data_3FL2 # _entry.id 3FL2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FL2 pdb_00003fl2 10.2210/pdb3fl2/pdb RCSB RCSB050721 ? ? WWPDB D_1000050721 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BI7 ;CRYSTAL STRUCTURE OF THE SRA DOMAIN OF E3 UBIQUITIN-PROTEIN LIGASE UHRF1 ; unspecified PDB 3CLZ ;THE SET AND RING ASSOCIATED (SRA) DOMAIN OF UHRF1 BOUND TO METHYLATED DNA ; unspecified PDB 2FAZ ;UBIQUITIN-LIKE DOMAIN OF HUMAN NUCLEAR ZINC FINGER PROTEIN NP95 ; unspecified PDB 3DB4 ;STRUCTURE OF THE TANDEM TUDOR DOMAINS OF THE E3 UBIQUITIN- PROTEIN LIGASE UHRF1 ; unspecified PDB 3DB3 ;CRYSTAL STRUCTURE OF THE TANDEM TUDOR DOMAINS OF THE E3 UBIQUITIN-PROTEIN LIGASE UHRF1 IN COMPLEX WITH TRIMETHYLATED HISTONE H3-K9 PEPTIDE ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FL2 _pdbx_database_status.recvd_initial_deposition_date 2008-12-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Walker, J.R.' 1 'Avvakumov, G.V.' 2 'Xue, S.' 3 'Li, Y.' 4 'Bountra, C.' 5 'Weigelt, J.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Bochkarev, A.' 9 'Dhe-Paganon, S.' 10 'Structural Genomics Consortium (SGC)' 11 # _citation.id primary _citation.title 'Structure of the Ring Domain of the E3 Ubiquitin-Protein Ligase Uhrf1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Walker, J.R.' 1 ? primary 'Avvakumov, G.V.' 2 ? primary 'Xue, S.' 3 ? primary 'Li, Y.' 4 ? primary 'Bountra, C.' 5 ? primary 'Weigelt, J.' 6 ? primary 'Arrowsmith, C.H.' 7 ? primary 'Edwards, A.M.' 8 ? primary 'Bochkarev, A.' 9 ? primary 'Dhe-Paganon, S.' 10 ? # _cell.entry_id 3FL2 _cell.length_a 45.736 _cell.length_b 46.916 _cell.length_c 48.409 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FL2 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase UHRF1' 14002.911 1 6.3.2.- ? 'ring domain (UNP residues 672-793)' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 water nat water 18.015 96 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Ubiquitin-like PHD and RING finger domain-containing protein 1, Ubiquitin-like-containing PHD and RING finger domains protein 1, Inverted CCAAT box-binding protein of 90 kDa, Transcription factor ICBP90, Nuclear zinc finger protein Np95, Nuclear protein 95, HuNp95, RING finger protein 106 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLD RSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFPGYGNGR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLD RSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFPGYGNGR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLU n 1 4 PRO n 1 5 TYR n 1 6 SER n 1 7 LEU n 1 8 THR n 1 9 ALA n 1 10 GLN n 1 11 GLN n 1 12 SER n 1 13 SER n 1 14 LEU n 1 15 ILE n 1 16 ARG n 1 17 GLU n 1 18 ASP n 1 19 LYS n 1 20 SER n 1 21 ASN n 1 22 ALA n 1 23 LYS n 1 24 LEU n 1 25 TRP n 1 26 ASN n 1 27 GLU n 1 28 VAL n 1 29 LEU n 1 30 ALA n 1 31 SER n 1 32 LEU n 1 33 LYS n 1 34 ASP n 1 35 ARG n 1 36 PRO n 1 37 ALA n 1 38 SER n 1 39 GLY n 1 40 SER n 1 41 PRO n 1 42 PHE n 1 43 GLN n 1 44 LEU n 1 45 PHE n 1 46 LEU n 1 47 SER n 1 48 LYS n 1 49 VAL