 0.105 5.5 0.105 ? 13.40 ? 1201 100.00 15 1 3.70 4.14 ? 14547 ? 0.097 5.8 0.097 ? 13.30 ? 1097 100.00 16 1 4.14 4.78 ? 12919 ? 0.090 6.2 0.090 ? 13.10 ? 989 100.00 17 1 4.78 5.85 ? 10828 ? 0.099 5.5 0.099 ? 12.80 ? 847 100.00 18 1 5.85 8.27 ? 8565 ? 0.105 3.9 0.105 ? 12.30 ? 695 100.00 19 1 8.27 28.88 ? 4465 ? 0.089 5.3 0.089 ? 10.50 ? 425 97.60 20 1 # _refine.entry_id 3FJ2 _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 28.880 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.840 _refine.ls_number_reflns_obs 29683 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. GLYCEROL (GOL) MOLECULES FROM CRYO SOLUTION ARE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.168 _refine.ls_R_factor_R_work 0.167 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.186 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1504 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.306 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.240 _refine.aniso_B[2][2] 0.240 _refine.aniso_B[3][3] -0.350 _refine.aniso_B[1][2] 0.120 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.090 _refine.pdbx_overall_ESU_R_Free 0.087 _refine.overall_SU_ML 0.058 _refine.overall_SU_B 3.760 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 78.66 _refine.B_iso_min 14.13 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1398 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 183 _refine_hist.number_atoms_total 1605 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 28.880 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1605 0.017 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1098 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2175 1.401 1.946 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 2689 0.819 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 198 6.162 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 80 34.360 25.125 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 287 13.009 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 4 13.276 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 225 0.083 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1817 0.006 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 337 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 305 0.213 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1078 0.184 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 771 0.186 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 779 0.086 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 149 0.155 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 13 0.247 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 51 0.236 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 11 0.135 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1029 2.254 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 379 0.476 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1537 3.039 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 732 2.452 3.