HEADER TRANSCRIPTION 15-DEC-08 3FK3 TITLE STRUCTURE OF THE YEATS DOMAIN, YAF9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN AF-9 HOMOLOG; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: YEATS DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: N1966, YAF9, YNL107W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-SANDWICH, ACTIVATOR, CHROMATIN REGULATOR, DNA DAMAGE, DNA KEYWDS 2 REPAIR, NUCLEUS, TRANSCRIPTION, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR A.Y.WANG,J.M.SCHULZE,E.SKORDALAKES,J.M.BERGER,J.RINE,M.S.KOBOR REVDAT 5 31-MAR-21 3FK3 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 3FK3 1 VERSN REVDAT 3 02-MAR-11 3FK3 1 AUTHOR REVDAT 2 02-FEB-10 3FK3 1 JRNL REVDAT 1 27-OCT-09 3FK3 0 JRNL AUTH A.Y.WANG,J.M.SCHULZE,E.SKORDALAKES,J.W.GIN,J.M.BERGER, JRNL AUTH 2 J.RINE,M.S.KOBOR JRNL TITL ASF1-LIKE STRUCTURE OF THE CONSERVED YAF9 YEATS DOMAIN AND JRNL TITL 2 ROLE IN H2A.Z DEPOSITION AND ACETYLATION JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 21573 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19966225 JRNL DOI 10.1073/PNAS.0906539106 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 24936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1323 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1138 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3471 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.87000 REMARK 3 B22 (A**2) : -1.87000 REMARK 3 B33 (A**2) : 2.80000 REMARK 3 B12 (A**2) : -0.93000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.320 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.237 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.175 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.958 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3576 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4851 ; 0.989 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 414 ; 6.000 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;39.368 ;23.559 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 597 ;14.944 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;15.738 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 516 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2754 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1445 ; 0.184 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2398 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 191 ; 0.105 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 59 ; 0.946 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.077 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2179 ; 0.330 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3459 ; 0.551 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1599 ; 0.521 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1392 ; 0.799 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 19.6956 51.4534 58.1328 REMARK 3 T TENSOR REMARK 3 T11: -0.0142 T22: -0.0708 REMARK 3 T33: -0.1073 T12: -0.0157 REMARK 3 T13: 0.0607 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 5.1142 L22: 0.8389 REMARK 3 L33: 1.0136 L12: -0.1658 REMARK 3 L13: -0.8758 L23: -0.0621 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: 0.1186 S13: 0.1644 REMARK 3 S21: -0.0999 S22: -0.0038 S23: -0.0351 REMARK 3 S31: -0.0511 S32: 0.0995 S33: 0.0317 