n 1 50 GLU n 1 51 GLU n 1 52 THR n 1 53 PHE n 1 54 GLN n 1 55 CYS n 1 56 ILE n 1 57 CYS n 1 58 CYS n 1 59 GLN n 1 60 GLU n 1 61 LEU n 1 62 VAL n 1 63 PHE n 1 64 ARG n 1 65 PRO n 1 66 ILE n 1 67 THR n 1 68 THR n 1 69 VAL n 1 70 CYS n 1 71 GLN n 1 72 HIS n 1 73 ASN n 1 74 VAL n 1 75 CYS n 1 76 LYS n 1 77 ASP n 1 78 CYS n 1 79 LEU n 1 80 ASP n 1 81 ARG n 1 82 SER n 1 83 PHE n 1 84 ARG n 1 85 ALA n 1 86 GLN n 1 87 VAL n 1 88 PHE n 1 89 SER n 1 90 CYS n 1 91 PRO n 1 92 ALA n 1 93 CYS n 1 94 ARG n 1 95 TYR n 1 96 ASP n 1 97 LEU n 1 98 GLY n 1 99 ARG n 1 100 SER n 1 101 TYR n 1 102 ALA n 1 103 MET n 1 104 GLN n 1 105 VAL n 1 106 ASN n 1 107 GLN n 1 108 PRO n 1 109 LEU n 1 110 GLN n 1 111 THR n 1 112 VAL n 1 113 LEU n 1 114 ASN n 1 115 GLN n 1 116 LEU n 1 117 PHE n 1 118 PRO n 1 119 GLY n 1 120 TYR n 1 121 GLY n 1 122 ASN n 1 123 GLY n 1 124 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ICBP90, NP95, RNF106, UHRF1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28A-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UHRF1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRS FRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFPGYGNGR ; _struct_ref.pdbx_align_begin 672 _struct_ref.pdbx_db_accession Q96T88 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FL2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96T88 _struct_ref_seq.db_align_beg 672 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 793 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 672 _struct_ref_seq.pdbx_auth_seq_align_end 793 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FL2 GLY A 1 ? UNP Q96T88 ? ? 'expression tag' 670 1 1 3FL2 SER A 2 ? UNP Q96T88 ? ? 'expression tag' 671 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3FL2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_percent_sol 34.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '27% PEG MME 2000, 0.1 M TRIS-HCL, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2008-12-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54178 _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 3FL2 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.750 _reflns.number_obs 11019 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0400 _reflns.pdbx_netI_over_sigmaI 43.780 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.81 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.178 _reflns_shell.meanI_over_sigI_obs 10.761 _reflns_shell.pdbx_redundancy 5.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1068 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3FL2 _refine.ls_number_reflns_obs 10426 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.75 _refine.ls_percent_reflns_obs 99.84 _refine.ls_R_factor_obs 0.18654 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18340 _refine.ls_R_factor_R_free 0.24976 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 525 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.B_iso_mean 15.852 _refine.aniso_B[1][1] -1.94 _refine.aniso_B[2][2] 0.37 _refine.aniso_B[3][3] 