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 638 3.406 5.000 ? ? # _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.898 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.530 _refine_ls_shell.number_reflns_R_work 2024 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.200 _refine_ls_shell.R_factor_R_free 0.261 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2125 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FJ2 _struct.title 'CRYSTAL STRUCTURE OF A MONOOXYGENASE-LIKE PROTEIN (LIN2316) FROM LISTERIA INNOCUA AT 1.85 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;MONOOXYGENASE-LIKE PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, Unknown Function ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3FJ2 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? GLY A 19 ? ASN A -5 GLY A 0 1 ? 6 HELX_P HELX_P2 2 THR A 29 ? TYR A 40 ? THR A 10 TYR A 21 1 ? 12 HELX_P HELX_P3 3 ARG A 95 ? GLU A 97 ? ARG A 76 GLU A 78 5 ? 3 HELX_P HELX_P4 4 GLU A 98 ? LEU A 111 ? GLU A 79 LEU A 92 1 ? 14 HELX_P HELX_P5 5 HIS A 112 ? THR A 116 ? HIS A 93 THR A 97 5 ? 5 HELX_P HELX_P6 6 SER A 141 ? LYS A 149 ? SER A 122 LYS A 130 1 ? 9 HELX_P HELX_P7 7 THR A 151 ? ASN A 164 ? THR A 132 ASN A 145 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 19 C ? ? ? 1_555 A MSE 20 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 20 C ? ? ? 1_555 A LYS 21 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale3 covale both ? A LEU 36 C ? ? ? 1_555 A MSE 37 N A ? A LEU 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A LEU 36 C ? ? ? 1_555 A MSE 37 N B ? A LEU 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A MSE 37 C A ? ? 1_555 A GLU 38 N ? ? A MSE 18 A GLU 19 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A MSE 37 C B ? ? 1_555 A GLU 38 N ? ? A MSE 18 A GLU 19 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale7 covale both ? A GLN 104 C ? ? ? 1_555 A MSE 105 N ? ? A GLN 85 A MSE 86 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? A MSE 105 C ? ? ? 1_555 A TYR 106 N ? ? A MSE 86 A TYR 87 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? A ALA 127 C ? ? ? 1_555 A MSE 128 N ? ? A ALA 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale10 covale both ? A MSE 128 C ? ? ? 1_555 A ASN 129 N ? ? A MSE 109 A ASN 110 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? A ILE 160 C ? ? ? 1_555 A MSE 161 N ? ? A ILE 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale12 covale both ? A MSE 161 C ? ? ? 1_555 A LYS 162 N ? ? A MSE 142 A LYS 143 1_555 ? ? ? ? ? ? ? 