HEADER CONTRACTILE PROTEIN 19-DEC-08 3FM7 TITLE QUATERNARY STRUCTURE OF DROSOPHILA MELANOGASTER IC/TCTEX-1/LC8; TITLE 2 ALLOSTERIC INTERACTIONS OF DYNEIN LIGHT CHAINS WITH DYNEIN TITLE 3 INTERMEDIATE CHAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN TCTEX-TYPE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TCTEX-1 PROTEIN HOMOLOG; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DYNEIN INTERMEDIATE CHAIN, CYTOSOLIC; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: IC, RESIDUES 109-135; COMPND 10 SYNONYM: DH IC, CYTOPLASMIC DYNEIN INTERMEDIATE CHAIN, PROTEIN SHORT COMPND 11 WING; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DYNEIN LIGHT CHAIN 1, CYTOPLASMIC; COMPND 15 CHAIN: E, F; COMPND 16 SYNONYM: 8 KDA DYNEIN LIGHT CHAIN, CUT UP PROTEIN; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DLC90F, TCTEX, CG12363; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15(DA); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 13 ORGANISM_COMMON: FRUIT FLY; SOURCE 14 ORGANISM_TAXID: 7227; SOURCE 15 GENE: SW, CDIC, DIC19B, CG18000; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET15(DA); SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 23 ORGANISM_COMMON: FRUIT FLY; SOURCE 24 ORGANISM_TAXID: 7227; SOURCE 25 GENE: CTP, CDLC1, DDLC1, CG6998; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PET15(DA) KEYWDS CYTOPLASMIC DYNEIN, LIGHT CHAIN TCTEX-1, TCTEX, LIGHT CHAIN 8, LC8, KEYWDS 2 INTERMEDIATE CHAIN, IC, DYNEIN CARGO ATTACHMENT COMPLEX, DYNEIN KEYWDS 3 LIGHT CHAIN, QUATERNARY STRUCTURE, DYNEIN, MICROTUBULE, MOTOR KEYWDS 4 PROTEIN, LYSOSOME, MEMBRANE, NUCLEUS, WD REPEAT, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.D.HALL,P.A.KARPLUS,E.J.BARBAR REVDAT 4 06-SEP-23 3FM7 1 REMARK REVDAT 3 13-JUL-11 3FM7 1 VERSN REVDAT 2 08-DEC-09 3FM7 1 JRNL REVDAT 1 15-SEP-09 3FM7 0 JRNL AUTH J.HALL,P.A.KARPLUS,E.BARBAR JRNL TITL MULTIVALENCY IN THE ASSEMBLY OF INTRINSICALLY DISORDERED JRNL TITL 2 DYNEIN INTERMEDIATE CHAIN. JRNL REF J.BIOL.CHEM. V. 284 33115 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19759397 JRNL DOI 10.1074/JBC.M109.048587 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 7873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 870 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 569 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3436 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.659 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.446 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 63.772 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3504 ; 0.000 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4750 ; 0.047 ; 1.928 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 425 ;12.168 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 161 ;43.536 ;25.