1.56 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS, ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. ; _refine.pdbx_starting_model 1Z6U _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.130 _refine.pdbx_overall_ESU_R_Free 0.138 _refine.overall_SU_ML 0.081 _refine.overall_SU_B 4.655 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 907 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 1009 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 932 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.500 1.958 ? 1250 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.859 5.000 ? 114 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.206 24.091 ? 44 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.981 15.000 ? 155 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.983 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.098 0.200 ? 139 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 708 'X-RAY DIFFRACTION' ? r_mcbond_it 1.727 3.000 ? 580 'X-RAY DIFFRACTION' ? r_mcangle_it 2.419 4.000 ? 935 'X-RAY DIFFRACTION' ? r_scbond_it 3.951 5.000 ? 352 'X-RAY DIFFRACTION' ? r_scangle_it 5.665 7.000 ? 315 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.750 _refine_ls_shell.d_res_low 1.795 _refine_ls_shell.number_reflns_R_work 754 _refine_ls_shell.R_factor_R_work 0.193 _refine_ls_shell.percent_reflns_obs 99.87 _refine_ls_shell.R_factor_R_free 0.202 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FL2 _struct.title 'Crystal structure of the ring domain of the E3 ubiquitin-protein ligase UHRF1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FL2 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;CELL CYCLE, DNA DAMAGE, DNA REPAIR, RING FINGER DOMAIN, LIGASE, METAL BINDING, DNA REPLICATION, TRANSCRIPTIONAL SILENCING, CHROMATIN, PHOSPHORYLATION, TRANSCRIPTION, TRANSCRIPTION REGULATION, UBL CONJUGATION, UBL CONJUGATION PATHWAY, ZINC, ZINC-FINGER, EPIGENETICS, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 8 ? ASP A 18 ? THR A 677 ASP A 687 1 ? 11 HELX_P HELX_P2 2 ASN A 21 ? SER A 31 ? ASN A 690 SER A 700 1 ? 11 HELX_P HELX_P3 3 SER A 40 ? PHE A 53 ? SER A 709 PHE A 722 1 ? 14 HELX_P HELX_P4 4 LYS A 76 ? ALA A 85 ? LYS A 745 ALA A 754 1 ? 10 HELX_P HELX_P5 5 ASN A 106 ? PHE A 117 ? ASN A 775 PHE A 786 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 55 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 724 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc2 metalc ? ? A CYS 58 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 727 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc3 metalc ? ? A CYS 70 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 739 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc4 metalc ? ? A HIS 72 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 741 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc5 metalc ? ? A CYS 75 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 744 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.390 ? ? metalc6 metalc ? ? A CYS 78 