1.322 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 21 ? GLY A 28 ? LYS A 2 GLY A 9 A 2 SER A 54 ? THR A 61 ? SER A 35 THR A 42 A 3 VAL A 45 ? GLN A 49 ? VAL A 26 GLN A 30 A 4 HIS A 172 ? HIS A 177 ? HIS A 153 HIS A 158 A 5 ILE A 86 ? GLN A 93 ? ILE A 67 GLN A 74 A 6 GLN A 132 ? TRP A 139 ? GLN A 113 TRP A 120 A 7 LEU A 119 ? ALA A 127 ? LEU A 100 ALA A 108 A 8 LYS A 70 ? GLY A 79 ? LYS A 51 GLY A 60 A 9 LYS A 21 ? GLY A 28 ? LYS A 2 GLY A 9 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 22 ? N LYS A 3 O SER A 60 ? O SER A 41 A 2 3 O TYR A 57 ? O TYR A 38 N THR A 46 ? N THR A 27 A 3 4 N GLN A 49 ? N GLN A 30 O HIS A 177 ? O HIS A 158 A 4 5 O HIS A 172 ? O HIS A 153 N TYR A 91 ? N TYR A 72 A 5 6 N ILE A 92 ? N ILE A 73 O PHE A 133 ? O PHE A 114 A 6 7 O GLN A 132 ? O GLN A 113 N ALA A 127 ? N ALA A 108 A 7 8 O LEU A 124 ? O LEU A 105 N LEU A 75 ? N LEU A 56 A 8 9 O VAL A 74 ? O VAL A 55 N LYS A 21 ? N LYS A 2 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 168 ? 2 'BINDING SITE FOR RESIDUE GOL A 168' AC2 Software A GOL 169 ? 5 'BINDING SITE FOR RESIDUE GOL A 169' AC3 Software A GOL 170 ? 5 'BINDING SITE FOR RESIDUE GOL A 170' AC4 Software A GOL 171 ? 4 'BINDING SITE FOR RESIDUE GOL A 171' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 VAL A 74 ? VAL A 55 . ? 1_555 ? 2 AC1 2 HOH F . ? HOH A 353 . ? 1_555 ? 3 AC2 5 ASN A 14 ? ASN A -5 . ? 1_555 ? 4 AC2 5 TYR A 16 ? TYR A -3 . ? 1_555 ? 5 AC2 5 PRO A 100 ? PRO A 81 . ? 1_555 ? 6 AC2 5 LEU A 103 ? LEU A 84 . ? 1_555 ? 7 AC2 5 HOH F . ? HOH A 291 . ? 1_555 ? 8 AC3 5 LYS A 82 ? LYS A 63 . ? 1_555 ? 9 AC3 5 GLY A 118 ? GLY A 99 . ? 1_555 ? 10 AC3 5 LEU A 119 ? LEU A 100 . ? 1_555 ? 11 AC3 5 GLN A 120 ? GLN A 101 . ? 1_555 ? 12 AC3 5 ASP A 140 ? ASP A 121 . ? 1_555 ? 13 AC4 4 LEU A 94 ? LEU A 75 . ? 1_555 ? 14 AC4 4 ASN A 131 ? ASN A 112 . ? 1_555 ? 15 AC4 4 ASN A 164 ? ASN A 145 . ? 1_555 ? 16 AC4 4 THR A 166 ? THR A 147 . ? 1_555 ? # _atom_sites.entry_id 3FJ2 _atom_sites.fract_transf_matrix[1][1] 0.013709 _atom_sites.fract_transf_matrix[1][2] 0.007915 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015830 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004680 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 HIS 11 -8 ? ? ? A . n A 1 12 HIS 12 -7 ? ? ? A . n A 1 13 GLU 13 -6 -6 GLU GLU A . n A 1 14 ASN 14 -5 -5 ASN ASN A . n A 1 15 LEU 15 -4 -4 LEU LEU A . n A 1 16 TYR 16 -3 -3 TYR TYR A . n A 1 17 PHE 17 -2 -2 PHE PHE A . n A 1 18 GLN 18 -1 -1 GLN GLN A . n A 1 19 GLY 19 0 0 GLY GLY A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 LYS 21 2 2 LYS LYS A . n A 1 22 LYS 22 3 3 LYS LYS A . n A 1 23 VAL 23 4 4 VAL VAL A . n A 1 24 PHE 24 5 5 PHE PHE A . n A 1 25 ILE 25 6 6 ILE ILE A . n A 1 26 THR 26 7 7 THR THR A . n A 1 27 THR 27 8 8 THR THR A . n A 1 28 GLY 28 9 9 GLY GLY A . n A 1 29 THR 29 10 10 THR THR A . n A 1 30 GLU 30 11 11 GLU GLU A . n A 1 31 HIS 31 12 12 HIS HIS A . n A 1 32 TYR 32 