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 169 REMARK 3 ORIGIN FOR THE GROUP (A): -19.9605 56.0865 62.7531 REMARK 3 T TENSOR REMARK 3 T11: -0.0691 T22: -0.0680 REMARK 3 T33: -0.0741 T12: 0.0110 REMARK 3 T13: 0.0181 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 1.7532 L22: 4.1646 REMARK 3 L33: 0.9239 L12: -1.9735 REMARK 3 L13: -0.1535 L23: 0.2789 REMARK 3 S TENSOR REMARK 3 S11: 0.0363 S12: 0.0736 S13: 0.0110 REMARK 3 S21: -0.0725 S22: -0.0941 S23: 0.1067 REMARK 3 S31: -0.0802 S32: -0.1489 S33: 0.0579 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 169 REMARK 3 ORIGIN FOR THE GROUP (A): -3.9136 19.1247 60.7895 REMARK 3 T TENSOR REMARK 3 T11: -0.0245 T22: -0.0753 REMARK 3 T33: -0.1224 T12: 0.0009 REMARK 3 T13: 0.0253 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.9822 L22: 4.3897 REMARK 3 L33: 0.8058 L12: 2.0929 REMARK 3 L13: -0.1117 L23: -0.1835 REMARK 3 S TENSOR REMARK 3 S11: -0.0720 S12: 0.0883 S13: -0.1569 REMARK 3 S21: -0.2720 S22: 0.0572 S23: -0.1475 REMARK 3 S31: 0.1207 S32: -0.0319 S33: 0.0148 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FK3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050686. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587, 0.9795, 1.0199 REMARK 200 MONOCHROMATOR : KHOZU DOUBLE FLAT CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24936 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36800 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 3350, 100 MM NA, TARTRATE, 20% REMARK 280 GLYCEROL, PH 7.5, MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 192.14133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.07067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 144.10600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.03533 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 240.17667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 192.14133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 96.07067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 48.03533 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 144.10600 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 240.17667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 120 REMARK 465 ALA A 121 REMARK 465 ASN A 122 REMARK 465 PRO A 123 REMARK 465 VAL A 124 REMARK 465 PRO A 125 REMARK 465 ASN A 126 REMARK 465 SER A 127 REMARK 465 ASP A 128 REMARK 465 ASN A 129 REMARK 465 GLY A 130 REMARK 465 ASN A 131 REMARK 465 GLU A 132 REMARK 465 GLN A 133 REMARK 465 ASN A 134 REMARK 465 THR A 135 REMARK 465 THR A 136 REMARK 465 ASP A 137 REMARK 465 HIS A 138 REMARK 465 ASN A 139 REMARK 465 SER A 140 REMARK 465 LYS A 141 REMARK 465 ASP A 142 REMARK 465 ALA A 143 REMARK 465 TYR B 120 REMARK 465 ALA B 121 REMARK 465 ASN B 122 REMARK 465 PRO B 123 REMARK 465 VAL B 124 REMARK 465 PRO B 125 REMARK 465 ASN B 126 REMARK 465 SER B 127 REMARK 465 ASP B 128 REMARK 465 ASN B 129 REMARK 465 GLY B 130 REMARK 465 ASN B 131 REMARK 465 GLU B 132 REMARK 465 GLN B 133 REMARK 465 ASN B 134 REMARK 465 THR B 135 REMARK 465 THR B 136 REMARK 465 ASP B 137 REMARK 465 HIS B 138 REMARK 465 ASN B 139 REMARK 465 SER B 140 REMARK 465 LYS B 141 REMARK 465 ASP B 142 REMARK 465 ALA B 143 REMARK 465 TYR C 120 REMARK 465 ALA C 121 REMARK 465 ASN C 122 REMARK 465 PRO C 123 REMARK 465 VAL C 124 REMARK 465 