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 747 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc7 metalc ? ? A CYS 90 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 759 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc8 metalc ? ? A CYS 93 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 762 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.345 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PRO A 65 ? THR A 67 ? PRO A 734 THR A 736 A 2 ASN A 73 ? CYS A 75 ? ASN A 742 CYS A 744 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 66 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 735 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 74 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 743 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A1001' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A1002' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 55 ? CYS A 724 . ? 1_555 ? 2 AC1 4 CYS A 58 ? CYS A 727 . ? 1_555 ? 3 AC1 4 CYS A 75 ? CYS A 744 . ? 1_555 ? 4 AC1 4 CYS A 78 ? CYS A 747 . ? 1_555 ? 5 AC2 4 CYS A 70 ? CYS A 739 . ? 1_555 ? 6 AC2 4 HIS A 72 ? HIS A 741 . ? 1_555 ? 7 AC2 4 CYS A 90 ? CYS A 759 . ? 1_555 ? 8 AC2 4 CYS A 93 ? CYS A 762 . ? 1_555 ? # _database_PDB_matrix.entry_id 3FL2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FL2 _atom_sites.fract_transf_matrix[1][1] 0.021865 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021315 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020657 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 670 ? ? ? A . n A 1 2 SER 2 671 ? ? ? A . n A 1 3 GLU 3 672 ? ? ? A . n A 1 4 PRO 4 673 ? ? ? A . n A 1 5 TYR 5 674 ? ? ? A . n A 1 6 SER 6 675 675 SER SER A . n A 1 7 LEU 7 676 676 LEU LEU A . n A 1 8 THR 8 677 677 THR THR A . n A 1 9 ALA 9 678 678 ALA ALA A . n A 1 10 GLN 10 679 679 GLN GLN A . n A 1 11 GLN 11 680 680 GLN GLN A . n A 1 12 SER 12 681 681 SER SER A . n A 1 13 SER 13 682 682 SER SER A . n A 1 14 LEU 14 683 683 LEU LEU A . n A 1 15 ILE 15 684 684 ILE ILE A . n A 1 16 ARG 16 685 685 ARG ARG A . n A 1 17 GLU 17 686 686 GLU GLU A . n A 1 18 ASP 18 687 687 ASP ASP A . n A 1 19 LYS 19 688 688 LYS LYS A . n A 1 20 SER 20 689 689 SER SER A . n A 1 21 ASN 21 690 690 ASN ASN A . n A 1 22 ALA 22 691 691 ALA ALA A . n A 1 23 LYS 23 692 692 LYS LYS A . n A 1 24 LEU 24 693 693 LEU LEU A . n A 1 25 TRP 25 694 694 TRP TRP A . n A 1 26 ASN 26 695 695 ASN ASN A . n A 1 27 GLU 27 696 696 GLU GLU A . n A 1 28 VAL 28 697 697 VAL VAL A . n A 1 29 LEU 29 698 698 LEU LEU A . n A 1 30 ALA 30 699 699 ALA ALA A . n A 1 31 SER 31 700 700 SER SER A . n A 1 32 LEU 32 701 ? ? ? A . n A 1 33 LYS 33 702 ? ? ? A . n A 1 34 ASP 34 703 ? ? ? A . n A 1 35 ARG 35 704 704 ARG ARG A . n A 1 36 PRO 36 705 705 PRO PRO A . n A 1 37 ALA 37 706 706 ALA ALA A . n A 1 38 SER 38 707 707 SER SER A . n A 1 39 GLY 39 708 708 GLY GLY A . n A 1 40 SER 40 709 709 SER SER A . n A 1 41 PRO 41 710 710 PRO PRO A . n A 1 42 PHE 42 711 711 PHE PHE A . n A 1 43 GLN 43 712 712 GLN GLN A . n A 1 44 LEU 