13 13 TYR TYR A . n A 1 33 LEU 33 14 14 LEU LEU A . n A 1 34 ARG 34 15 15 ARG ARG A . n A 1 35 GLN 35 16 16 GLN GLN A . n A 1 36 LEU 36 17 17 LEU LEU A . n A 1 37 MSE 37 18 18 MSE MSE A . n A 1 38 GLU 38 19 19 GLU GLU A . n A 1 39 ASN 39 20 20 ASN ASN A . n A 1 40 TYR 40 21 21 TYR TYR A . n A 1 41 ILE 41 22 22 ILE ILE A . n A 1 42 GLY 42 23 23 GLY GLY A . n A 1 43 GLU 43 24 24 GLU GLU A . n A 1 44 ASN 44 25 25 ASN ASN A . n A 1 45 VAL 45 26 26 VAL VAL A . n A 1 46 THR 46 27 27 THR THR A . n A 1 47 LEU 47 28 28 LEU LEU A . n A 1 48 LEU 48 29 29 LEU LEU A . n A 1 49 GLN 49 30 30 GLN GLN A . n A 1 50 ASN 50 31 31 ASN ASN A . n A 1 51 PHE 51 32 32 PHE PHE A . n A 1 52 SER 52 33 33 SER SER A . n A 1 53 GLN 53 34 34 GLN GLN A . n A 1 54 SER 54 35 35 SER SER A . n A 1 55 LEU 55 36 36 LEU LEU A . n A 1 56 LEU 56 37 37 LEU LEU A . n A 1 57 TYR 57 38 38 TYR TYR A . n A 1 58 GLN 58 39 39 GLN GLN A . n A 1 59 GLU 59 40 40 GLU GLU A . n A 1 60 SER 60 41 41 SER SER A . n A 1 61 THR 61 42 42 THR THR A . n A 1 62 GLY 62 43 43 GLY GLY A . n A 1 63 GLU 63 44 44 GLU GLU A . n A 1 64 LYS 64 45 45 LYS LYS A . n A 1 65 LEU 65 46 46 LEU LEU A . n A 1 66 PHE 66 47 47 PHE PHE A . n A 1 67 GLN 67 48 48 GLN GLN A . n A 1 68 GLU 68 49 49 GLU GLU A . n A 1 69 GLY 69 50 50 GLY GLY A . n A 1 70 LYS 70 51 51 LYS LYS A . n A 1 71 GLU 71 52 52 GLU GLU A . n A 1 72 TYR 72 53 53 TYR TYR A . n A 1 73 ARG 73 54 54 ARG ARG A . n A 1 74 VAL 74 55 55 VAL VAL A . n A 1 75 LEU 75 56 56 LEU LEU A . n A 1 76 GLN 76 57 57 GLN GLN A . n A 1 77 SER 77 58 58 SER SER A . n A 1 78 SER 78 59 59 SER SER A . n A 1 79 GLY 79 60 60 GLY GLY A . n A 1 80 SER 80 61 61 SER SER A . n A 1 81 LEU 81 62 62 LEU LEU A . n A 1 82 LYS 82 63 63 LYS LYS A . n A 1 83 GLY 83 64 64 GLY GLY A . n A 1 84 PHE 84 65 65 PHE PHE A . n A 1 85 GLY 85 66 66 GLY GLY A . n A 1 86 ILE 86 67 67 ILE ILE A . n A 1 87 VAL 87 68 68 VAL VAL A . n A 1 88 VAL 88 69 69 VAL VAL A . n A 1 89 PHE 89 70 70 PHE PHE A . n A 1 90 GLU 90 71 71 GLU GLU A . n A 1 91 TYR 91 72 72 TYR TYR A . n A 1 92 ILE 92 73 73 ILE ILE A . n A 1 93 GLN 93 74 74 GLN GLN A . n A 1 94 LEU 94 75 75 LEU LEU A . n A 1 95 ARG 95 76 76 ARG ARG A . n A 1 96 ASP 96 77 77 ASP ASP A . n A 1 97 GLU 97 78 78 GLU GLU A . n A 1 98 GLU 98 79 79 GLU GLU A . n A 1 99 ILE 99 80 80 ILE ILE A . n A 1 100 PRO 100 81 81 PRO PRO A . n A 1 101 ILE 101 82 82 ILE ILE A . n A 1 102 PHE 102 83 83 PHE PHE A . n A 1 103 LEU 103 84 84 LEU LEU A . n A 1 104 GLN 104 85 85 GLN GLN A . n A 1 105 MSE 105 86 86 MSE MSE A . n A 1 106 TYR 106 87 87 TYR TYR A . n A 1 107 GLN 107 88 88 GLN GLN A . n A 1 108 HIS 108 89 89 HIS HIS A . n A 1 109 ALA 109 90 90 ALA ALA A . n A 1 110 SER 110 91 91 SER SER A . n A 1 111 LEU 111 92 92 LEU LEU A . n A 1 112 HIS 112 93 93 HIS HIS A . n A 1 113 PHE 113 94 94 PHE PHE A . n A 1 114 SER 114 