PRO C 125 REMARK 465 ASN C 126 REMARK 465 SER C 127 REMARK 465 ASP C 128 REMARK 465 ASN C 129 REMARK 465 GLY C 130 REMARK 465 ASN C 131 REMARK 465 GLU C 132 REMARK 465 GLN C 133 REMARK 465 ASN C 134 REMARK 465 THR C 135 REMARK 465 THR C 136 REMARK 465 ASP C 137 REMARK 465 HIS C 138 REMARK 465 ASN C 139 REMARK 465 SER C 140 REMARK 465 LYS C 141 REMARK 465 ASP C 142 REMARK 465 ALA C 143 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 34 -1.33 74.79 REMARK 500 ASP A 151 -160.47 -113.29 REMARK 500 ASP B 151 -158.84 -111.79 REMARK 500 SER C 29 -39.03 -136.69 REMARK 500 PRO C 32 155.72 -46.67 REMARK 500 ASP C 151 -163.58 -117.13 REMARK 500 REMARK 500 REMARK: NULL DBREF 3FK3 A 8 169 UNP P53930 AF9_YEAST 8 169 DBREF 3FK3 B 8 169 UNP P53930 AF9_YEAST 8 169 DBREF 3FK3 C 8 169 UNP P53930 AF9_YEAST 8 169 SEQADV 3FK3 GLY A 6 UNP P53930 EXPRESSION TAG SEQADV 3FK3 ALA A 7 UNP P53930 EXPRESSION TAG SEQADV 3FK3 GLY B 6 UNP P53930 EXPRESSION TAG SEQADV 3FK3 ALA B 7 UNP P53930 EXPRESSION TAG SEQADV 3FK3 GLY C 6 UNP P53930 EXPRESSION TAG SEQADV 3FK3 ALA C 7 UNP P53930 EXPRESSION TAG SEQRES 1 A 164 GLY ALA ARG ILE LYS THR LEU SER VAL SER ARG PRO ILE SEQRES 2 A 164 ILE TYR GLY ASN THR ALA LYS LYS MSE GLY SER VAL LYS SEQRES 3 A 164 PRO PRO ASN ALA PRO ALA GLU HIS THR HIS LEU TRP THR SEQRES 4 A 164 ILE PHE VAL ARG GLY PRO GLN ASN GLU ASP ILE SER TYR SEQRES 5 A 164 PHE ILE LYS LYS VAL VAL PHE LYS LEU HIS ASP THR TYR SEQRES 6 A 164 PRO ASN PRO VAL ARG SER ILE GLU ALA PRO PRO PHE GLU SEQRES 7 A 164 LEU THR GLU THR GLY TRP GLY GLU PHE ASP ILE ASN ILE SEQRES 8 A 164 LYS VAL TYR PHE VAL GLU GLU ALA ASN GLU LYS VAL LEU SEQRES 9 A 164 ASN PHE TYR HIS ARG LEU ARG LEU HIS PRO TYR ALA ASN SEQRES 10 A 164 PRO VAL PRO ASN SER ASP ASN GLY ASN GLU GLN ASN THR SEQRES 11 A 164 THR ASP HIS ASN SER LYS ASP ALA GLU VAL SER SER VAL SEQRES 12 A 164 TYR PHE ASP GLU ILE VAL PHE ASN GLU PRO ASN GLU GLU SEQRES 13 A 164 PHE PHE LYS ILE LEU MSE SER ARG SEQRES 1 B 164 GLY ALA ARG ILE LYS THR LEU SER VAL SER ARG PRO ILE SEQRES 2 B 164 ILE TYR GLY ASN THR ALA LYS LYS MSE GLY SER VAL LYS SEQRES 3 B 164 PRO PRO ASN ALA PRO ALA GLU HIS THR HIS LEU TRP THR SEQRES 4 B 164 ILE PHE VAL ARG GLY PRO GLN ASN GLU ASP ILE SER TYR SEQRES 5 B 164 PHE ILE LYS LYS VAL VAL PHE LYS LEU HIS ASP THR TYR SEQRES 6 B 164 PRO ASN PRO VAL ARG SER ILE GLU ALA PRO PRO PHE GLU SEQRES 7 B 164 LEU THR GLU THR GLY TRP GLY GLU PHE ASP ILE ASN ILE SEQRES 8 B 164 LYS VAL TYR PHE VAL GLU GLU ALA ASN GLU LYS VAL LEU SEQRES 9 B 164 ASN PHE TYR HIS ARG LEU ARG LEU HIS PRO TYR ALA ASN SEQRES 10 B 164 PRO VAL PRO ASN SER ASP ASN GLY ASN GLU GLN ASN THR SEQRES 11 B 164 THR ASP HIS ASN SER LYS ASP ALA GLU VAL SER SER VAL SEQRES 12 B 164 TYR PHE ASP GLU ILE VAL PHE ASN GLU PRO ASN GLU GLU SEQRES 13 B 164 PHE PHE LYS ILE LEU MSE SER ARG SEQRES 1 C 164 GLY ALA ARG ILE LYS THR LEU SER VAL SER ARG PRO ILE SEQRES 2 C 164 ILE TYR GLY ASN THR ALA LYS LYS MSE GLY SER VAL LYS SEQRES 3 C 164 PRO PRO ASN ALA PRO ALA GLU HIS THR HIS LEU TRP THR SEQRES 4 C 164 ILE PHE VAL ARG GLY PRO GLN ASN GLU ASP ILE SER TYR SEQRES 5 C 164 PHE ILE LYS LYS VAL VAL PHE LYS LEU HIS ASP THR TYR SEQRES 6 C 164 PRO ASN PRO VAL ARG SER ILE GLU ALA PRO PRO PHE GLU SEQRES 7 C 164 LEU THR GLU THR GLY TRP GLY GLU PHE ASP ILE ASN ILE SEQRES 8 C 164 LYS VAL TYR PHE VAL