44 713 713 LEU LEU A . n A 1 45 PHE 45 714 714 PHE PHE A . n A 1 46 LEU 46 715 715 LEU LEU A . n A 1 47 SER 47 716 716 SER SER A . n A 1 48 LYS 48 717 717 LYS LYS A . n A 1 49 VAL 49 718 718 VAL VAL A . n A 1 50 GLU 50 719 719 GLU GLU A . n A 1 51 GLU 51 720 720 GLU GLU A . n A 1 52 THR 52 721 721 THR THR A . n A 1 53 PHE 53 722 722 PHE PHE A . n A 1 54 GLN 54 723 723 GLN GLN A . n A 1 55 CYS 55 724 724 CYS CYS A . n A 1 56 ILE 56 725 725 ILE ILE A . n A 1 57 CYS 57 726 726 CYS CYS A . n A 1 58 CYS 58 727 727 CYS CYS A . n A 1 59 GLN 59 728 728 GLN GLN A . n A 1 60 GLU 60 729 729 GLU GLU A . n A 1 61 LEU 61 730 730 LEU LEU A . n A 1 62 VAL 62 731 731 VAL VAL A . n A 1 63 PHE 63 732 732 PHE PHE A . n A 1 64 ARG 64 733 733 ARG ARG A . n A 1 65 PRO 65 734 734 PRO PRO A . n A 1 66 ILE 66 735 735 ILE ILE A . n A 1 67 THR 67 736 736 THR THR A . n A 1 68 THR 68 737 737 THR THR A . n A 1 69 VAL 69 738 738 VAL VAL A . n A 1 70 CYS 70 739 739 CYS CYS A . n A 1 71 GLN 71 740 740 GLN GLN A . n A 1 72 HIS 72 741 741 HIS HIS A . n A 1 73 ASN 73 742 742 ASN ASN A . n A 1 74 VAL 74 743 743 VAL VAL A . n A 1 75 CYS 75 744 744 CYS CYS A . n A 1 76 LYS 76 745 745 LYS LYS A . n A 1 77 ASP 77 746 746 ASP ASP A . n A 1 78 CYS 78 747 747 CYS CYS A . n A 1 79 LEU 79 748 748 LEU LEU A . n A 1 80 ASP 80 749 749 ASP ASP A . n A 1 81 ARG 81 750 750 ARG ARG A . n A 1 82 SER 82 751 751 SER SER A . n A 1 83 PHE 83 752 752 PHE PHE A . n A 1 84 ARG 84 753 753 ARG ARG A . n A 1 85 ALA 85 754 754 ALA ALA A . n A 1 86 GLN 86 755 755 GLN GLN A . n A 1 87 VAL 87 756 756 VAL VAL A . n A 1 88 PHE 88 757 757 PHE PHE A . n A 1 89 SER 89 758 758 SER SER A . n A 1 90 CYS 90 759 759 CYS CYS A . n A 1 91 PRO 91 760 760 PRO PRO A . n A 1 92 ALA 92 761 761 ALA ALA A . n A 1 93 CYS 93 762 762 CYS CYS A . n A 1 94 ARG 94 763 763 ARG ARG A . n A 1 95 TYR 95 764 764 TYR TYR A . n A 1 96 ASP 96 765 765 ASP ASP A . n A 1 97 LEU 97 766 766 LEU LEU A . n A 1 98 GLY 98 767 767 GLY GLY A . n A 1 99 ARG 99 768 768 ARG ARG A . n A 1 100 SER 100 769 769 SER SER A . n A 1 101 TYR 101 770 770 TYR TYR A . n A 1 102 ALA 102 771 771 ALA ALA A . n A 1 103 MET 103 772 772 MET MET A . n A 1 104 GLN 104 773 773 GLN GLN A . n A 1 105 VAL 105 774 774 VAL VAL A . n A 1 106 ASN 106 775 775 ASN ASN A . n A 1 107 GLN 107 776 776 GLN GLN A . n A 1 108 PRO 108 777 777 PRO PRO A . n A 1 109 LEU 109 778 778 LEU LEU A . n A 1 110 GLN 110 779 779 GLN GLN A . n A 1 111 THR 111 780 780 THR THR A . n A 1 112 VAL 112 781 781 VAL VAL A . n A 1 113 LEU 113 782 782 LEU LEU A . n A 1 114 ASN 114 783 783 ASN ASN A . n A 1 115 GLN 115 784 784 GLN GLN A . n A 1 116 LEU 116 785 785 LEU LEU A . n A 1 117 PHE 117 786 786 PHE PHE A . n A 1 118 PRO 118 787 787 PRO PRO A . n A 1 119 GLY 119 788 788 GLY GLY A . n A 1 120 TYR 120 789 789 TYR TYR A . n A 1 121 GLY 121 790 790 GLY GLY A . n A 1 122 ASN 122 791 791 ASN ASN A . n A 1 123 GLY 123 792 792 GLY GLY A . n A 1 124 ARG 124 793 793 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1001 1001 ZN ZN A . C 2 ZN 1 1002 1002 