95 95 SER SER A . n A 1 115 GLU 115 96 96 GLU GLU A . n A 1 116 THR 116 97 97 THR THR A . n A 1 117 PRO 117 98 98 PRO PRO A . n A 1 118 GLY 118 99 99 GLY GLY A . n A 1 119 LEU 119 100 100 LEU LEU A . n A 1 120 GLN 120 101 101 GLN GLN A . n A 1 121 SER 121 102 102 SER SER A . n A 1 122 THR 122 103 103 THR THR A . n A 1 123 LYS 123 104 104 LYS LYS A . n A 1 124 LEU 124 105 105 LEU LEU A . n A 1 125 THR 125 106 106 THR THR A . n A 1 126 LYS 126 107 107 LYS LYS A . n A 1 127 ALA 127 108 108 ALA ALA A . n A 1 128 MSE 128 109 109 MSE MSE A . n A 1 129 ASN 129 110 110 ASN ASN A . n A 1 130 THR 130 111 111 THR THR A . n A 1 131 ASN 131 112 112 ASN ASN A . n A 1 132 GLN 132 113 113 GLN GLN A . n A 1 133 PHE 133 114 114 PHE PHE A . n A 1 134 LEU 134 115 115 LEU LEU A . n A 1 135 ILE 135 116 116 ILE ILE A . n A 1 136 VAL 136 117 117 VAL VAL A . n A 1 137 SER 137 118 118 SER SER A . n A 1 138 PHE 138 119 119 PHE PHE A . n A 1 139 TRP 139 120 120 TRP TRP A . n A 1 140 ASP 140 121 121 ASP ASP A . n A 1 141 SER 141 122 122 SER SER A . n A 1 142 GLU 142 123 123 GLU GLU A . n A 1 143 VAL 143 124 124 VAL VAL A . n A 1 144 PHE 144 125 125 PHE PHE A . n A 1 145 PHE 145 126 126 PHE PHE A . n A 1 146 GLN 146 127 127 GLN GLN A . n A 1 147 GLU 147 128 128 GLU GLU A . n A 1 148 TRP 148 129 129 TRP TRP A . n A 1 149 LYS 149 130 130 LYS LYS A . n A 1 150 LYS 150 131 131 LYS LYS A . n A 1 151 THR 151 132 132 THR THR A . n A 1 152 PRO 152 133 133 PRO PRO A . n A 1 153 LEU 153 134 134 LEU LEU A . n A 1 154 HIS 154 135 135 HIS HIS A . n A 1 155 LYS 155 136 136 LYS LYS A . n A 1 156 GLU 156 137 137 GLU GLU A . n A 1 157 ILE 157 138 138 ILE ILE A . n A 1 158 THR 158 139 139 THR THR A . n A 1 159 SER 159 140 140 SER SER A . n A 1 160 ILE 160 141 141 ILE ILE A . n A 1 161 MSE 161 142 142 MSE MSE A . n A 1 162 LYS 162 143 143 LYS LYS A . n A 1 163 LYS 163 144 144 LYS LYS A . n A 1 164 ASN 164 145 145 ASN ASN A . n A 1 165 ASN 165 146 146 ASN ASN A . n A 1 166 THR 166 147 147 THR THR A . n A 1 167 GLN 167 148 148 GLN GLN A . n A 1 168 VAL 168 149 149 VAL VAL A . n A 1 169 GLY 169 150 150 GLY GLY A . n A 1 170 PHE 170 151 151 PHE PHE A . n A 1 171 SER 171 152 152 SER SER A . n A 1 172 HIS 172 153 153 HIS HIS A . n A 1 173 GLU 173 154 154 GLU GLU A . n A 1 174 ASP 174 155 155 ASP ASP A . n A 1 175 ILE 175 156 156 ILE ILE A . n A 1 176 TYR 176 157 157 TYR TYR A . n A 1 177 HIS 177 158 158 HIS HIS A . n A 1 178 TYR 178 159 159 TYR TYR A . n A 1 179 PRO 179 160 160 PRO PRO A . n A 1 180 GLU 180 161 161 GLU GLU A . n A 1 181 PHE 181 162 162 PHE PHE A . n A 1 182 SER 182 163 163 SER SER A . n A 1 183 HIS 183 164 ? ? ? A . n A 1 184 ASP 184 165 ? ? ? A . n A 1 185 ALA 185 166 ? ? ? A . n A 1 186 LYS 186 167 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 168 1 GOL GOL A . C 2 GOL 1 169 2 GOL GOL A . D 2 