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;25.725 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;23.513 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 538 ; 0.001 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2612 ; 0.000 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1719 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2355 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 123 ; 0.138 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.204 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2138 ;70.838 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3472 ;64.603 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1366 ; NULL ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1278 ; NULL ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 111 REMARK 3 ORIGIN FOR THE GROUP (A): -40.0423 -30.4297 -23.0169 REMARK 3 T TENSOR REMARK 3 T11: 0.3137 T22: 0.3587 REMARK 3 T33: 0.6920 T12: -0.1356 REMARK 3 T13: 0.3651 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 3.7734 L22: 0.7382 REMARK 3 L33: 2.5320 L12: -0.1180 REMARK 3 L13: -1.2783 L23: 0.2631 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: -0.8954 S13: -0.1257 REMARK 3 S21: 0.4253 S22: -0.1474 S23: 0.7006 REMARK 3 S31: 0.2200 S32: -0.2226 S33: 0.0757 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): -36.7222 -25.8500 -40.2563 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.2483 REMARK 3 T33: 0.2915 T12: 0.0728 REMARK 3 T13: -0.1238 T23: 0.0698 REMARK 3 L TENSOR REMARK 3 L11: 4.3645 L22: 4.9911 REMARK 3 L33: 2.7671 L12: 0.6101 REMARK 3 L13: -0.6242 L23: 1.0542 REMARK 3 S TENSOR REMARK 3 S11: -0.1150 S12: 0.1756 S13: 0.3279 REMARK 3 S21: -0.1344 S22: -0.0292 S23: 0.4617 REMARK 3 S31: -0.3007 S32: -0.3091 S33: 0.1441 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 109 C 135 REMARK 3 ORIGIN FOR THE GROUP (A): -33.7853 -49.9210 -35.1236 REMARK 3 T TENSOR REMARK 3 T11: 0.2219 T22: 0.2148 REMARK 3 T33: 0.2597 T12: -0.0064 REMARK 3 T13: 0.0394 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 2.1278 L22: 23.9938 REMARK 3 L33: 0.6889 L12: 6.8819 REMARK 3 L13: 1.0567 L23: 3.2970 REMARK 3 S TENSOR REMARK 3 S11: 0.2367 S12: -0.2125 S13: 0.3941 REMARK 3 S21: 0.5521 S22: -0.5618 S23: 0.8160 REMARK 3 S31: 0.0131 S32: -0.0187 S33: 0.3251 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 109 D 135 REMARK 3 ORIGIN FOR THE GROUP (A): -53.1914 -43.5205 -35.0054 REMARK 3 T TENSOR REMARK 3 T11: 0.2187 T22: 0.1960 REMARK 3 T33: 0.8677 T12: -0.0338 REMARK 3 T13: 0.1562 T23: -0.1127 REMARK 3 L TENSOR REMARK 3 L11: 1.3260 L22: 2.8079 REMARK 3 L33: 0.9245 L12: 1.8020 REMARK 3 L13: 1.0060 L23: 1.2249 REMARK 3 S TENSOR REMARK 3 S11: -0.2011 S12: -0.0676 S13: 0.9327 REMARK 3 S21: 0.1711 S22: -0.2838 S23: 1.5426 REMARK 3 S31: -0.1798 S32: -0.1615 S33: 0.4849 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 5 E 89 REMARK 3 ORIGIN FOR THE GROUP (A): -48.7318 -73.6662 -29.6696 REMARK 3 T TENSOR REMARK 3 T11: 0.3006 T22: 0.2203 REMARK 3 T33: 0.1825 T12: -0.0159 REMARK 3 T13: 0.0924 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 3.9752 L22: 2.7312 REMARK 3 L33: 2.8400 L12: 0.2708 REMARK 3 L13: -0.0198 L23: 0.7357 REMARK 3 S TENSOR REMARK 