ZN ZN A . D 3 HOH 1 1003 1003 HOH HOH A . D 3 HOH 2 1004 1004 HOH HOH A . D 3 HOH 3 1005 1005 HOH HOH A . D 3 HOH 4 1006 1006 HOH HOH A . D 3 HOH 5 1007 1007 HOH HOH A . D 3 HOH 6 1008 1008 HOH HOH A . D 3 HOH 7 1009 1009 HOH HOH A . D 3 HOH 8 1010 1010 HOH HOH A . D 3 HOH 9 1011 1011 HOH HOH A . D 3 HOH 10 1012 1012 HOH HOH A . D 3 HOH 11 1013 1013 HOH HOH A . D 3 HOH 12 1014 1014 HOH HOH A . D 3 HOH 13 1015 1015 HOH HOH A . D 3 HOH 14 1016 1016 HOH HOH A . D 3 HOH 15 1017 1017 HOH HOH A . D 3 HOH 16 1018 1018 HOH HOH A . D 3 HOH 17 1019 1019 HOH HOH A . D 3 HOH 18 1020 1020 HOH HOH A . D 3 HOH 19 1021 1021 HOH HOH A . D 3 HOH 20 1022 1022 HOH HOH A . D 3 HOH 21 1023 1023 HOH HOH A . D 3 HOH 22 1024 1024 HOH HOH A . D 3 HOH 23 1025 1025 HOH HOH A . D 3 HOH 24 1026 1026 HOH HOH A . D 3 HOH 25 1027 1027 HOH HOH A . D 3 HOH 26 1028 1028 HOH HOH A . D 3 HOH 27 1029 1029 HOH HOH A . D 3 HOH 28 1030 1030 HOH HOH A . D 3 HOH 29 1031 1031 HOH HOH A . D 3 HOH 30 1032 1032 HOH HOH A . D 3 HOH 31 1033 1033 HOH HOH A . D 3 HOH 32 1034 1034 HOH HOH A . D 3 HOH 33 1035 1035 HOH HOH A . D 3 HOH 34 1036 1036 HOH HOH A . D 3 HOH 35 1037 1037 HOH HOH A . D 3 HOH 36 1038 1038 HOH HOH A . D 3 HOH 37 1039 1039 HOH HOH A . D 3 HOH 38 1040 1040 HOH HOH A . D 3 HOH 39 1041 1041 HOH HOH A . D 3 HOH 40 1042 1042 HOH HOH A . D 3 HOH 41 1043 1043 HOH HOH A . D 3 HOH 42 1044 1044 HOH HOH A . D 3 HOH 43 1045 1045 HOH HOH A . D 3 HOH 44 1046 1046 HOH HOH A . D 3 HOH 45 1047 1047 HOH HOH A . D 3 HOH 46 1048 1048 HOH HOH A . D 3 HOH 47 1049 1049 HOH HOH A . D 3 HOH 48 1050 1050 HOH HOH A . D 3 HOH 49 1051 1051 HOH HOH A . D 3 HOH 50 1052 1052 HOH HOH A . D 3 HOH 51 1053 1053 HOH HOH A . D 3 HOH 52 1054 1054 HOH HOH A . D 3 HOH 53 1055 1055 HOH HOH A . D 3 HOH 54 1056 1056 HOH HOH A . D 3 HOH 55 1057 1057 HOH HOH A . D 3 HOH 56 1058 1058 HOH HOH A . D 3 HOH 57 1059 1059 HOH HOH A . D 3 HOH 58 1060 1060 HOH HOH A . D 3 HOH 59 1061 1061 HOH HOH A . D 3 HOH 60 1062 1062 HOH HOH A . D 3 HOH 61 1063 1063 HOH HOH A . D 3 HOH 62 1064 1064 HOH HOH A . D 3 HOH 63 1065 1065 HOH HOH A . D 3 HOH 64 1066 1066 HOH HOH A . D 3 HOH 65 1067 1067 HOH HOH A . D 3 HOH 66 1068 1068 HOH HOH A . D 3 HOH 67 1069 1069 HOH HOH A . D 3 HOH 68 1070 1070 HOH HOH A . D 3 HOH 69 1071 1071 HOH HOH A . D 3 HOH 70 1072 1072 HOH HOH A . D 3 HOH 71 1073 1073 HOH HOH A . D 3 HOH 72 1074 1074 HOH HOH A . D 3 HOH 73 1075 1075 HOH HOH A . D 3 HOH 74 1076 1076 HOH HOH A . D 3 HOH 75 1077 1077 HOH HOH A . D 3 HOH 76 1078 1078 HOH HOH A . D 3 HOH 77 1079 1079 HOH HOH A . D 3 HOH 78 1080 1080 HOH HOH A . D 3 HOH 79 1081 1081 HOH HOH A . D 3 HOH 80 1082 1082 HOH HOH A . D 3 HOH 81 1083 1083 HOH HOH A . D 3 HOH 82 1084 1084 HOH HOH A . D 3 HOH 83 1085 1085 HOH HOH A . D 3 HOH 84 1086 1086 HOH HOH A . D 3 HOH 85 1087 1087 HOH HOH A . D 3 HOH 86 1088 1088 HOH HOH A . D 3 HOH 87 1089 1089 HOH HOH A . D 3 HOH 88 1090 1090 HOH HOH A . D 3 HOH 89 1091 1091 HOH HOH A . D 3 HOH 90 1092 1092 HOH HOH A . D 3 HOH 91 1093 1093 HOH HOH A . D 3 HOH 92 1094 1094 HOH HOH A . D 3 HOH 93 1095 1095 HOH HOH A . D 3 HOH 94 1096 1096 HOH HOH A . D 3 HOH 95 1097 1097 HOH HOH A . D 3 HOH 96 1098 1098 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 55 ? A CYS 724 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 58 ? A CYS 727 ? 