GOL 1 170 3 GOL GOL A . E 2 GOL 1 171 4 GOL GOL A . F 3 HOH 1 172 172 HOH HOH A . F 3 HOH 2 173 173 HOH HOH A . F 3 HOH 3 174 174 HOH HOH A . F 3 HOH 4 175 175 HOH HOH A . F 3 HOH 5 176 176 HOH HOH A . F 3 HOH 6 177 177 HOH HOH A . F 3 HOH 7 178 178 HOH HOH A . F 3 HOH 8 179 179 HOH HOH A . F 3 HOH 9 180 180 HOH HOH A . F 3 HOH 10 181 181 HOH HOH A . F 3 HOH 11 182 182 HOH HOH A . F 3 HOH 12 183 183 HOH HOH A . F 3 HOH 13 184 184 HOH HOH A . F 3 HOH 14 185 185 HOH HOH A . F 3 HOH 15 186 186 HOH HOH A . F 3 HOH 16 187 187 HOH HOH A . F 3 HOH 17 188 5 HOH HOH A . F 3 HOH 18 189 6 HOH HOH A . F 3 HOH 19 190 7 HOH HOH A . F 3 HOH 20 191 8 HOH HOH A . F 3 HOH 21 192 9 HOH HOH A . F 3 HOH 22 193 10 HOH HOH A . F 3 HOH 23 194 11 HOH HOH A . F 3 HOH 24 195 12 HOH HOH A . F 3 HOH 25 196 13 HOH HOH A . F 3 HOH 26 197 14 HOH HOH A . F 3 HOH 27 198 15 HOH HOH A . F 3 HOH 28 199 16 HOH HOH A . F 3 HOH 29 200 17 HOH HOH A . F 3 HOH 30 201 18 HOH HOH A . F 3 HOH 31 202 19 HOH HOH A . F 3 HOH 32 203 20 HOH HOH A . F 3 HOH 33 204 21 HOH HOH A . F 3 HOH 34 205 22 HOH HOH A . F 3 HOH 35 206 23 HOH HOH A . F 3 HOH 36 207 24 HOH HOH A . F 3 HOH 37 208 25 HOH HOH A . F 3 HOH 38 209 26 HOH HOH A . F 3 HOH 39 210 27 HOH HOH A . F 3 HOH 40 211 28 HOH HOH A . F 3 HOH 41 212 29 HOH HOH A . F 3 HOH 42 213 30 HOH HOH A . F 3 HOH 43 214 31 HOH HOH A . F 3 HOH 44 215 32 HOH HOH A . F 3 HOH 45 216 33 HOH HOH A . F 3 HOH 46 217 34 HOH HOH A . F 3 HOH 47 218 35 HOH HOH A . F 3 HOH 48 219 36 HOH HOH A . F 3 HOH 49 220 37 HOH HOH A . F 3 HOH 50 221 38 HOH HOH A . F 3 HOH 51 222 39 HOH HOH A . F 3 HOH 52 223 40 HOH HOH A . F 3 HOH 53 224 41 HOH HOH A . F 3 HOH 54 225 42 HOH HOH A . F 3 HOH 55 226 43 HOH HOH A . F 3 HOH 56 227 44 HOH HOH A . F 3 HOH 57 228 45 HOH HOH A . F 3 HOH 58 229 46 HOH HOH A . F 3 HOH 59 230 47 HOH HOH A . F 3 HOH 60 231 48 HOH HOH A . F 3 HOH 61 232 49 HOH HOH A . F 3 HOH 62 233 50 HOH HOH A . F 3 HOH 63 234 51 HOH HOH A . F 3 HOH 64 235 52 HOH HOH A . F 3 HOH 65 236 53 HOH HOH A . F 3 HOH 66 237 54 HOH HOH A . F 3 HOH 67 238 55 HOH HOH A . F 3 HOH 68 239 56 HOH HOH A . F 3 HOH 69 240 57 HOH HOH A . F 3 HOH 70 241 58 HOH HOH A . F 3 HOH 71 242 59 HOH HOH A . F 3 HOH 72 243 60 HOH HOH A . F 3 HOH 73 244 61 HOH HOH A . F 3 HOH 74 245 62 HOH HOH A . F 3 HOH 75 246 63 HOH HOH A . F 3 HOH 76 247 64 HOH HOH A . F 3 HOH 77 248 65 HOH HOH A . F 3 HOH 78 249 66 HOH HOH A . F 3 HOH 79 250 67 HOH HOH A . F 3 HOH 80 251 68 HOH HOH A . F 3 HOH 81 252 69 HOH HOH A . F 3 HOH 82 253 70 HOH HOH A . F 3 HOH 83 254 71 HOH HOH A . F 3 HOH 84 255 72 HOH HOH A . F 3 HOH 85 256 73 HOH HOH A . F 3 HOH 86 257 74 HOH HOH A . F 3 HOH 87 258 75 HOH HOH A . F 3 HOH 88 259 76 HOH HOH A . F 3 HOH 89 260 77 HOH HOH A . F 3 HOH 90 261 78 HOH HOH A . F 3 HOH 91 262 79 HOH HOH A . F 3 HOH 92 263 80 HOH HOH A . F 