GLU GLU ALA ASN GLU LYS VAL LEU SEQRES 9 C 164 ASN PHE TYR HIS ARG LEU ARG LEU HIS PRO TYR ALA ASN SEQRES 10 C 164 PRO VAL PRO ASN SER ASP ASN GLY ASN GLU GLN ASN THR SEQRES 11 C 164 THR ASP HIS ASN SER LYS ASP ALA GLU VAL SER SER VAL SEQRES 12 C 164 TYR PHE ASP GLU ILE VAL PHE ASN GLU PRO ASN GLU GLU SEQRES 13 C 164 PHE PHE LYS ILE LEU MSE SER ARG MODRES 3FK3 MSE A 27 MET SELENOMETHIONINE MODRES 3FK3 MSE A 167 MET SELENOMETHIONINE MODRES 3FK3 MSE B 27 MET SELENOMETHIONINE MODRES 3FK3 MSE B 167 MET SELENOMETHIONINE MODRES 3FK3 MSE C 27 MET SELENOMETHIONINE MODRES 3FK3 MSE C 167 MET SELENOMETHIONINE HET MSE A 27 8 HET MSE A 167 8 HET MSE B 27 8 HET MSE B 167 8 HET MSE C 27 8 HET MSE C 167 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 4 HOH *207(H2 O) HELIX 1 1 GLY A 49 GLU A 53 5 5 HELIX 2 2 GLU A 102 ASN A 105 5 4 HELIX 3 3 ASN A 159 ARG A 169 1 11 HELIX 4 4 GLY B 49 GLU B 53 5 5 HELIX 5 5 GLU B 102 ASN B 105 5 4 HELIX 6 6 ASN B 159 ARG B 169 1 11 HELIX 7 7 GLY C 49 GLU C 53 5 5 HELIX 8 8 GLU C 102 ASN C 105 5 4 HELIX 9 9 ASN C 159 SER C 168 1 10 SHEET 1 A 5 ALA A 7 THR A 11 0 SHEET 2 A 5 VAL B 145 ASN B 156 -1 O GLU B 152 N LYS A 10 SHEET 3 A 5 SER B 13 LYS B 26 -1 N TYR B 20 O TYR B 149 SHEET 4 A 5 HIS B 41 ARG B 48 -1 O ARG B 48 N ILE B 19 SHEET 5 A 5 PHE B 82 GLY B 88 -1 O GLY B 88 N HIS B 41 SHEET 1 B 5 PHE A 82 GLY A 88 0 SHEET 2 B 5 HIS A 41 ARG A 48 -1 N HIS A 41 O GLY A 88 SHEET 3 B 5 SER A 13 LYS A 26 -1 N ILE A 19 O ARG A 48 SHEET 4 B 5 VAL A 145 ASN A 156 -1 O PHE A 155 N VAL A 14 SHEET 5 B 5 ALA C 7 LYS C 10 -1 O ARG C 8 N VAL A 154 SHEET 1 C 4 VAL A 74 ILE A 77 0 SHEET 2 C 4 ILE A 59 LYS A 65 -1 N VAL A 62 O ILE A 77 SHEET 3 C 4 ASP A 93 PHE A 100 -1 O LYS A 97 N VAL A 63 SHEET 4 C 4 LEU A 109 ARG A 114 -1 O LEU A 109 N VAL A 98 SHEET 1 D 5 ALA B 7 THR B 11 0 SHEET 2 D 5 VAL C 145 ASN C 156 -1 O GLU C 152 N LYS B 10 SHEET 3 D 5 SER C 13 LYS C 26 -1 N VAL C 14 O PHE C 155 SHEET 4 D 5 HIS C 41 ARG C 48 -1 O ARG C 48 N ILE C 19 SHEET 5 D 5 PHE C 82 GLY C 88 -1 O GLY C 88 N HIS C 41 SHEET 1 E 4 VAL B 74 ILE B 77 0 SHEET 2 E 4 ILE B 59 LYS B 65 -1 N VAL B 62 O ILE B 77 SHEET 3 E 4 ASP B 93 PHE B 100 -1 O LYS B 97 N VAL B 63 SHEET 4 E 4 LEU B 109 ARG B 114 -1 O HIS B 113 N ILE B 94 SHEET 1 F 4 VAL C 74 ILE C 77 0 SHEET 2 F 4 ILE C 59 LYS C 65 -1 N PHE C 64 O ARG C 75 SHEET 3 F 4 ASP C 93 PHE C 100 -1 O TYR C 99 N LYS C 61 SHEET 4 F 4 LEU C 109 ARG C 114 -1 O PHE C 111 N ILE C 96 LINK C LYS A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N GLY A 28 1555 1555 1.33 LINK C LEU A 166 N MSE A 167 1555 1555 1.33 LINK C MSE A 167 N SER A 168 1555 1555 1.33 LINK C LYS B 26 N MSE B 27 1555 1555 1.33 LINK C MSE B 27 N GLY B 28 1555 1555 1.33 LINK C LEU B 166 N MSE B 167 1555 1555 1.33 LINK C MSE B 167 N SER B 168 1555 1555 1.33 LINK C LYS C 26 N MSE C 27 1555 1555 1.33 LINK C MSE C 27 N GLY C 28 1555 1555 1.33 LINK C LEU C 166 N MSE C 167 1555 1555 1.33 LINK C MSE C 167 N SER C 168 1555 1555 1.33 CISPEP 1 PRO A 80 PRO A 81 0 -0.36 CISPEP 2 PRO B 80 PRO B 81 0 -3.12 CISPEP 3 PRO C 80 PRO C 81 0 -2.32 CRYST1 84.725 84.725 288.212 90.00 90.00 120.00 P 65 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011803 0.006814 0.000000 0.00000 SCALE2 0.000000 0.013629 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003470 0.00000