3 S11: 0.0283 S12: -0.2797 S13: -0.1255 REMARK 3 S21: 0.4030 S22: -0.0871 S23: -0.0849 REMARK 3 S31: 0.1628 S32: -0.0604 S33: 0.0588 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 5 F 89 REMARK 3 ORIGIN FOR THE GROUP (A): -52.7204 -71.2546 -49.7982 REMARK 3 T TENSOR REMARK 3 T11: 0.2016 T22: 0.3200 REMARK 3 T33: 0.1877 T12: -0.0001 REMARK 3 T13: 0.0507 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 3.3699 L22: 2.4311 REMARK 3 L33: 3.1471 L12: -0.0177 REMARK 3 L13: -0.0393 L23: 0.1217 REMARK 3 S TENSOR REMARK 3 S11: 0.0563 S12: 0.5733 S13: 0.0889 REMARK 3 S21: -0.4165 S22: 0.0371 S23: 0.1077 REMARK 3 S31: -0.0951 S32: -0.1706 S33: -0.0934 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FM7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050761. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .98 REMARK 200 MONOCHROMATOR : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8745 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 6.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : 0.53000 REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: CHAINS A AND F IN PDB STRUCTURE 2PG1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 8K, 100 MM SODIUM CACODYLATE, REMARK 280 200 MM CALCIUM ACETATE, PH 6.5, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.33333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.16667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 60.33333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.16667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ASP A 3 REMARK 465 SER A 4 REMARK 465 ARG A 5 REMARK 465 GLU A 6 REMARK 465 GLU A 7 REMARK 465 SER A 8 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ASP B 3 REMARK 465 SER B 4 REMARK 465 ARG B 5 REMARK 465 GLU B 6 REMARK 465 GLU B 7 REMARK 465 MET E 1 REMARK 465 SER E 2 REMARK 465 ASP E 3 REMARK 465 ARG E 4 REMARK 465 MET F 1 REMARK 465 SER F 2 REMARK 465 ASP F 3 REMARK 465 ARG F 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 9 CB CG CD OE1 NE2 REMARK 470 SER B 8 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 38 ND2 ASN C 119 1.69 REMARK 500 OD1 ASN B 38 ND2 ASN C 119 1.87 REMARK 500 CG ASN B 38 ND2 ASN C 119 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 11 88.66 -69.95 REMARK 500 THR A 25 -88.42 -102.87 REMARK 500 THR A 26 -158.68 -77.26 REMARK 500 ILE A 27 26.90 -68.71 REMARK 500 ASN A 30 -143.23 -97.22 REMARK 500 GLN A 56 81.36 18.94 REMARK 500 PRO A 58 23.97 -75.14 REMARK 500 GLN A 69 134.61 -18.32 REMARK 500 ASN A 85 40.20 -77.66 REMARK 500 ASP A 86 -36.96 -154.40 REMARK 500 ASN A 97 -142.35 -111.02 REMARK 500 GLN B 9 -155.76 -141.76 REMARK 500 ASP B 35 4.85 -67.55 REMARK 500 LYS B 36 -37.15 -134.69 REMARK 500 GLU B 46 15.19 -68.37 REMARK 500 TYR B 82 47.62 -141.77 REMARK 500 ASN B 97 -132.18 -118.95 REMARK 500 CYS B 102 137.18 -170.59 REMARK 500 GLN C 116 74.76 -109.52 REMARK 500 ALA C 117 -32.11 141.48 REMARK 500 PRO C 122 -165.78 -73.02 REMARK 500 LYS C 123 -30.54 -155.95 REMARK 500 GLU C 124 88.41 