3 HOH 93 264 81 HOH HOH A . F 3 HOH 94 265 82 HOH HOH A . F 3 HOH 95 266 83 HOH HOH A . F 3 HOH 96 267 84 HOH HOH A . F 3 HOH 97 268 85 HOH HOH A . F 3 HOH 98 269 86 HOH HOH A . F 3 HOH 99 270 87 HOH HOH A . F 3 HOH 100 271 88 HOH HOH A . F 3 HOH 101 272 89 HOH HOH A . F 3 HOH 102 273 90 HOH HOH A . F 3 HOH 103 274 91 HOH HOH A . F 3 HOH 104 275 92 HOH HOH A . F 3 HOH 105 276 93 HOH HOH A . F 3 HOH 106 277 94 HOH HOH A . F 3 HOH 107 278 95 HOH HOH A . F 3 HOH 108 279 96 HOH HOH A . F 3 HOH 109 280 97 HOH HOH A . F 3 HOH 110 281 98 HOH HOH A . F 3 HOH 111 282 99 HOH HOH A . F 3 HOH 112 283 100 HOH HOH A . F 3 HOH 113 284 101 HOH HOH A . F 3 HOH 114 285 102 HOH HOH A . F 3 HOH 115 286 103 HOH HOH A . F 3 HOH 116 287 104 HOH HOH A . F 3 HOH 117 288 105 HOH HOH A . F 3 HOH 118 289 106 HOH HOH A . F 3 HOH 119 290 107 HOH HOH A . F 3 HOH 120 291 108 HOH HOH A . F 3 HOH 121 292 109 HOH HOH A . F 3 HOH 122 293 110 HOH HOH A . F 3 HOH 123 294 111 HOH HOH A . F 3 HOH 124 295 112 HOH HOH A . F 3 HOH 125 296 113 HOH HOH A . F 3 HOH 126 297 114 HOH HOH A . F 3 HOH 127 298 115 HOH HOH A . F 3 HOH 128 299 116 HOH HOH A . F 3 HOH 129 300 117 HOH HOH A . F 3 HOH 130 301 118 HOH HOH A . F 3 HOH 131 302 119 HOH HOH A . F 3 HOH 132 303 120 HOH HOH A . F 3 HOH 133 304 121 HOH HOH A . F 3 HOH 134 305 122 HOH HOH A . F 3 HOH 135 306 123 HOH HOH A . F 3 HOH 136 307 124 HOH HOH A . F 3 HOH 137 308 125 HOH HOH A . F 3 HOH 138 309 126 HOH HOH A . F 3 HOH 139 310 127 HOH HOH A . F 3 HOH 140 311 128 HOH HOH A . F 3 HOH 141 312 129 HOH HOH A . F 3 HOH 142 313 130 HOH HOH A . F 3 HOH 143 314 131 HOH HOH A . F 3 HOH 144 315 132 HOH HOH A . F 3 HOH 145 316 133 HOH HOH A . F 3 HOH 146 317 134 HOH HOH A . F 3 HOH 147 318 135 HOH HOH A . F 3 HOH 148 319 136 HOH HOH A . F 3 HOH 149 320 137 HOH HOH A . F 3 HOH 150 321 138 HOH HOH A . F 3 HOH 151 322 139 HOH HOH A . F 3 HOH 152 323 140 HOH HOH A . F 3 HOH 153 324 141 HOH HOH A . F 3 HOH 154 325 142 HOH HOH A . F 3 HOH 155 326 143 HOH HOH A . F 3 HOH 156 327 144 HOH HOH A . F 3 HOH 157 328 145 HOH HOH A . F 3 HOH 158 329 146 HOH HOH A . F 3 HOH 159 330 147 HOH HOH A . F 3 HOH 160 331 148 HOH HOH A . F 3 HOH 161 332 149 HOH HOH A . F 3 HOH 162 333 150 HOH HOH A . F 3 HOH 163 334 151 HOH HOH A . F 3 HOH 164 335 152 HOH HOH A . F 3 HOH 165 336 153 HOH HOH A . F 3 HOH 166 337 154 HOH HOH A . F 3 HOH 167 338 155 HOH HOH A . F 3 HOH 168 339 156 HOH HOH A . F 3 HOH 169 340 157 HOH HOH A . F 3 HOH 170 341 158 HOH HOH A . F 3 HOH 171 342 159 HOH HOH A . F 3 HOH 172 343 160 HOH HOH A . F 3 HOH 173 344 161 HOH HOH A . F 3 HOH 174 345 162 HOH HOH A . F 3 HOH 175 346 163 HOH HOH A . F 3 HOH 176 347 164 HOH HOH A . F 3 HOH 177 348 165 HOH HOH A . F 3 HOH 178 349 166 HOH HOH A . F 3 HOH 179 350 167 HOH HOH A . F 3 HOH 180 351 168 HOH HOH A . F 3 HOH 181 352 169 HOH HOH