1_555 110.7 ? 2 SG ? A CYS 55 ? A CYS 724 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 75 ? A CYS 744 ? 1_555 102.9 ? 3 SG ? A CYS 58 ? A CYS 727 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 75 ? A CYS 744 ? 1_555 105.7 ? 4 SG ? A CYS 55 ? A CYS 724 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 78 ? A CYS 747 ? 1_555 114.0 ? 5 SG ? A CYS 58 ? A CYS 727 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 78 ? A CYS 747 ? 1_555 109.0 ? 6 SG ? A CYS 75 ? A CYS 744 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 SG ? A CYS 78 ? A CYS 747 ? 1_555 114.2 ? 7 SG ? A CYS 70 ? A CYS 739 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 ND1 ? A HIS 72 ? A HIS 741 ? 1_555 120.5 ? 8 SG ? A CYS 70 ? A CYS 739 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 90 ? A CYS 759 ? 1_555 103.0 ? 9 ND1 ? A HIS 72 ? A HIS 741 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 90 ? A CYS 759 ? 1_555 111.6 ? 10 SG ? A CYS 70 ? A CYS 739 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 93 ? A CYS 762 ? 1_555 103.0 ? 11 ND1 ? A HIS 72 ? A HIS 741 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 93 ? A CYS 762 ? 1_555 104.5 ? 12 SG ? A CYS 90 ? A CYS 759 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 SG ? A CYS 93 ? A CYS 762 ? 1_555 114.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 15.9815 15.2735 2.6265 0.2150 0.3401 0.2441 -0.0244 0.0119 -0.0850 0.2736 10.9231 20.7779 1.0348 -0.5350 -0.8833 -0.0945 0.1958 -0.1522 -0.2294 -0.0592 -0.1880 0.2276 0.3448 0.1536 'X-RAY DIFFRACTION' 2 ? refined 18.6760 21.7238 12.9025 0.1390 0.0978 0.1584 -0.0014 0.0004 0.0560 5.2810 4.4344 9.0049 0.5563 1.6003 -0.1472 -0.1344 0.4740 0.1745 -0.1597 -0.0413 0.2118 -0.3526 0.3543 0.1757 'X-RAY DIFFRACTION' 3 ? refined 26.0875 11.4813 5.8139 0.2630 0.2641 0.2518 0.0194 0.0216 0.0271 0.2923 5.0884 2.6207 -0.5320 -0.6331 3.4181 0.0267 -0.1010 0.0067 -0.2982 0.2274 -0.4159 -0.1849 0.2218 -0.2541 'X-RAY DIFFRACTION' 4 ? refined 23.4847 8.2038 14.2880 0.1461 0.1392 0.1774 0.0430 0.0326 0.0007 0.6879 1.3327 8.8535 -0.4589 -0.2636 1.4153 0.0704 0.0955 -0.0070 -0.1283 -0.1333 -0.1887 0.3080 0.1755 0.0629 'X-RAY DIFFRACTION' 5 ? refined 19.8315 5.2700 24.1930 0.1304 0.1375 0.1726 -0.0091 0.0194 -0.0017 6.0461 7.1059 20.4486 -1.4442 7.6894 -3.4873 0.2852 -0.0104 -0.5213 -0.0176 -0.1334 -0.2532 0.9210 0.4155 -0.1518 'X-RAY DIFFRACTION' 6 ? refined 17.4802 16.8317 25.3834 0.1105 0.0578 0.0899 0.0172 0.0338 -0.0155 8.3805 4.9709 1.5620 4.1290 3.2821 2.1504 0.0355 -0.1753 0.2693 0.0702 -0.0822 0.1596 -0.0055 -0.1398 0.0467 'X-RAY DIFFRACTION' 7 ? refined 18.9575 14.2293 26.7629 0.1106 0.1032 0.1100 0.0102 0.0050 -0.0067 7.9780 4.0860 1.2527 3.6333 -0.2954 -0.7881 -0.0435 -0.3345 0.1489 0.0923 -0.0205 -0.0724 0.0558 -0.0830 0.0640 'X-RAY DIFFRACTION' 8 ? refined 14.9907 10.2448 33.8324 0.1394 0.1446 0.1456 0.0047 0.0148 0.0073 9.9313 4.7459 16.3730 -0.6046 2.8428 1.7204 0.0799 -0.3412 -0.2355 0.2934 -0.1060 0.3882 0.3993 -0.6512 0.0261 'X-RAY DIFFRACTION' 9 ? refined 17.4188 13.6469 40.5327 0.1855 0.2267 0.1345 -0.0178 0.0159 -0.0267 5.0618 9.3367 11.9961 -0.5487 -4.0219 -5.0798 0.0018 -0.2175 -0.2011 -0.0124 -0.0507 0.4297 0.3891 -0.4409 0.0490 'X-RAY DIFFRACTION' 10 ? refined 25.3781 17.6341 34.3644 0.1278 0.1250 0.1317 -0.0089 0.0173 -0.0379 7.7393 4.1404 3.8305 -3.0225 -1.7065 -0.5675 0.0484 -0.4435 0.2658 0.2667 0.0787 -0.0038 -0.1884 -0.0217 -0.1271 'X-RAY DIFFRACTION' 11 ? refined 14.7845 21.4042 34.5975 0.1758 0.2042 0.2083 -0.0113 0.0244 0.0019 1.9233 6.5947 14.8664 -0.0140 -2.3100 2.5416 0.0206 -0.2141 -0.1944 0.0340 -0.0750 0.1266 0.3534 -0.4345 0.0544 'X-RAY DIFFRACTION' 12 ? refined 12.1475 16.5782 17.9303 0.0906 0.1042 0.1352 0.0240 0.0208 0.0139 2.2945 5.8722 9.8270 0.5351 2.6180 1.2095 -0.0291 -0.0030 0.1285 0.0664 -0.0039 0.2241 -0.2154 -0.3515 0.0329 'X-RAY DIFFRACTION' 13 ? refined 11.5590 6.5216 15.9121 0.1157 0.0810 0.1214 0.0134 -0.0014 -0.0327 7.1164 2.2881 2.4719 1.0416 -2.0197 0.3536 0.0034 0.2760 -0.2324 -0.1665 -0.0725 -0.0948 0.1458 0.0361 0.0690 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 675 ? ? A 680 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 681 ? ? A 693 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 694 ? ? A 711 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 712 ? ? A 725 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 726 ? ? A 731 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 732 ? ? A 740 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 741 ? ? A 745 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 746 ? ? A 751 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 752 ? ? A 757 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 758 ? ? A 767 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 768 ? ? A 773 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 774 ? ? A 781 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 A 782 ? ? A 793 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0063 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 704 ? CG ? A ARG 35 CG 2 1 Y 1 A ARG 704 ? CD ? A ARG 35 CD 3 1 Y 1 A ARG 704 ? NE ? A ARG 35 NE 4 1 Y 1 A ARG 704 ? CZ ? A ARG 35 CZ 5 1 Y 1 A ARG 704 ? NH1 ? A ARG 35 NH1 6 1 Y 1 A ARG 704 ? NH2 ? A ARG 35 NH2 7 1 Y 1 A GLN 773 ? CD ? A GLN 104 CD 8 1 Y 1 A GLN 773 ? OE1 ? A GLN 104 OE1 9 1 Y 1 A GLN 773 ? NE2 ? A GLN 104 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 670 ? A GLY 1 2 1 Y 1 A SER 671 ? A SER 2 3 1 Y 1 A GLU 672 ? A GLU 3 4 1 Y 1 A PRO 673 ? A PRO 4 5 1 Y 1 A TYR 674 ? A TYR 5 6 1 Y 1 A LEU 701 ? A LEU 32 7 1 Y 1 A LYS 702 ? A LYS 33 8 1 Y 1 A ASP 703 ? A ASP 34 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZN ZN ZN N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1Z6U _pdbx_initial_refinement_model.details ? #