22.52 REMARK 500 THR C 125 134.84 -33.25 REMARK 500 LEU C 126 -177.03 -52.68 REMARK 500 VAL D 112 170.24 -54.79 REMARK 500 PRO D 122 -153.95 -51.06 REMARK 500 LYS D 123 -50.30 -167.73 REMARK 500 GLU D 124 96.29 56.49 REMARK 500 THR D 125 164.24 -47.28 REMARK 500 MET E 13 -177.26 108.57 REMARK 500 GLU E 15 -83.24 57.79 REMARK 500 THR E 26 -31.09 -38.90 REMARK 500 ASN E 51 138.29 77.21 REMARK 500 HIS E 72 41.50 -144.01 REMARK 500 LEU E 85 118.13 -168.40 REMARK 500 SER E 88 86.86 -166.94 REMARK 500 MET F 13 104.23 110.19 REMARK 500 SER F 14 49.71 124.08 REMARK 500 GLU F 15 -81.79 1.57 REMARK 500 GLU F 30 -31.77 -131.15 REMARK 500 ASN F 51 135.33 83.58 REMARK 500 HIS F 72 40.22 -143.08 REMARK 500 SER F 88 94.07 -165.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 33 HIS A 34 -149.12 REMARK 500 GLU B 96 ASN B 97 146.21 REMARK 500 ASN C 114 VAL C 115 52.83 REMARK 500 GLN C 116 ALA C 117 39.29 REMARK 500 ALA C 117 THR C 118 -137.47 REMARK 500 TYR D 113 ASN D 114 -145.95 REMARK 500 ASP E 12 MET E 13 -138.18 REMARK 500 MET E 13 SER E 14 -75.18 REMARK 500 ASP F 12 MET F 13 -138.52 REMARK 500 MET F 13 SER F 14 46.09 REMARK 500 GLU F 69 THR F 70 -149.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 3FM7 A 1 111 UNP Q94524 DYLT_DROME 1 111 DBREF 3FM7 B 1 111 UNP Q94524 DYLT_DROME 1 111 DBREF 3FM7 C 109 135 UNP Q24246 DYIN_DROME 109 135 DBREF 3FM7 D 109 135 UNP Q24246 DYIN_DROME 109 135 DBREF 3FM7 E 1 89 UNP Q24117 DYL1_DROME 1 89 DBREF 3FM7 F 1 89 UNP Q24117 DYL1_DROME 1 89 SEQRES 1 A 111 MET ASP ASP SER ARG GLU GLU SER GLN PHE ILE VAL ASP SEQRES 2 A 111 ASP VAL SER LYS THR ILE LYS GLU ALA ILE GLU THR THR SEQRES 3 A 111 ILE GLY GLY ASN ALA TYR GLN HIS ASP LYS VAL ASN ASN SEQRES 4 A 111 TRP THR GLY GLN VAL VAL GLU ASN CYS LEU THR VAL LEU SEQRES 5 A 111 THR LYS GLU GLN LYS PRO TYR LYS TYR ILE VAL THR ALA SEQRES 6 A 111 MET ILE MET GLN LYS ASN GLY ALA GLY LEU HIS THR ALA SEQRES 7 A 111 SER SER CYS TYR TRP ASN ASN ASP THR ASP GLY SER CYS SEQRES 8 A 111 THR VAL ARG TRP GLU ASN LYS THR MET TYR CYS ILE VAL SEQRES 9 A 111 SER VAL PHE GLY LEU ALA VAL SEQRES 1 B 111 MET ASP ASP SER ARG GLU GLU SER GLN PHE ILE VAL ASP SEQRES 2 B 111 ASP VAL SER LYS THR ILE LYS GLU ALA ILE GLU THR THR SEQRES 3 B 111 ILE GLY GLY ASN ALA TYR GLN HIS ASP LYS VAL ASN ASN SEQRES 4 B 111 TRP THR GLY GLN VAL VAL GLU ASN CYS LEU THR VAL LEU SEQRES 5 B 111 THR LYS GLU GLN LYS PRO TYR LYS TYR ILE VAL THR ALA SEQRES 6 B 111 MET ILE MET GLN LYS ASN GLY ALA GLY LEU HIS THR ALA SEQRES 7 B 111 SER SER CYS TYR TRP ASN ASN ASP THR ASP GLY SER CYS SEQRES 8 B 111 THR VAL ARG TRP GLU ASN LYS THR MET TYR CYS ILE VAL SEQRES 9 B 111 SER VAL PHE GLY LEU ALA VAL SEQRES 1 C 27 ASN LEU SER VAL TYR ASN VAL GLN ALA THR ASN ILE PRO SEQRES 2 C 27 PRO LYS GLU THR LEU VAL TYR THR LYS GLN THR GLN THR SEQRES 3 C 27 THR SEQRES 1 D 27 ASN LEU SER VAL TYR ASN VAL GLN ALA THR ASN ILE PRO SEQRES 2 D 27 PRO LYS GLU THR LEU VAL TYR THR LYS GLN THR GLN THR SEQRES 3 D 27 THR SEQRES 1 E 89 MET SER ASP ARG LYS ALA VAL ILE LYS ASN ALA ASP MET SEQRES 2 E 89 SER GLU GLU MET GLN GLN ASP ALA VAL ASP CYS ALA THR SEQRES 3 E 89 GLN ALA LEU GLU LYS TYR ASN ILE GLU LYS ASP ILE ALA SEQRES 4 E 89 ALA TYR ILE LYS LYS GLU PHE ASP LYS LYS TYR ASN PRO SEQRES 5 E 89 THR TRP HIS CYS ILE VAL GLY ARG ASN PHE GLY SER TYR SEQRES 6 E 89 VAL THR HIS GLU THR ARG HIS PHE ILE TYR PHE TYR LEU SEQRES 7 E 89 GLY GLN VAL ALA ILE LEU LEU PHE LYS SER GLY SEQRES 1 F 89 MET SER ASP ARG LYS ALA VAL ILE LYS ASN ALA ASP MET SEQRES 2 F 89 SER GLU GLU MET GLN GLN ASP ALA VAL ASP CYS ALA THR SEQRES 3 F 89 GLN ALA LEU GLU LYS TYR ASN ILE GLU LYS ASP ILE ALA SEQRES 4 F 89 ALA TYR ILE LYS LYS GLU PHE ASP LYS LYS TYR ASN PRO SEQRES 5 F 89 THR TRP HIS CYS ILE VAL GLY ARG ASN PHE GLY SER TYR SEQRES 6 F 89 VAL THR HIS GLU THR ARG HIS PHE ILE TYR PHE TYR LEU SEQRES 7 F 89 GLY GLN VAL ALA ILE LEU LEU PHE LYS SER GLY HELIX 1 1 ILE A 11 GLU A 21 1 11 HELIX 2 2 GLN A 33 ASP A 35 5 3 HELIX 3 3 LYS A 36 LYS A 54 1 19 HELIX 4 4 VAL B 12 ILE B 27 1 16 HELIX 5 5 GLN B 33 LEU B 49 1 17 HELIX 6 6 GLU E 15 TYR E 32 1 18 HELIX 7 7 ILE E 34 ASN E 51 1 18 HELIX 8 8 GLU F 15 TYR F 32 1 18 HELIX 9 9 ILE F 34 TYR F 50 1 17 SHEET 1 A 4 GLY A 89 GLU A 96 0 SHEET 2 A 4 MET A 100 LEU A 109 -1 O VAL A 104 N VAL A 93 SHEET 3 A 4 LYS A 60 GLN A 69 -1 N ILE A 62 O PHE A 107 SHEET 4 A 4 SER B 79 CYS B 81 -1 O SER B 80 N VAL A 63 SHEET 1 B 5 GLY A 89 GLU A 96 0 SHEET 2 B 5 MET A 100 LEU A 109 -1 O VAL A 104 N VAL A 93 SHEET 3 B 5 LYS A 60 GLN A 69 -1 N ILE A 62 O PHE A 107 SHEET 4 B 5 LEU B 75 HIS B 76 -1 O HIS B 76 N ILE A 67 SHEET 5 B 5 ASN D 119 ILE D 120 -1 O ILE D 120 N LEU B 75 SHEET 1 C 5 GLY B 89 ARG B 94 0 SHEET 2 C 5 MET B 100 ALA B 110 -1 O VAL B 106 N CYS B 91 SHEET 3 C 5 TYR B 59 GLN B 69 -1 N LYS B 60 O LEU B 109 SHEET 4 C 5 SER A 79 ASN A 84 -1 N TYR A 82 O TYR B 61 SHEET 5 C 5 LEU C 110 VAL C 112 -1 O SER C 111 N TRP A 83 SHEET 1 D 5 GLY B 89 ARG B 94 0 SHEET 2 D 5 MET B 100 ALA B 110 -1 O VAL B 106 N CYS B 91 SHEET 3 D 5 TYR B 59 GLN B 69 -1 N LYS B 60 O LEU B 109 SHEET 4 D 5 LEU A 75 HIS A 76 -1 N HIS A 76 O ILE B 67 SHEET 5 D 5 ASN C 119 ILE C 120 -1 O ILE C 120 N LEU A 75 SHEET 1 E 6 TYR C 128 GLN C 133 0 SHEET 2 E 6 TRP E 54 HIS E 68 -1 O SER E 64 N THR C 132 SHEET 3 E 6 TRP F 54 HIS F 68 -1 O GLY F 63 N VAL E 58 SHEET 4 E 6 VAL E 81 LYS E 87 0 SHEET 5 E 6 PHE E 73 LEU E 78 -1 N PHE E 76 O ILE E 83 SHEET 6 E 6 ALA E 6 ASP E 12 -1 N ASP E 12 O PHE E 73 SHEET 1 F 6 TYR D 128 GLN D 133 0 SHEET 2 F 6 TRP F 54 HIS F 68 -1 O VAL F 66 N LYS D 130 SHEET 3 F 6 TRP E 54 HIS E 68 -1 N VAL E 58 O GLY F 63 SHEET 4 F 6 VAL F 81 LYS F 87 0 SHEET 5 F 6 PHE F 73 LEU F 78 -1 N PHE F 76 O ILE F 83 SHEET 6 F 6 ALA F 6 ASP F 12 -1 N ASP F 12 O PHE F 73 CISPEP 1 PRO E 52 THR E 53 0 -16.66 CISPEP 2 PRO F 52 THR F 53 0 17.51 CRYST1 115.790 115.790 90.500 90.00 90.00 120.00 P 62 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008636 0.004986 0.000000 0.00000 SCALE2 0.000000 0.009972 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011050 0.00000