A . F 3 HOH 182 353 170 HOH HOH A . F 3 HOH 183 354 171 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 37 A MSE 18 ? MET SELENOMETHIONINE 3 A MSE 105 A MSE 86 ? MET SELENOMETHIONINE 4 A MSE 128 A MSE 109 ? MET SELENOMETHIONINE 5 A MSE 161 A MSE 142 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 211 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 25.1356 _pdbx_refine_tls.origin_y 77.3003 _pdbx_refine_tls.origin_z 16.7593 _pdbx_refine_tls.T[1][1] 0.0156 _pdbx_refine_tls.T[2][2] -0.1045 _pdbx_refine_tls.T[3][3] -0.0568 _pdbx_refine_tls.T[1][2] 0.0874 _pdbx_refine_tls.T[1][3] -0.0078 _pdbx_refine_tls.T[2][3] 0.0064 _pdbx_refine_tls.L[1][1] 0.8846 _pdbx_refine_tls.L[2][2] 1.6773 _pdbx_refine_tls.L[3][3] 1.6367 _pdbx_refine_tls.L[1][2] -0.5097 _pdbx_refine_tls.L[1][3] -0.2485 _pdbx_refine_tls.L[2][3] 0.2648 _pdbx_refine_tls.S[1][1] -0.0241 _pdbx_refine_tls.S[2][2] 0.0815 _pdbx_refine_tls.S[3][3] -0.0574 _pdbx_refine_tls.S[1][2] -0.1153 _pdbx_refine_tls.S[1][3] -0.0019 _pdbx_refine_tls.S[2][3] 0.0843 _pdbx_refine_tls.S[2][1] -0.1579 _pdbx_refine_tls.S[3][1] -0.2885 _pdbx_refine_tls.S[3][2] -0.0661 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_seq_id -6 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 163 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3FJ2 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG.' _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.571 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.379 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 76 ? A CZ A ARG 76 ? A NH1 A ARG 76 ? A 123.32 120.30 3.02 0.50 N 2 1 NE A ARG 76 ? A CZ A ARG 76 ? A NH2 A ARG 76 ? A 116.91 120.30 -3.39 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 46 ? ? 50.04 -122.25 2 1 LEU A 46 ? ? 51.29 -122.25 3 1 PHE A 162 ? B 102.87 124.49 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? NZ ? A LYS 21 NZ 2 1 Y 1 A PHE 32 ? CG ? A PHE 51 CG 3 1 Y 1 A PHE 32 ? CD1 ? A PHE 51 CD1 4 1 Y 1 A PHE 32 ? CD2 ? A PHE 51 CD2 5 1 Y 1 A PHE 32 ? CE1 ? A PHE 51 CE1 6 1 Y 1 A PHE 32 ? CE2 ? A PHE 51 CE2 7 1 Y 1 A PHE 32 ? CZ ? A PHE 51 CZ 8 1 Y 1 A LYS 143 ? CD ? A LYS 162 CD 9 1 Y 1 A LYS 143 ? CE ? A LYS 162 CE 10 1 Y 1 A LYS 143 ? NZ ? A LYS 162 NZ 11 1 Y 1 A LYS 144 ? CD ? A LYS 163 CD 12 1 Y 1 A LYS 144 ? CE ? A LYS 163 CE 13 1 Y 1 A LYS 144 ? NZ ? A LYS 163 NZ 14 1 Y 1 A GLU 161 ? CG ? A GLU 180 CG 15 1 Y 1 A GLU 161 ? CD ? A GLU 180 CD 16 1 Y 1 A GLU 161 ? OE1 ? A GLU 180 OE1 17 1 Y 1 A GLU 161 ? OE2 ? A GLU 180 OE2 18 1 Y 1 A SER 163 ? OG ? A SER 182 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A HIS -8 ? A HIS 11 12 1 Y 1 A HIS -7 ? A HIS 12 13 1 Y 1 A HIS 164 ? A HIS 183 14 1 Y 1 A ASP 165 ? A ASP 184 15 1 Y 1 A ALA 166 ? A ALA 185 16 1 Y 1 A LYS 167 ? A LYS 186 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #